Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I2 R1
|
70 |
105.0 |
5244496 |
94.3% |
4945559 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
638,455 |
(G)5→6 |
coding (119/747 nt) |
dsbG ← |
thiol:disulfide interchange protein, periplasmic |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 638,450 | 1 | . | G | 91.9%
| 232.3
/ 15.5
| 74 | coding (124/747 nt) | dsbG | thiol:disulfide interchange protein, periplasmic |
| Reads supporting (aligned to +/- strand): ref base . (2/4); new base G (37/31); total (39/35) |
| Fisher's exact test for biased strand distribution p-value = 4.13e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGTTGTACATGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑GGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGATTGCAGGAAGCAGAG > NC_000913/638351‑638548
|
cGTTGTACATGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATtcct‑c‑c > 2:1432088/1‑100 (MQ=255)
gTTGTACATGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑g > 2:759760/1‑100 (MQ=255)
ttGTACATGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑gg > 1:2044226/1‑100 (MQ=255)
gTACATGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑ggg‑g < 1:1271281/100‑1 (MQ=255)
gTACATGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑ggg‑g > 2:215489/1‑100 (MQ=255)
aCATGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑ggg‑ggg < 2:678046/100‑2 (MQ=255)
aTGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑ggg‑gggca < 1:1225299/100‑4 (MQ=255)
tGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑ggg‑gggcat > 1:1762864/1‑96 (MQ=255)
tGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑ggg‑gggcat > 1:1825809/1‑96 (MQ=255)
aaCCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGa > 2:1943272/1‑100 (MQ=255)
ccAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAAt > 1:867647/1‑100 (MQ=255)
ccAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAAt > 1:867610/1‑100 (MQ=255)
agagATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGt < 2:1433652/100‑1 (MQ=255)
agaTAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGttt > 1:290404/1‑100 (MQ=255)
gaTAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCAGATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAAAGtttt > 1:2503199/1‑100 (MQ=255)
tAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CCTCGAATATTTtga > 1:2584737/1‑100 (MQ=255)
aGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTtgat > 2:651049/1‑100 (MQ=255)
gCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTtgatg > 1:1821893/1‑100 (MQ=255)
cGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTtgatga > 2:1398446/1‑100 (MQ=255)
gTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTgatgat < 1:2134620/100‑1 (MQ=255)
gCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTg > 2:419423/1‑100 (MQ=255)
gCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTg < 2:212689/100‑1 (MQ=255)
gCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTg < 2:342358/100‑1 (MQ=255)
cTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGt > 2:306272/1‑100 (MQ=255)
tACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTaa > 2:124470/1‑100 (MQ=255)
tACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTaa < 1:1294692/100‑1 (MQ=255)
aCCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAAt < 1:1452268/100‑1 (MQ=255)
ccATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATg > 1:1784413/1‑100 (MQ=255)
cTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCt > 2:2485387/1‑100 (MQ=255)
tGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTg > 2:951348/1‑100 (MQ=255)
ggAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGt > 1:2539228/1‑100 (MQ=255)
cAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTc < 1:351969/100‑1 (MQ=255)
cAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTc < 1:2590283/100‑1 (MQ=255)
cAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTc > 2:1159153/1‑100 (MQ=255)
ggTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTcta > 2:24053/1‑98 (MQ=255)
ggTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCaa < 2:775906/100‑1 (MQ=255)
ggTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCaa > 1:1503653/1‑100 (MQ=255)
ggTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCaa > 1:2039366/1‑100 (MQ=255)
gTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAAt < 1:691726/100‑1 (MQ=255)
gTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAAt > 1:808666/1‑100 (MQ=255)
tAGATGCTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATc < 2:319684/100‑1 (MQ=255)
aGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑CTG‑GGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCg > 1:1463820/1‑100 (MQ=255)
aGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCg < 1:312596/100‑1 (MQ=255)
ggTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCttt > 2:1272297/1‑100 (MQ=255)
tGACGCCCTTATCCTGATACTTTCCGCGATAACCTTTCATTCCT‑C‑C‑GGGAGG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTa > 2:2492915/1‑100 (MQ=255)
tGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTa > 1:8356/1‑100 (MQ=255)
tgCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTg < 1:2643733/99‑1 (MQ=255)
cGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTg < 1:1663156/100‑1 (MQ=255)
cGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTg < 1:80511/100‑1 (MQ=255)
gCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTgg < 2:2577151/100‑1 (MQ=255)
cccATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑GGG‑GGTCATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGa < 2:1178839/100‑1 (MQ=255)
ccATATCCTGATACTTTCCGAGATAACCTTTCCTTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAg < 2:922348/100‑1 (MQ=255)
cATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGc < 2:1162799/100‑1 (MQ=255)
cATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGc > 1:1709878/1‑100 (MQ=255)
cATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGc > 1:2563306/1‑100 (MQ=255)
tatCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAg < 1:1147553/100‑1 (MQ=255)
atCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAgg < 1:265166/100‑1 (MQ=255)
tCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGa < 2:827353/100‑1 (MQ=255)
tCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGa < 1:1285455/100‑1 (MQ=255)
tCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGa > 1:724286/1‑100 (MQ=255)
ccTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGaa < 2:1686737/100‑1 (MQ=255)
cTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTTTTTTTTTTTTACTGGAGCAGGAAg > 2:1050478/1‑100 (MQ=255)
cTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTTTTTCTTTTTTTCTGGAGCAGGAAg > 2:308510/1‑100 (MQ=255)
tGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGt < 1:572078/100‑1 (MQ=255)
tGATACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGt > 2:1650694/1‑100 (MQ=255)
tACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGTATGTTTTCATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTcc > 2:1907748/1‑100 (MQ=255)
tACTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTcc < 2:1477946/100‑1 (MQ=255)
cTTTCCGAGATAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGCGCAGGAAGTTCctc > 2:780552/1‑100 (MQ=255)
cGAGATTACCTGTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTCATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGa > 2:2504705/1‑100 (MQ=255)
agaTAACCTTTCATTCCTGC‑C‑GGG‑GG‑CATCGAATGTTTTTATGATCGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTCCCTCTGCGAAg < 1:2471142/100‑1 (MQ=255)
agaTAACCTTTCATTCCTAC‑T‑GGC‑GG‑CATCGAATGTTTTCATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTACCTCTGCGAAg < 1:2470827/100‑1 (MQ=255)
aTAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGc < 2:1319600/100‑1 (MQ=255)
tAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCg < 2:1911770/100‑1 (MQ=255)
tAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCg < 2:1911760/100‑1 (MQ=255)
tAACCTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCg > 1:1956165/1‑100 (MQ=255)
tAACCTTTCATCCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCg > 2:666675/1‑100 (MQ=255)
ccTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTTTTTTTTTTTTACTGGAGAAGGAGGTTCCTCTGCCAAGGCGAtt > 2:600752/1‑100 (MQ=255)
ccTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCTATTTTTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGAtt > 2:444389/1‑100 (MQ=255)
ccTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGAtt < 1:334898/100‑1 (MQ=255)
ccTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGAtt < 1:335726/100‑1 (MQ=255)
ccTTTCATTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGAtt < 1:639612/100‑1 (MQ=255)
ccTTTCATTCCT‑C‑C‑GGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGATTg < 1:243106/100‑1 (MQ=255)
aTTCCT‑C‑CGGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGATTGCAGGa > 1:580192/1‑100 (MQ=255)
tcct‑c‑cgGGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGATTGCAGGAAg < 2:992062/100‑1 (MQ=255)
c‑c‑GGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTTATTTTCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGTTTGCCGGAAGCagag > 2:871706/1‑100 (MQ=255)
|
CGTTGTACATGTAACCAGAGATAGCGTGCTTACCATCTGGAGTCAGGTAGATGGTGACGCCCATATCCTGATACTTTCCGAGATAACCTTTCATTCCT‑C‑C‑GGG‑GG‑CATCGAATGTTTTGATGATTGTAATGCCCTGTTTTTCAATCGCTTTTACTGGAGCAGGAAGTTCCTCTGCGAAGGCGATTGCAGGAAGCAGAG > NC_000913/638351‑638548
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
