Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I2 R1
|
70 |
105.0 |
5244496 |
94.3% |
4945559 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,136,037 |
C→T |
intergenic (+22/‑71) |
katG → / → yijE |
catalase‑peroxidase HPI, heme b‑containing/EamA‑like transporter family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,136,037 | 0 | C | T | 99.1%
| 351.3
/ ‑4.6
| 107 | intergenic (+22/‑71) | katG/yijE | catalase‑peroxidase HPI, heme b‑containing/EamA‑like transporter family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (48/57); total (49/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.41e-01 |
Only 100 of 116 total aligned reads displayed.
CACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCC > NC_000913/4135941‑4136133
|
cACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCtgtttg > 1:6830/1‑100 (MQ=255)
aCGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCtgtttgc < 2:534527/100‑1 (MQ=255)
cGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCtgcttgct > 2:1419957/1‑100 (MQ=255)
cGAGAAGTTTGTTAAAGACTGCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCtgtttgct < 2:43500/100‑1 (MQ=255)
gagaAGTTTGTTAAAGACTCCGTGGCGGCATGGGAGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTATTCTGGCCCCGTTCAGCGGCTGTTTGCTg < 2:12371/100‑1 (MQ=255)
agaAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTgg > 1:1815261/1‑100 (MQ=255)
gaAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGc < 1:1166479/100‑1 (MQ=255)
gTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGAGCCCGTTCAGCGGCTGTTTGCTGGCAGt > 2:20990/1‑100 (MQ=255)
gTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGt > 2:81333/1‑100 (MQ=255)
gTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGt > 2:607010/1‑100 (MQ=255)
tGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGc < 1:625676/100‑1 (MQ=255)
gTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCt < 2:397015/100‑1 (MQ=255)
gTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCt < 2:397214/100‑1 (MQ=255)
gTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAACCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCt < 2:2462756/100‑1 (MQ=255)
ttAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGGCCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTg < 2:2458539/100‑1 (MQ=255)
ttAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTg < 1:1724600/100‑1 (MQ=255)
ttAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTg > 1:116257/1‑100 (MQ=255)
tAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGa < 1:1012288/100‑1 (MQ=255)
aaaGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGaa > 1:1868239/1‑100 (MQ=255)
aaaGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTGTCGACCTGCTGTATTCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGaa < 2:2435049/100‑1 (MQ=255)
aaGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAAc > 2:2135985/1‑100 (MQ=255)
aCTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGtn < 1:2105160/100‑2 (MQ=255)
cTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTc < 1:1906277/100‑1 (MQ=255)
ttCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCt < 2:2511943/100‑1 (MQ=255)
tCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCtt > 1:565872/1‑100 (MQ=255)
cGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTCCTGTCAGTCGCTGAACGTACttt > 1:2235113/1‑100 (MQ=255)
gTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTa < 2:2325438/100‑1 (MQ=255)
gTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTa > 2:1591659/1‑100 (MQ=255)
tGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTAc < 2:596575/100‑1 (MQ=255)
ggcggcATGGGTGGAAGTGATGAACCTCGACCGTTTCGACCTACTGGAATCGGACCCCGTTCAGCGGCGGTTTGCTGGGAGTCGCGGAACGTTCTTTAcc > 1:1082255/1‑100 (MQ=255)
ggcggcAGGGGTGAAAGTGATGAACCTCGACCGTTCCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTCCTGGCAGTCGCTGAACGTTCTTTAcc > 2:2018222/1‑100 (MQ=255)
gcATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCg < 1:619525/100‑1 (MQ=255)
gcATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCg < 1:1480044/100‑1 (MQ=255)
cATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGt > 1:2162849/1‑100 (MQ=255)
cATGGGGGAGAGGGATGAACCGCGGTCTGTTCTGCCTTCTGTAATCTGACGCCGTTCAGCCGCGTTGTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGt < 2:2095412/100‑1 (MQ=255)
aTGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGta < 1:1006282/100‑1 (MQ=255)
aTGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGta < 1:1490651/100‑1 (MQ=255)
tGGGTGAAAGTGATGAACCTCGACCGGTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGtat < 2:1486481/100‑1 (MQ=255)
ggTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAg > 1:694089/1‑100 (MQ=255)
ggTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAg > 2:1245927/1‑100 (MQ=255)
aaGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGc < 1:22635/100‑1 (MQ=255)
aaGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGc < 1:809461/100‑1 (MQ=255)
aaGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGc > 2:2306599/1‑100 (MQ=255)
aaGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGACTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGc < 1:2361354/100‑1 (MQ=255)
aGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGcg < 2:914128/100‑1 (MQ=255)
gatgaACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGcgaac < 2:951341/100‑1 (MQ=255)
gatgaACCCCGACAGATTCGACCTGCTGTAATCTGACCCAGTTCAGTGGCTGTTCGCTGGCCGTCGCTGAACGTTCTTTACCAGCGTATAGTGGAcgaac > 2:578488/1‑100 (MQ=255)
atgaACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGcgaacn < 1:2095040/100‑2 (MQ=255)
ccTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAAc > 1:2054318/1‑100 (MQ=255)
ccTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAAc > 2:1545756/1‑100 (MQ=255)
ccTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAAc < 2:1543005/100‑1 (MQ=255)
cTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACt > 1:785325/1‑100 (MQ=255)
cTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACt > 2:2291559/1‑100 (MQ=255)
cGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTac < 1:1995532/100‑1 (MQ=255)
aCCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTacac < 1:1439983/100‑1 (MQ=255)
tttCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTg > 1:621757/1‑100 (MQ=255)
ttCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTgg < 1:607630/100‑1 (MQ=255)
gACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtc < 2:2000669/100‑1 (MQ=255)
gACCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtc > 2:1523707/1‑100 (MQ=255)
aCCTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtct < 1:768720/100‑1 (MQ=255)
ccTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtctc < 2:783647/100‑1 (MQ=255)
ccTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtctc > 2:524616/1‑100 (MQ=255)
ccTGCTGTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtctc > 2:524584/1‑100 (MQ=255)
ctgctgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGAtctct > 2:1554228/1‑100 (MQ=255)
ctgctgTAATCTGACCCCGTTCAGCGGCAGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGAGAACTAAAACTACACACTGGAtctct > 2:1223892/1‑100 (MQ=255)
tgctgTAATCTGACCCCGTTCAGCGGCTGATTGCTGGCATTCGCTGAACGTTCTTTACCAGCGTAAAGTGGGCGAACGAAAACTACACACTGGAtctcac > 2:1414245/1‑98 (MQ=255)
gctgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCa > 1:422151/1‑100 (MQ=255)
gctgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCa > 1:660601/1‑100 (MQ=255)
ctgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCAt > 2:2005/1‑100 (MQ=255)
ctgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCAt < 1:2337832/100‑1 (MQ=255)
tgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTTTAGTGGGCTAACGAAAACTACACACTGGATCTCTCATg < 2:498949/100‑1 (MQ=255)
tgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATg < 1:1613795/100‑1 (MQ=255)
tgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATg < 1:1589105/100‑1 (MQ=255)
tgTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATg < 1:2284247/100‑1 (MQ=255)
gTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGt > 1:2388289/1‑100 (MQ=255)
gTAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGt > 2:1679630/1‑100 (MQ=255)
tAATCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTc < 2:35345/100‑1 (MQ=255)
aTCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTg > 1:1686963/1‑100 (MQ=255)
aTCTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTg > 1:1873609/1‑100 (MQ=255)
cTGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGcc > 1:1512478/1‑100 (MQ=255)
cTGACCCCGTGCAGCGGTTGTTTGCGGGCAGGCGCAGTACGGTCTTCGCCAGCGTATAGTGGGCTATCGAATAATACACTCTGGATCTCTCATGTCTGcc < 2:1701267/100‑1 (MQ=255)
tGACCCCGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCg < 1:1971782/100‑1 (MQ=255)
ccccGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAg > 1:904413/1‑100 (MQ=255)
ccccGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAg < 2:1923993/100‑1 (MQ=255)
cccGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAgg > 1:1801763/1‑100 (MQ=255)
cccGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAgg < 1:2051977/100‑1 (MQ=255)
cccGTTCAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAgg < 1:1264317/100‑1 (MQ=255)
cAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAagag > 1:91656/1‑100 (MQ=255)
cAGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAagag > 2:1634835/1‑100 (MQ=255)
aGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGc < 1:2219263/100‑1 (MQ=255)
aGCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGc > 1:464582/1‑100 (MQ=255)
gCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCa < 1:1971181/100‑1 (MQ=255)
gCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCa < 2:1777644/100‑1 (MQ=255)
gCGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCa > 2:2451394/1‑100 (MQ=255)
cGGCTGTTTGCTGGCAGTCGCTGCACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGGAAGAGCaa < 2:91000/100‑1 (MQ=255)
cGGCTGTTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCaa < 2:90882/100‑1 (MQ=255)
ggCTGTTTGCTGGCAGTCGCTGAACGTCCTTTACCAGCGTATAGTGGGCGAACGAAAACTACCCACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAAc < 2:1179000/100‑1 (MQ=255)
gctgttTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAAcc < 1:1019669/100‑1 (MQ=255)
gctgttTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAAcc > 1:2422589/1‑100 (MQ=255)
ctgttTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAAccc < 2:1763756/100‑1 (MQ=255)
|
CACGAGAAGTTTGTTAAAGACTTCGTGGCGGCATGGGTGAAAGTGATGAACCTCGACCGTTTCGACCTGCTGTAATCTGACCCCGTTCAGCGGCTGCTTGCTGGCAGTCGCTGAACGTTCTTTACCAGCGTATAGTGGGCGAACGAAAACTACACACTGGATCTCTCATGTCTGCCGCAGGAAAGAGCAACCC > NC_000913/4135941‑4136133
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
