Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I2 R1
|
70 |
105.0 |
5244496 |
94.3% |
4945559 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,397,649 |
Δ1 bp |
coding (238/1848 nt) |
mutL → |
methyl‑directed mismatch repair protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,397,646 | 0 | A | . | 98.7%
| 359.5
/ ‑0.2
| 79 | coding (235/1848 nt) | mutL | methyl‑directed mismatch repair protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base . (30/47); total (32/47) |
| Fisher's exact test for biased strand distribution p-value = 3.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTCACTT > NC_000913/4397547‑4397745
|
atCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTa > 2:1365834/1‑100 (MQ=255)
atCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTa > 1:460337/1‑100 (MQ=255)
atCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTAATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGGCCTGCCACCAGTa > 2:1262303/1‑100 (MQ=255)
atCGAACGCGGCGGGGCGAAACTTATCCGCATTCGTGATATCGGCTGCGGTATCAAAAAAGATGAGCTGGCGGTGGCGCTGGCTCGGCATGCCACCAGTa < 1:2329576/100‑1 (MQ=255)
tCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTaa > 2:788245/1‑100 (MQ=255)
tCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTaa > 2:1148377/1‑100 (MQ=255)
cgcgGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTaaatcgc < 2:1051891/100‑5 (MQ=255)
gcgGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGcc < 2:2536883/100‑1 (MQ=255)
tGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCctctc > 1:2361684/1‑100 (MQ=255)
ggCGAAACTTATCTGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTgg < 2:2038617/100‑1 (MQ=255)
ggCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTgg < 1:89152/100‑1 (MQ=255)
gCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGa > 1:11168/1‑100 (MQ=255)
cGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGAc < 1:1042806/100‑1 (MQ=255)
cGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGAc > 2:831429/1‑100 (MQ=255)
cGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGAc < 2:1537893/100‑1 (MQ=255)
cGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGAc < 1:1706893/100‑1 (MQ=255)
gAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACg < 1:608753/100‑1 (MQ=255)
aaaCTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGCGCTGGCGCTGGCGCAGGCTCGGCATCCAGCCAGGAAAA‑AGCCTCTCGGGACGa > 2:1705424/1‑100 (MQ=255)
cTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGAtct > 1:322008/1‑100 (MQ=255)
cTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGAtct > 2:1019938/1‑100 (MQ=255)
ttATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGAtctc > 1:1296813/1‑100 (MQ=255)
tATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCg > 1:1780896/1‑100 (MQ=255)
tATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCg > 1:213489/1‑100 (MQ=255)
ccGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGGCGATCTCGAAg > 2:1043558/1‑100 (MQ=255)
cGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGc < 1:1808028/100‑1 (MQ=255)
cGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAG‑CAAATCGCCTTCCTGGTCGATCTCGaatc > 2:775636/1‑98 (MQ=255)
gCATTCGTGATAACGGCTGCGGTATCAAAACAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGcc < 2:2061853/100‑1 (MQ=255)
gCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGcc < 2:1876182/100‑1 (MQ=255)
gCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGcc < 2:2061590/100‑1 (MQ=255)
gCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGcc > 1:427790/1‑100 (MQ=255)
aTTCGTGATCACGGCTGCGGTATCAAAAAAGATGAGCTGGCGGTGGCGCTGGCTCGTCATGCCACCAGT‑GAATCGCCTCTCTGGGCGATCTCGAAGCCAt < 1:2299748/100‑1 (MQ=255)
gTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATc > 2:2469751/1‑100 (MQ=255)
gTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATc > 1:1088166/1‑100 (MQ=255)
gATAACGGCTGCGGTCTCAACAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATAGCGCAGCCATTATCAg > 2:153668/1‑100 (MQ=255)
aTAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGc < 1:731465/100‑1 (MQ=255)
cGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTgg < 1:445880/100‑1 (MQ=255)
ggCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AACTCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTggg < 2:2319949/100‑1 (MQ=255)
ggCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTggg > 1:1143487/1‑100 (MQ=255)
ggCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTggg < 1:1018789/100‑1 (MQ=255)
gCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGc > 1:1043646/1‑100 (MQ=255)
gCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTAGACGATCTCGAAGCCATTCTCAGCCTGGGc > 1:1315953/1‑100 (MQ=255)
cTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCACTATGGACGATCTCGACGCCATCAACAGCCTCGGca > 1:2639734/1‑99 (MQ=255)
gCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCttt < 1:2159743/100‑1 (MQ=255)
gTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTcgc < 1:1519283/100‑1 (MQ=255)
gTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTcgc < 1:1265837/100‑1 (MQ=255)
gTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTcgc < 2:463075/100‑1 (MQ=255)
aTCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCgg < 2:1076093/100‑1 (MQ=255)
aTCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCgg < 2:322258/100‑1 (MQ=255)
cAAAAAAGCTGAGGTGGCGATGGCCCTGGCTTGTCATGCCACCAGT‑AAATCGCCTCTCGGGAGGAGCTCGTAGCCTGTATTAGCCTGTGCTCTCggggag > 2:662128/1‑98 (MQ=255)
cAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTg > 1:1352838/1‑100 (MQ=255)
cAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTg > 1:1913874/1‑100 (MQ=255)
aaaaaaGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGa < 1:926921/100‑1 (MQ=255)
aaaaaGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAg < 1:1170365/100‑1 (MQ=255)
aaaaGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAgg < 2:1904588/100‑1 (MQ=255)
tGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGGCGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTgg > 1:69442/1‑100 (MQ=255)
gAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGc > 1:1464734/1‑100 (MQ=255)
gAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGc > 1:872820/1‑100 (MQ=255)
aGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCg < 2:1710677/100‑1 (MQ=255)
aGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCg < 1:46488/100‑1 (MQ=255)
ctggcgctggcgctggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAg < 1:1560593/100‑1 (MQ=255)
ctggcgctggcgctggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAg < 2:1393219/100‑1 (MQ=255)
ggcgctggcgctggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTa > 2:1569475/1‑100 (MQ=255)
gcggtggcgctggcGCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCCGTGAGGCGCTGGCGAGTAt < 2:2371250/100‑1 (MQ=255)
gcgctggcggtggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTAt < 1:986193/100‑1 (MQ=255)
cgctggcgctggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATc < 2:1005108/100‑1 (MQ=255)
tggcgctggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGt < 2:1071450/100‑1 (MQ=255)
cgctggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCg > 1:1733686/1‑100 (MQ=255)
gctggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCgg < 2:1310611/100‑1 (MQ=255)
ggcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGttt > 1:776189/1‑100 (MQ=255)
gcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTc > 1:1244957/1‑100 (MQ=255)
gcTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTc < 1:2128915/100‑1 (MQ=255)
cTCGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTcc < 2:399031/100‑1 (MQ=255)
cGTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCg < 1:2047006/100‑1 (MQ=255)
gTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGGAGCCATTATCATCCCGGGCATACCCGGGGGGGCGCCGGCGAATATCAGTTCGGTTTCCCGc > 2:1604223/1‑100 (MQ=255)
gTCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGc > 2:538866/1‑100 (MQ=255)
ctCATGCCACCAGT‑ACATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCCGGGCTTCCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGc < 2:1143672/99‑1 (MQ=255)
tCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGcc < 2:2060234/100‑1 (MQ=255)
tCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGcc < 1:1879017/100‑1 (MQ=255)
tCATGCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGcc < 1:716871/100‑1 (MQ=255)
gCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGAc < 1:1297151/100‑1 (MQ=255)
gCCACCAGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGAc < 1:277407/100‑1 (MQ=255)
gCCACCAGT‑AAATCGCCTCTCTGGACGATCTCCAAGCCGTTATCAGGCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCGGTTCGGTTTCCCGCCTGAc > 1:2345903/1‑100 (MQ=255)
ccaccaGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGAcn < 1:2104334/100‑2 (MQ=255)
caccaGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGc < 1:1630530/100‑1 (MQ=255)
accaGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCt < 1:2353859/100‑1 (MQ=255)
ccaGT‑AAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTc < 2:669423/100‑1 (MQ=255)
aaaaTCGCCTATCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTAACAGTTCGGTTTCCCGCCTGACGCTCACtt > 2:2388660/1‑100 (MQ=255)
|
ATCGAACGCGGTGGGGCGAAACTTATCCGCATTCGTGATAACGGCTGCGGTATCAAAAAAGATGAGCTGGCGCTGGCGCTGGCTCGTCATGCCACCAGTAAAATCGCCTCTCTGGACGATCTCGAAGCCATTATCAGCCTGGGCTTTCGCGGTGAGGCGCTGGCGAGTATCAGTTCGGTTTCCCGCCTGACGCTCACTT > NC_000913/4397547‑4397745
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
