Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F406 I2 R1
|
14 |
182.2 |
9069404 |
93.8% |
8507100 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
354,812 |
C→T |
intergenic (+220/‑110) |
prpE → / → codB |
propionate‑‑CoA ligase/cytosine transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 354,812 | 0 | C | T | 98.2%
| 555.2
/ ‑0.6
| 163 | intergenic (+220/‑110) | prpE/codB | propionate‑‑CoA ligase/cytosine transporter |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base T (77/83); total (78/85) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.28e-01 |
Only 100 of 170 total aligned reads displayed.
CGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACAGCAA > NC_000913/354717‑354907
|
cGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATtcat > 1:313252/1‑100 (MQ=255)
gACACCATGCTCAGATGCCTGATGCGCCGCTGATGCGTCTTATCACGCCTACCCACTGTTTTTACAGCAATAATTTTTCCCCCACCTTTTTGcattcatt < 2:3715745/100‑1 (MQ=37)
acacCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCattcattc < 1:515492/100‑1 (MQ=255)
cacCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCAttcattca < 2:2824913/100‑1 (MQ=255)
ccATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCata < 2:3295561/100‑1 (MQ=255)
ccATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCata > 1:1295480/1‑100 (MQ=255)
ccATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCata > 1:4017122/1‑100 (MQ=255)
ccATGCTCAGAGGCCTGATGCGGCGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCata < 2:3894156/100‑1 (MQ=38)
tGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATaa > 1:3309180/1‑100 (MQ=255)
cTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATaaaa > 2:356992/1‑100 (MQ=255)
aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAat < 2:652339/100‑1 (MQ=255)
aGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAat < 2:3061852/100‑1 (MQ=255)
gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAata > 1:492959/1‑100 (MQ=255)
gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAata < 1:2551134/100‑1 (MQ=255)
gATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATGCATTCATATGAAAAata > 1:4204239/1‑100 (MQ=38)
gCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAatatat < 1:1066556/100‑1 (MQ=255)
ccTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCTCCTTTTTGCATTCATTCATATAAAAAATATAtt < 2:1089265/100‑1 (MQ=255)
ccTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATAtt > 1:2207091/1‑100 (MQ=255)
ccTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATAtt > 2:2437854/1‑100 (MQ=255)
cTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATAttt > 1:668812/1‑100 (MQ=255)
tGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTc > 1:1871280/1‑100 (MQ=255)
aTGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTccc > 2:1191929/1‑100 (MQ=255)
aTGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTccc < 2:485075/100‑1 (MQ=255)
tGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTcccc > 1:1383150/1‑100 (MQ=255)
tGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTAATTAATATAAAAAATATATTTcccc < 2:306361/100‑1 (MQ=255)
gCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTccccn < 2:1042146/100‑2 (MQ=255)
tGACGCGTCTTATCAGGCCTACCCGCTGTTTTTACACGGATAATTTTTCCCCCACTTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAAc < 2:1547115/100‑1 (MQ=255)
tGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAAc < 1:550141/100‑1 (MQ=255)
gACGCGTCTTATCAGGCCTACCCACTTTTTTTACACCGATAATTTTTCCCCCCCTTTTTTGCATTCATTCAAATAAAGAATATATTTCCCCACGAAAGCg > 1:4154772/1‑100 (MQ=255)
gACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACg < 1:4345956/100‑1 (MQ=255)
gACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTCCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACg < 2:2502932/100‑1 (MQ=255)
cgcgTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGAt < 1:2773833/100‑1 (MQ=255)
gcgTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTTTTTTTTTTTTTATAAAAAATATATTTCCCCACGAAAACGAtt > 2:2414181/1‑100 (MQ=255)
cgTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTg < 2:3222504/100‑1 (MQ=255)
cgTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTg < 1:3978689/100‑1 (MQ=255)
cgTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTg < 2:3079808/100‑1 (MQ=255)
gTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGc > 1:822241/1‑100 (MQ=255)
ttATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCttt < 2:1892033/100‑1 (MQ=255)
aTCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCttttt > 1:3839970/1‑100 (MQ=255)
cAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTAt > 2:447390/1‑100 (MQ=255)
cAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACATTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTAt > 2:561949/1‑100 (MQ=255)
aGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATc < 1:3206748/100‑1 (MQ=255)
ggCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCt > 1:3706250/1‑100 (MQ=255)
ggCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCt > 2:3674883/1‑100 (MQ=255)
ncTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTc > 1:1929338/2‑100 (MQ=255)
ccTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTc > 2:1874496/1‑100 (MQ=255)
ccTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTc > 1:2077053/1‑100 (MQ=255)
ccTACCCACTGGTTTTACACCGATGATTTTCCCCCCACCTTTTTGCATTCATTCATATAATAAATATATCTCCCCACGAAAACGATTGCTTTTTATCTTc < 2:3660548/100‑1 (MQ=255)
cTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTTCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCa < 1:849141/100‑1 (MQ=255)
cTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCa > 2:4198202/1‑100 (MQ=255)
tACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAg < 1:1751452/100‑1 (MQ=255)
tACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAg < 2:4124165/100‑1 (MQ=255)
aCCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGa > 2:2868229/1‑100 (MQ=255)
ccACTGTTTTTACACCGATAATTTTTCCCCCGCCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGAtn < 1:3635342/100‑2 (MQ=255)
cACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGa > 2:261692/1‑100 (MQ=255)
aCTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGaa < 2:86825/100‑1 (MQ=255)
tGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATa < 1:2055566/100‑1 (MQ=255)
tGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATa > 1:2345482/1‑100 (MQ=255)
gTTTTTACACCGATAATTTTTCCCCCACCTTTTTTTTTTTTTTTTTATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTGTCTTCAGATGAAttt > 2:2120029/1‑98 (MQ=255)
gTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAg > 1:933178/1‑100 (MQ=255)
tttACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGATTTTTATCTTCAGATGAATAGAAt > 2:3264908/1‑100 (MQ=255)
tACACCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATgc < 2:2917074/100‑1 (MQ=255)
cacCTATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATgcgg < 2:1201280/100‑1 (MQ=255)
cacCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATgcgg < 1:1837490/100‑1 (MQ=255)
cacCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATgcgg > 1:3491378/1‑100 (MQ=255)
acCGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATgcggc < 2:1387848/100‑1 (MQ=255)
ccGATAATTTTTCCCCCACCTTTTTTTTTTTTTTTTTATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGTATgcggcg > 2:700792/1‑100 (MQ=255)
ccGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATgtggcg > 1:1074958/1‑100 (MQ=255)
ccGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATgcggcg < 1:4313570/100‑1 (MQ=255)
ccGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATgcggcg > 1:1672403/1‑100 (MQ=255)
cGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGcggcgg > 2:1329570/1‑100 (MQ=255)
cGATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGcggcgg > 1:2833954/1‑100 (MQ=255)
gATAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGa > 1:1882176/1‑100 (MQ=255)
tAATTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGAtt > 2:3679031/1‑100 (MQ=255)
aTTTTTCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGAtttt > 2:656947/1‑100 (MQ=255)
tttttCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGAttttt > 1:3417423/1‑100 (MQ=255)
ttttCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGAtttttt < 1:1228715/100‑1 (MQ=255)
ttCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTgg < 1:2750584/100‑1 (MQ=255)
tCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTggg < 1:4382579/100‑1 (MQ=255)
tCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTggg > 2:3568987/1‑100 (MQ=255)
tCCCCCACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTggg < 1:4466408/100‑1 (MQ=255)
ccccACCTTTTTGCATTGACTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGtt < 1:2714158/100‑1 (MQ=255)
ccccACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGtt > 1:556577/1‑100 (MQ=255)
cccACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGttt < 2:273186/100‑1 (MQ=255)
ccACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTc > 1:4397244/1‑100 (MQ=255)
cACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCa < 1:470682/100‑1 (MQ=255)
cACCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCa < 1:1834909/100‑1 (MQ=255)
aCCTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCaa < 2:1112842/100‑1 (MQ=255)
cTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAAc < 1:2683597/100‑1 (MQ=255)
cTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAAc < 2:3262019/100‑1 (MQ=255)
cTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAAc < 1:3948340/100‑1 (MQ=255)
cTTTTTGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAAc < 2:4259779/100‑1 (MQ=255)
cTTTTTGCATTCAATCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAAc < 2:1694729/100‑1 (MQ=255)
tttttGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACa < 2:1564125/100‑1 (MQ=255)
ttttGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACAg < 1:1412939/100‑1 (MQ=255)
ttttGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACAg < 1:3225214/100‑1 (MQ=255)
tttGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACAGc < 2:2713088/100‑1 (MQ=255)
tGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACAGCaa < 1:3293752/100‑1 (MQ=255)
tGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACAGCaa > 1:725967/1‑100 (MQ=255)
tGCATTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACAGCaa > 2:3070612/1‑100 (MQ=255)
|
CGACACCATGCTCAGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACCCACTGTTTTTACACCGATAATTTTTCCCCCACCTTTTTGCACTCATTCATATAAAAAATATATTTCCCCACGAAAACGATTGCTTTTTATCTTCAGATGAATAGAATGCGGCGGATTTTTTGGGTTTCAAACAGCAA > NC_000913/354717‑354907
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
