Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I51 R1
|
223 |
69.9 |
1534784 |
95.1% |
1459579 |
214.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,714,643 |
T→G |
I89M (ATT→ATG) |
gstA → |
glutathionine S‑transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,714,643 | 0 | T | G | 100.0%
| 205.5
/ NA
| 60 | I89M (ATT→ATG) | gstA | glutathionine S‑transferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (26/34); total (26/34) |
TCGCTTCCCATATCACCCTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATTTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTATCTGTTTACGGTTCTGCGCTGGGCATACG > NC_000913/1714411‑1714875
|
tcGCTTCCCAGATCACCCTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTcc < 1:42598/236‑1 (MQ=255)
cTTCCCATATCACCCTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGc > 2:208270/1‑236 (MQ=255)
tCACCCTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCtata < 1:26992/231‑1 (MQ=255)
cTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTTACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGa > 1:38837/1‑236 (MQ=255)
tGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGa > 2:695941/1‑235 (MQ=255)
tGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGGCCCGCTATAAAACCATCGaa > 2:629756/1‑236 (MQ=255)
gCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCGGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGAATGTCTCGCTCTAAAACCAt > 2:26992/1‑231 (MQ=255)
cGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGa > 2:186164/1‑233 (MQ=255)
gTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATgg < 1:512488/236‑1 (MQ=255)
tttACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCAc > 1:583963/1‑236 (MQ=255)
aCCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGa < 1:695941/236‑1 (MQ=255)
ccTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGc < 1:528264/236‑1 (MQ=255)
cAGTGTTGATTTAAGGAAAAATCGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGCCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATa < 2:536591/236‑1 (MQ=255)
aGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATaa < 2:81325/236‑1 (MQ=255)
tgtgGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAg > 1:513825/1‑236 (MQ=255)
gATTGAGTGAAAAAACGTCTCGAAACCGGTGACGGTTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGACCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAgg < 2:711468/233‑1 (MQ=255)
tttAATGAAAACGCGTTAGGAAATCGTTACCGTTTACTTTGCCGTTACCCCTAAGGGGCCGGTGCCTGCATTGCTGCTGGATGACGGTACTTTCCTGGCGGAAGGCGTAGCGATTATGCAGTTTCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTca < 2:25693/236‑1 (MQ=255)
aTGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTcac > 1:25693/1‑233 (MQ=255)
aTGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTcac > 1:557923/1‑233 (MQ=255)
tGAAAATACGTCTCGAAAGCGGTGACGATTACTTTGCCGTTAACCGTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTGGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACct < 2:618782/236‑1 (MQ=255)
ggAAAACACGTACCAAAAACGGTGACGATTCCTTTGCCTTTAACCCGAAGGGGCAGGTGCCTGCATTGCTGCTGGTTGACGGTCCTTTGCTGACGGAAGGCTTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACct < 2:147955/235‑1 (MQ=255)
aaaaCGTTCCGAAAACGGTGACGATTCCTTTGCCATTAACCCTAAGGGGCAGGTGCCTTCTTTGCTGCTGGATGGCGTGTCTTTGCTGACGGAAGGCGTAGCGATTATTCATTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATaa < 2:232064/219‑1 (MQ=255)
gcgtgctcGAAACGGGTGACGATTACTTTGCCGTGACCCCTAAGGGGCAGGGGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGt < 2:583963/229‑1 (MQ=255)
agcGTCTCGAACACGGTGCCGATTACTTGGCCGTTAACCCAAAGGGGCAGGTGCCGGCATTGCTGCTGGATGACGGTCCTTTGCTGCCGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGttt < 2:506672/234‑1 (MQ=255)
accGTCTCGAAACCGGTGACACTTACGTGGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTTGATGCCGGTACTTTGCTGACGGAAGGCGTGGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGtt < 2:321810/233‑1 (MQ=255)
accGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTTCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGttt < 1:329346/234‑1 (MQ=255)
aaCGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGttt < 1:208270/236‑1 (MQ=255)
ctcGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCAACCGAGATGCATAAAGGTTTc > 1:232064/1‑219 (MQ=255)
cGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATacac < 1:18515/236‑1 (MQ=255)
gttGCCTGTAACCCTAAGGGGCAGGTGCCTGCATTCATGCTGGATGGCGGTACTTTGCTGACCGAAGGCGTAGCGATTATGCAATATCTTGCCGACAGCATCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAagag < 2:749418/230‑1 (MQ=255)
ccGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCg > 2:50018/1‑236 (MQ=255)
aaCCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAagag > 1:105517/1‑222 (MQ=255)
aaCCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAagag < 2:105517/222‑1 (MQ=255)
ggggCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAG‑ACACAACCGACAGTTcgcgc > 2:747434/1‑234 (MQ=255)
aGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCCCCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGa > 2:359177/1‑205 (MQ=255)
aGGTGCCTGCATGGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGa < 1:359177/205‑1 (MQ=255)
tGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGCAGAGTACA‑AACCGACAGTTCACGCGCAGCTGGagaa > 1:320656/1‑234 (MQ=255)
atttGCTGCTACATGACGGTCTTTTGCTGACGGAAGGCTGAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAgaagaa < 2:557923/233‑1 (MQ=255)
gctgctGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAAAGTACA‑AACCGACAGTTCTCGCGCAGCTGGAGACTAACCTGc > 2:578865/1‑236 (MQ=255)
cTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATAtgt > 1:183389/1‑226 (MQ=255)
cTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATAtgt < 2:183389/226‑1 (MQ=255)
ttGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAg < 1:629756/231‑1 (MQ=255)
cTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGaa > 1:747125/1‑236 (MQ=255)
cGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGAt < 1:50018/236‑1 (MQ=255)
cGGAAGGCGTAGCGATTAGGCAGTATCATGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGAt < 1:667661/236‑1 (MQ=255)
gTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCaaa > 1:603171/1‑236 (MQ=255)
tCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACC‑AACCGACAGTTCGCGCGCAGCTGGGGAAGAAGCTGCAATATGTGAACGAGGCATTGAAGGATGAGCACTGGATAGTCGGGCAACGa > 2:224881/1‑235 (MQ=255)
cgatcgCGTCCCCAACCGCCAGTTGGTGGAACCGGTAAACAGTATGTCCCGCTATAAAGCCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACaa < 2:676041/231‑1 (MQ=255)
aGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGc > 1:307082/1‑117 (MQ=255)
aGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGc < 2:307082/117‑1 (MQ=255)
aCCGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTAt < 1:232767/236‑1 (MQ=255)
cGCCAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTATCt < 2:747125/236‑1 (MQ=255)
ccAGTTGCTGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACAACGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGCATTACAATTGCTGATGACGATcggg > 2:232920/1‑233 (MQ=255)
tGGCACCGGTAACCAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTATCTGTTTACGGtt < 2:126395/236‑1 (MQ=255)
tGGCACCGGTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTATCTGTTTa < 2:603171/231‑1 (MQ=255)
gTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCgcgcgc > 1:741473/1‑127 (MQ=255)
gTAAACAGTATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCgcgcgc < 2:741473/127‑1 (MQ=255)
tATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGc > 1:408880/1‑134 (MQ=255)
tATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGc < 2:408880/134‑1 (MQ=255)
tATGTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTATCTGTTTACGGTTCTGCGCTGGGCATAcg > 1:341845/1‑236 (MQ=255)
|
TCGCTTCCCATATCACCCTGCGTGAGAGCGGAAAGGATTTTACCCTCGTCAGTGTGGATTTAATGAAAAAACGTCTCGAAAACGGTGACGATTACTTTGCCGTTAACCCTAAGGGGCAGGTGCCTGCATTGCTGCTGGATGACGGTACTTTGCTGACGGAAGGCGTAGCGATTATGCAGTATCTTGCCGACAGCGTCCCCGACCGCCAGTTGCTGGCACCGGTAAACAGTATTTCCCGCTATAAAACCATCGAATGGCTGAATTACATCGCCACCGAGCTGCATAAAGGTTTCACACCTCTGTTTCGCCCTGATACACCGGAAGAGTACA‑AACCGACAGTTCGCGCGCAGCTGGAGAAGAAGCTGCAATATGTGAACGAGGCACTGAAGGATGAGCACTGGATCTGCGGGCAAAGATTTACAATTGCTGATGCCTATCTGTTTACGGTTCTGCGCTGGGCATACG > NC_000913/1714411‑1714875
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
