Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I51 R1
|
223 |
69.9 |
1534784 |
95.1% |
1459579 |
214.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,021,050 |
A→C |
N322H (AAC→CAC) |
fliM → |
flagellar motor switching and energizing component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,021,050 | 0 | A | C | 98.7%
| 250.1
/ NA
| 76 | N322H (AAC→CAC) | fliM | flagellar motor switching and energizing component |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base C (35/40); minor base T (1/0); total (36/40) |
| Fisher's exact test for biased strand distribution p-value = 4.74e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GAACTGGCGCGATAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTAACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGATATTCCGGTCAAGCTG > NC_000913/2020818‑2021279
|
gAACTGGCGCGATAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCAcc > 1:158605/1‑236 (MQ=255)
aTAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGACCATTTGATTCACCCGATTTTaaa > 1:307592/1‑235 (MQ=255)
aTAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTTCACCGATTTTCAAt > 2:671898/1‑236 (MQ=255)
aTAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTaaa > 1:302345/1‑235 (MQ=255)
cctgggccccaaGGTGCAGCATTCCCAGCTGGAGCGGGTCGCCAACTTGGCAGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATtct < 2:307592/224‑1 (MQ=255)
ccTGGTGCCCCAGGTTCAGCATTCCCAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATtct < 1:610566/235‑1 (MQ=255)
cTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGACGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTctct < 1:379942/236‑1 (MQ=255)
cAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTAAGTATGCGTTACGGTATGACCATTTGTTTCACACGCATTTAAACTCTCTGAACGAgg > 2:386158/1‑235 (MQ=255)
agcatgcaactctggaggtggTCGCCAACTTTGCCAATATCTCGCTACGCCTGTCGCAGATTTTAAACCTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGcc < 2:158605/224‑1 (MQ=255)
agcaTTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGccc > 1:272411/1‑236 (MQ=255)
atttcgcggtaggagctggTCGCCAACTTTGCCTATATCTGCCTCCGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCa < 2:555867/224‑1 (MQ=255)
cacaGCTGGAGCTGGTCGCCAATTTGGCCGATTCCCCGCTACGCCTGTCGCAGATTTGAAAACTGACCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGa < 2:359212/236‑1 (MQ=255)
acaGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATgcg > 1:223940/1‑234 (MQ=255)
caGTTGGAGCTGGTCGCCAACTTTGCCGATACCTCGCTACGCCTGTCGAAGATTTTAAACCTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTTAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGt < 2:64876/236‑1 (MQ=255)
tggagctggTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATTAGTGACa > 1:565054/1‑236 (MQ=255)
gagctggTCACCAACTTAGCCGATACCCCGCTACGCCTGCCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGa < 2:245677/232‑1 (MQ=255)
agctggTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGAc < 1:81346/232‑1 (MQ=255)
gctggTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACTAGGAACAGCCCAAATGAGTGACATGa > 2:607341/1‑235 (MQ=255)
tCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGaat > 1:245677/1‑232 (MQ=255)
ccccactttcgCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGACCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATc < 2:302345/225‑1 (MQ=255)
cAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCgg < 1:380816/235‑1 (MQ=255)
ttGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATg > 2:17761/1‑236 (MQ=255)
tttcgcgttACGCCTGTCGGAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGGCGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGAcaacaa < 1:671898/228‑1 (MQ=255)
tctcGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACg < 1:401654/236‑1 (MQ=255)
cGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGGGACATGAATAATCCGGCCGATGCCAACAAAGGCGCACTg > 2:159081/1‑236 (MQ=255)
cTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGAc < 1:221702/236‑1 (MQ=255)
tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGcc > 1:767307/1‑182 (MQ=255)
tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGcc < 2:767307/182‑1 (MQ=255)
tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACCACAACGGCGCAATGGa > 1:366236/1‑232 (MQ=255)
tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGa > 1:306580/1‑232 (MQ=255)
tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGAt > 2:637823/1‑236 (MQ=255)
tCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAAAAGCCCAAATGAGTGACATGAATAATCCTGCCGATGACAACAACGGCGGAATGGACGaa > 2:489837/1‑235 (MQ=255)
gCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCGGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCt < 1:548678/236‑1 (MQ=255)
tGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTTGCGGCTGAATCGt > 2:588647/1‑236 (MQ=255)
aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATc < 2:755590/186‑1 (MQ=255)
aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATc > 1:755590/1‑186 (MQ=255)
aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCt > 1:692838/1‑227 (MQ=255)
aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTg > 2:509467/1‑236 (MQ=255)
aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGAAATGGACGATTGGTGGGCTGAAGCGTTg > 1:115580/1‑236 (MQ=255)
aaCCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAATGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCt < 2:692838/227‑1 (MQ=255)
ggCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGaa < 1:489837/236‑1 (MQ=255)
gcGTCCTGCCGATAGAAAAACCCGATCGCATCAGCGCCCATGTTGACGGCGTCCCGGTGCTGACCATTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACaaa < 2:375771/235‑1 (MQ=255)
tCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATACGGCCGATGACAACAACGGCGCAATGGACGATCTTTGGGCTGAAGCGTTGAGTGAAGaaaaa > 2:114943/1‑235 (MQ=255)
tCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGAAATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGAACTGTGGGCTGAACCGTTTAGCGAATcaaaa > 2:54782/1‑235 (MQ=255)
aGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGCCAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACcagcag > 2:207928/1‑236 (MQ=255)
cGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAgcgc < 1:114943/236‑1 (MQ=255)
tcatcGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCgaga < 1:637823/236‑1 (MQ=255)
catcGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGAc < 2:306580/236‑1 (MQ=255)
tGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCa > 2:32644/1‑236 (MQ=255)
gTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCTCCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCCCCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAg < 1:470481/236‑1 (MQ=255)
agtATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGaa < 1:54782/236‑1 (MQ=255)
tatgcgaCCCTAAACGGTCAGTATGCGTTACGGATAGAACCTTGGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCgg < 2:565054/226‑1 (MQ=255)
tATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCgg < 1:17761/232‑1 (MQ=255)
aTGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGt > 1:393402/1‑236 (MQ=255)
cACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCa < 1:32644/236‑1 (MQ=255)
cACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGCCGGGGGGGATGTCGACGGACCGtatc > 2:547699/1‑232 (MQ=255)
tCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAg > 2:225215/1‑147 (MQ=255)
tCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAg < 1:225215/147‑1 (MQ=255)
tCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGGGTTCCAGCAATTTGGCGGTGGGGATGTCAGCGGAAAGTTGCAGGag > 2:51055/1‑234 (MQ=255)
tCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGAAAAAGGGCTGCGGGGACGGGGTTCCAGCAATTTGCCGGCGGGGATGTTAGCGGACAATTGCAGGata > 2:693796/1‑236 (MQ=255)
ggTCAGTATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGAc < 2:366236/236‑1 (MQ=255)
atatgacttAAGGACAGAACGTTTGAGTCACCCGATTGTAAATTCTCTGAACGGGGAACAGCCCAACGGAGTGACATGAATAATCCGGCCGATGACAACAAAGGCGCAATGGACGAGCTGTGGGCTGAAGCGTTGAGCGGACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGAcc < 2:93443/225‑1 (MQ=255)
tATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACTAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGAt < 1:38620/235‑1 (MQ=255)
tATGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCAGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCt < 1:207928/232‑1 (MQ=255)
aTGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAAc > 2:338595/1‑140 (MQ=255)
aTGCGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAAc < 1:338595/140‑1 (MQ=255)
cGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGAt < 1:693796/231‑1 (MQ=255)
cGTTACGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTAt < 2:393402/234‑1 (MQ=255)
caggATAGAACATTGGATCCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAAGCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGatat < 2:380155/234‑1 (MQ=255)
aCGGATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGatat < 1:402943/236‑1 (MQ=255)
ggATAGAACATTTGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTTGTGAGTGCAGCGGAACGTTGCAGGGAGTCGCACTGATAATGGac > 2:738500/1‑231 (MQ=255)
aaCATTTGATTCACCCGATTTTAAATTCTCTGAACGAgg > 1:42637/1‑39 (MQ=255)
aaCATTTGATTCACCCGATTTTAAATTCTCTGAACGAgg < 2:42637/39‑1 (MQ=255)
ttGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGAt > 2:450784/1‑214 (MQ=255)
ttGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGAt < 1:450784/214‑1 (MQ=255)
ttGATTCACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGGGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGATATTCCGGTCAAGCTg > 2:519224/1‑236 (MQ=255)
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GAACTGGCGCGATAACCTGGTGCGCCAGGTGCAGCATTCACAGCTGGAGCTGGTCGCCAACTTTGCCGATATCTCGCTACGCCTGTCGCAGATTTTAAAACTGAACCCCGGCGACGTCCTGCCGATAGAAAAACCCGATCGCATCATCGCCCATGTTGACGGCGTCCCGGTGCTGACCAGTCAGTATGGCACCCTCAACGGTCAGTATGCGTTACGGATAGAACATTTGATTAACCCGATTTTAAATTCTCTGAACGAGGAACAGCCCAAATGAGTGACATGAATAATCCGGCCGATGACAACAACGGCGCAATGGACGATCTGTGGGCTGAAGCGTTGAGCGAACAAAAATCAACCAGCAGCAAAAGCGCTGCCGAGACGGTGTTCCAGCAATTTGGCGGTGGTGATGTCAGCGGAACGTTGCAGGATATCGACCTGATTATGGATATTCCGGTCAAGCTG > NC_000913/2020818‑2021279
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
