Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F433 I3 R1
|
16 |
161.1 |
8199666 |
93.6% |
7674887 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,333,978 |
G→A |
D42N (GAC→AAC) |
cysB → |
N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,333,978 | 0 | G | A | 97.8%
| 438.6
/ ‑2.3
| 136 | D42N (GAC→AAC) | cysB | N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor |
| Reads supporting (aligned to +/- strand): ref base G (2/1); new base A (80/53); total (82/54) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 |
Only 100 of 136 total aligned reads displayed.
GTTGAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCT > NC_000913/1333882‑1334075
|
gttgAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAAc > 2:1775613/1‑99 (MQ=255)
aGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGc > 2:370882/1‑99 (MQ=255)
aGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGc < 2:1679430/99‑1 (MQ=255)
gtggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTa > 2:3144299/1‑99 (MQ=255)
tggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAg < 1:2459411/99‑1 (MQ=255)
gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGc > 1:2765199/1‑99 (MQ=255)
tCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCa > 2:1443204/1‑99 (MQ=255)
tCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCa > 2:270486/1‑99 (MQ=255)
cAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCAt > 1:704113/1‑99 (MQ=255)
aaTCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCAtt > 2:220139/1‑99 (MQ=255)
aaTCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCAtt < 1:16178/99‑1 (MQ=255)
aaTCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCAtt > 1:1669499/1‑99 (MQ=255)
aaTCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCAtt > 1:789765/1‑99 (MQ=255)
tCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGCAAACGAGCTAGGCATTCa > 2:935430/1‑99 (MQ=255)
tCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCa > 2:1097560/1‑99 (MQ=255)
tCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCa > 1:3402424/1‑99 (MQ=255)
tCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCa > 1:3359573/1‑99 (MQ=255)
tCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCa > 1:3278769/1‑99 (MQ=255)
tCATAACCTGAATGTCTCATCAACAGCGGAAGCACTTTACACATCACTACCCTCCATCAGTAACCAAATAAGAATACTCTAAAACGAGCTATGCACTCa > 2:3455999/1‑99 (MQ=255)
aTAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAAAAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCaaa > 1:2911152/1‑99 (MQ=255)
aaCCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAtt > 2:257683/1‑99 (MQ=255)
aCCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAttt > 2:3882101/1‑99 (MQ=255)
ccTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAtttt < 1:1877824/99‑1 (MQ=255)
ccTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGAACAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAtttt > 2:1099422/1‑99 (MQ=255)
gAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAACCGAGCTAGGCATTCAAATTTTTTc < 2:415168/99‑1 (MQ=255)
gAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTc < 1:93628/99‑1 (MQ=255)
aaTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTcc < 2:307251/99‑1 (MQ=255)
aaTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTcc < 1:1047908/99‑1 (MQ=255)
aTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTccc < 2:2417325/99‑1 (MQ=255)
aTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTccc < 2:3270369/99‑1 (MQ=255)
aTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTccc < 1:853888/99‑1 (MQ=255)
tctcATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGaa > 2:1512565/1‑99 (MQ=255)
tctcATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGaa > 1:2729010/1‑99 (MQ=255)
tcatcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGc > 1:1848312/1‑99 (MQ=255)
catcaACAGCGGAAGGACTTTACACATCACAACCCCGGATCAGTAAACAACTCAGAATGCTGGAAAACGAGCTAGGCCTCCAAATTTTTGCCCCaaccc > 2:56942/1‑96 (MQ=255)
atcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCgg > 2:2769456/1‑99 (MQ=255)
atcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCgg < 2:2116724/99‑1 (MQ=255)
atcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCgg < 1:3292867/99‑1 (MQ=255)
atcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCgg > 1:2100910/1‑99 (MQ=255)
atcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCgg > 1:3149696/1‑99 (MQ=255)
tcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGc < 1:2889512/99‑1 (MQ=255)
aaCAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCaa < 2:709998/99‑1 (MQ=255)
cAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGc > 1:1480464/1‑99 (MQ=255)
gCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCAc < 1:1643723/99‑1 (MQ=255)
gCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCAc < 1:1692998/99‑1 (MQ=255)
cGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCAcc < 2:773832/99‑1 (MQ=255)
cGGAAGGACTTCACACATGCCAACCCGGGATCAGTAAACAACTCAGAATCCTGCAAAACGAGCAAGACACGCAGATTTTTTCCCGAAGCCGGAAGCAcc > 2:901230/1‑99 (MQ=255)
gAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTg > 2:253012/1‑99 (MQ=255)
aaGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGTTGCAGCAAGCACCTGa > 2:2400467/1‑99 (MQ=255)
aaGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGa > 2:1229077/1‑99 (MQ=255)
aaGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGa < 1:1537031/99‑1 (MQ=255)
ggACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACg > 1:4005917/1‑99 (MQ=255)
gACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCACGCACCTGACGc > 2:3970332/1‑99 (MQ=255)
aCTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCa < 1:800102/99‑1 (MQ=255)
cTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAg > 2:3976811/1‑99 (MQ=255)
tttACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAgg < 2:3661754/99‑1 (MQ=255)
tttACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAgg < 1:2565671/99‑1 (MQ=255)
acacATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTaa > 1:3999783/1‑99 (MQ=255)
acacATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTaa < 2:1401407/99‑1 (MQ=255)
acacAACACGACCCGGGAGCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGAATACAAATTTTTTTCCGAAGCGGCAAGCACGTGACGCAAGTaa > 2:472821/1‑99 (MQ=255)
caTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGc < 1:307055/99‑1 (MQ=255)
aTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGcc > 1:178735/1‑99 (MQ=255)
tCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCca > 1:1041533/1‑99 (MQ=255)
cacaACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCcag > 2:2449411/1‑99 (MQ=255)
cacaACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCcag > 1:3458758/1‑99 (MQ=255)
acaACCCGGGATCAGTAAACAAGTCAGAATCCTGGAAAACGAGCTAGGCATTCAACTTTTTTCCCGAAGCGGCCCCCACCTGACGCAGGCACCGCcagc > 1:3317435/1‑99 (MQ=255)
tctcccGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCcagca < 1:2608619/96‑1 (MQ=255)
aCCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAgg > 1:762008/1‑99 (MQ=255)
cccGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTTTTTTTTTTTCAAGCACCTGACGCAGGTAACGCcaccagtg > 2:3965727/1‑97 (MQ=255)
cccGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAggg < 2:2239574/99‑1 (MQ=255)
cccGGGATAAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAggg > 1:3744619/1‑99 (MQ=255)
ccGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCcagcagaga > 2:2571172/1‑96 (MQ=255)
ccGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGc > 1:3462621/1‑99 (MQ=255)
ccGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGc < 2:3011259/99‑1 (MQ=255)
cGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCa > 2:1524188/1‑99 (MQ=255)
aGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaata > 1:2422672/1‑99 (MQ=255)
aGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaata > 2:3701288/1‑99 (MQ=255)
aGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaata > 1:2350383/1‑99 (MQ=255)
gTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaataa < 1:1467755/99‑1 (MQ=255)
gTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaataa > 1:4034855/1‑99 (MQ=255)
tAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaataat < 1:2954942/99‑1 (MQ=255)
aaaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAATCTTCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAAtt > 2:1368732/1‑99 (MQ=255)
aaaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAAtt > 1:2805404/1‑99 (MQ=255)
aaaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAAtt < 2:2634899/99‑1 (MQ=255)
aaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTc < 2:3568978/99‑1 (MQ=255)
aaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTc < 1:3594490/99‑1 (MQ=255)
aaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTc < 2:2328832/99‑1 (MQ=255)
aaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGACAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTc > 2:1830379/1‑99 (MQ=255)
aaGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTa > 1:212718/1‑99 (MQ=255)
gTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAtc > 1:692796/1‑99 (MQ=255)
aGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAtcgct > 2:2707019/1‑99 (MQ=255)
aTGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAtcgctcgc < 2:2664621/99‑1 (MQ=255)
aTGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAtcgctcgc < 1:1546149/99‑1 (MQ=255)
gCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGa < 2:1924829/99‑1 (MQ=255)
cTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGaa > 2:3927659/1‑99 (MQ=255)
cTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGaa > 1:645641/1‑99 (MQ=255)
cTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGaa < 1:1315113/99‑1 (MQ=255)
cTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGaa < 1:1013819/99‑1 (MQ=255)
gAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTc > 2:2123211/1‑99 (MQ=255)
aGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCATGCAACTGACGCAGGTAACGCCAGCAGGGCACGACATAATTCGTATGGCTCGCGAAGTCCt > 2:518911/1‑99 (MQ=255)
|
GTTGAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTCCT > NC_000913/1333882‑1334075
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
