Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F433 I2 R1
|
16 |
192.2 |
10470201 |
89.4% |
9360359 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,333,978 |
G→A |
D42N (GAC→AAC) |
cysB → |
N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,333,978 | 0 | G | A | 96.7%
| 660.6
/ 3.9
| 213 | D42N (GAC→AAC) | cysB | N‑acetylserine‑responsive cysteine regulon transcriptional activator; autorepressor |
| Reads supporting (aligned to +/- strand): ref base G (3/4); new base A (98/108); total (101/112) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 213 total aligned reads displayed.
GTTGAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTC > NC_000913/1333882‑1334073
|
gttgAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAAc < 1:4869666/99‑1 (MQ=255)
gttgAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAAc < 2:1452190/99‑1 (MQ=255)
gttgAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAAc < 2:1617525/99‑1 (MQ=255)
tgAGGTGTTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGa < 2:818047/99‑1 (MQ=255)
tgAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGa < 2:91323/99‑1 (MQ=255)
tgAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGa < 2:622481/99‑1 (MQ=255)
aGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACAGCACAACCCAGGAACAGAAAACAAGTCAGAATGCTGGAAAACGAGc > 1:4467318/1‑99 (MQ=255)
gtggtCAGTCATAACCTGAATGTCTCATCAACAACGGAAGAGCTATACACATCACAACGCGGTACGAGTAAACAAGTCATAATGATGGAAAACGAGCTa > 2:1825411/1‑99 (MQ=255)
gtggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTa < 2:4501734/99‑1 (MQ=255)
gtggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTa > 1:3232056/1‑99 (MQ=255)
gtggtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTa > 1:977618/1‑99 (MQ=255)
gtCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGc > 2:4620536/1‑99 (MQ=255)
aataatACCCTGAATATATCATCAAAAGAGGAAGGACCTTACACACCACCACACGGGATCAGTAAACAATGCAGAATGCTGGAAGCCGAGCTAGGAAtt > 2:4398738/1‑99 (MQ=255)
aaTCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATAAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCAtt > 1:4291538/1‑99 (MQ=255)
aTCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTc > 1:542122/1‑99 (MQ=255)
tCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCa > 1:3984629/1‑99 (MQ=255)
aTAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAATCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCaaa < 1:691085/99‑1 (MQ=255)
aTAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCaaa < 1:903584/99‑1 (MQ=255)
tAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAt < 2:530760/99‑1 (MQ=255)
tAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAt < 1:4084980/99‑1 (MQ=255)
tAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAt < 1:3077714/99‑1 (MQ=255)
ccTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAtttt < 2:3271291/99‑1 (MQ=255)
ccTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAtttt < 1:3355618/99‑1 (MQ=255)
ccTGAATGTCTCATCAACACCGGAAGGACTTTAAACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAtttt < 2:2434060/99‑1 (MQ=255)
cTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAttttt < 2:3925795/99‑1 (MQ=255)
gAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTc < 1:186119/99‑1 (MQ=255)
gAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTc < 1:1845591/99‑1 (MQ=255)
aTGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTccc < 1:5058826/99‑1 (MQ=255)
tGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCg > 1:3592650/1‑99 (MQ=255)
tcatcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGc < 2:138722/99‑1 (MQ=255)
tcatcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGc < 1:1720557/99‑1 (MQ=255)
catcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCg < 1:1083776/99‑1 (MQ=255)
catcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCg > 1:5218676/1‑99 (MQ=255)
catcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCg > 2:3698324/1‑99 (MQ=255)
atcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCgg > 2:83507/1‑99 (MQ=255)
atcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCgg > 2:2243853/1‑99 (MQ=255)
atcaACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCgg > 1:255740/1‑99 (MQ=255)
caACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCa > 1:1242440/1‑99 (MQ=255)
aaCAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCaa < 1:2416835/99‑1 (MQ=255)
aCAGCGGAAGGACTTTACACATCACAACCCGGGATCATTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAg < 1:104734/99‑1 (MQ=255)
aCAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAg < 1:4298192/99‑1 (MQ=255)
aCAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAg < 1:2892569/99‑1 (MQ=255)
cAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGTAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGc < 1:894190/99‑1 (MQ=255)
cAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGc < 2:3021069/99‑1 (MQ=255)
aGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCa > 2:4233884/1‑99 (MQ=255)
gCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCAc < 1:3483569/99‑1 (MQ=255)
gCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCAc < 1:154160/99‑1 (MQ=255)
cGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCAcc < 1:3467444/99‑1 (MQ=255)
gAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTg > 2:2749274/1‑99 (MQ=255)
gAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTCCCCGAAGCGGCAAGCACCta > 1:5019417/1‑98 (MQ=255)
aGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGAc > 1:623048/1‑99 (MQ=255)
aGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGAc > 1:4684779/1‑99 (MQ=255)
aGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACAAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGAc < 1:3022174/99‑1 (MQ=255)
ggACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACg < 2:1776733/99‑1 (MQ=255)
gACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGc < 1:1280359/99‑1 (MQ=255)
gACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGc < 2:65577/99‑1 (MQ=255)
cTTTACACATCACAACCCGGGAACAGTAATCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAg < 2:4559447/99‑1 (MQ=255)
tttACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAgg > 2:4656522/1‑99 (MQ=255)
ttACACATCACAACCCGGGAGCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGGCGCGGCAAGCACCTGACGCAGGt < 2:3122826/99‑1 (MQ=255)
acacATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTaa < 1:1476856/99‑1 (MQ=255)
acacATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTaa < 1:4997232/99‑1 (MQ=255)
cacaTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAAc < 2:34356/99‑1 (MQ=255)
cacaTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAAc < 2:1160447/99‑1 (MQ=255)
acaTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACg > 1:111091/1‑99 (MQ=255)
acaTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACg > 1:3250825/1‑99 (MQ=255)
aaaacacaACCCGGGATCAGTAACAAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGCTAACg < 2:1033247/95‑1 (MQ=255)
aTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGcc > 2:129178/1‑99 (MQ=255)
aTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGcc > 1:1639896/1‑99 (MQ=255)
aTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGcc < 2:2957572/99‑1 (MQ=255)
aTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGcc > 2:2675060/1‑99 (MQ=255)
aTCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAAGTTTTTCCCGAAGCGGCAAGCTCCTGACGCAGGTAACGcc > 1:4939349/1‑99 (MQ=255)
tCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCAAGAAGCGGCAAGCACCTGACGCAGGTAACGCca > 1:3837741/1‑99 (MQ=255)
cacaACCCGGGATCAGTAAACAAGTCATAATCCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCcag > 2:4004029/1‑99 (MQ=255)
cacaACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCcag < 2:494239/99‑1 (MQ=255)
cccGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAggg < 2:3180789/99‑1 (MQ=255)
cccGGGATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAACGGCAAGCACCTGACGCAGGTAACGCCAGCAggg > 2:1829117/1‑99 (MQ=255)
ggATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAg < 1:4263026/99‑1 (MQ=255)
ggATCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAg < 1:2072554/99‑1 (MQ=255)
tCAGTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGaaa < 1:2510827/99‑1 (MQ=255)
gTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaataa < 1:3928673/99‑1 (MQ=255)
gTAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaataa < 1:2962707/99‑1 (MQ=255)
tAAACAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAaataat > 2:3500096/1‑99 (MQ=255)
aaaCAAGTCAGAATGCTGGAAAACGAGCCAGGCACTCAAATTTTTTCCCGCCGCGGCAAGCCCCTGACGCAGGTCACGCCCGCCGGGCCAGAcataaat > 2:1496664/1‑97 (MQ=255)
aaCAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACACCAGCAGGGCAAGAAATAATTc < 1:2795028/99‑1 (MQ=255)
aaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTc > 1:187509/1‑99 (MQ=255)
aaCAAGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTc < 2:1203310/99‑1 (MQ=255)
aaCAAGTAAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTc < 2:1643432/99‑1 (MQ=255)
aaGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTa < 1:1954177/99‑1 (MQ=255)
tgTCACAATGCTGTAAAACGAGCTAGGCATTCAAATTTTTTCCCGCAGCGGCCAGCACCTGACGCAGGTAACGTCAGCAGGGCAAGAAATAATTCGTAt < 2:4817728/98‑1 (MQ=255)
aGTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAt < 2:2159879/99‑1 (MQ=255)
gTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAtc > 2:4117673/1‑99 (MQ=255)
gTCAGAATGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAtc > 1:2544819/1‑99 (MQ=255)
gAATGCTCTAAAACTATCTATTCATTCAAATTTTTTCCCCAATCTTCAAACACCTAACCCAAATAACACCAGCAGGGCAAGAAATAATTCGTAtcgctc < 1:224949/99‑1 (MQ=255)
tctcTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAtcgctcgc < 2:769551/96‑1 (MQ=255)
aTGCTGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTAtcgctcgc < 2:2124142/99‑1 (MQ=255)
tGGAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGaga > 1:788026/1‑97 (MQ=255)
ggAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGt > 1:2463541/1‑99 (MQ=255)
gAAAACGAGCTAGGCATTCAAATTTTTTTTTTTTTTTTTAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCCAAGTc > 2:3737997/1‑99 (MQ=255)
gAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTc < 1:1502348/99‑1 (MQ=255)
gAAAACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTc > 2:4263513/1‑99 (MQ=255)
|
GTTGAGGTGGTCAATCATAACCTGAATGTCTCATCAACAGCGGAAGGACTTTACACATCACAACCCGGGATCAGTAAACAAGTCAGAATGCTGGAAGACGAGCTAGGCATTCAAATTTTTTCCCGAAGCGGCAAGCACCTGACGCAGGTAACGCCAGCAGGGCAAGAAATAATTCGTATCGCTCGCGAAGTC > NC_000913/1333882‑1334073
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
