Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F433 I2 R1
|
16 |
192.2 |
10470201 |
89.4% |
9360359 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
1,293,015 |
IS1 (–) +8 bp |
intergenic (‑93/‑505) |
hns ← / → tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 291401 | NA (NA) | 219 (1.110) |
106/196 |
0.2 |
98.5% |
noncoding (1/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
1293015 = |
3 (0.020) | intergenic (‑93/‑512) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| * |
? |
NC_000913 |
= 1050545 | NA (NA) | 219 (1.110) |
115/196 |
0.1 |
98.5% |
noncoding (768/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
= 1293022 |
3 (0.020) | intergenic (‑100/‑505) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
Only 100 of 219 total aligned reads displayed.
CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291304‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC > NC_000913/1293015‑1293112
CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 2:2820994/99‑1
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAA > 2:5136012/1‑99
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAA > 2:3004258/1‑99
TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAA > 2:65225/1‑99
AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAA < 2:4412280/99‑1
AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAA < 2:2259763/99‑1
AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAA < 2:1731471/99‑1
GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAAT < 1:229654/99‑1
GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAAT < 1:1742167/99‑1
CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACACAAAATT > 1:3453839/1‑99
TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGGAAGTTGGCAGCATCACCCAAAATTG < 1:3510700/99‑1
GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGT < 1:3329568/99‑1
AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTT < 1:2013596/99‑1
AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTT < 1:4419240/99‑1
AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCACCACCCAAAATTGTT < 2:3938680/99‑1
CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCT < 1:5066918/99‑1
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTA > 2:3683303/1‑99
GACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTT < 1:363506/99‑1
ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCTGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTG > 2:3726996/1‑99
ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTG > 2:2206186/1‑99
ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTG < 1:105672/99‑1
CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGT < 2:3467421/99‑1
CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGT > 1:3428895/1‑99
AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTG < 1:985555/99‑1
TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCG > 2:5121469/1‑99
ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCC > 1:1074744/1‑99
ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCC > 2:732749/1‑99
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCA > 1:461852/1‑99
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCA > 2:104059/1‑99
AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAA < 2:2502423/99‑1
AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAA > 1:2023883/1‑99
GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAAT > 2:4203177/1‑99
GAAACAGAAGCCACTGGAGCACCACAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAAT < 2:1895100/99‑1
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATA > 1:1287735/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATA > 1:2730049/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATA > 1:1184905/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATA > 1:1025202/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCGTTATTTTGTGCCGCCAATA > 2:4605934/1‑99
AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAgatc > 2:1932986/1‑95
ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAA < 1:5260510/99‑1
ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAA > 2:4168899/1‑99
AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGACAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATA > 2:4456623/1‑99
AGCCACTGGAGCACCTCAAAAACACCATGATACACTAAATCAGTAAGTTGGCAGCATCACCGAAAATTGTTCTTTATGTTGTGCCGCCAATAAATATCT > 1:4913346/1‑99
GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTT > 2:3298996/1‑99
CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTT < 1:1983940/99‑1
ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTC > 1:3284320/1‑99
ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCAGCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTC > 2:4764123/1‑99
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAA > 1:723474/1‑99
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAA > 1:1655573/1‑99
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAA > 1:4418192/1‑99
CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAAT > 1:1819608/1‑99
CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAAGAAATATCTTTTCATAAAAT < 1:4121752/99‑1
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTA > 1:3956849/1‑99
CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG > 2:2375507/1‑99
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC < 1:3190232/99‑1
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC < 1:1427239/99‑1
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGGGCCGCCAATAAATATCTTTTCATAAAATTAGC > 1:4832510/1‑99
TCAAAAACACAATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC < 2:2044950/99‑1
CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCC > 1:4070384/1‑99
AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG > 1:3776385/1‑99
AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGA > 1:2084472/1‑99
AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGA > 2:3109633/1‑99
ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGGAA < 2:4739167/99‑1
ACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTACTCAGAAA > 1:2672025/1‑99
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAC > 1:3765182/1‑99
CACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAT > 2:4965057/1‑99
ACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATA > 2:4858249/1‑99
TAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATA > 1:3048963/1‑99
AAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACTCGGCATATAG < 1:847640/99‑1
AATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGC < 2:4489896/99‑1
ATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC > 1:70205/1‑99
ATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC < 2:1937216/99‑1
ATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC < 1:1219668/99‑1
ATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC < 1:1365998/99‑1
TCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCC > 1:946399/1‑99
TCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCC > 1:944410/1‑99
TCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTATGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCC > 1:2767864/1‑99
GTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAC > 1:3162380/1‑99
GTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAC > 1:319749/1‑99
TTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACA > 2:1704874/1‑99
TTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACA > 1:5095404/1‑99
tatCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAATACGCGGCATATAGCCCTATTTACAC < 2:1376854/96‑1
TGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC < 2:2799877/99‑1
TGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC < 1:4235921/99‑1
TGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC < 2:4567981/99‑1
TGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC > 1:43745/1‑99
GCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCG > 1:5002079/1‑99
CAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGA > 1:59006/1‑99
agtATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGAT < 2:4190598/96‑1
AGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGAT < 2:1127520/99‑1
AGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGAT < 1:2177045/99‑1
AGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGAT < 2:1436934/99‑1
CATCACCCAAAATTGTTCTTTATTTTGTACCGCCAATAAATATCTTTTCATAAAATTAGCCATAAAAGACGCGCCATGTAGCCCTATTTACACCGATGA > 2:4898503/1‑99
TCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATT < 1:4472019/99‑1
TCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATT < 2:2462337/99‑1
ACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTC < 2:3347359/99‑1
CCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG > 1:29093/1‑99
CCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACAGATGATTTCG > 1:2581140/1‑99
CCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC < 2:1496539/99‑1
CCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCATATTTACACCGATGATTTCGg > 2:904530/1‑98
CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291304‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC > NC_000913/1293015‑1293112
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
