Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F433 I3 R1
|
16 |
161.1 |
8199666 |
93.6% |
7674887 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
1,293,015 |
IS1 (–) +8 bp |
intergenic (‑93/‑505) |
hns ← / → tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 291401 | NA (NA) | 163 (1.010) |
88/196 |
0.5 |
97.4% |
noncoding (1/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
1293015 = |
4 (0.030) | intergenic (‑93/‑512) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| * |
? |
NC_000913 |
= 1050545 | NA (NA) | 159 (0.990) |
91/196 |
0.4 |
97.3% |
noncoding (768/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
= 1293022 |
4 (0.030) | intergenic (‑100/‑505) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
Only 100 of 163 total aligned reads displayed.
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291306‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC > NC_000913/1293015‑1293112
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAA > 2:930075/1‑99
tgccCAGGAGGGACAGCTGTTAGAAACAGAAGCCACCGGAGCACCTCAAAAACACCATCATACACTAAATCAGTACGTTGGCAGCATCACCCAAAATTG > 2:296847/5‑99
TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTG > 1:1554964/1‑99
AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTT < 1:3552169/99‑1
AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTT < 1:1885961/99‑1
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTA > 2:2784827/1‑99
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTA > 2:1924041/1‑99
GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTA > 2:1769968/1‑99
GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTT < 1:1684145/99‑1
GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTT > 1:1730437/1‑99
CAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGT < 2:3878700/99‑1
CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCC > 1:4074554/1‑99
ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCC > 2:295101/1‑99
ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCC > 1:1283840/1‑99
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCA > 2:2130653/1‑99
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCA < 2:1529607/99‑1
TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCA > 1:757661/1‑99
AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAA > 1:3297366/1‑99
AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAA > 2:1208748/1‑99
GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAAT > 1:1383694/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATA > 2:3438616/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATA > 2:2496459/1‑99
AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATA > 2:3131650/1‑99
acgGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCACTAAA > 1:2431768/4‑99
CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAAT < 2:1026813/99‑1
AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATA > 1:559750/1‑99
AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCATAATTGTTCTTTATTTTGTGCAGCCAATAAATATC > 2:1694184/1‑99
AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATC > 2:2893385/1‑99
AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATC > 2:835157/1‑99
AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTGGTGCCGCCAATAAATATCT < 2:436783/99‑1
GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTT > 2:2962145/1‑99
CCACTGGAGCACCTCAAAAACACTATCAGACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTGGTGCCGCCAATAAATATCTTT > 1:3852696/1‑99
CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTT < 1:3560302/99‑1
CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTT < 2:3327290/99‑1
CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTT > 2:2824955/1‑99
ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTC < 1:3503744/99‑1
ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTC > 1:576902/1‑99
CTGGAGCACATCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCA < 2:3368438/99‑1
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAA > 2:1487794/1‑99
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAA > 2:3713067/1‑99
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAA > 1:2978643/1‑99
GAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAA > 2:3941057/1‑99
GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAA > 2:2698149/1‑99
CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAAT > 2:2265424/1‑99
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTA > 2:3253740/1‑99
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTA < 1:3618719/99‑1
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTA < 2:2664136/99‑1
CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG > 2:1191908/1‑99
CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG > 1:1299515/1‑99
CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG > 2:782635/1‑99
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC > 1:1946046/1‑99
AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCA > 1:660440/1‑99
AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCA > 1:2894956/1‑99
AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCA > 1:684331/1‑99
AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTAATAAAATTAGCCA > 2:3140431/1‑99
AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGACGCCAATAAATATCTTTTCATAAAATTAGCCA > 2:2436249/1‑99
AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG > 2:1872279/1‑99
AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGA > 2:3286677/1‑99
AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAA < 1:2543426/99‑1
AACACCATCATACACTAAAACAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAA < 2:1134911/99‑1
TCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGC > 1:3130687/1‑99
TCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGC < 2:647896/99‑1
CATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCG > 1:3202453/1‑99
TACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGC > 1:4137848/1‑99
ACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCA > 1:2194415/1‑99
ACACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCA > 1:3877936/1‑99
ACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATACATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATA > 2:2549192/1‑99
ACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATA > 2:3686267/1‑99
ACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATA > 2:3030990/1‑99
ACTAAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATA > 2:2131582/1‑99
ACTAAATCAGTAAGTTGACAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATA > 1:3447991/1‑99
AAATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAG < 1:2601698/99‑1
AATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGC < 2:1681852/99‑1
ATCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCC < 1:896340/99‑1
TCAGTAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCC > 2:148004/1‑99
TAAGTTGGCAGCATCTCCCAAAATTGTTCTTTATTTTGTGCCGCACATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATT < 2:3865022/99‑1
TAAGTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATT < 1:993883/99‑1
GTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAC < 1:1012695/99‑1
GTTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAC < 1:1011387/99‑1
TTGGCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACA > 2:684097/1‑99
TTGGCAGCATCACCCAAAACTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAta < 2:231529/99‑3
TGGCAGCATCACCCAAAATTGTTCTTCATGTTGTGCCGCCAATAAATATCTTTTCATATAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC < 2:3858006/99‑1
TGGCAGCATAACCCAAAATTGTTCTTTATTTTGTACCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC < 2:2932378/99‑1
GGCAGCATCACCCAAAATTGTTCTTTATTTTATGCCGTCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGGATATAGCCCTATTTACACC > 1:3671990/1‑99
GCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCG > 2:116610/1‑99
GCAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCG > 1:3969648/1‑99
CAGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGA < 2:3141100/99‑1
AGCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGAT < 1:1797644/99‑1
AGCATCACCCAAAATTGTTCTTCATTTTATGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGAT < 1:3761360/99‑1
GCATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATG > 1:460377/1‑99
CATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGA > 2:341902/1‑99
CATCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGA < 2:739891/99‑1
TCACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATT < 1:3467520/99‑1
ACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTa > 2:953492/1‑98
ACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTC < 2:1333696/99‑1
ACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTC > 2:453783/1‑99
ACCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTC > 2:881250/1‑99
CCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG > 1:1964242/1‑99
CCCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCG > 2:2634046/1‑99
CCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC > 2:796234/1‑99
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/291306‑291401
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGC > NC_000913/1293015‑1293112
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
