Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
658,782 |
A→C |
pseudogene (558/594 nt) |
ybeM → |
pseudogene, C‑N hydrolase superfamily homology;putative enzyme; Not classified; putative amidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 658,782 | 0 | A | C | 97.8%
| 779.8
/ 4.7
| 225 | pseudogene (558/594 nt) | ybeM | pseudogene, C‑N hydrolase superfamily homology;putative enzyme; Not classified; putative amidase |
| Reads supporting (aligned to +/- strand): ref base A (1/4); new base C (127/92); total (129/96) |
| Fisher's exact test for biased strand distribution p-value = 1.67e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.74e-01 |
Only 100 of 226 total aligned reads displayed.
CGTCACCATTGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTAAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATTGTGTGCGCGCGTC > NC_000913/658686‑658877
|
cACCATTGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCaacaac > 1:1235294/1‑100 (MQ=255)
cACCATTGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCaacaac > 2:1875587/1‑100 (MQ=255)
cACCATTGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCaacaac > 1:5498735/1‑100 (MQ=255)
aCCATTGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAAcc < 1:1896559/100‑1 (MQ=255)
aTTGCAGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTc > 2:2883729/1‑100 (MQ=255)
tGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGc < 2:5410044/100‑1 (MQ=255)
gCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCt < 2:5197780/100‑1 (MQ=255)
cGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCtt > 2:134873/1‑100 (MQ=255)
gCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTg > 1:1264667/1‑100 (MQ=255)
cAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTgc < 1:4974037/100‑1 (MQ=255)
aGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTgcg < 2:581351/100‑1 (MQ=255)
aGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTgcg > 2:2718284/1‑100 (MQ=255)
gTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccg > 1:1470890/1‑100 (MQ=255)
gTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccg > 1:65107/1‑100 (MQ=255)
gTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccg > 1:5402907/1‑100 (MQ=255)
tCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgc > 1:3225553/1‑100 (MQ=255)
tCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgc > 1:3112216/1‑100 (MQ=255)
cAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgcc < 1:1830137/100‑1 (MQ=255)
cAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgcc > 2:2414001/1‑100 (MQ=255)
cAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgcc > 2:1809521/1‑100 (MQ=255)
aGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgccg < 1:4663503/100‑1 (MQ=255)
aGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgccg > 2:4669967/1‑100 (MQ=255)
gAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgccgc > 2:1946360/1‑100 (MQ=255)
gAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgccgc > 1:1062863/1‑100 (MQ=255)
gAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGcgccgccgc > 1:2285858/1‑100 (MQ=255)
aaTGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCaa > 1:3490131/1‑100 (MQ=255)
aTGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAat < 2:3618170/100‑1 (MQ=255)
gCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAatta > 2:336127/1‑100 (MQ=255)
ccTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAattat > 2:444157/1‑100 (MQ=255)
cTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTGAACAACCGTCGCTTTGCGCCGCCGCAattatt > 1:5097512/1‑100 (MQ=255)
cTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAattatt > 2:3702396/1‑100 (MQ=255)
tGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAAttatta < 1:2911204/100‑1 (MQ=255)
gCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATtattat < 2:2631036/100‑1 (MQ=255)
gCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATtattat < 2:1239468/100‑1 (MQ=255)
cTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTatgat > 1:2298064/1‑100 (MQ=255)
tCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTatgatg < 2:4307010/100‑1 (MQ=255)
tCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTatgatg < 1:339311/100‑1 (MQ=255)
tCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTatgatg > 1:124183/1‑100 (MQ=255)
cATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGt > 1:2122631/1‑100 (MQ=255)
aTTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGtt > 1:1774509/1‑100 (MQ=255)
ttgtGGCGGAAGTGCCGCCCGAACGCGTGCGTCAGTTGCCCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGttt < 2:2552632/97‑1 (MQ=255)
ctGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCTACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGttttt < 2:3309783/99‑1 (MQ=255)
tGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGtttttt < 1:1558401/100‑1 (MQ=255)
tGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGtttttt < 2:1609104/100‑1 (MQ=255)
ggCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGttttttt > 1:4882274/1‑100 (MQ=255)
ggCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGtttttag > 1:3340870/1‑98 (MQ=255)
gCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTAAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTa > 2:191867/1‑100 (MQ=255)
cGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTAc > 1:201516/1‑100 (MQ=255)
gAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCCATTATTATGATGTTTTTTTACTc < 2:4031625/100‑1 (MQ=255)
gAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTc < 2:2528998/100‑1 (MQ=255)
acctGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCg > 2:2803153/4‑100 (MQ=255)
acctGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCg > 2:421908/4‑100 (MQ=255)
aaGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCg < 1:2476578/100‑1 (MQ=255)
gTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGgc > 1:1507420/1‑100 (MQ=255)
gTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGgc > 2:2116024/1‑100 (MQ=255)
cGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCtt < 1:2603589/100‑1 (MQ=255)
cGCCCGAACGTGGGCGTCAGGTGCGCGCGGAACTGCCCGTCTTCAACAACCGTGGCTTTCCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCtt < 2:2844352/100‑1 (MQ=255)
gCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTg < 2:474490/100‑1 (MQ=255)
gCCCGAACGCGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGTGCTTg < 2:4764990/100‑1 (MQ=255)
cccGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGa > 2:2311995/1‑100 (MQ=255)
cccGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGa > 1:4408012/1‑100 (MQ=255)
cccGAACGGGTGCGTCAGGTGCGCGCGCAACTGCCCGACTTCAACAACCGCCGCTTTGCGCCGCCGCACTTATTATGATGTTTTTTTACTCGGCGCTTgc > 2:654225/1‑99 (MQ=255)
ccGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACATCCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGAt < 2:1283038/100‑1 (MQ=255)
cGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGAtt > 2:3177170/1‑100 (MQ=255)
aaCGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCa < 2:4702909/100‑1 (MQ=255)
aCGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCAc < 2:4568875/100‑1 (MQ=255)
gtgCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTg > 1:896796/1‑100 (MQ=255)
gtgCGTCAGGTGAGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTg > 1:4789476/1‑100 (MQ=255)
tgCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGt < 1:2830955/100‑1 (MQ=255)
tgCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGt > 1:1965115/1‑100 (MQ=255)
tgCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGt < 1:4381723/100‑1 (MQ=255)
tgCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGt < 1:426476/100‑1 (MQ=255)
tgCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGCCCCTTTGCGCCGCAGCAATCATTATGCTGACTTTTTACTCGGCGCTTGATTCACCCTGt > 1:3284358/1‑100 (MQ=255)
gCGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGtt < 2:4815258/100‑1 (MQ=255)
gCGTCAGGTGCGCGCGCAACTGCCCGTCCTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGtt < 1:2658162/100‑1 (MQ=255)
ggTCAGGTGGGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTTTTATGGTGTTTTTTTACTCGGCGCTTTGTTCACCTTGTTa < 2:4199352/99‑1 (MQ=255)
cGTCAGGTGCGCGCGCACCTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTa < 2:3253838/100‑1 (MQ=255)
cGTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTa < 2:4323573/100‑1 (MQ=255)
gTCAGGTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTAc < 1:726862/100‑1 (MQ=255)
ggTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGAt < 2:3040931/100‑1 (MQ=255)
ggTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGAt < 1:4004869/100‑1 (MQ=255)
gTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGAtt < 2:3812936/100‑1 (MQ=255)
gTGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGAtt < 1:2969470/100‑1 (MQ=255)
tGCGCGCGCAACTGCCCGTCTTCAACAACCGTCGCTTAGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTg > 2:5374826/1‑100 (MQ=255)
gcgcgcgcAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGc < 2:5020869/100‑1 (MQ=255)
gcgcgcgcAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGc < 1:2385687/100‑1 (MQ=255)
cgcgcgcAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCt > 2:2985136/1‑100 (MQ=255)
gcgcgcAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTa < 2:2584885/100‑1 (MQ=255)
gcgcgcAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTa > 2:4903437/1‑100 (MQ=255)
cgcAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATtg < 1:3776956/100‑1 (MQ=255)
gcAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATtgt < 2:1048794/100‑1 (MQ=255)
cAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTTTTCTGCGCTTGATTCACGTTGTTACAGATTGTTATtgtg > 2:812029/1‑100 (MQ=255)
cAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATtgtg > 2:3061435/1‑100 (MQ=255)
cAACTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATtgtg > 1:3413424/1‑100 (MQ=255)
aaCTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATtgtgt > 1:4044381/1‑100 (MQ=255)
aCTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATtgtgtg < 2:2262483/100‑1 (MQ=255)
aCTGCCCGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATtgtgtg > 1:282414/1‑100 (MQ=255)
cccGTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATTGTGTgcgcg > 1:1688989/1‑100 (MQ=255)
gTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATTGTGTGCGCGCGt > 1:1812183/1‑100 (MQ=255)
gTCTTCAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATTGTGTGCGCGCGt > 1:3878356/1‑100 (MQ=255)
|
CGTCACCATTGCGGCAGCGTCAGAAATGCCTGCACTCATTATGGCGGAAGTGACGCCCGAACGTGTGCGTCAGGTGCGCGCGCAACTGCCCGTCTTAAACAACCGTCGCTTTGCGCCGCCGCAATTATTATGATGTTTTTTTACTCGGCGCTTGATTCACCTTGTTACAGATTGCTATTGTGTGCGCGCGTC > NC_000913/658686‑658877
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
