Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,668,951 |
T→G |
R214R (CGA→CGC) |
ynfL ← |
LysR family putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,668,951 | 0 | T | G | 98.1%
| 545.1
/ ‑3.7
| 156 | R214R (CGA→CGC) | ynfL | LysR family putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base G (95/57); total (98/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 156 total aligned reads displayed.
CAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGTCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTACATT > NC_000913/1668854‑1669046
|
cAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCg < 1:3014391/100‑1 (MQ=255)
ggCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCa > 1:677561/1‑100 (MQ=255)
ggCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCa > 1:5179408/1‑100 (MQ=255)
gCAAAATTGAAACACCCAGATCGGCGGCAACCAGACCGATGATGGTCAGTGCCTGGCACACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCAt > 2:5480392/1‑100 (MQ=255)
gCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCAt < 1:138507/100‑1 (MQ=255)
cAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATc > 2:3763606/1‑100 (MQ=255)
cAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATc > 1:4693449/1‑100 (MQ=255)
cAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATc > 2:1443649/1‑100 (MQ=255)
aaaaTTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCa < 1:3158962/100‑1 (MQ=255)
aaaaTTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCa > 1:3016154/1‑100 (MQ=255)
aTTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGcc > 2:5453845/1‑100 (MQ=255)
aTTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGcc < 1:2067601/100‑1 (MQ=255)
aTTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGcc > 1:899187/1‑100 (MQ=255)
tGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCg < 1:2175062/100‑1 (MQ=255)
aaaCACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCgag < 1:4282921/100‑1 (MQ=255)
aaaCACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCgag < 1:3798467/100‑1 (MQ=255)
aaCACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGTCGCATCAGCCCgaga > 1:886454/1‑100 (MQ=255)
aaCACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCgaga > 1:144673/1‑100 (MQ=255)
acacCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGaa < 1:2678151/100‑1 (MQ=255)
acacCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGaa < 2:1727931/100‑1 (MQ=255)
acCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAata > 1:1318517/1‑100 (MQ=255)
acCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAata > 2:785453/1‑100 (MQ=255)
cccAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAatat > 2:2925541/1‑100 (MQ=255)
cccAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAatat < 2:3369448/100‑1 (MQ=255)
cccAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAatat > 2:2007583/1‑100 (MQ=255)
ccAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATc > 2:797667/1‑100 (MQ=255)
gACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTc < 1:5003231/100‑1 (MQ=255)
aCCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCa < 1:3962554/100‑1 (MQ=255)
ccGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCAt > 1:3817964/1‑100 (MQ=255)
ggcggAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATAc < 1:1179006/100‑1 (MQ=255)
ggcggAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATAc > 1:192444/1‑100 (MQ=255)
ggAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTACCGGCGCCTCAGCCCGAGAATATCGTCATACAGc > 2:3706597/1‑100 (MQ=255)
aaaCCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGccc > 2:4014959/1‑100 (MQ=255)
ccAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGt > 1:1797800/1‑100 (MQ=255)
ccAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGt > 2:3180282/1‑100 (MQ=255)
cAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTc > 2:2164617/1‑100 (MQ=255)
aGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTcc > 2:415492/1‑100 (MQ=255)
gACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTccc > 1:3617502/1‑100 (MQ=255)
ccGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGa > 1:228221/1‑100 (MQ=255)
tgatgGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCGGTCCCGACGTg > 2:3594371/1‑100 (MQ=255)
tgGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCgg > 2:1396572/1‑100 (MQ=255)
ggTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGa > 2:3276300/1‑100 (MQ=255)
gTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGAt > 1:278777/1‑100 (MQ=255)
gTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATCGTAACGACGCAGCAGCCCGAGAATATATTAATACATCCATGTCCCGACGTGCGGAt > 2:3105425/1‑100 (MQ=255)
tCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATc > 1:4236244/1‑100 (MQ=255)
tCATTGCCTCGCCCACCTCCTGAGCGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATc < 1:1633871/100‑1 (MQ=255)
cATTGCCTCGCCCACCTCCTGAGTGATGGCGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCa > 2:4441981/1‑100 (MQ=255)
cATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCa > 1:5257244/1‑100 (MQ=255)
nttGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCaa > 1:4427540/2‑100 (MQ=255)
aTTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCaa < 2:1059931/100‑1 (MQ=255)
tGCCTCGCTCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGGGCGGATCaaaa > 2:5276644/1‑100 (MQ=255)
tGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCaaac > 2:2890163/1‑99 (MQ=255)
tGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCaaaa < 2:3986088/100‑1 (MQ=255)
gCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCaaaaa > 1:3276551/1‑100 (MQ=255)
gCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCaaaaa > 1:608669/1‑100 (MQ=255)
cTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAg < 1:4019984/100‑1 (MQ=255)
cTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAg > 2:4445986/1‑100 (MQ=255)
cTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAACATCGTCATACAGCCCTGTCCCGACCTGGGGATCAACAAAg > 2:1146299/1‑100 (MQ=255)
cGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGAc > 1:2469158/1‑100 (MQ=255)
cccACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACaa > 2:1584135/1‑100 (MQ=255)
cACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAg > 2:4206442/1‑100 (MQ=255)
aCCTCCTGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAgg > 2:2356786/1‑100 (MQ=255)
ctcctGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGt < 1:452721/100‑1 (MQ=255)
ctcctGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGt > 2:1703422/1‑100 (MQ=255)
tcctGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGtt > 1:2845236/1‑100 (MQ=255)
cctGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTc < 1:2878587/100‑1 (MQ=255)
ctGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGtaga > 1:5345555/1‑97 (MQ=255)
ctGAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCt > 1:1401600/1‑100 (MQ=255)
gAGTGATGACGGGGGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCttt < 2:4729349/100‑1 (MQ=255)
gAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCttt > 2:2121826/1‑100 (MQ=255)
gAGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCttt > 2:2643573/1‑100 (MQ=255)
aGTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTc < 2:887312/100‑1 (MQ=255)
gTGATGACGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGATTATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGGTCTTTCg > 1:5370479/1‑100 (MQ=255)
gatgaCGGGCGTCAAATGGTAACGTCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGcc > 2:4360607/1‑100 (MQ=255)
gatgaCGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGcc < 1:2447043/100‑1 (MQ=255)
gatgaCGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGcc > 2:3638785/1‑100 (MQ=255)
atgaCGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCa > 2:5041601/1‑100 (MQ=255)
gaCGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGt > 2:2533045/1‑100 (MQ=255)
aCGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGtt < 2:2945362/100‑1 (MQ=255)
aCGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGACCTGTGCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGtt < 2:1087747/100‑1 (MQ=255)
cGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTc < 1:1036968/100‑1 (MQ=255)
cGGGCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTc < 1:1038244/100‑1 (MQ=255)
ggCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTcag < 2:63991/100‑1 (MQ=255)
gCGTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTcagc > 2:4726141/1‑100 (MQ=255)
cGTCAAACGGTAACGGCTCATCAGCCCGAGAACATCGTCATACAACCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTcagcc < 1:5109541/100‑1 (MQ=255)
cGTCAAACGGTAACGGCCCATCAGCCCGAGAACATCGTCATACATCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTcagcc < 1:5112153/100‑1 (MQ=255)
gTCAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTcagcca > 1:1680755/1‑100 (MQ=255)
cAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTcagccagc < 1:5527487/100‑1 (MQ=255)
cAAATGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAAGGTTCTTTCGCCAGTTcagccagc > 1:1501836/1‑100 (MQ=255)
aaTGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGt > 1:335531/1‑100 (MQ=255)
aaTGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGt < 1:3280311/100‑1 (MQ=255)
aTGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGtt > 1:4046920/1‑100 (MQ=255)
tGGTACCGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATTAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTa < 1:5277150/100‑1 (MQ=255)
tGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTa < 2:2351252/100‑1 (MQ=255)
tGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATAAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTa < 2:2818153/100‑1 (MQ=255)
tGGTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATAAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTa < 2:2003064/100‑1 (MQ=255)
gTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTACa > 2:2404213/1‑100 (MQ=255)
gTAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTACa > 2:1009889/1‑100 (MQ=255)
tAACGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTACAt > 1:1947852/1‑100 (MQ=255)
aaCGGCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGCGTTCTTTCGCCAGTTCAGCCAGCGCTACAtt > 2:308886/1‑100 (MQ=255)
|
CAGGCAAAATTGAAACACCCAGACCGGCGGAAACCAGACCGATGATGGTCATTGCCTCGCCCACCTCCTGAGTGATGACGGGCGTCAAATGGTAACGTCGCATCAGCCCGAGAATATCGTCATACAGCCCTGTCCCGACGTGCGGATCAAAAAAGACAAAGGGTTCTTTCGCCAGTTCAGCCAGCGTTACATT > NC_000913/1668854‑1669046
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
