Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,669,235 |
A→C |
Y120D (TAT→GAT) |
ynfL ← |
LysR family putative transcriptional regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,669,235 | 0 | A | C | 98.5%
| 697.8
/ ‑2.2
| 199 | Y120D (TAT→GAT) | ynfL | LysR family putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/3); new base C (107/89); total (107/92) |
| Fisher's exact test for biased strand distribution p-value = 9.71e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 205 total aligned reads displayed.
GTGTTACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATAATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGATG > NC_000913/1669138‑1669331
|
gtgtTACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGTGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAACGGACATCAGGATCAt > 2:317120/1‑100 (MQ=255)
gtgtTACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCAt < 1:2187342/100‑1 (MQ=255)
gtgtTACGCAGCAATCCCATATCCAGCGTTCCTTAAATGAGAGGAGCGATTTGCTCGCGAGGGTTCATTTCGCGGGTTTGTAAATAGACATCAGGATCAt < 2:5297970/100‑1 (MQ=255)
gtTACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGAtcatca > 1:1241596/1‑100 (MQ=255)
gtTACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGAtcatca > 2:3867163/1‑100 (MQ=255)
gtTACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGAtcatca < 1:311812/100‑1 (MQ=255)
ttACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCAc < 2:276118/100‑1 (MQ=255)
ttACGCAGCAATCCCATATCCAGCGTTCCTTCAATCAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCAc > 2:5359747/1‑100 (MQ=255)
tACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACg < 2:2834788/100‑1 (MQ=255)
tACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACg > 2:4822804/1‑100 (MQ=255)
aCGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACgg > 1:2019989/1‑100 (MQ=255)
cGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGc > 1:5039898/1‑100 (MQ=255)
cGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGc > 2:1535797/1‑100 (MQ=255)
cGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGc < 1:4244156/100‑1 (MQ=255)
cGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGc > 1:3671823/1‑100 (MQ=255)
gcagcaATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCg < 1:3993176/100‑1 (MQ=255)
cagcaATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGa > 2:1871025/1‑100 (MQ=255)
cagcaATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGa > 2:3115753/1‑100 (MQ=255)
caATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAAc < 2:1808177/100‑1 (MQ=255)
caATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAAc < 2:2695090/100‑1 (MQ=255)
aTCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAg < 1:3179207/100‑1 (MQ=255)
tCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGc < 2:1589190/100‑1 (MQ=255)
tccATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCg > 1:1148373/2‑100 (MQ=255)
gccATATCCCGCGTTCCTTCAATGAGCGGAGAGATTTGCTCGCTATTCTCCATTTCGCGGGTTTGTAAGTGGACATCAGGATCATCACGGGGCAACGGCg < 2:4530940/99‑1 (MQ=255)
cccATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCg < 1:5418424/100‑1 (MQ=255)
cccATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCg > 2:4383705/1‑100 (MQ=255)
ccATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGa > 2:3084453/1‑100 (MQ=255)
atatCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATa > 1:2767246/1‑100 (MQ=255)
tCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACg > 2:1686029/1‑100 (MQ=255)
cacAGCGTTACTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACg < 1:2933057/98‑1 (MQ=255)
ccAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGt < 2:829653/100‑1 (MQ=255)
cAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTa > 1:2426585/1‑100 (MQ=255)
cAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTa < 2:2455244/100‑1 (MQ=255)
gCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATc < 1:4069707/100‑1 (MQ=255)
gCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATc < 2:1302042/100‑1 (MQ=255)
gTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCgg < 2:3832413/100‑1 (MQ=255)
gTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCgg < 2:1777372/100‑1 (MQ=255)
tCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGac < 2:1191618/100‑1 (MQ=255)
cTTCAATTAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAGCAGCGATAACGTATCGGacac > 2:3038673/1‑100 (MQ=255)
cTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGacac < 2:1476313/100‑1 (MQ=255)
agcggagcgATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGaa > 1:5551378/1‑100 (MQ=255)
gcggagcgATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAAt < 1:189958/100‑1 (MQ=255)
cggagcgATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATa < 2:143252/100‑1 (MQ=255)
gcgATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAg < 1:990243/100‑1 (MQ=255)
cgATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAgg < 2:2225013/100‑1 (MQ=255)
cgATGTGCTCGCGAGTGTTCAGTTCGCGAGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAgg < 2:4205576/100‑1 (MQ=255)
aTTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAg > 1:242219/1‑100 (MQ=255)
aTTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAg < 2:1215128/100‑1 (MQ=255)
aTTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAg < 1:3902839/100‑1 (MQ=255)
tGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCcg < 2:546595/100‑1 (MQ=255)
cTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCcgac > 1:3244883/1‑100 (MQ=255)
cTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCcgac > 2:2631949/1‑100 (MQ=255)
tCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGACCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCcgacg < 1:1055557/100‑1 (MQ=255)
cgcgAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCcgacga > 1:3507478/1‑100 (MQ=255)
cgAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAg < 2:4728093/100‑1 (MQ=255)
cgAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAg > 1:4538042/1‑100 (MQ=255)
tgtTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTaaa < 1:516363/100‑1 (MQ=255)
nttCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTaaaa > 1:1576088/2‑100 (MQ=255)
gtTCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGCaaac < 2:2144659/100‑2 (MQ=255)
ttCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAAc < 2:1034694/100‑1 (MQ=255)
ttCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAAc > 1:1988735/1‑100 (MQ=255)
ttCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAAc > 2:3542743/1‑100 (MQ=255)
tCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAAcc < 2:1967156/100‑1 (MQ=255)
tCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAAcc < 2:239839/100‑1 (MQ=255)
tCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAAcc > 1:5503847/1‑100 (MQ=255)
tCATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAAcc > 2:49661/1‑100 (MQ=255)
cATTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCa > 1:4603299/1‑100 (MQ=255)
aTTTCGCGGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCaa < 1:2352994/100‑1 (MQ=255)
tttCGCGGGTTTGTAAATGGACATAAGGCTCATGACGGCGTAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAAt > 2:1971082/1‑100 (MQ=255)
cgcgGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATgcg > 1:742978/1‑100 (MQ=255)
cgcgGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATgcg > 1:754392/1‑100 (MQ=255)
cgcgGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATgcg > 1:1278433/1‑100 (MQ=255)
cgcgGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGAAAAACCAATgcg > 1:4488160/1‑100 (MQ=255)
gcgGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATgcgc > 1:2328082/1‑100 (MQ=255)
gcgGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATgcgc < 2:5193479/100‑1 (MQ=255)
cgGGTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCa < 1:1477528/100‑1 (MQ=255)
ggTTTGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAAc < 2:1056990/100‑1 (MQ=255)
gTTTGTAAATGGACATCAGGTTCATAACAGCGAAACAGCGATAACGTATCGGACACCGCCCAAAAACAATGAGCCGACGACGTACAACCACGCCGCAAcc > 2:4426653/1‑99 (MQ=255)
tttGTAAATGGACATCA‑GATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTcc > 2:1376694/1‑100 (MQ=255)
ttGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTcc > 1:1755371/1‑100 (MQ=255)
tGTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTccc > 2:396463/1‑100 (MQ=255)
gTAAATGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTcccc < 1:5460981/100‑1 (MQ=255)
aaTGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGc > 1:1391047/1‑100 (MQ=255)
tGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCtt < 2:3787433/100‑1 (MQ=255)
tGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCtt < 1:940534/100‑1 (MQ=255)
tGGACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCtt < 1:3195599/100‑1 (MQ=255)
ggACATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTc < 1:3734458/100‑1 (MQ=255)
atcttCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCa < 1:3301379/96‑1 (MQ=255)
aCATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCAc > 2:3457825/1‑100 (MQ=255)
cATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGTCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCAcc > 1:4884937/1‑100 (MQ=255)
cATCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCAcc > 1:3136174/1‑100 (MQ=255)
aTCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCAccc > 1:1498317/1‑100 (MQ=255)
aTCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCAccc > 2:4791966/1‑100 (MQ=255)
tCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCaagat > 2:3270727/1‑96 (MQ=255)
tCAGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCt > 1:3061251/1‑100 (MQ=255)
aGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGa > 1:894823/1‑100 (MQ=255)
aGGATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGa > 1:1847595/1‑100 (MQ=255)
ggATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGAt > 2:842449/1‑100 (MQ=255)
ggATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGAt > 2:5147389/1‑100 (MQ=255)
gATCATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGATg > 2:3361740/1‑100 (MQ=255)
|
GTGTTACGCAGCAATCCCATATCCAGCGTTCCTTCAATGAGCGGAGCGATTTGCTCGCGAGTGTTCATTTCGCGGGTTTGTAAATGGACATCAGGATAATCACGGCGAAACAGCGATAACGTATCGGACACCGCCCGAATAAAAGGAGCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGATG > NC_000913/1669138‑1669331
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
