Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,281,112 |
A→C |
I161L (ATC→CTC) |
yejH → |
putative ATP‑dependent DNA or RNA helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,281,112 | 0 | A | C | 98.2%
| 582.1
/ ‑4.2
| 163 | I161L (ATC→CTC) | yejH | putative ATP‑dependent DNA or RNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (2/1); new base C (77/83); total (79/84) |
| Fisher's exact test for biased strand distribution p-value = 6.11e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 168 total aligned reads displayed.
CCAGTATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGATCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGATTAAAC > NC_000913/2281015‑2281208
|
ccAGTATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTc < 2:2975519/100‑1 (MQ=255)
cAGTATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGctct > 1:1685557/1‑100 (MQ=255)
aGTATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTa < 2:383502/100‑1 (MQ=255)
gTATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTAc > 2:5029450/1‑100 (MQ=255)
tATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTAcc < 1:1153774/100‑1 (MQ=255)
tATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTAcc < 1:170302/100‑1 (MQ=255)
aTCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCa > 1:4622382/1‑100 (MQ=255)
tCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAg > 1:1889552/1‑100 (MQ=255)
tCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAg < 1:4897358/100‑1 (MQ=255)
tCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAg > 1:5088947/1‑100 (MQ=255)
cAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGt > 1:1804123/1‑100 (MQ=255)
aGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGtt > 2:3317040/1‑100 (MQ=255)
gCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGttt > 1:3484941/1‑100 (MQ=255)
gCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGttt > 1:389482/1‑100 (MQ=255)
aaaTCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCa < 2:751222/100‑1 (MQ=255)
aaTCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCAt < 1:871618/100‑1 (MQ=255)
tCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTa < 2:1203896/100‑1 (MQ=255)
tCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTa < 1:1904741/100‑1 (MQ=255)
ccTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTAt > 2:105771/1‑100 (MQ=255)
ctcactcaCCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATc > 1:3102787/1‑100 (MQ=255)
tcgctcacctcacAAAAGTCAATCCCCACTTACCCCAGCGAGGGCTGATTGCCACACCTTTTCGATTGGACAAATGCCGGCTCTACCAGTTTCATTATCa < 2:1310221/97‑1 (MQ=255)
cactcacCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCAc < 2:6677/100‑1 (MQ=255)
cactcacCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCAc < 2:6599/100‑1 (MQ=255)
actcacCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACg < 2:2726251/100‑1 (MQ=255)
ctcacCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACgg < 2:5429027/100‑1 (MQ=255)
cacCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAACGGCTGGCTCTACCAGTTTCATTATCCCGGCa > 2:4146284/1‑100 (MQ=255)
cacCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCa < 1:3587270/100‑1 (MQ=255)
cacCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCa < 1:2740216/100‑1 (MQ=255)
acCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCAt < 2:4557438/100‑1 (MQ=255)
acCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCAt > 2:3852885/1‑100 (MQ=255)
acCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCAt < 2:4528308/100‑1 (MQ=255)
ccTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATg > 2:1819204/1‑100 (MQ=255)
tGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAATGCTGGCTCTACCAGTTTCATTATCACGGCATGGt > 2:4191177/1‑100 (MQ=255)
tGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGt > 2:3331673/1‑100 (MQ=255)
tGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGt < 1:3868114/100‑1 (MQ=255)
gACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTCCCAGTTTCATTATCACGGCATGGTa > 2:1328228/1‑100 (MQ=255)
gACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTa < 2:1772844/100‑1 (MQ=255)
aaaGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTAcgcg < 2:4531992/100‑1 (MQ=255)
aaaGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTAcgcg > 2:1979845/1‑100 (MQ=255)
aaaGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTAcgcg > 2:4621559/1‑100 (MQ=255)
aaGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACgcgg > 2:1885789/1‑100 (MQ=255)
aGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACgcggc > 2:3645758/1‑100 (MQ=255)
aGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACgcggc < 1:2836890/100‑1 (MQ=255)
aaTCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAATGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATg < 1:4229653/100‑1 (MQ=255)
aaTCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATg < 2:3083329/100‑1 (MQ=255)
tCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATgag < 1:516548/100‑1 (MQ=255)
ccccACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATgaga > 2:300151/1‑100 (MQ=255)
ccccACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATgaga < 2:2329021/100‑1 (MQ=255)
cccACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGCTGAGaa > 2:4703761/1‑100 (MQ=255)
cccACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGaa < 1:661787/100‑1 (MQ=255)
cccACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGaa < 1:3679648/100‑1 (MQ=255)
cccACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGaa < 2:1530369/100‑1 (MQ=255)
cccACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGaa < 1:1059988/100‑1 (MQ=255)
ccACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGaaa > 1:784763/1‑100 (MQ=255)
cACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAg < 2:1783658/100‑1 (MQ=255)
aCTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGc > 2:4269125/1‑100 (MQ=255)
cTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGcc > 1:2383024/1‑100 (MQ=255)
ttACGCCGGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGccc < 1:103016/100‑1 (MQ=255)
tACCCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTGCGCGGCGATGAGAAAGCCCt > 2:5052332/1‑100 (MQ=255)
aCGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGcccag > 2:1506274/1‑98 (MQ=255)
cGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCttt > 1:1735518/1‑100 (MQ=255)
ccggctgGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTc < 2:4754078/97‑1 (MQ=255)
ccTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTc > 1:3374120/1‑100 (MQ=255)
ctgctgGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTcc > 1:558477/1‑100 (MQ=255)
gctgGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCgn < 1:371588/100‑2 (MQ=255)
ctgGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTg < 1:3728820/100‑1 (MQ=255)
ggggCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGAc < 1:4273484/100‑1 (MQ=255)
ggggCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGAc > 1:3832160/1‑100 (MQ=255)
gCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGc > 1:1957215/1‑100 (MQ=255)
gCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGc > 2:1870348/1‑100 (MQ=255)
gACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCAtt > 2:1059778/1‑100 (MQ=255)
cTGCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTa < 1:3994022/100‑1 (MQ=255)
cTGCCACGCCTTTTCGATCGGGCAAAGGCTGGCTCTACCAGTTTCATTATTACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTa < 1:5291394/100‑1 (MQ=255)
tccACGCGTTGTCGTTAGGGCAAACGCTGGCTCTACCATGTTCATTATCACGTCATGGTACGCGGCGATCAGAAAGCCCTTTTCCGTGACTCCATTTAtn < 2:5489182/99‑2 (MQ=255)
gCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGCCTGCCTGTATg > 1:4153640/1‑100 (MQ=255)
gCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCAtagatc > 1:4139762/1‑95 (MQ=255)
gCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATg < 2:5164955/100‑1 (MQ=255)
gCCACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATg > 1:4343343/1‑100 (MQ=255)
cACGCCTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGTAAGCCCTTTTCCGTGACTGCATTTATGAg > 1:4782880/1‑100 (MQ=255)
cTTTTCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGGTGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGcc > 1:1402113/1‑100 (MQ=255)
tttCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGc < 1:1457465/100‑1 (MQ=255)
tttCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGc > 1:3097983/1‑100 (MQ=255)
tCGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTg < 1:2568255/100‑1 (MQ=255)
cGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGc > 1:2067784/1‑100 (MQ=255)
cGATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGc < 2:2282839/100‑1 (MQ=255)
gATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCg < 2:6848/100‑1 (MQ=255)
gATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCg < 2:3122784/100‑1 (MQ=255)
gATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCg < 1:2609128/100‑1 (MQ=255)
gATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCg < 1:3888441/100‑1 (MQ=255)
gATTGGGCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCg > 1:2268123/1‑100 (MQ=255)
ggCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTtata > 2:2500623/1‑100 (MQ=255)
ggCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTtata > 2:5363929/1‑100 (MQ=255)
gCAAAGGCTGGCTCTACCAGTTTCATTGTCGCGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGAGTGCATTTATGCGCTGCCGCTGCGTTatat < 1:1517244/100‑1 (MQ=255)
gCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTatat > 2:2817711/1‑100 (MQ=255)
gCAAAGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTatat > 1:2986773/1‑100 (MQ=255)
aaaGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGa > 2:2056219/1‑100 (MQ=255)
aaaGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGa > 1:5532984/1‑100 (MQ=255)
aGGCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGAtt < 2:3824455/100‑1 (MQ=255)
gCTGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGATTaa > 2:1401298/1‑100 (MQ=255)
tGGCTCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGATTAAac > 2:2152513/1‑100 (MQ=255)
|
CCAGTATCAGCAAATCCTCACTCACCTGACAAAAGTGAATCCCCACTTACGCCTGCTGGGGCTGACTGCCACGCCTTTTCGATTGGGCAAAGGCTGGATCTACCAGTTTCATTATCACGGCATGGTACGCGGCGATGAGAAAGCCCTTTTCCGTGACTGCATTTATGAGCTGCCGCTGCGTTATATGATTAAAC > NC_000913/2281015‑2281208
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
