Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,269,654 |
T→G |
F81V (TTC→GTC) |
aphA → |
acid phosphatase/phosphotransferase, class B, non‑specific |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,269,654 | 0 | T | G | 97.2%
| 706.2
/ 2.1
| 219 | F81V (TTC→GTC) | aphA | acid phosphatase/phosphotransferase, class B, non‑specific |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base G (112/100); total (116/103) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 |
Only 100 of 219 total aligned reads displayed.
GGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCTTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTC > NC_000913/4269557‑4269749
|
gTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCt < 2:1017159/100‑1 (MQ=255)
gTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCt > 2:3259127/1‑100 (MQ=255)
tttCGGTCGCACAAATTGAAAATAGCCTCGCAGGTCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTg < 1:2781399/100‑1 (MQ=255)
tttCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTg > 2:1344334/1‑100 (MQ=255)
cGGTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGGGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGGCTGgcg > 1:2695669/1‑100 (MQ=255)
ggTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGgcgc < 1:1232875/100‑1 (MQ=255)
ntCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGcgcg > 1:4438797/2‑100 (MQ=255)
gTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGcgcg > 1:45434/1‑100 (MQ=255)
cacaAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaa > 2:4211348/1‑100 (MQ=255)
acaAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaa < 2:321245/100‑1 (MQ=255)
caAGTTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTACAGTCCGGGCGTCTGCCGCGGCaaaa > 2:4061/1‑100 (MQ=255)
caAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaa > 2:773141/1‑100 (MQ=255)
caAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaa > 1:3716929/1‑100 (MQ=255)
caAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaa > 2:5393103/1‑100 (MQ=255)
aaaTTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaaa > 1:306397/1‑100 (MQ=255)
aaTTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaaaa > 1:5161105/1‑100 (MQ=255)
aaTTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaaaa > 1:3851407/1‑100 (MQ=255)
aaTTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaaaa > 1:1150583/1‑100 (MQ=255)
aTTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATCTCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaaaaa > 2:3768004/1‑100 (MQ=255)
aTTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCaaaaaaa < 1:4674263/100‑1 (MQ=255)
aTTGAAAATAGCCTCGCAGGGCGACCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCATTCCGGGCGTGTGGCGCGGCaaaaaaa > 2:4609999/1‑100 (MQ=255)
ttGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAAc < 2:488974/100‑1 (MQ=255)
tGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAAcc > 2:3895109/1‑100 (MQ=255)
gAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTATTTCCAGTCCAGGCTTCTGGCGCGGCAAAAAAACCt > 2:5198114/1‑100 (MQ=255)
aaaaTAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGGTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGGTTGGCGCGGCAAAAAAACCtt > 2:3957524/1‑100 (MQ=255)
aaaTCGCCTCGCAGGGCGTCCGCCCATGGCGGCGGGGTTTGCTATCGATGACACGGTACTTTTTTCCAGTACGGGCCTCCAGTGCGGCCAAAAACCCtcc > 2:4328407/1‑98 (MQ=255)
aaaTAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTtc < 1:344434/100‑1 (MQ=255)
aaaTAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTtc > 1:3191827/1‑100 (MQ=255)
aaaTAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTtc > 1:5468497/1‑100 (MQ=255)
aaaTAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTtc < 1:4780395/100‑1 (MQ=255)
aaaTAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTtc > 2:3098182/1‑100 (MQ=255)
aTAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTtctc < 1:669932/100‑1 (MQ=255)
gCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGcc < 2:1251173/100‑1 (MQ=255)
cTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAg < 1:2123993/100‑1 (MQ=255)
tCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGa > 2:223617/1‑100 (MQ=255)
aGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGc > 2:2989217/1‑100 (MQ=255)
ggCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGa > 1:3805346/1‑100 (MQ=255)
ggCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGa > 1:4270131/1‑100 (MQ=255)
gCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGaa < 1:1364421/100‑1 (MQ=255)
gCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGaa < 2:4396774/100‑1 (MQ=255)
gCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGaa > 1:406937/1‑100 (MQ=255)
cGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAg < 2:5006595/100‑1 (MQ=255)
gTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGa < 1:2424209/100‑1 (MQ=255)
cGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTTTTTTTCTTGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGGAAGCGAAGATTa > 2:1421501/1‑100 (MQ=255)
cGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTa > 2:762554/1‑100 (MQ=255)
cGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTa > 2:3507512/1‑100 (MQ=255)
cGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTAAAGAAAGAAAAAAAAACCTTCTCGCCAGAAAGCGAAGATTa < 2:1641585/100‑1 (MQ=255)
cggtaggCAGTGGGGTCTGAAATCGAAGAAACGATACTTATTTCGAGTACAGGGTTATGGGAAGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATc < 2:391777/95‑1 (MQ=255)
ccAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATc < 2:2628815/100‑1 (MQ=255)
tgggggCGGTGGGGGTGGATATCGATGACAGGGTACTTTCTTGCGGTGCGGGTGTCTGGCTAGGCAGAAAGACCTTCTCGCCAGAAAGCGAAGATTATCt < 2:4759959/96‑1 (MQ=255)
cAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCt < 2:1763849/100‑1 (MQ=255)
aaTGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTg > 1:2617568/1‑100 (MQ=255)
aTGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGa > 1:3310085/1‑100 (MQ=255)
tGGCGGTGGGGTGTGATATCGATGACACGGTACTTTTTTCGAGTCGGGGGGGCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGaa < 2:4917287/100‑1 (MQ=255)
ggCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGaaa < 1:501041/100‑1 (MQ=255)
tGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATcc < 1:1511124/100‑1 (MQ=255)
tGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATcc < 1:1655650/100‑1 (MQ=255)
tGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTAAAGAAAAAAAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATcc < 2:614586/100‑1 (MQ=255)
gggTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCtg < 1:463680/100‑1 (MQ=255)
gggTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCtg > 1:3787284/1‑100 (MQ=255)
ggaattGAAATCGAAGAAACGGTACTTTTTTCCAGTCCGGGCGAAAAAAAAAAAAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCtg < 2:3000524/96‑1 (MQ=255)
ggTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCtgt > 1:83578/1‑100 (MQ=255)
tGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAACCAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTc > 2:1496292/1‑100 (MQ=255)
tGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTc < 2:3727486/100‑1 (MQ=255)
tGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTc < 1:1864105/100‑1 (MQ=255)
gATATCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCt > 1:4142121/1‑100 (MQ=255)
atatCGATGACACGGTACTTTTTTCCAGTCCGGGCTTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTg > 2:3369530/1‑100 (MQ=255)
atatCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTg > 1:1063513/1‑100 (MQ=255)
atCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTggg < 2:3539128/100‑1 (MQ=255)
atCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTggg > 2:5346205/1‑100 (MQ=255)
atCGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTggg > 1:834192/1‑100 (MQ=255)
cGATGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGaa > 1:1971728/1‑100 (MQ=255)
aTGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGaaaa > 2:1852600/1‑100 (MQ=255)
tGACACGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGaaaaa > 2:657646/1‑100 (MQ=255)
acacGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAAt > 2:1940357/1‑100 (MQ=255)
acGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGa < 2:4837575/100‑1 (MQ=255)
cGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGCAAAACTGaa > 1:4189124/1‑100 (MQ=255)
cGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGaa < 2:3697817/100‑1 (MQ=255)
cGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGaa < 1:30828/100‑1 (MQ=255)
cGGTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTAGCTGAAAAATCCTGTGTTCTGGGAAAAAATGaa < 2:5330027/100‑1 (MQ=255)
ggTACTTTTTTCCAGTCCGGGCTTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAAc < 1:727193/100‑1 (MQ=255)
ggTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAAc < 2:468973/100‑1 (MQ=255)
ggTACTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAAc < 2:824856/100‑1 (MQ=255)
ggTACTTTTTTCCAGTCCGGGCGTAAAAAAAAAAAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAAc < 2:339588/100‑1 (MQ=255)
aCTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAAt < 1:1012902/100‑1 (MQ=255)
cTTTTTTCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGTAGGATATCTGAAAAATGCTGTGTTCTGGGAAAAAATGAACAATg > 2:5248863/1‑100 (MQ=255)
ttttttCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATgg < 1:4170885/100‑1 (MQ=255)
ttttaCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCTAAGATTATCTGAAAAATCCTGCGCTCTGGGAAAAAATGAACAATGGc < 1:4986085/100‑1 (MQ=255)
gatctgTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTgg < 1:1847565/95‑1 (MQ=255)
tCCAGTCCGGGCGTCTGGCGCGGCAAAAAACCCTTCACGCCAGAAAGCGAAGATTATCTGAAAAATCCTAAAAAAAAAAAAAAAATGAACAATGGCTggg < 2:2669653/100‑1 (MQ=255)
tCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTggg < 1:3616728/100‑1 (MQ=255)
tCCAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTggg < 1:5293609/100‑1 (MQ=255)
ccAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGa > 2:394350/1‑100 (MQ=255)
ccAGTCCAGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGa > 2:3173790/1‑100 (MQ=255)
gaGTCGGGGCGTAAGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGATAAATCCTAAAAAAAAAAAAAAAATGAACAATGGCTGGGAt < 2:3883652/99‑1 (MQ=255)
cAGTCCGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGAt > 1:5374570/1‑100 (MQ=255)
agaccGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAACCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATg < 1:1266877/97‑1 (MQ=255)
ccGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAAt > 2:1098643/1‑100 (MQ=255)
cGGGCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAAtt < 1:2486281/100‑1 (MQ=255)
gggCGTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTc < 1:652278/100‑1 (MQ=255)
|
GGTTTCGGTCGCACAAATTGAAAATAGCCTCGCAGGGCGTCCGCCAATGGCGGTGGGGTTTGATATCGATGACACGGTACTTTTTTCCAGTCCGGGCTTCTGGCGCGGCAAAAAAACCTTCTCGCCAGAAAGCGAAGATTATCTGAAAAATCCTGTGTTCTGGGAAAAAATGAACAATGGCTGGGATGAATTC > NC_000913/4269557‑4269749
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
