Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
832,388 |
T→G |
intergenic (+152/+80) |
rhlE → / ← ybiA |
ATP‑dependent RNA helicase/DUF1768 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 832,388 | 0 | T | G | 93.7%
| 516.0
/ 13.4
| 175 | intergenic (+152/+80) | rhlE/ybiA | ATP‑dependent RNA helicase/DUF1768 family protein |
| Reads supporting (aligned to +/- strand): ref base T (5/6); new base G (83/81); total (88/87) |
| Fisher's exact test for biased strand distribution p-value = 7.66e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 |
Only 100 of 176 total aligned reads displayed.
CTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAGCCAAT > NC_000913/832291‑832486
|
cTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAgtt > 1:1005811/1‑100 (MQ=255)
tGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTc < 1:2988738/100‑1 (MQ=255)
aTGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTcac < 2:1268696/100‑1 (MQ=255)
aTGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTcac < 1:142296/100‑1 (MQ=255)
tGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTcaca < 1:3862005/100‑1 (MQ=255)
tGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTcaca < 2:563409/100‑1 (MQ=255)
cgcTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCacaac < 1:721847/100‑1 (MQ=255)
cgcTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCacaac > 2:1633580/1‑100 (MQ=255)
tACGCTTATCAGGCCTACGTGAACTCTGCAATATATTTAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAg > 2:1937420/1‑100 (MQ=255)
tACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAg < 1:2092068/100‑1 (MQ=255)
gCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCAc < 2:3582526/100‑1 (MQ=255)
gCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCAc < 2:264101/100‑1 (MQ=255)
ttATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACtt > 2:763715/1‑100 (MQ=255)
tATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTg > 2:1362342/1‑100 (MQ=255)
tATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTg > 2:3581773/1‑100 (MQ=255)
aTCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGt > 1:3531690/1‑100 (MQ=255)
tCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTc > 1:1955600/1‑100 (MQ=255)
tCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTc < 2:2904392/100‑1 (MQ=255)
tCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTc > 1:2686178/1‑100 (MQ=255)
cAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCa > 2:1439722/1‑100 (MQ=255)
cAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCa < 1:3273234/100‑1 (MQ=255)
aGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAg > 1:518232/1‑100 (MQ=255)
aGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAg > 2:1786624/1‑100 (MQ=255)
ggCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGc < 2:1733062/100‑1 (MQ=255)
gCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCa > 1:2766333/1‑100 (MQ=255)
tACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAAtt < 1:2906399/100‑1 (MQ=255)
aCGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAATCACTTGTGAGCAAttt < 2:3866558/100‑1 (MQ=21)
cGTGAACTCTGCAATATATTGAATGTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTg < 2:3989838/100‑1 (MQ=255)
gTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTga < 1:3667498/100‑1 (MQ=255)
gTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTga > 1:1373695/1‑100 (MQ=255)
gTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTga < 1:314973/100‑1 (MQ=255)
tGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTgag < 1:109086/100‑1 (MQ=255)
gAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGCCAGCAATTTgaga > 2:269158/1‑100 (MQ=255)
aCTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAac > 1:1837573/1‑100 (MQ=255)
tGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACgg < 1:3724543/100‑1 (MQ=255)
gCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGATTACGCCGCATCCGTCAGTTCACAACAAGCACTTGTCAGCAATTTCAGAACACggg > 2:3956625/1‑100 (MQ=25)
aaTATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGaa > 2:142703/1‑100 (MQ=255)
gAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTa < 2:1398020/100‑1 (MQ=255)
aaTTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTAt > 1:452890/1‑100 (MQ=255)
gCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGtt < 2:2691232/100‑1 (MQ=255)
gCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGtt < 1:2307314/100‑1 (MQ=255)
cATGCTTTTGTAGTCCTGATAAGGCGCTTACACCACATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATGTATCTGttt > 2:1608587/1‑100 (MQ=255)
cATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGttt > 2:3284949/1‑100 (MQ=255)
aTGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGtttt > 1:1307639/1‑100 (MQ=255)
tGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTa > 1:2847637/1‑100 (MQ=255)
tGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGAACTTGTCAGCAATTTGAGAACAAGGGAAAACATCTACCTGTTTTa > 1:3066147/1‑100 (MQ=25)
tgctttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTAc > 2:920223/4‑100 (MQ=255)
gCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTAc > 1:933870/1‑100 (MQ=255)
gCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTAc < 1:2736442/100‑1 (MQ=255)
cTTTTGTAGGCCGGATAAGGCGTTTACGCTGCATCCGGCAGTTCACAACAAGCACTTGGCAACAATTTGAGAACACGGGAAAAAATTTATCAGTTTTAcc > 1:3907273/1‑100 (MQ=37)
cTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTAcc > 1:3295731/1‑100 (MQ=255)
ttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGcc < 2:2961531/100‑1 (MQ=255)
ttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGcc < 1:3675179/100‑1 (MQ=255)
tGTAGGCCGGATAAGGCGTTTAGGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGccc < 2:2608212/100‑1 (MQ=255)
tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAACATTTATCTGTTTTACCGccc > 2:2904083/1‑100 (MQ=255)
tGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGccc > 1:226653/1‑100 (MQ=255)
gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCa < 1:3510001/100‑1 (MQ=255)
tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCAt < 1:2468542/100‑1 (MQ=255)
tAGGCCGGATAAGGCGTTTACGCCGCAGCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCAt < 2:1714080/100‑1 (MQ=255)
aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATa > 1:2213083/1‑100 (MQ=255)
ggCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATaa > 2:1564466/1‑100 (MQ=255)
gCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACTGGAAAAAATTTATCTGTTTTACCGCCCATAAg < 1:3589957/100‑1 (MQ=255)
gCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAg > 1:2843932/1‑100 (MQ=255)
gCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAg < 1:2371044/100‑1 (MQ=255)
gCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAg < 1:3488752/100‑1 (MQ=255)
gCCGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAg > 1:824455/1‑100 (MQ=255)
ccGGATAAGGCGTTTACGCCGCATGCGGCAGTTCACAACGAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGc < 2:823337/100‑1 (MQ=255)
ccGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGc > 2:2010378/1‑100 (MQ=255)
ccGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGc > 1:583804/1‑100 (MQ=255)
cGGATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTTAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGcc < 2:3620503/100‑1 (MQ=255)
gATAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCAc > 2:740947/1‑100 (MQ=255)
tAAGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCg < 1:916697/100‑1 (MQ=255)
aGGCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCgag > 1:1766560/1‑100 (MQ=255)
ggCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCgaga > 1:197099/1‑100 (MQ=255)
ggCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCgaga > 2:1119092/1‑100 (MQ=255)
ggCGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGAGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCgaga > 1:501823/1‑100 (MQ=255)
cGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGACCACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACg < 1:4011103/100‑1 (MQ=255)
cGTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACg > 1:2046710/1‑100 (MQ=255)
cGTTTACGCCGCATCCGGCAGTTAACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTAACTGTTTTACCGCCCATAAGCCACCGAGACg > 2:2735973/1‑100 (MQ=39)
gTTTACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGt > 2:2805947/1‑100 (MQ=255)
tttACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGtt < 1:3909834/100‑1 (MQ=255)
ttACGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTa > 1:1920916/1‑100 (MQ=255)
aCGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACt < 1:1163389/100‑1 (MQ=255)
aCGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACt < 2:2983761/100‑1 (MQ=255)
aCGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACt < 2:1315172/100‑1 (MQ=255)
aCGCCGCATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACt < 2:2240053/100‑1 (MQ=255)
cgccgcATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAAGACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCAACCGAGACGTTACtt > 2:1048341/1‑100 (MQ=255)
cgccgcATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACtt > 1:1717039/1‑100 (MQ=255)
cgccgcATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACtt > 2:3428492/1‑100 (MQ=255)
gccgcATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGTCCGTCGGCCACCGAGACGTTACTtc < 2:725154/100‑1 (MQ=255)
ccgcATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCACAACCCACCGAGCCGTTACTtct > 2:1944827/1‑100 (MQ=255)
ccgcATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTtct > 2:2499111/1‑100 (MQ=255)
cATCCGGCAGTTCACAACAAGCACTTGTCAGTAATTTGAGAACACGTGAAAAAATTTATCTGTTTTCCCGCCCATAAGCCACCGAGACGTTACTTCTCta < 2:3315814/100‑1 (MQ=255)
cATCCGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCta < 1:1568034/100‑1 (MQ=255)
ccGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAg > 2:420561/1‑100 (MQ=255)
ccGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAg > 1:1223960/1‑100 (MQ=255)
cGGCAGTTCACAAGAAGCACTTGTCAGCAATATGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAGc < 2:3139380/100‑1 (MQ=255)
cGGCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAGc > 2:2101761/1‑100 (MQ=255)
ggCAGTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAGcc < 2:2523751/100‑1 (MQ=255)
aTTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAGCCAAt < 1:1696898/100‑1 (MQ=255)
|
CTGATGCGCTACGCTTATCAGGCCTACGTGAACTCTGCAATATATTGAATTTGCATGCTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATTTCACAACAAGCACTTGTCAGCAATTTGAGAACACGGGAAAAAATTTATCTGTTTTACCGCCCATAAGCCACCGAGACGTTACTTCTCTATAGCCAAT > NC_000913/832291‑832486
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
