Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
930,957 |
A→C |
N2K (AAT→AAG) |
cydD ← |
glutathione/cysteine ABC transporter export permease/ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 930,957 | 0 | A | C | 98.6%
| 468.6
/ ‑1.5
| 140 | N2K (AAT→AAG) | cydD | glutathione/cysteine ABC transporter export permease/ATPase |
| Reads supporting (aligned to +/- strand): ref base A (0/2); new base C (77/60); total (77/63) |
| Fisher's exact test for biased strand distribution p-value = 1.97e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.41e-01 |
Only 100 of 143 total aligned reads displayed.
CGCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCG > NC_000913/930860‑931053
|
gCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATttcttc < 2:1395183/100‑1 (MQ=255)
gCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATttcttc > 1:2972014/1‑100 (MQ=255)
tCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCAt > 2:3392817/1‑100 (MQ=255)
cacaAAGCCCAGCAGACGAGAAATATACAGCCAACGTTGGGAGATGAAGCTTTGGTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCAtt > 2:3738156/1‑100 (MQ=255)
acaAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTg > 1:1131645/1‑100 (MQ=255)
acaAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTg > 1:485651/1‑100 (MQ=255)
caAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGc < 2:753932/100‑1 (MQ=255)
aaaGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCa > 2:431318/1‑100 (MQ=255)
aaGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCAc < 2:3096599/100‑1 (MQ=255)
ccAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGTTGTGTTTTCTTCATTGCACGCtt > 2:1141995/1‑100 (MQ=255)
ccAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCtt > 2:3174053/1‑100 (MQ=255)
cagcagACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTa > 2:951873/1‑100 (MQ=255)
gcagACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGc > 1:1825882/1‑100 (MQ=255)
cagACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCa > 1:898339/1‑100 (MQ=255)
gACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAgg < 1:1082306/100‑1 (MQ=255)
gACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAgg > 2:3247317/1‑100 (MQ=255)
aCGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGt > 1:2588542/1‑100 (MQ=255)
agagATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAg < 1:672615/100‑1 (MQ=255)
gaAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGt > 2:3272072/1‑100 (MQ=255)
aaaTATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGtt > 1:3852195/1‑100 (MQ=255)
atTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCa < 1:2927587/100‑1 (MQ=255)
atTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATCTCTTCATTGCACGCTTAGCAGGTGAGTTATCa < 2:3599976/100‑1 (MQ=255)
tCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGa < 2:2119715/100‑1 (MQ=255)
cAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGaa > 2:3055255/1‑100 (MQ=255)
cAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGaa < 2:2754117/100‑1 (MQ=255)
aGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAat > 2:2654270/1‑100 (MQ=255)
ccAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAatta > 1:3281537/1‑100 (MQ=255)
cAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAattat > 1:1613870/1‑100 (MQ=255)
aCGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTAttt < 1:3419073/100‑1 (MQ=255)
cGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTg > 2:3487888/1‑100 (MQ=255)
gTTGGGCGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGATATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGc > 2:1043206/1‑100 (MQ=255)
gTTGGGAGATGACGCTTTGTTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGc > 2:2344797/1‑100 (MQ=255)
ttGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCa < 2:411109/100‑1 (MQ=255)
ttGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCa > 1:377031/1‑100 (MQ=255)
tGGGAGATGACGCATTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCCTTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTACag > 2:1920889/1‑100 (MQ=255)
gggAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCGTTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCaga > 1:575983/1‑100 (MQ=255)
gggAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCaga < 1:3451791/100‑1 (MQ=255)
ggAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTTTTTTTTTTTCTTCATTACACGCTTATCAGGTGAGTTCTTAGTATTATTTGCaggg > 2:1936351/1‑98 (MQ=255)
tGACGCTTTGCTGTTTTAACCAGCGGGTTACCTCTTTTTGACGCGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATg < 2:3692879/100‑1 (MQ=255)
tGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATg < 1:972193/100‑1 (MQ=255)
tGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATg > 2:2886381/1‑100 (MQ=255)
tGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATg > 1:1292522/1‑100 (MQ=255)
aCGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGtt < 1:2789279/100‑1 (MQ=255)
aCGCTGTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGtt < 2:828217/100‑1 (MQ=255)
cGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTGTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCATAGCAATGTTa < 2:3689776/100‑1 (MQ=255)
cGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTa > 1:2036509/1‑100 (MQ=255)
cGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTa > 1:3051021/1‑100 (MQ=255)
gCTTTTCTGTTTTATCCGGCGGGTTAACTCTTTTTGACTAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTAc < 1:3341028/100‑1 (MQ=255)
gCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTAc < 1:3036802/100‑1 (MQ=255)
gCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTAc < 1:3036793/100‑1 (MQ=255)
gCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACgg > 2:881121/1‑100 (MQ=255)
gCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACgg > 2:564287/1‑100 (MQ=255)
cTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACggg < 2:2014400/100‑1 (MQ=255)
cTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACggg > 1:2066377/1‑100 (MQ=255)
cTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACggg < 2:1740665/100‑1 (MQ=255)
cTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACggg > 2:3177751/1‑100 (MQ=255)
tGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACgggg > 1:1430362/1‑100 (MQ=255)
tGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCACGTGAGTTATCAGAATTATTTTCAGAGCAATGTTACAACgggg < 1:3855552/100‑1 (MQ=255)
gTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGa > 1:3631990/1‑100 (MQ=255)
gTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGa > 1:2397672/1‑100 (MQ=255)
gTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGa > 1:3099314/1‑100 (MQ=255)
ttttAGACAGCGGGGTAACTCATTTTGACGAGATTTCTTCATTGCTCGCTTAGCAGGTGAGTGAGCAGAATTAGTTGCAGAGCAATGTTACAACGGGGaa < 2:3759567/100‑1 (MQ=255)
ttttAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaa > 1:2884544/1‑100 (MQ=255)
tttAACCAGCGTTTTAACTCTTTTTTACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaa > 2:1306922/1‑100 (MQ=255)
tttAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaa > 1:3918385/1‑100 (MQ=255)
tttAACCAGCGGGTTAACTCTTGTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaa < 2:2452453/100‑1 (MQ=255)
ttAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaaa < 2:1884968/100‑1 (MQ=255)
ttAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaaa < 2:233327/100‑1 (MQ=255)
ttAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaaa < 1:2538834/100‑1 (MQ=255)
ttAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaaa < 1:298822/100‑1 (MQ=255)
tAACCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaaaa > 2:3919016/1‑100 (MQ=255)
aaCCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGaaaaaa < 2:1333145/100‑1 (MQ=255)
aCCAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAAt > 1:3636799/1‑100 (MQ=255)
ccgctggTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATaa > 2:3578265/6‑100 (MQ=255)
cAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTCTCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATaa > 1:1631776/1‑100 (MQ=255)
cAGCGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATaa > 1:2006161/1‑100 (MQ=255)
cGGGTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCACGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAgg < 1:1410648/100‑1 (MQ=255)
ggTTAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCg > 1:3964376/1‑100 (MQ=255)
ttAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGAc > 2:1945951/1‑100 (MQ=255)
ttAACTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGAc < 1:2729263/100‑1 (MQ=255)
tAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGAcc < 1:2503593/100‑1 (MQ=255)
aaCTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGAccc > 1:3191937/1‑100 (MQ=255)
aCTCTTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCa > 1:2794373/1‑100 (MQ=255)
ctctTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCAt > 2:559338/1‑100 (MQ=255)
tctTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATa < 2:1095747/100‑1 (MQ=255)
ctTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAg > 1:2405675/1‑100 (MQ=255)
ctTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAg < 1:2583434/100‑1 (MQ=255)
ctTTTTGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAg > 1:2893082/1‑100 (MQ=255)
tttGACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCg < 1:1719538/100‑1 (MQ=255)
gACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACTGGGAAAAAATAAAGGCGACCCATAGTCGCAt < 1:3273493/100‑1 (MQ=255)
gACGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCAt < 1:1815518/100‑1 (MQ=255)
aCGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATg < 1:1801350/100‑1 (MQ=255)
aCGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATg < 2:2089080/100‑1 (MQ=255)
cGAGATTTCTTCATTGCACGCTTAGCTGGTGAGTTATCATAATTACTTGCAGAGCAATGTTACAACGGGGCAAAAATAAAGGCGACCCATAGTCGCATgg < 1:3815004/100‑1 (MQ=255)
cGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATgg < 2:1644789/100‑1 (MQ=255)
cGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATgg < 2:1791872/100‑1 (MQ=255)
cGAGATTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATgg < 1:3193766/100‑1 (MQ=255)
agaTTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGgtg < 1:192487/100‑1 (MQ=255)
gaTTTCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGgtgt > 2:3469567/1‑100 (MQ=255)
tttCTTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGCGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCg > 1:3841450/1‑100 (MQ=255)
|
CGCTCACAAAGCCCAGCAGACGAGAAATATTCAGCCAACGTTGGGAGATGACGCTTTGCTGTTTTAACCAGCGGGTTAACTCTTTTTGACGAGATTTATTCATTGCACGCTTAGCAGGTGAGTTATCAGAATTATTTGCAGAGCAATGTTACAACGGGGAAAAAATAAAGGCGACCCATAGTCGCATGGTGTCG > NC_000913/930860‑931053
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
