Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,113,790 |
T→G |
K180Q (AAA→CAA) |
wcaN ← |
putative regulatory subunit for GalU |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,113,790 | 0 | T | G | 99.0%
| 339.8
/ NA
| 99 | K180Q (AAA→CAA) | wcaN | putative regulatory subunit for GalU |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base G (48/50); minor base C (0/1); total (48/51) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACGGCCATGATGTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTTAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCATGGCA > NC_000913/2113693‑2113884
|
aCGGCCATGATGTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAg < 1:3132229/100‑1 (MQ=255)
ggCCATGATGTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTc < 1:3352704/100‑1 (MQ=255)
atgatgTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGa < 1:2435477/100‑1 (MQ=255)
atgatgTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGa > 1:2071992/1‑100 (MQ=255)
atgatgTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGa > 2:3162845/1‑100 (MQ=255)
tgatgTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTTTTTTTTTTTTACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGAt > 2:3440193/1‑100 (MQ=255)
tgatgTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGAt < 2:795311/100‑1 (MQ=255)
tgatgTCTGAGTCCAGCCTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTAACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGAt < 2:164384/100‑1 (MQ=255)
gatgTCTGAGTCCAGCGTGTGCGGGTGATCGGGTGTTTCGGTAAATTCAACAATGCGGCTGACTTTACCCGCACGGTCCAGCGGATCTTGAGTCTGGATg < 2:3896108/100‑1 (MQ=255)
tCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACgg < 1:2406117/100‑1 (MQ=255)
tCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACgg < 1:1388312/100‑1 (MQ=255)
tGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAg > 1:2048461/1‑100 (MQ=255)
tGAGTCCAGCGTCTGCGGCTGATCCGGCGTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAg < 1:228324/100‑1 (MQ=255)
gAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGt > 1:1767741/1‑100 (MQ=255)
gAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGt > 2:19807/1‑100 (MQ=255)
gTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTAt > 1:4049366/1‑100 (MQ=255)
ccAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTTTTc > 2:1167448/1‑100 (MQ=255)
cAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCa < 2:1796761/100‑1 (MQ=255)
cAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCa > 2:7173/1‑100 (MQ=255)
aGCGTCTGCGGCTGATCCGGTTTTTTTTTTATTTTCACAATGCGGCTGACTTTACCCTCACGCTCCTGCCGCTCTTGCGTCCGGATGCCGGTCTATTCag > 2:1671028/1‑100 (MQ=255)
aGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCag > 2:2421839/1‑100 (MQ=255)
cGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCagag < 1:122656/100‑1 (MQ=255)
gTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCagaga < 2:1624776/100‑1 (MQ=255)
gTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCagaga > 1:1122233/1‑100 (MQ=255)
gTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTCGAGTCTGGATGACGGAGTATTCagaga < 1:2566515/100‑1 (MQ=255)
gCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTc > 1:3999988/1‑100 (MQ=255)
cGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGGCa > 1:3265018/1‑100 (MQ=255)
ggCTGATCCGGTTTTTCGATAAATTCAACAATGGGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCAc > 1:271572/1‑100 (MQ=255)
ggCTGATCCGGTTTTTCGATAAATTAAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTGAGAGAGGTCAc > 2:3194248/1‑100 (MQ=255)
gCTGATCCGGTTTTTTTATAAATTTAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCAcc > 2:1032048/1‑100 (MQ=255)
cTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTCTTCAGAGCGGTCAccc > 2:2417006/1‑100 (MQ=255)
gATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCgg > 1:3860485/1‑100 (MQ=255)
aTCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGAAGGAGTATTCAGAGCGGTCACCCGGc > 1:3583930/1‑100 (MQ=255)
tCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCa < 2:2276633/100‑1 (MQ=255)
tCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCa > 1:3936177/1‑100 (MQ=255)
cGGTTTTTCGATAAATTCAACATTGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATa > 1:3413830/1‑100 (MQ=255)
cGGTTTCTCTATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATa < 2:2364149/100‑1 (MQ=255)
tttttCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGt > 2:3939918/1‑100 (MQ=255)
ttttCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCCCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGtt > 1:270433/1‑100 (MQ=255)
ttCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGtttt < 2:2384572/100‑1 (MQ=255)
tCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTg < 2:3893535/100‑1 (MQ=255)
cGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGc > 1:1774766/1‑100 (MQ=255)
gATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGcc < 2:1528832/100‑1 (MQ=255)
gATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGcc > 2:2128945/1‑100 (MQ=255)
tAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAg < 1:1609498/100‑1 (MQ=255)
tAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAg < 1:3425774/100‑1 (MQ=255)
tAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAg < 2:3209069/100‑1 (MQ=255)
aTTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCAc > 2:656815/1‑100 (MQ=255)
aTTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCAc > 1:1150197/1‑100 (MQ=255)
aTTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCAc > 1:1269236/1‑100 (MQ=255)
aTTCAACAATGCGGCTGACTTTACCCACACGGTCCAGCGGATCTTGAGACTGGATGACGGAGTATTCAGAGAGGTAACCCGGCATACGTTTTGCCAGCAc > 2:1296199/1‑100 (MQ=255)
ttCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCAcc < 2:2039758/100‑1 (MQ=255)
ttCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCAcc > 1:1810875/1‑100 (MQ=255)
ttCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCAcc < 1:177882/100‑1 (MQ=255)
tCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCt > 2:1945944/1‑100 (MQ=255)
caacaaTGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTg < 1:1773933/100‑1 (MQ=255)
acaaTGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTggn < 1:3244607/100‑2 (MQ=255)
caaTGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCt > 2:1294154/1‑100 (MQ=255)
aTGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGc < 1:3539429/100‑1 (MQ=255)
tGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCg > 2:443483/1‑100 (MQ=255)
tGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCg < 2:2488956/100‑1 (MQ=255)
tGCGGCTGACTTTACCCTCACGGTCCAGCGGCGCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCg < 1:695295/100‑1 (MQ=255)
gCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCgg > 1:1962966/1‑100 (MQ=255)
ggCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGcc > 1:534801/1‑100 (MQ=255)
ggCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGcc > 1:1977426/1‑100 (MQ=255)
ggCTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGcc < 1:3807327/100‑1 (MQ=255)
cTGACTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCg < 1:2631099/100‑1 (MQ=255)
cTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTc < 2:3742259/100‑1 (MQ=255)
cTTTACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTc < 2:2874300/100‑1 (MQ=255)
ttACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGt < 2:3467102/100‑1 (MQ=255)
tACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGtt < 1:846864/100‑1 (MQ=255)
tACCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGtt > 1:95518/1‑100 (MQ=255)
tACCCTCACGGTCCAGCGGCTCTTCAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCCCCATACGTTTTGCCAGCACCTGGCTGCTGCCCGTTTCGtt < 1:847109/100‑1 (MQ=255)
aCCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTg < 2:1099961/100‑1 (MQ=255)
aCCCTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTg < 2:1587085/100‑1 (MQ=255)
cccTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGa > 1:2034465/1‑100 (MQ=255)
cccTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGa > 2:2649308/1‑100 (MQ=255)
ccTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGaa < 1:1318166/100‑1 (MQ=255)
ccTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGaa < 2:1620828/100‑1 (MQ=255)
cTCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGaaa < 1:672475/100‑1 (MQ=255)
tCACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAAc < 1:1414359/100‑1 (MQ=255)
naCGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACg > 1:3245132/2‑100 (MQ=255)
cACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACg < 2:2229162/100‑1 (MQ=255)
cACGGTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACg < 1:578814/100‑1 (MQ=255)
ggTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGc < 2:3691721/100‑1 (MQ=255)
ggTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGc > 1:1184322/1‑100 (MQ=255)
ggTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGc < 1:545496/100‑1 (MQ=255)
ggTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGc > 1:239445/1‑100 (MQ=255)
ggTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGc > 2:2129094/1‑100 (MQ=255)
ggTCCAGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGc < 1:510235/100‑1 (MQ=255)
aGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCa > 2:481882/1‑100 (MQ=255)
aGCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCa > 1:3286396/1‑100 (MQ=255)
gCGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCAt < 1:2653791/100‑1 (MQ=255)
cGGCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCATg < 2:524255/100‑1 (MQ=255)
gCTCTTGAGTCTGGATGAGGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCTTTTCGTTGAAACGTGCAATCATGgc < 2:2848269/100‑1 (MQ=255)
gCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCATGgc > 2:3426144/1‑100 (MQ=255)
gCTCTTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCATGgc < 1:2311677/100‑1 (MQ=255)
ctctTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCATGgca < 1:1712299/100‑1 (MQ=255)
ctctTGAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCATGgca > 2:1881561/1‑100 (MQ=255)
|
ACGGCCATGATGTCTGAGTCCAGCGTCTGCGGCTGATCCGGTTTTTCGATAAATTCAACAATGCGGCTGACTTTACCCTCACGGTCCAGCGGCTCTTTAGTCTGGATGACGGAGTATTCAGAGAGGTCACCCGGCATACGTTTTGCCAGCACCTGGCTGCGGCCCGTTTCGTTGAAACGTGCAATCATGGCA > NC_000913/2113693‑2113884
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
