Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,373,622 |
A→C |
intergenic (‑84/+26) |
pmrD ← / ← menE |
inactive two‑component system connector protein/O‑succinylbenzoate‑CoA ligase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,373,622 | 0 | A | C | 98.5%
| 445.6
/ ‑1.8
| 130 | intergenic (‑84/+26) | pmrD/menE | inactive two‑component system connector protein/O‑succinylbenzoate‑CoA ligase |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base C (75/53); total (77/53) |
| Fisher's exact test for biased strand distribution p-value = 5.13e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.20e-01 |
Only 100 of 132 total aligned reads displayed.
CCAGCCATTCCATTGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGAAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCAGCTCC > NC_000913/2373526‑2373717
|
gcAGCCATTCCATTGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAAt < 2:2574198/99‑1 (MQ=255)
ccAGCCATTCCATTGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAAt > 2:74869/1‑100 (MQ=255)
ccAGCCATTCCATTGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGAAAt > 1:1332932/1‑100 (MQ=255)
cAGCCATTCCATTGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATg > 2:1547793/1‑100 (MQ=255)
aGCCATTCCATTGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATga < 1:3925586/100‑1 (MQ=255)
aGCCATTCCATTGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATga > 2:3293394/1‑100 (MQ=255)
ccattccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGCAATGGCAGCAATgaga < 2:3870388/100‑1 (MQ=255)
cattccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGaa > 1:556374/1‑100 (MQ=255)
cattccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGaa < 2:1128639/100‑1 (MQ=255)
attccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAg > 2:3496387/1‑100 (MQ=255)
attccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAg > 1:1530394/1‑100 (MQ=255)
attccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCCTTATCAACGGCAATGGAATGGCAGCAATGAGAAg < 2:3693576/100‑1 (MQ=255)
ttccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGt < 1:1560746/100‑1 (MQ=255)
ttccattGCATTATCCTGTTTACTACGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGt < 1:3797130/100‑1 (MQ=255)
tccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTg > 2:2095457/1‑100 (MQ=255)
ccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGa > 2:22840/1‑100 (MQ=255)
ccattGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGa > 1:1219977/1‑100 (MQ=255)
tGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACg > 1:3843476/1‑100 (MQ=255)
tGCATTATCCTGTTTGCTAAGAGGTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATTGCAGCAATGCGAAGTGAAACg < 2:3425067/100‑1 (MQ=255)
gCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACgg > 1:2827518/1‑100 (MQ=255)
ttATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAgg > 2:1647189/1‑100 (MQ=255)
aTCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGt > 1:1286098/1‑100 (MQ=255)
aTCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGt < 1:3759553/100‑1 (MQ=255)
aTCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGt > 1:882426/1‑100 (MQ=255)
aTCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGt < 1:3161755/100‑1 (MQ=255)
tCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGtt < 1:3111498/100‑1 (MQ=255)
ccTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTa < 2:1118464/100‑1 (MQ=255)
ccTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTa > 1:1692080/1‑100 (MQ=255)
cTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGACTGGCAGCAATGAGAAGTGAAACGGAGGGTTaa > 1:2417411/1‑100 (MQ=255)
tGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAat < 2:2598545/100‑1 (MQ=255)
gTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAatt > 2:2529120/1‑100 (MQ=255)
gTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAatt < 1:400429/100‑1 (MQ=255)
tGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAattatt > 1:363398/1‑100 (MQ=255)
tGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAattatt > 1:1334308/1‑100 (MQ=255)
cTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGc < 1:2900449/100‑1 (MQ=255)
cTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGc < 1:1464415/100‑1 (MQ=255)
tAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCt > 2:280704/1‑100 (MQ=255)
agagTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGa > 2:3108581/1‑100 (MQ=255)
gTTTTCACATCCATTTACCGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGt < 2:513400/100‑1 (MQ=255)
gTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGt > 2:2136850/1‑100 (MQ=255)
cttgtCACATCAATTCCCAGATTAACAGATAAACTCTTTAACAACGGCCATGGAATGTGAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGt < 2:3616957/96‑1 (MQ=255)
ttttCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGtt > 2:159293/1‑100 (MQ=255)
tttCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTg > 2:3927719/1‑100 (MQ=255)
ttCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGc < 1:2546372/100‑1 (MQ=255)
cacaTCAATTTACGGATTAACAGATAAGGTCTTTATCAACGGCAATGGAATGGCAGCAAAGAGAAGTGAAACGGAGGGTTAATTATTGATGACGTTGccc > 1:3594788/1‑98 (MQ=255)
cacaTCAATTTACGGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCAc > 1:2460271/1‑100 (MQ=255)
acaTCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCAcc < 2:1942703/100‑1 (MQ=255)
caTCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCAccc > 2:1843157/1‑100 (MQ=255)
caTCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCAccc > 2:1317447/1‑100 (MQ=255)
caTCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCAccc > 2:3259655/1‑100 (MQ=255)
aTCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCa > 2:1120816/1‑100 (MQ=255)
tCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCAc < 1:2728377/100‑1 (MQ=255)
tCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCAc < 1:2568450/100‑1 (MQ=255)
aTTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCActct < 1:511857/100‑1 (MQ=255)
ttACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCttt > 2:800373/1‑100 (MQ=255)
cAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAg > 1:663697/1‑100 (MQ=255)
aGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAgc > 2:2294735/1‑100 (MQ=255)
gATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAgcg > 1:1763829/1‑100 (MQ=255)
gATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAgcg < 1:144776/100‑1 (MQ=255)
gATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGAAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAgcg > 2:2142834/1‑100 (MQ=255)
ttAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGcc < 2:702998/100‑1 (MQ=255)
ttAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGcc < 1:3670274/100‑1 (MQ=255)
ctAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGcc < 2:946116/99‑1 (MQ=255)
tAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCt < 1:1168698/100‑1 (MQ=255)
aaCAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGccag > 1:966344/1‑98 (MQ=255)
aCAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAGCGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGa < 1:1987277/100‑1 (MQ=255)
cAGATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGAc < 2:2750428/100‑1 (MQ=255)
gATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGt > 1:1111306/1‑100 (MQ=255)
gATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGt > 2:905518/1‑100 (MQ=255)
gATAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGt < 1:4010680/100‑1 (MQ=255)
aTAAACTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTg > 2:935226/1‑100 (MQ=255)
aaaCTCGTGATTAACGGCAATAAAGTGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTTCTGACGTTGCAACAACTGTTTTAGCTCCTGACTTGaa > 2:39994/1‑100 (MQ=255)
aaCTCTTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGaaa > 2:338878/1‑100 (MQ=255)
ctctTAATAAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGACGGCTAATTATTGCCCCCGTTGCACTCACCCCTTTACCCCCACACGTGAAAtc > 2:453488/1‑99 (MQ=255)
tctTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAAttt > 1:854921/1‑100 (MQ=255)
tctTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAAttt > 2:2165775/1‑100 (MQ=255)
ctTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAAtttt < 1:1063481/100‑1 (MQ=255)
ctTTATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAAtttt > 1:3387984/1‑100 (MQ=255)
ttATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTaa < 2:1545687/100‑1 (MQ=255)
tATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAAt < 1:3520704/100‑1 (MQ=255)
tATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAAt > 1:316671/1‑100 (MQ=255)
tATCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTACTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAAt < 1:4010924/100‑1 (MQ=255)
aTCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATa < 2:1612901/100‑1 (MQ=255)
aTCAACGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATa > 2:1241812/1‑100 (MQ=255)
cAACGGCAATGGACTGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACCCTTTTAGCGCCTGCCGTGAAATTTTGATAcc > 2:2371202/1‑100 (MQ=255)
aaCGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATAccg > 2:2778892/1‑100 (MQ=255)
aaCGGCAATGGAACGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGTCGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATAccg < 1:2821499/100‑1 (MQ=255)
cGGCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATAccgcc > 2:1531759/1‑100 (MQ=255)
gCAATGGAATGGCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGt > 1:2157679/1‑100 (MQ=255)
atggaatggCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGtttt > 2:694094/1‑100 (MQ=255)
atggaatcgCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAAGACCGCCGttct < 2:3705810/100‑3 (MQ=255)
tggaatggCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGttttt > 1:2166659/1‑100 (MQ=255)
tggaatggCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGttttt > 1:1957219/1‑100 (MQ=255)
gaatggCAGCGATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCa < 1:2599764/100‑1 (MQ=255)
gaatggCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCa > 1:1898461/1‑100 (MQ=255)
gaatggCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCa < 2:2749044/100‑1 (MQ=255)
tggCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCAGCt < 1:921638/100‑1 (MQ=255)
ggCAGCAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCAGCTc > 1:2056325/1‑100 (MQ=255)
gcagcaATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCTGCTcc > 2:1229146/1‑100 (MQ=255)
gcagcaATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCAGCTcc < 1:2525971/100‑1 (MQ=255)
|
CCAGCCATTCCATTGCATTATCCTGTTTGCTAAGAGTTTTCACATCAATTTACAGATTAACAGATAAACTCTTTATCAACGGCAATGGAATGGCAGAAATGAGAAGTGAAACGGAGGGTTAATTATTGCTGACGTTGCACCCACTCTTTTAGCGCCTGACGTGAAATTTTAATACCGCCGTTTTTCAGCTCC > NC_000913/2373526‑2373717
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
