Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,403,148 |
A→C |
N371H (AAC→CAC) |
hflK → |
modulator for HflB protease specific for phage lambda cII repressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,403,148 | 0 | A | C | 99.4%
| 614.6
/ ‑4.2
| 175 | N371H (AAC→CAC) | hflK | modulator for HflB protease specific for phage lambda cII repressor |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base C (100/74); total (100/75) |
| Fisher's exact test for biased strand distribution p-value = 4.29e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.95e-01 |
Only 100 of 175 total aligned reads displayed.
CGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGG > NC_000913/4403052‑4403244
|
cGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACg > 1:392284/1‑100 (MQ=255)
gCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCTGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACgg < 2:828964/100‑1 (MQ=255)
gCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACgg > 2:2168740/1‑100 (MQ=255)
gCAAAGTACTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACTAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAATAGCGATCACgg < 2:3706083/100‑1 (MQ=255)
aaaGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTg < 1:2608849/100‑1 (MQ=255)
gTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCa < 1:1953961/100‑1 (MQ=255)
gCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGc > 1:4061030/1‑100 (MQ=255)
cTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGGGCGATCACGGTGCCAGCa > 2:3119476/1‑100 (MQ=255)
ggTTAACGATAAAGGTGGCAAACTGGTGGTTCAGCCGATAGCCCAAATGCTGAAAGGTGGTAACGCCCAGGCGTCGGAGTGCGGTCACGGTGCGAGCAAt > 2:1611508/1‑100 (MQ=255)
ttAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATct > 1:2964333/1‑100 (MQ=255)
tcaaCGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATct > 1:2224884/3‑100 (MQ=255)
tAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATctg > 1:3207859/1‑100 (MQ=255)
tAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATctg > 2:1086194/1‑100 (MQ=255)
tAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATctg > 2:1543749/1‑100 (MQ=255)
aaCGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATctgc < 1:2469815/100‑1 (MQ=255)
cGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATctgctg > 1:1616910/1‑100 (MQ=255)
cGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATctgctg > 1:924943/1‑100 (MQ=255)
cGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATctgctg > 2:1306632/1‑100 (MQ=255)
cGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATctgctc > 2:353814/1‑99 (MQ=255)
gATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCtgctgc < 2:3182542/100‑1 (MQ=255)
gATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGAGGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGCTCACGGTGCCAGCAATCtgctgc > 2:3289163/1‑100 (MQ=255)
ggagagTGGCAAACTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGACGAGCGATCACGGTGCCCGCAATCTGCTGCGt > 1:378650/6‑100 (MQ=255)
aaGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGCAGAGCGATCACGGTGCCCGCAATCTGCTGCGTCt > 2:2703259/1‑100 (MQ=255)
aaGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCt > 2:2986631/1‑100 (MQ=255)
aGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTg < 1:2086112/100‑1 (MQ=255)
aGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTg > 1:999574/1‑100 (MQ=255)
gTGGCAACCTGATGGGTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTgcc > 2:399814/1‑100 (MQ=255)
tGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTgccg < 1:2398811/100‑1 (MQ=255)
gCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGGCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTgccgcc < 2:3622663/100‑1 (MQ=255)
aaCCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAg < 1:3799917/100‑1 (MQ=255)
aCCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGc < 2:909006/100‑1 (MQ=255)
ccTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGcc < 2:16784/100‑1 (MQ=255)
ccTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGcc > 1:3992949/1‑100 (MQ=255)
ccTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGcc < 1:1528950/100‑1 (MQ=255)
gATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCctct > 2:2881614/1‑100 (MQ=255)
ggTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTtcc < 2:2291044/100‑1 (MQ=255)
gTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTtcct < 2:1282871/100‑1 (MQ=255)
ttCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTtcctc < 1:473961/100‑1 (MQ=255)
tCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTtcctcc > 1:2060399/1‑100 (MQ=255)
tCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTtcctcc < 1:288533/100‑1 (MQ=255)
cTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGTCAGCCTCTTCCTCca > 2:307407/1‑100 (MQ=255)
tGCCGTTGGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGTAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCcac < 1:3750909/100‑1 (MQ=255)
cGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAAc > 1:821909/1‑100 (MQ=255)
cGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAAc > 1:1026916/1‑100 (MQ=255)
cGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCACCAGCCTCTTCCTCCACAAc > 1:1401930/1‑100 (MQ=255)
tAGACCAGATGCGGAAAGGTGGTAACGCCCCGGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAg < 1:31758/100‑1 (MQ=255)
aGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGt > 2:855614/1‑100 (MQ=255)
gACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTg > 1:2694097/1‑100 (MQ=255)
gACCAGATGCAGAGAGGTGGTAACGCTACTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTAACGCCAGCCTCTTCCTCCACAACCAGTg > 2:1344052/1‑100 (MQ=255)
aCCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTgg > 2:3480872/1‑100 (MQ=255)
ccAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGa > 1:537042/1‑100 (MQ=255)
ccAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGa > 2:2690861/1‑100 (MQ=255)
ccAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGa > 2:1106597/1‑100 (MQ=255)
cAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGag > 1:962395/1‑100 (MQ=255)
cAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGag < 1:1749305/100‑1 (MQ=255)
cAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGag < 2:1424773/100‑1 (MQ=255)
cAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGag < 2:2146991/100‑1 (MQ=255)
agagGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGGAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagc < 2:482950/100‑1 (MQ=255)
aGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagc > 2:1303932/1‑100 (MQ=255)
aTGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaa > 2:2487471/1‑100 (MQ=255)
tGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaag > 2:2228921/1‑100 (MQ=255)
gCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaagc > 1:3281057/1‑100 (MQ=255)
gCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaagc > 1:3436885/1‑100 (MQ=255)
gCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaagc > 2:2609637/1‑100 (MQ=255)
gCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaagc > 1:1900393/1‑100 (MQ=255)
cTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaagca > 2:1856793/1‑100 (MQ=255)
cTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaagca < 2:57242/100‑1 (MQ=255)
cTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGagcaagca < 1:2750420/100‑1 (MQ=255)
tGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAgcaagcaa > 2:3221342/1‑100 (MQ=255)
gAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAac > 1:849685/1‑100 (MQ=255)
gAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAac < 1:1105743/100‑1 (MQ=255)
gAAACGTGGTAACGCCCCTTCGGCGATGAGCGATCACGGTGCCAGCAATCTTCTGCGTCTGCCGCCAGGCTCTTCCTCCACAACCAGTGGAGCAAGCAac < 2:385158/100‑1 (MQ=255)
aaGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAacac > 2:1952591/1‑100 (MQ=255)
aGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAacacn < 1:1426136/100‑2 (MQ=255)
aGGTGGTAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACAcg > 1:2061969/1‑100 (MQ=255)
ggtggtAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACAcgt < 1:312892/100‑1 (MQ=255)
gtggtAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCGGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACAcgtc < 2:3151474/100‑1 (MQ=255)
tggtAACGCCCCGGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACAcgtcg < 2:2268853/100‑1 (MQ=255)
ggtAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACAcgtcgt > 1:286816/1‑100 (MQ=255)
ggtAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACAcgtcgt > 1:1271851/1‑100 (MQ=255)
tAACGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTcc > 2:493431/1‑100 (MQ=255)
ngCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTccacc > 1:3260957/2‑100 (MQ=255)
cGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTccacc > 1:3498160/1‑100 (MQ=255)
cGCCCCTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTccacc > 2:342743/1‑100 (MQ=255)
ccccTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAg > 2:2205715/1‑100 (MQ=255)
ccTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTc > 2:935547/1‑100 (MQ=255)
ccTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTc < 1:3714847/100‑1 (MQ=255)
ccTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTc > 1:201936/1‑100 (MQ=255)
cTGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCa > 2:194787/1‑100 (MQ=255)
tGCGGCGAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAg > 2:618984/1‑100 (MQ=255)
gcggcgAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAgg < 2:2863128/100‑1 (MQ=255)
cggcgAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAggg < 1:909731/100‑1 (MQ=255)
cggcgAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAggg > 1:2529299/1‑100 (MQ=255)
gcgAAGAGCGCTCTCGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCTAGCAACACGTCGTCCACCAGTCAGGGCg < 1:1030385/100‑1 (MQ=255)
gcgAAGAGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCg < 1:2201188/100‑1 (MQ=255)
cgAAGGGCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGa < 2:1070559/100‑1 (MQ=255)
gCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCGCAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGAtattat > 1:393698/1‑100 (MQ=255)
gCGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGAtattat > 1:3003362/1‑100 (MQ=255)
cGATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATCATg < 1:3138283/100‑1 (MQ=255)
gATCACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATgg > 1:2108520/1‑100 (MQ=255)
|
CGCAAAGTGCTGGTTAACGATAAAGGTGGCAACCTGATGGTTCTGCCGTTAGACCAGATGCTGAAAGGTGGTAACGCCCCTGCGGCGAAGAGCGATAACGGTGCCAGCAATCTGCTGCGTCTGCCGCCAGCCTCTTCCTCCACAACCAGTGGAGCAAGCAACACGTCGTCCACCAGTCAGGGCGATATTATGG > NC_000913/4403052‑4403244
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
