Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F418 I1 R1
|
19 |
54.4 |
1474142 |
94.2% |
1388641 |
177.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,132,227 |
C→A |
A798E (GCG→GAG) |
metL → |
Bifunctional aspartokinase/homoserine dehydrogenase 2 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,132,227 | 0 | C | A | 100.0%
| 241.2
/ NA
| 62 | A798E (GCG→GAG) | metL | Bifunctional aspartokinase/homoserine dehydrogenase 2 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (28/34); total (28/34) |
GATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGCGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGA > NC_000913/4131997‑4132440
|
gATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGt > 1:642806/1‑239 (MQ=255)
atgcggCAAGGGCTGGAACCGGCCCGCGAAAGGGGGCTGGTGCTGCGCTACGGGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCCCTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGt < 2:15445/233‑1 (MQ=255)
ggTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCgg > 2:264895/1‑239 (MQ=255)
gCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGat < 2:690453/238‑1 (MQ=255)
tGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCaa < 1:264895/235‑1 (MQ=255)
gtcccGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGc < 1:281931/235‑1 (MQ=255)
cccGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGc > 1:328676/1‑235 (MQ=255)
aaTGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCgg < 1:199167/223‑1 (MQ=255)
cgcTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCaa > 2:145565/1‑203 (MQ=255)
cgcTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCaa < 1:145565/203‑1 (MQ=255)
ccTACGGTGCGCTTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGTTCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTtaa < 2:642806/237‑1 (MQ=255)
tttctgggCGCGTTTCGATGCAAACGTTAAGGCGCGTTTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTtaata < 2:647098/233‑1 (MQ=255)
ggCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTGATAATGcc < 2:77028/238‑1 (MQ=255)
ggCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGcc < 2:328676/238‑1 (MQ=255)
cAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGtttt < 1:161012/238‑1 (MQ=255)
aaCGGTAAAGCGCGGTTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCg < 1:649331/239‑1 (MQ=255)
ggTAAAGCGAGGGAAGGCGTGGAAGCGGTGGTGGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAGGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGGGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTc < 2:365009/235‑1 (MQ=255)
gtgtAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTtaata > 1:493443/1‑204 (MQ=255)
gtgtAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTtaata < 2:493443/204‑1 (MQ=255)
gtgtAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGtt > 1:484962/1‑237 (MQ=255)
tgtAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTACTGTTTTCGGGGTTTGGGGTTCt > 2:659968/1‑239 (MQ=255)
gTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGaa < 1:659968/238‑1 (MQ=255)
gAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAATCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGCCGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGGAATTTAATAAAGCCCGGTACTCATGCTTTCGGGATTATGGTTTCTAATGAAatat > 2:216771/1‑239 (MQ=255)
gAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATGACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGGTTCTAATGAAatat > 2:564367/1‑239 (MQ=255)
aaGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTc > 2:413076/1‑205 (MQ=255)
aaGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTc < 1:413076/205‑1 (MQ=255)
tGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGCTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGaa < 1:128188/238‑1 (MQ=255)
atcCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGaa < 2:138651/226‑1 (MQ=255)
atcCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGaa > 1:138651/1‑226 (MQ=255)
ggCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGcc < 1:292236/172‑1 (MQ=255)
ggCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGcc > 2:292236/1‑172 (MQ=255)
ggCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGa > 1:83256/1‑230 (MQ=255)
ggCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCgg > 1:598094/1‑239 (MQ=255)
ggCATCACTGCTGCCGTGCGATAACGTCTTGGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGa < 2:83256/230‑1 (MQ=255)
ctgcCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGtt > 2:613896/1‑239 (MQ=255)
tgcCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAAt > 1:132597/1‑209 (MQ=255)
tgcCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAAt < 2:132597/209‑1 (MQ=255)
gcCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAAtt > 2:514419/1‑150 (MQ=255)
gcCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAAtt < 1:514419/150‑1 (MQ=255)
gTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCaa < 2:153572/114‑1 (MQ=255)
gTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCaa > 1:153572/1‑114 (MQ=255)
tGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGaa > 2:279598/1‑193 (MQ=255)
tGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGaa < 1:279598/193‑1 (MQ=255)
tGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCaagaa > 1:87743/1‑239 (MQ=255)
ccATCGGAAGCCTGTGGTAGCGCGATACCCCTATGGTGATCCGCGGACCGGGCGCTGGGCGGCGCGTCACCGCAGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGc < 2:415420/239‑1 (MQ=255)
tCGAAAGCCGTGGGTATCGCGATAACCTTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAAt < 2:598094/239‑1 (MQ=255)
cGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGc > 2:47593/1‑98 (MQ=255)
cGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGc < 1:47593/98‑1 (MQ=255)
ccGCTGGTATCGCGATACCCCTCTGTGGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTa < 2:484962/237‑1 (MQ=255)
cTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGaa > 2:380865/1‑164 (MQ=255)
cTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGaa < 1:380865/164‑1 (MQ=255)
ctGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAg > 2:563518/1‑93 (MQ=255)
ctGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAg < 1:563518/93‑1 (MQ=255)
tGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTcc > 1:236286/1‑239 (MQ=255)
tCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTtaata < 2:214187/96‑1 (MQ=255)
tCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTtaata > 1:214187/1‑96 (MQ=255)
cgGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGtttgcttt > 2:59828/1‑239 (MQ=255)
aCCTGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCa > 2:726738/1‑239 (MQ=255)
tGGCGCTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATAc < 2:87743/239‑1 (MQ=255)
cTGGGCGCGACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGa < 1:613896/238‑1 (MQ=255)
gACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTAc > 1:340682/1‑186 (MQ=255)
gACGTCACCGCCGGGGAGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTAc < 2:340682/186‑1 (MQ=255)
|
GATGGTGCAACGGCTGGAAGCGGCCCGCGAAATGGGGCTGGTGCTGCGCTACGTGGCGCGTTTCGATGCCAACGGTAAAGCGCGTGTAGGCGTGGAAGCGGTGCGTGAAGATCATCCGTTGGCATCACTGCTGCCGTGCGATAACGTCTTTGCCATCGAAAGCCGCTGGTATCGCGATAACCCTCTGGTGATCCGCGGACCTGGCGCTGGGCGCGACGTCACCGCCGGGGCGATTCAGTCGGATATCAACCGGCTGGCACAGTTGTTGTAATTTCAGAAATTTAATAATGCCCGGTACTCATGTTTTCGGGTTTATGGTTTCTAATGAAATATATTGAATTATCATAGGATTAGGCCGGATTAAGCGTTTACGACGAATCCGGCAAGAAGCAATAAGTACATGGTTAGTTTATATTTGCAGTCCGGTTTGCTTTGCATACCGGA > NC_000913/4131997‑4132440
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
