Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F9 I0 R1 89 94.4 2603848 74.4% 1937262 227.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,849,513 T→G 23.8% T113P (ACC→CCC)  hycB ← hydrogenase 3, Fe‑S subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,849,5130TG23.8% 151.0 / 13.0 83T113P (ACC→CCC) hycBhydrogenase 3, Fe‑S subunit
Reads supporting (aligned to +/- strand):  ref base T (8/51);  new base G (22/2);  total (30/53)
Fisher's exact test for biased strand distribution p-value = 1.78e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CCAAAGTCCGTGTTAAAGGTCAGCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGATTCTTTTTCATTCAGCATCACTCTCAGGCGCGGCAT  >  NC_000913/2849284‑2849750
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                
ccAAAGTCCGTGTTAAAGGTCAGCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATTT‑GC‑TGACACGCCCCGGAGCAGCCGGTGCC‑GGCGGCG‑CCTTCGGGGGTTTggggat                                                                                                                                                                                                                                         >  1:722288/1‑235 (MQ=255)
ccAAAGTCCGTGTTAAAGGTCAGCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGGTCC‑GGTGGGG‑GTTTCCGGGGATTGGCGtt                                                                                                                                                                                                                                         >  1:172469/1‑239 (MQ=255)
 cAAAGTCCGTGTTAAAGGTCAGCTCCCGGTTACGTTTGCTGACGCGGGCGATATCGGTGTTAAC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGtt                                                                                                                                                                                                                                         <  1:596611/238‑1 (MQ=255)
  aaggTCCGTGTTAAAAGGCAGCTCACGCGTATGTTTGGGGGCGGGGGCTATGCCGGTGTTAGC‑‑CTCCATATGCAGGGCGTTAGGCGGGCACAGTCGCACGCAGGCCGGACCTTGTTCATCAAAGCGACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTg                                                                                                                                                                                                                                       <  2:392703/236‑1 (MQ=255)
  aaaGGCCGTGTTAAAGGTCAGCTCCCGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTg                                                                                                                                                                                                                                       <  1:657999/239‑1 (MQ=255)
           gtTAAAGGTCAGCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGCCACGCGCCGGAGCAGGCGGTTCC‑GGTGGCG‑CTTTCGGGGGATTTGCGTTTTCCGGGata                                                                                                                                                                                                                               >  1:1258846/1‑238 (MQ=255)
                  gTCAGCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATCCACACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGGGGCG‑CTTTCGGGGGATTGGCGGTTTCCGGGAAATCCatg                                                                                                                                                                                                                         >  1:281747/1‑237 (MQ=255)
                    cAGCTCCCGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGAc                                                                                                                                                                                                                     <  1:864752/239‑1 (MQ=255)
                     aGCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑GTTTCGGGGTATTGGCGCTTGCCGGGAAATCCAGCGGGCg                                                                                                                                                                                                                    >  1:247728/1‑239 (MQ=255)
                     aGCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGGGGCG‑CTTTCGGGGGATTGGCGGTTGCCGGGAAATCCAGCGGGCg                                                                                                                                                                                                                    >  1:646865/1‑239 (MQ=255)
                      gCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTCCAAAGGTCACATTTGACGGCGATCG‑CGCGAATCCCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGGGAC‑GGTGGCG‑CTTTCGCGGTATTGGCGCTTGCCGGAGGATcccacggggg                                                                                                                                                                                                                    >  1:511248/1‑230 (MQ=255)
                                 cGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGGGGCG‑CTTTCGGGGGATTGGCGGTTGCCGGGAAATCCACCGGGAGGCTGCCGGaaaa                                                                                                                                                                                                        >  1:82232/1‑239 (MQ=255)
                                      gCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGGATTGGGGGTTTCCGGAATATCCCGCGGACGGCTGCCGGAAAATTCaa                                                                                                                                                                                                   >  1:776053/1‑239 (MQ=255)
                                      gCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGGATTGGCGGTTGCCGGAATATCCAGCGGACGGCTGCCGGGAAATTCaa                                                                                                                                                                                                   >  1:1090433/1‑239 (MQ=255)
                                      gCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGAAACGCGCCGGAGCAGGCGGGGCCGGGGGGCG‑C‑TTCGGGGGATTGGCGTTTGCCGGGATTACCAGCGGACGGCTGCCGGAAAATTCaa                                                                                                                                                                                                   >  1:643458/1‑239 (MQ=255)
                                                        ggTTTTAGC‑‑CCCCAGTTGGCGGGTTTTAGGCCGGCACCACCGCACCGATGCCGGAACTTAGTCAGCAAAGCCACAAAGGGCCCATTTTACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAgg                                                                                                                                                                                <  2:716795/239‑1 (MQ=255)
                                                        ggTGTAATC‑‑CCCCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGGTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAgg                                                                                                                                                                                <  1:658038/239‑1 (MQ=255)
                                                         gtgtTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑CGTGGCG‑CCTTCCGGGGATTGGCGTTTGGCGGAATATCCCGCGGACGGCTGCCGGGAAATTCAAATTCGCCA‑AAAgggcgggc                                                                                                                                                                               >  1:439536/1‑239 (MQ=255)
                                                           gtTAAC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCg                                                                                                                                                                              <  1:260736/238‑1 (MQ=255)
                                                              aTC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGGATTGGCGTTTGCCGGGAAATCCCCGGGACGGCTGCCGGCAAATTCAATTGGGCCA‑AACGGGCAGGCGAta                                                                                                                                                                           >  1:638570/1‑237 (MQ=255)
                                                              aTC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CCTTCCGGGGATTGGCGTTTTCCGGAATATCCCGCGGACGGCTGCCGGAAAATTCAATTTCGCCA‑AACGGGCAGGccgtc                                                                                                                                                                           >  1:283430/1‑234 (MQ=255)
                                                              aTC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGGGCC‑GGTGGCG‑CTTTCGGGGGATTTGCGTTTGCCGGGATATCCAGCGGACGGCTCCCGGAAAATTCAATTTCCCCA‑CAAGGGGACGCGATg                                                                                                                                                                           >  1:28231/1‑238 (MQ=255)
                                                              aTC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGGGCC‑CGGGGCG‑CTTTTGGGGGTTTGGGGTTTTCCGGCATACCAAGCGGGCGGCCGGTCGGAAATTTAAATGGGCCACAACGGGCAGGCGagg                                                                                                                                                                           >  2:750112/1‑237 (MQ=255)
                                                                      caGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGGGCC‑GGTGGCC‑CTTTCGGGGGATTTGCGCTTGCCGGGAAATTCACCGGGCGGCTGCCGGGAAATTCAATTTGCCCA‑AACCGGCCGGCGGATCCGcaca                                                                                                                                                                    >  1:884727/1‑239 (MQ=255)
                                                                      caGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGAGGATCG‑CGCGACTACCTGGCACCCATTCACGCAATGT‑GC‑TGACACGCGCCGGAGACGGCGATGCC‑CGTGTCGACTTCTGGGGTA‑TGGGGGTTGCCGGCGTATCACCCGGCCGCGTGCCGGGAAAATCAACTGCTCCA‑AAACGGCAGGGGATGcgccac                                                                                                                                                                     >  2:813776/1‑233 (MQ=255)
                                                                           gCAGGGTTTTAGTCGGGCCCATCTCCCGGCAGGCCGGACCGTGTTCAACAAAGCTACAAAGGTCAAATTTGACGGCGACCG‑GGCGAATACCTGGCCCCGAGTCAAGCAATGT‑GT‑TGACA‑‑CGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGc                                                                                                                                                              <  2:931422/238‑1 (MQ=255)
                                                                           gCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGGG‑CTTTCGGGGGATTGGGGTTTGCCGGAATATCCACCGGAAGGCTGCCGGAAAATTTCATTTGGCCA‑AACGGGCGCGGGAAGCCGCCCAGCtt                                                                                                                                                                >  1:769224/1‑238 (MQ=255)
                                                                              gggCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGGATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTTCGCCA‑AACCGGCAGGCCGTGCCGCACAGCTTGCa                                                                                                                                                             >  1:1135508/1‑238 (MQ=255)
                                                                              gggCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGGGGCG‑CTTTCGGGGGATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGGAAATTCAATTGCGCCC‑AACCGGCAGGCGATTCCCCCCAGCTTCCa                                                                                                                                                             >  1:138922/1‑238 (MQ=255)
                                                                                gCTTTAGGCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGc                                                                                                                                                           <  1:216649/238‑1 (MQ=255)
                                                                                    tAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGGGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGGAAATTCAATTGCGCCC‑AACGGGCAGGCGGTGCCCCCCAGCTTGCAGCTTAc                                                                                                                                                       >  1:373093/1‑238 (MQ=255)
                                                                                        cGGGCCCATCCGCACCGAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGcac                                                                                                                                                   <  1:684922/238‑1 (MQ=255)
                                                                                            cacaTCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGc                                                                                                                                               <  1:939215/238‑1 (MQ=255)
                                                                                            cacaTCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGc                                                                                                                                               <  1:381935/238‑1 (MQ=255)
                                                                                              caTCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATGCCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCtt                                                                                                                                             <  1:638737/238‑1 (MQ=255)
                                                                                                           gCCGGACCTTGTTCATCAAAGCTACAAAGGTCAGATTTGACGGCGATCG‑CGCGAATTCCTGGCCCCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATAGCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑a                                                                                                                               <  1:910130/238‑1 (MQ=255)
                                                                                                            ccGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑a                                                                                                                               <  1:1196461/237‑1 (MQ=255)
                                                                                                             cGGCCCTTTTTCATCAAAGCTCAAAAGTGCACATTTGAC‑GCGCACGCCCCCAAGCCCTGGCACCCAGTCAAGCAAGGG‑GC‑TACCACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTGTCGTGGTATTGGTGTTTGCCGGAATATCCAGCGGACGGCTTACGGAAAATTCAATTGCGCCA‑AACGGTCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGATTTCATTCAACTGC‑ACgg                                                                                                                            <  2:776053/239‑1 (MQ=255)
                                                                                                                       tccacaAAGCTCCAAAGGTCCCTTTTGACGGCGATCG‑CCCGAATCCCTGGCACCACGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CGTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGAc                                                                                                                  <  2:638570/235‑1 (MQ=255)
                                                                                                                        catcaAAGCTACAAAGGTCAAATTTTGCGGGGATCG‑GCGGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGAcg                                                                                                                 <  1:877634/239‑1 (MQ=255)
                                                                                                                         atacaaGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGAcgc                                                                                                                <  1:245268/235‑1 (MQ=255)
                                                                                                                              aGCTACAAAGGTCAAATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGG‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTg                                                                                                           <  1:935992/239‑1 (MQ=255)
                                                                                                                                 gtcAACGGTCACATTTGCCGGCGATCG‑CGCGAATACCGGGCACCCAGGCAAGCAATGG‑GG‑CGCCACGGGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGa                                                                                                          <  2:1135508/235‑1 (MQ=255)
                                                                                                                                         tcccaTTTGGCGGGGATCG‑GGCGAATACCTGGCCCCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTaa                                                                                                 <  1:1219420/235‑1 (MQ=255)
                                                                                                                                         tCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTaa                                                                                                 <  1:1189138/238‑1 (MQ=255)
                                                                                                                                          ccaaTTTGCCGGCGAGCG‑CGCCAATCCCGGGGCCCCAGTCAAGCAATGG‑GC‑GTACACGCGCCGGAGCAGGCGGGGCC‑GGTGGCG‑CTTGCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAAcc                                                                                               <  2:643458/236‑1 (MQ=255)
                                                                                                                                           acaTTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGGATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACCGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAAACg                                                                                              >  1:396922/1‑239 (MQ=255)
                                                                                                                                               ttGGCGGCCATCG‑CGGGAAATCCGGGCCCCCAGTCAAGCAATGT‑GC‑TGACCCGCGGCGGAGCGGGCGGTGCC‑GGTGCGG‑CTTGCGGGGTATTTGGTTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCa                                                                                          <  2:138922/239‑1 (MQ=255)
                                                                                                                                               ttGACGGACATCG‑AGCGAATCCCGGGCACCCGGGACAGCAATGT‑GC‑TGACACGCGGCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCa                                                                                          <  1:534215/239‑1 (MQ=255)
                                                                                                                                                  aCGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGAGCC‑GGTGGCG‑CTTTCGGGGTATTAGCGTTTGCCGGCATATCCAGCGCGCGGCTGCCGGAAAATTCACTTTGCCGC‑AACGGGCAGGCCATGCCACACACGTTGCACCTTACCCCCACGCTCTGATCAAAACTC‑ACGGGCCCATAGCCGCGGGGGATGGCGGTAAACTGGccaa                                                                                        >  2:354116/1‑235 (MQ=255)
                                                                                                                                                    ggCGATCG‑CGCGAATTCCTGGCACCCAGGCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGacc                                                                                      <  1:760137/238‑1 (MQ=255)
                                                                                                                                                    ggCGATCG‑CGCGAATCCCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGacc                                                                                      <  1:1131712/238‑1 (MQ=255)
                                                                                                                                                         tCG‑CGCGAATTCCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACcgcg                                                                                <  1:709347/239‑1 (MQ=255)
                                                                                                                                                         gcg‑cgcgAGTCCCCGGCACCCAGTCAAGCACTGG‑GC‑TGCCACCGCCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTGCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAAGTCAATTGCGACA‑AACGGGCAGGCGATGCCGCCCAGCTTGCAGCTTACGCACAGGCTTTCATGCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACcgcg                                                                                <  2:1249051/238‑1 (MQ=255)
                                                                                                                                                          ggtcccgAATATCGGCCACCCAGTCAAGCATTGT‑GG‑TGACACGGGCCTGAGCAGGCGGTGGC‑GGTGGCG‑CTTTCGGGGGATTGGCGTGTGCCGGAATATCCAGCGGACGGCTGCCGGAAACTTCAATTGCGCCA‑AACGTGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTATCATTCAACTGC‑ACGGTCCCATCGACGCGGGTGATGGCGTTAACCGGGCCGACCACcgcg                                                                                <  2:1211072/234‑1 (MQ=255)
                                                                                                                                                          gccgcgcaaTCCCCGGCCCCCAGTCCAGCAATGTGGC‑TAACGGGC‑CCGGAGCAGGCGGTGCG‑CGTGGCG‑CTGTCGGGGTATTGGCGTTTGCCGGAAGAACCAGGGGACGGCGGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACcgcg                                                                                <  2:646865/232‑1 (MQ=255)
                                                                                                                                                          cg‑cgcgAATCCCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACcgcg                                                                                <  1:898247/238‑1 (MQ=255)
                                                                                                                                                           g‑cgcgAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACcgcg                                                                                <  1:449473/237‑1 (MQ=255)
                                                                                                                                                            gcccgAATGCCGGGCCCCCAGGCAAGGAATGT‑TG‑TGGCCCGGGCCGGAGCAGGCGGGGCC‑GGTGGCG‑GTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCa                                                                              <  2:884727/236‑1 (MQ=255)
                                                                                                                                                             ccgcaaTTCCTGGCCCCCTGTGAAGCAAGGT‑GC‑GGGCCCGCGCCGGAGCAGGGGGTGCC‑GGGGGCG‑CTTTGGGGGTATTGGCGGTTGGCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAg                                                                             <  2:439536/235‑1 (MQ=255)
                                                                                                                                                              gcgAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAg                                                                             <  1:235526/238‑1 (MQ=255)
                                                                                                                                                                 aattcctttcccccAGTCAAGCAATCT‑GC‑TGACCCGCGCGGGGGCAGGCGTGGGC‑GGTGGCG‑TTTTCGGGGTATTGGCGGTTGCCGGAATACCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTg                                                                         <  2:769224/228‑1 (MQ=255)
                                                                                                                                                                  attccTGGCCCCCAGTCAAAGAATTT‑GC‑CGACCCGGGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTg                                                                         <  1:1245488/235‑1 (MQ=255)
                                                                                                                                                                  atcccTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTg                                                                         <  1:664307/235‑1 (MQ=255)
                                                                                                                                                                  aTACCGGGCACCCAGGCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTg                                                                         <  1:899034/238‑1 (MQ=255)
                                                                                                                                                                    cccTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCAt                                                                      <  1:1104921/238‑1 (MQ=255)
                                                                                                                                                                    aCCTCGCCCCCAGGCAAGCAATGT‑GC‑TGACCCGGGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCAt                                                                      <  1:327188/239‑1 (MQ=255)
                                                                                                                                                                        ggCACCCAGGCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTc                                                                  <  1:1141749/239‑1 (MQ=255)
                                                                                                                                                                             ccAGTCAAGCCATGT‑GCGTGAC‑CGGGCCGGACGCGGGGGGGCC‑GGTGGCG‑CTTGCGGGGTATTGGGGTTTGCCGGAATATCCAGGGGACGGCTGCCGGAAAAGTCAATTGCGCCA‑AACTGGCAGGCGATGCCGCACAGCGTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAgt                                                             <  2:82232/239‑1 (MQ=255)
                                                                                                                                                                             ccAGTCAAGCAGTGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAgt                                                             <  1:354116/239‑1 (MQ=255)
                                                                                                                                                                               aGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGGATTGGCGTTTGCCGGAATATCCCGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCCGGCAGACCACCCCGCAGGGGGCATCTTcccaaggg                                                           >  1:64511/1‑235 (MQ=255)
                                                                                                                                                                                           t‑gC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATTGCGTTAACCGGGCAGACCACCGCCCAGGGGGCATCTTCACCGAGGTGCCAGAGCTgc                                               >  1:10578/1‑239 (MQ=255)
                                                                                                                                                                                           t‑gC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTg                                                                         <  1:830771/213‑1 (MQ=255)
                                                                                                                                                                                           t‑gC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGGATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCCTTCCACTGC‑ACGGCCCCATCGACCCGGGGGATGGc                                                                                                      >  1:43305/1‑184 (MQ=255)
                                                                                                                                                                                                     cgggcCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGa                                      <  1:445869/236‑1 (MQ=255)
                                                                                                                                                                                                        gcCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTg                                                                         <  1:339893/202‑1 (MQ=255)
                                                                                                                                                                                                                 ggCGGGGGC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTGGCCGGAATATCCAGCGGACGGCTGCCGGAAAATGCAATTGCGCCA‑AACGGGCAGGCGACGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGATTCTTTttcatt                          <  1:778037/239‑1 (MQ=255)
                                                                                                                                                                                                                  gaggggggctgTGGGG‑CTTTGGGGGGTTTGGCGGTTGCCGGAAAAGCCCGAGGCGCGCTGCCGGAAAATTCAATGGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCGTACGCCCAGGCGTTCATTCAACTGC‑ACGGCCCCATCGGCGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGATTCTTTttcatt                          <  2:752797/229‑1 (MQ=255)
                                                                                                                                                                                                                  gCGGTGCC‑GGGGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGGCGGCTGCCGGGAAATTCAATTTCCCCA‑AACGGGCAGGCGATGGCCCACACCTTGCGCCTTCCACACACGGTTTCCTTTAACCTG‑ACGGCCCCCTCCGCACGGGTGCGTGCGCGACACGGGGAGACCACCCACCCCGGCGGCTCTTCACCATGGGGGCAGAGCGGCGGGCGCCGGTTCttttttacc                          >  2:12830/1‑235 (MQ=255)
                                                                                                                                                                                                                   cGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGATTCTTTttcatt                          <  1:750112/237‑1 (MQ=255)
                                                                                                                                                                                                                       gCC‑GGTGGCG‑CTTTCGGGGGATTGGCGTTTGCCGGAATATCCAGCGGACCGCGTCCGGAAAATTCAATTGCTCCA‑AACAGGCAGGCGCTTCCGCCCAACTCTCCGCTTACGCACAGGCTTTCATTGAACCGCAACGGACCCTTCCGC‑CGGGTGAATGCGTTAAACCGGCAGACCCCCGGCCCGTGGGCACTGTTACCGAGGTGACAGAGACGC‑GGCGCAGGGTCCTTttccttctgat                     >  2:1217947/1‑234 (MQ=255)
                                                                                                                                                                                                                             tGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGGGCATCTTCACAGGGGTGACAGAGCTGC‑GGCGCAGATTCTTTTTCATTCAGCATCAct                >  1:1139801/1‑238 (MQ=255)
                                                                                                                                                                                                                                       cGGGGTATTGGCGTTTGCCTGAATACCCAGCGGACGGCTGCCGGAAAAGTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGATTCTTTTTCATTCAGCATCACTCTCAGGcgcg      <  1:617348/239‑1 (MQ=255)
                                                                                                                                                                                                                                            tATTGGCGTTTGCCGGAATCTCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGATTCTTTTTCATTCAGCATCACTCTCAGGCGCGGCat  <  1:1285971/238‑1 (MQ=255)
                                                                                                                                                                                                                                            tATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGATTCTTTTTCATTCAGCATCACTCTCAGGCGCGGCat  <  1:717727/238‑1 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                
CCAAAGTCCGTGTTAAAGGTCAGCTCACGCTTACGTTTGCTGACGCGGGCGATATCGGTGTTATC‑‑CACCAGATGCAGGGCTTTAGTCGGGCACATCCGCACGCAGGCCGGACCTTGTTCATCAAAGCTACAAAGGTCACATTTGACGGCGATCG‑CGCGAATACCTGGCACCCAGTCAAGCAATGT‑GC‑TGACACGCGCCGGAGCAGGCGGTGCC‑GGTGGCG‑CTTTCGGGGTATTGGCGTTTGCCGGAATATCCAGCGGACGGCTGCCGGAAAATTCAATTGCGCCA‑AACGGGCAGGCGATGCCGCACAGCTTGCAGCTTACGCACAGGCTTTCATTCAACTGC‑ACGGCCCCATCGACGCGGGTGATGGCGTTAACCGGGCAGACCACCGCGCAGGGTGCATCTTCACAGTGGTGACAGAGCTGC‑GGCGCAGATTCTTTTTCATTCAGCATCACTCTCAGGCGCGGCAT  >  NC_000913/2849284‑2849750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A