Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F9 I0 R1
|
89 |
94.4 |
2603848 |
74.4% |
1937262 |
227.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
3,289,078 |
C→A |
16.0% |
Q89K (CAG→AAG) |
yraJ → |
putative outer membrane protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,289,078 | 0 | C | A | 16.0%
| 251.5
/ 7.1
| 108 | Q89K (CAG→AAG) | yraJ | putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (65/24); new base A (2/17); total (67/41) |
| Fisher's exact test for biased strand distribution p-value = 5.29e-07 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 114 total aligned reads displayed.
AACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGCAA > NC_000913/3288842‑3289315
|
accGCTCACCTAAGCAGTTGGCGCTCATCATCAACCGTTGTTTGCCGATGGAGCTCACTGGCAGCGGCATCCTTTGCACTACCGCTAACGCCGACGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑ACGGTATGCAAACA‑CCCGATCTGCCGCGTTTTTACAAAAAATATGCACAAATCACAGGAAC‑CTATCA‑GTTTTATATTTGTCTGGAACAAAAAAAG‑GATA‑cac‑aa > 2:373191/3‑238 (MQ=255)
aaCGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑Ag > 1:292070/1‑239 (MQ=255)
cGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGaa < 1:146291/239‑1 (MQ=255)
cacaCCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGCTATCTGGCTGATTAAAAAGAAG‑GTTT‑AAC‑AGaaaa > 1:120802/1‑239 (MQ=255)
aCAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTGTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATACCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AAAAAAA‑AA‑TTAAAt > 2:128899/1‑239 (MQ=255)
ttGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTTGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAACCA‑ACCCATCTGTAACGTTTTTCAAAACAATATGCACAACTCACAGAAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGCAAAA‑AA‑TTACAtttc > 1:277847/1‑237 (MQ=255)
ttGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑a > 1:944524/1‑238 (MQ=255)
ttGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAAAAG‑GTTT‑TAC‑AGAAAAA‑AA‑TAAAATTT‑a > 2:1293079/1‑238 (MQ=255)
catcatcaAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAAt > 1:885363/1‑238 (MQ=255)
atcatcaAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGACCTGTCGCGTTTTTCAAAAAAATATACACAACAACCAGCAAC‑TTATCA‑GGTTGATATCTGCCTGCATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTAAATTT‑ACCCCCaacac > 1:564354/1‑236 (MQ=255)
caAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTCTTTCAAAAAAATATGAACAACTACCAGAAAC‑TTATCA‑GGTTGATAACTGGCTGAATAAAAAAAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TAAAATTT‑ACCGCCAATCCaaaac > 2:286376/1‑235 (MQ=255)
tgttTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACAGCCAATCACGACCAACttat > 1:833389/1‑237 (MQ=255)
cgtgggTGCCCACTGGCAGCGGCATGCTTGGCACTACCGCTAACGCAGAAGGATATTATTTCGACCCCATTATGCTGGAAACCAAAAAAA‑GTGGTATGAAAACA‑ACCGATCTGTCGCTTTTTTCAAAAAAATATGCAAAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCca < 1:991030/235‑1 (MQ=255)
tttggtgcctccTGGCAGGGGCACTTTTTGCACTCCCCTTAACGACG‑TGAGTTTTTATTCCGCCCCCTTTTGCTGGAAACCAAAAAAAGGTTGTATCCAAACA‑GCCGTTCGTCCGTGTTTTTCAAAAAAATAAGCAAAACTACCGGAAAT‑TTAACA‑GTTTATTATCTGGTTAAATAAAAAAAAG‑TTTC‑CCC‑AAAAAAA‑AA‑TTCCATTA‑ACCGCCAATGCAGAGCAACTTCTGCAGCca < 2:73487/227‑1 (MQ=255)
gTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAC‑AA‑TTACATTT‑ACCGCCAATGCAAAGAAACTTCTGCAGCCACCGtt > 1:804838/1‑239 (MQ=255)
gTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTATGCAGCCACAGtt > 1:123546/1‑239 (MQ=255)
ccACGGGCAGCGGCATGCTTTGCACTACCGCAAACGCCAAAGAGTATTATTTCGACCCCATTATGCTGAAAACCAAAAAAA‑GGGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTAAAAAAAATAGGCACAACTACCAGGAAT‑TTATAA‑GTTTGATATTGGGCTAAATAAAAAGAAG‑GTTT‑CAC‑AAAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTAc < 1:538775/237‑1 (MQ=255)
cACGGGCAGCGGCATGTTTTGCCCTACCGCAAACGCCGAAGAGTATTATTCCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACgg < 1:201487/239‑1 (MQ=255)
gCAGGGGCATTCTTTGCACTCCCGATAACGCAAAAGGGTATTATTCCGACCCCATTATGCTGAAAACCAAAAAAG‑GTGGTATGCAAACA‑ACCGATCTGTCGGGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCGGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTa < 1:189169/236‑1 (MQ=255)
cAGCGGCATGCTCTGCACTACCCCTAACGCCGAAGAGTATTATTTGGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAAGTACCAGGAAC‑TTATCC‑GGTTGATATCTGGCGGAATAAAAAGAAG‑GTTT‑AAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGGCAAACTTCTGCAGCCACAGTTTCCGAAAGaaa > 2:1037968/1‑238 (MQ=255)
ggggctggCTTTGCACTCCCGCAAAAGCCGAAGAGTATTATTTCACCCCCATTATGCTTGAAACCACAAAAA‑GTGTTATGCAAACA‑ACCAATTTGTCGCTTTTTTCAAAAAAATATGCACAACTACCGGGAAT‑TTATCA‑GTTTGATTTCTGGCTAAAAAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGaaca < 1:74800/231‑1 (MQ=255)
gCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAACTATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAAATTTTGAAGCCACAGTTTACggaaaaaaac > 2:774820/1‑231 (MQ=255)
gCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGACC‑TTATCC‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCACATGCAGAGCAACTTCTTAAGCAACAAATTACGGAAGaaaaa > 2:761414/1‑239 (MQ=255)
gCTTTGCACTACCGCTAACGCCGAAGAGAATTATTTCGACCCCATTATGCTGGAAACCACAAAAC‑GTAGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCACAAAAATATGCACAACTACCAGGAAC‑TTTTCA‑GGTTGATATCTGGCTGAATAATAGAAAG‑GATT‑CAC‑AGAAAAA‑AA‑ATACATTT‑ACCCCCAATGCAACACAACTTCTCCATCCAAAATTTAAGGTATaaaaacaaagta > 2:1107967/1‑233 (MQ=255)
tttgcccccccGCCAACGGCGAAGATTTTTATTGCCACCCCTTTATTGGGAAAAACAAAAAGA‑GTGGTAAGAAAAAA‑ACCGACCTGTCGCGTTTTTAAAAAAAATATCCACAACTACCAGGACT‑TAATCG‑GGTTAATATCGGCTTAAAAAAAAAGAAG‑TTTT‑CAC‑AAAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAg < 2:26813/230‑1 (MQ=255)
tgtgctcgaCCGATAACGCCGAGGAGTTTGTTTCCGCCCCGATTGTCATGAAAACAAAAAAAA‑CTAGTGTGCAACCA‑TACTATCTTTCAGGTTTTTCAAAAAAATAGGCACATCTACGAGAAAT‑TAACGA‑GTTAAATATCTGTCTGAATAAAAAGAAG‑GTTT‑AAC‑AAAAAAC‑AT‑TTACTTTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAg < 2:635803/231‑1 (MQ=255)
ttccctccctcTAACGCCGAAGAGTATTATTTCGCCTCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCGATCGCGGTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATGT‑ACCTCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt < 2:858770/229‑1 (MQ=255)
tcccatACCTCAAACGCCAAAGGATATTATTTCGACCCAATTATGGTGAAAACCAAAAAAA‑GTGGTATGAAAACA‑ACCGATCTGCCGCGTTTTTAAAAAAAATAGGCACAACTACCAGAAAC‑TTATCA‑GGTTGATATCGGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACTTTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt < 1:102526/234‑1 (MQ=255)
tGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GGTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCTCCAATGCAGAGCAACTTCTGCAGCCACAGTTTCCGGTAGAACAACTACGTGAgat > 1:1294232/1‑237 (MQ=255)
tGCACTACCGATAACGCCGAAGAGTTTTATTCCGACCCCATTTTGCTGGAAACCAAAAAAA‑GGGGTATGCAAACA‑ACGGTTCGTCCGCGTTTTTCAAAAAAATATGCACACCTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCGAAAAAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCt < 1:25561/239‑1 (MQ=255)
aaCGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACCGTTTACGGGAGAACAACAAAGGAGGCTGGGCATTAAggg > 2:1140967/1‑238 (MQ=255)
aaCGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGt > 1:475594/1‑239 (MQ=255)
cGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACgg > 1:681730/1‑203 (MQ=255)
aaaGATTTTTATTTCGACCCAATTATGCTGAAACCCAAAAAAA‑GTGGTATGAAAACA‑ACCGATCTGTCGCGTTTTTAAAAAAAATATGCACAACTACAAGGAAC‑TTATCA‑GGTTAATATCTGGCTAAATAAAAAAAAG‑GTTT‑CAA‑AAAAAAA‑AA‑TTACTTTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGa < 1:128899/238‑1 (MQ=255)
attattTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCATAGAAACTTCTGCAGCCACAGTTTACGTAACAAAAACTACGTGAGCTGGGTATTAAGGGGGATGAAACCCCg > 2:792854/1‑239 (MQ=255)
cGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAACAAATATGCAAAACTACCAGGAAC‑TTATCA‑GGTTAATCTCTGGCGGAATAAAAAGAAG‑GTTG‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAAATTGTGCAGCCACAAGTTAAGGTAGAACAATTACTGGAGCCGGGAAAGAAGGGGGAAGAAAACCCgggcgggg > 2:673015/1‑233 (MQ=255)
agACCCCATTATGCTGGAACCCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAA‑TTATCA‑GGTTGATATCTGGCAGCATAAAAAGAAT‑GTTT‑CAC‑AGTAAAA‑AA‑TTACATTT‑ACCACCACTGCAACGAAACTTCTGCAGCAAAAGTTTACGGTAGAACAACTACGTAACCTGCGATTTAAGGTGGATAAAAACCCgggcctt > 2:274374/2‑233 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGTTCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGACTAAAAAGAAG‑GTTT‑CAA‑GGAATAA‑AA‑TTCCATTT‑ACCGCCAATGCAGAGTAACTTCTGAATCCACACTTTAAGGTAAAAAAACTCCGTAACCTGGGGATTAAGGGGGCTGAAAAccgcgggctgaca > 2:654394/1‑228 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTTAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCgctg > 1:1121337/1‑236 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACTATT‑ACCGCCAATGCAGAGCAACTTTTGCAGCCCCAGTTTACGGTAGAAAAACAACAGAAACTGGGCATTAAGGGGGATGAAAAACCGGCgctggag > 2:656089/1‑237 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACtt > 1:822789/1‑167 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCgctggct > 1:282890/1‑239 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCgctggct > 1:1041730/1‑239 (MQ=255)
aCCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCgctg > 1:86184/1‑236 (MQ=255)
atttgtccTGGAACCCAAAAAAA‑GTGGTATACAAACA‑CCCGATCTGTCGGTTTTTTAAAAAAAATATGCACAACTACAAGGAAC‑TTATCA‑GGTTGATATCTGGCTAAAAAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGaaa < 1:608135/232‑1 (MQ=255)
aTTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGGGGATGAAATCCCGGCGCTGGCTGaaaa > 1:1148574/1‑239 (MQ=255)
aTTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAGGTGGATGAAATCCCGGCGCTGGCTGaaaa > 1:111588/1‑239 (MQ=255)
tGCGGGAAAACAAAAAAA‑TGGGGATGAAAAAACACCCGTTTGTCGTGTTTATAAAAAAAATAAGCAC‑ACTAACAAGAAA‑AGAAGAGGGTTTATTTCCGGCAGAATAAAAAGATG‑TTTT‑CAA‑AGAAAAA‑AT‑TTACAGTT‑ACCGTCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAgg < 2:570059/239‑2 (MQ=255)
ggAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGGATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATAACg > 1:905786/1‑239 (MQ=255)
ggAAACCAAAAAAA‑GGGTTAAACAAACT‑CCTGATCGGTCGTGTTTAACAAAAAAATAGTCAAAACTACCAGGATG‑TTAACA‑GTTTAATATCGCGATGAAAAAAAATGAG‑TTTC‑CAC‑AGAAAAA‑AT‑TTACATTT‑ACCGCCAAGGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACg < 2:828620/239‑1 (MQ=255)
gAAACCACAACAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTCGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCCCGGCCTGAAAAAGATgcaga > 1:570059/1‑235 (MQ=255)
gAAACCACAACAA‑ATGGTATGCAAACA‑ACCGATCTGATGCGTTTTTGAAAAAAATATGCACAACTACAAAGAAA‑TTATCA‑GGTTGATATCTGAGTAACTCAAAATACA‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAATTTCGGCATCCACAATTTACGGCAGCACACCCATGTGCACTCGGTATTAAGGTGGAGGAAAGACCGACGCTAGTTGATAAAAAtagaaa > 2:1195925/1‑234 (MQ=255)
gAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGGATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGa > 1:1165556/1‑239 (MQ=255)
cacaAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCg > 1:168983/1‑239 (MQ=255)
aaaaaa‑GGGGTTGGAAAACA‑CCCGATCTGTCGCGTTTTCAAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GTTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTg < 1:774820/238‑1 (MQ=255)
tgtaaTGCAAACA‑ACCGATCGGTCGCGTTTTTCAAAAAAATATCCACAACTACCAGAAAC‑TTACAA‑GGTTGATATCGGGCGAAAAAAAAAGAAG‑TTTC‑CAA‑AAAAAAA‑AA‑TTCCATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCaa < 1:289821/233‑1 (MQ=255)
gTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGAATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTc > 1:622229/1‑238 (MQ=255)
acCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACaaa > 1:1058972/1‑238 (MQ=255)
attgggcggtttttaCAAAAAAGAATCAAAAACTACAAGGACT‑TTATAG‑GGTTAATATCTGGCTAAAAAAAAAGAAG‑GTTT‑CAC‑AAAAAAA‑AA‑TTACTTTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCAtt < 1:100878/229‑1 (MQ=255)
aTCTGTCGCGTTTTTCAAAAAAATATCCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGAAGCCACAGTTTACGTTAGAAAAACTACATGAGCTGGGGATTAAGGGGGATGAAATCCCGGCCCTGGCTGAAAAAAAGGACGAAAACGAGACCACATCCCTTGaaaaaacaat > 2:919087/1‑234 (MQ=255)
tttGTTGCTTTTTTCAAAAAAAATTGCCCAAAATCCAAGAACTTTACCA‑GTTTGATACCGGGCAAAAAAAAAAGAGG‑TTTT‑CAA‑AAAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCAtt < 1:502302/237‑1 (MQ=255)
tctgcgggTTTTTAAAAAAAAAGTGCAAAACTCCCAGGAAC‑TTATCG‑GGTTGATATCGGGTGAAAAAAAAAGAAG‑GTTT‑CAA‑AGAAAAA‑AA‑TTAAATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTcc < 1:1037968/232‑1 (MQ=255)
tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTTAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGCCGAAAGCGGGATCAACCAACGTGAACAAACAAATCCCgg > 2:445917/1‑239 (MQ=255)
tCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTGGCTTGAACAAATCATTCCCgg > 1:175020/1‑239 (MQ=255)
gcgTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATAATTCCCGGTa > 1:50718/1‑239 (MQ=255)
tttttAAAAAAAATATGCACAATTCCCGGGAAT‑TTACCG‑GGTTAATATCTGATAGAACAAAAAGAGG‑TTTT‑CAA‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAg < 1:286060/239‑1 (MQ=255)
aaaaaaaaTATGCACAACTACCGGGAAT‑TTAAAA‑GTTTGATATCTGGCTGAAAAAAAAGAAG‑TTTC‑CAC‑AGAAAAA‑AT‑TTACATTT‑CCCGCCAATGCAGAGCAACGTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAgctgct < 1:286376/238‑1 (MQ=255)
aaCTACCAGGAAC‑TTATCA‑GGTTGCAATCTGGCTGAATAAAAAGAAG‑GCTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCAGGCGCTGGCTGAAAAAGCAGACGATAGCGTGAACAACTCGCTTGAACAAATAATTCCCGGAACAGCTGCTGAATTTGATTTCAat > 1:1227488/1‑239 (MQ=255)
cTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACCTGGGCTGGGAATTAAGGTGGATGAAATCCCGGCGCTAGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACCGCTGCTGCATTTGATTTCAatca > 1:794535/1‑239 (MQ=255)
ccAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGTTAGCGTGATCAAATCGCTTGAACAAATCATTCCCGGTAAAGCTCATGAATTTGTTTTCAAtcatca > 2:161383/1‑239 (MQ=255)
aaC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCa > 1:99052/1‑237 (MQ=255)
aaC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCa > 2:915350/1‑237 (MQ=255)
c‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACa > 1:836347/1‑206 (MQ=255)
ttATAA‑GGATGATATCTGGCTGAATAAAAAGAAG‑GTGT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGATTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAACTGTTGAATTTGATTTCActcaaaaaaaccaaa > 2:709055/1‑228 (MQ=255)
aTCA‑GGGTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATACAGGCGCTGGCTGAAAAAGATGACGATAGCGGGATCAACTCGCTTGAACAAATCATTCCCGGTAAAGCTGCTGAATTTGATTTAAATAACCAGCAAATTAAt > 2:871299/1‑239 (MQ=255)
gTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTAAAGCTGCTGAATTTGATTTCAATAATCAGCAACTTAATTTGAg > 1:494206/1‑239 (MQ=255)
tgtttacggcttGAAT‑AAAAGAAA‑GTTT‑TAC‑AAAAAAA‑AA‑ATTCATTTGTCCGACAATTCCGAGCAACTTAGGTCGACACAGTTTACGTTTGAACAACGATGTGAGTTGGGTATTACGGTGGATGAAATCCCGGCTCTGGCTGAAAAAGATGAAGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCa < 2:639236/228‑1 (MQ=255)
gATATCTGGCTGCATAAACAGAAG‑GTTT‑CAC‑AGAACAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGACACAGTTTACGGTAGAACAACTAAGTGAGCTGGGTATTAAGGAGGCTGAAATCCCGGCGCTGGCTGAAAAAAGTGACGCTCGCGTGGTCAACTCGCTTGGAACAATCATTCCCCGGACACGTGAGGAATTTGGTTTCCATCACCAGCAAATTAAATTGACCAt > 2:782425/1‑239 (MQ=255)
gATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGGGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCCACTTAATTTGAGCAt > 1:639236/1‑239 (MQ=255)
gATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAA‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTACGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGTTTTTAATAATCAGAAACTTAATTTGTGCa > 2:694615/1‑238 (MQ=255)
aacgggCTGAAAAAAAAGAAG‑TTTA‑CAA‑AGAAAAA‑AT‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTcc < 1:657943/235‑1 (MQ=255)
atctggcgaaaaaaaGAAGTGTTTCCAC‑AGAAAAA‑AA‑TTGCATTG‑ACCCCCAAGGGAAAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAAACACGTTAGCTGGGTGTTAAGGTGGATGTAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCAATcc < 2:282890/229‑1 (MQ=255)
tGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCa > 1:835513/1‑239 (MQ=255)
ggCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGACTTTGATTTTCATCATCACAAAATTAATTTGAGCATTCCCCaa > 2:146756/1‑239 (MQ=255)
cTGAATAAAAAGAAG‑GTTT‑CAA‑AGAAAAA‑AA‑TTCCATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa < 1:915350/238‑1 (MQ=255)
cTGAAAAAAAAGAAG‑GTTT‑CAA‑AAAAAAA‑AT‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa < 1:792854/238‑1 (MQ=255)
cTGAAAAAAAAGAAG‑GTTA‑CAA‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTATGCAGCCAAAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa < 1:654394/238‑1 (MQ=255)
tGAAAAAAAAAAAA‑GGTT‑CAC‑AAAAAAATAG‑TTAATGTT‑ACGCCCAAAGCAGAGCAAGTTCTGCAGGTCAATGTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCGTGAACAAATCATTCCCCGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCaaa < 2:592410/238‑1 (MQ=255)
gAAAAAAAAGAAT‑GTTT‑CAA‑AGAAAAA‑AA‑TTACATTT‑CCCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTg < 1:184281/239‑1 (MQ=255)
aacaaatGATG‑GTTA‑CAA‑AGAAAAA‑AT‑TTTTAGTG‑CCAGCCAATGGAAGGTAACTTCTGCAGCCACAGTTTTCGGTGATACAACTGCGTTAGCTGGGTATTAAGGGGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCGTGCACAAATCATTCCCGGTACAGCTGCTGAATTTGAGTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa < 2:794535/236‑1 (MQ=255)
aTAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGc > 1:921587/1‑238 (MQ=255)
aTAAAAAGAAG‑GTTT‑CAA‑AGAAAAA‑AA‑TTACATTT‑ACCGACAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa < 1:656089/239‑1 (MQ=255)
aTAAAAAGAAG‑GTTT‑ACA‑AAAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa < 1:871299/239‑1 (MQ=255)
aaaaaaaGAG‑TTTT‑CACAAAAAAAA‑AA‑TTATTTTT‑CCCCCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa < 2:120802/238‑1 (MQ=255)
aaaaaaGAAG‑GTTT‑CAA‑AAAAAAA‑AATTTACATTC‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCa < 1:785888/238‑1 (MQ=255)
aaaaaGAGT‑GTTT‑AAA‑AAAAAAA‑AT‑TTAAGTTT‑CCCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACt < 1:967662/239‑1 (MQ=255)
t‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGc > 1:108869/1‑239 (MQ=255)
cac‑aGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGTTTTCAATCATCAGCAACTTAATTTAAGCATTCCCCAAATTGCACTGTACCGTGATGCa > 2:395132/1‑239 (MQ=255)
cc‑aGAAAAA‑AT‑TTACTTTC‑CCCGCCAATGCAGAGCAACTTCTGCAGGCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGCaa < 1:1258709/238‑1 (MQ=255)
ac‑aAAAAAA‑AT‑TTTCTTTC‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGCaa < 2:622229/239‑1 (MQ=255)
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AACGCACACCGAAACAGTTGGCGCTCATCATCAAACGTTGTTTGCCGATGGTGCTCACTGGCAGCGGCATGCTTTGCACTACCGCTAACGCCGAAGAGTATTATTTCGACCCCATTATGCTGGAAACCACAAAAA‑GTGGTATGCAAACA‑ACCGATCTGTCGCGTTTTTCAAAAAAATATGCACAACTACCAGGAAC‑TTATCA‑GGTTGATATCTGGCTGAATAAAAAGAAG‑GTTT‑CAC‑AGAAAAA‑AA‑TTACATTT‑ACCGCCAATGCAGAGCAACTTCTGCAGCCACAGTTTACGGTAGAACAACTACGTGAGCTGGGTATTAAGGTGGATGAAATCCCGGCGCTGGCTGAAAAAGATGACGATAGCGTGATCAACTCGCTTGAACAAATCATTCCCGGTACAGCTGCTGAATTTGATTTCAATCATCAGCAACTTAATTTGAGCATTCCCCAAATTGCACTGTACCGTGATGCAA > NC_000913/3288842‑3289315
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
