Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F9 I0 R1 83 124.0 2465218 96.8% 2386331 230.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,551,917 A→C 10.5% V186G (GTG→GGG)  malP ← maltodextrin phosphorylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,551,9170AC10.5% 389.5 / 4.4 137V186G (GTG→GGG) malPmaltodextrin phosphorylase
Reads supporting (aligned to +/- strand):  ref base A (71/47);  new base C (2/14);  total (73/64)
Fisher's exact test for biased strand distribution p-value = 3.43e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 137 total aligned reads displayed.

GCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTACCCAGCGCC  >  NC_000913/3551683‑3552147
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                          
     aTGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGc                                                                                                                                                                                                                                 <  1:341259/239‑1 (MQ=255)
            tCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATc                                                                                                                                                                                                                            >  1:963539/1‑237 (MQ=255)
              gTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCt                                                                                                                                                                                                                         >  1:656485/1‑238 (MQ=255)
              gTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCt                                                                                                                                                                                                                         >  1:67386/1‑238 (MQ=255)
              gTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCt                                                                                                                                                                                                                         >  1:173494/1‑238 (MQ=255)
              gTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCt                                                                                                                                                                                                                         >  1:597579/1‑238 (MQ=255)
              gTTGGGATAGAAACTTTTGCTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAACCCCCGTCGTAAAATTTAGCCAGAACAACCGGTTCCGCGTGCGGCGCCTGCCACAGACGCCGAGCCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAAGGGTAAACTCCGGCTCCCAGCATCCGTCTTTCGTCATTTTAC‑‑CGCCAATCCCTa                                                                                                                                                                                                                        <  2:600553/239‑1 (MQ=255)
                   tagaaagaCCTTGGGTCATTTTTTCCGAATTGAGTCCCGGCTGTGCGGCACAAAGAAAATCCCGGCTGTTAATTTTAGACGGATAAAACGGAGGGGCGTGCGGCCCCTGCCACAGACGCAGCGGGGGCGCCACGCCATTACGATAGCGGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTg                                                                                                                                                                                                                    <  2:866985/233‑1 (MQ=255)
                         gaACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAAATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATc                                                                                                                                                                                                              <  1:664166/238‑1 (MQ=255)
                             tttGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGt                                                                                                                                                                                                          >  1:379406/1‑238 (MQ=255)
                              ttGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGt                                                                                                                                                                                                          >  1:1024080/1‑237 (MQ=255)
                              ttGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGt                                                                                                                                                                                                          >  1:460497/1‑237 (MQ=255)
                              ttGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGAGCCACGCCATTACGATAGCCGACAACGGGGAGCTCCCACGCTTGACCGGCAATGGGAAACTCCGACTCACAGAGTCCGTCTTTCGTCCCTTTAC‑‑CGCCAATCCCTCCCTGCACATcccct                                                                                                                                                                                                          >  2:221999/1‑234 (MQ=255)
                               tGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCt                                                                                                                                                                                                       <  1:1108075/239‑1 (MQ=255)
                                    aGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCCCATCCAGTGCTTCg                                                                                                                                                                                                    >  1:526931/1‑237 (MQ=255)
                                    aGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGtt                                                                                                                                                                                                  >  2:321959/1‑239 (MQ=255)
                                      tttttCCGCATGGAGGCCCTGCGTTGCGGCACCCAAGAAATCCCCGCCTTTAAATTTAGTCAGATCAACCGGATGCGCGTGCGCCGCCTGCCACAGACGCAGCGGCTCCGCCCCGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATc                                                                                                                                                                                                              <  2:1184479/225‑1 (MQ=255)
                                               atggATGCCGTGCTGTCCGGCACACAAAAAATCCCCGTGGTAAAATTTAGTCAGACAAAACGGTGGCGCGTGCGTCGCCGGCCACAGCCGCAGCGGTGGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACCCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAAc                                                                                                                                                                                        <  2:208278/235‑1 (MQ=255)
                                                ttGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCg                                                                                                                                                                                                    >  1:1184479/1‑225 (MQ=255)
                                                  gATGCCCTGCTGTGCGGCACGCAAGAAACCCCCGTCGTAAAATTTAGTCAGACCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACg                                                                                                                                                                                    <  2:180839/239‑1 (MQ=255)
                                                         ggcggtgcGGCACACAAAAACTCCCGGCCGTAAAATTTAGCCGGATCAACCGGAGGCGCGGGCGTCGCCGGCACCAGACGAAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACCCCGGCTCCCAGCGTCCGTTTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGtt                                                                                                                                                                             <  2:1166436/232‑1 (MQ=255)
                                                             gTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACt                                                                                                                                                                          >  1:1224927/1‑238 (MQ=255)
                                                                cGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGa                                                                                                                                                                      >  2:663133/1‑239 (MQ=255)
                                                                             ttccccttctttAAATTTATCCAGACCAAACGGAGCCGCGGGCGCCGCCTGCCACAGACGCAGCGCCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCCCGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCg                                                                                                                                                         <  1:1137851/229‑1 (MQ=255)
                                                                             atcccctgcgtAAAATTTATCCAGATCAAACGGATGCGCGTGCTGCGCCTGCCACAGCCGCGGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTCCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCg                                                                                                                                                         <  2:1194499/231‑1 (MQ=255)
                                                                                aCCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑gc                                                                                                                                                     >  1:753404/1‑238 (MQ=255)
                                                                                  cgtcgtTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCt                                                                                                                                                  >  1:1044473/1‑239 (MQ=255)
                                                                                     cgtTAAATTTCGTCGTATCACCAGGAGGGGCGGCCTCCGCCAGCCACGGACGCAGCGGCGGCGCCACGCCATTACGATCGCCGACAACGGGGAAATCCCCCGCTCGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCa                                                                                                                                               <  2:28148/239‑1 (MQ=255)
                                                                                      gtTAAATTTACTCAGTTCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATACCACGCTTGACCGGTAATGTTAAACTCCGGCTCCCAGCGTACGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGCACCACGGGGAGTTACGGCTCTGCCGGTCATCCG‑‑GCGCCTcc                                                                                                                                               >  2:449000/1‑237 (MQ=255)
                                                                                               aGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTg                                                                                                                                      >  1:484678/1‑238 (MQ=255)
                                                                                                 tCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCa                                                                                                                                   >  2:400643/1‑239 (MQ=255)
                                                                                                 tCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGGAGGTACTGCGATGGCCGGAATCCGCCGCGCTTCAACCTGTTTg                                                                                                                                      >  2:1048034/1‑238 (MQ=255)
                                                                                                  cAGATCAAACGGAGGCGCGTGCGTCGCCTGCCCCAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCAt                                                                                                                                  <  1:481553/239‑1 (MQ=255)
                                                                                                  aaGATCAAACGGATGCGCGTGGTTCCCCTCCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCCCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCAt                                                                                                                                  <  1:853944/238‑1 (MQ=255)
                                                                                                     aTCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCATCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCg                                                                                                                                >  1:156068/1‑238 (MQ=255)
                                                                                                     aTCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTCCTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCg                                                                                                                                >  1:174779/1‑238 (MQ=255)
                                                                                                     aTCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCg                                                                                                                                >  2:1208058/1‑238 (MQ=255)
                                                                                                        aaccgaaTGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGCCCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCCCTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACaa                                                                                                                            <  1:679124/233‑1 (MQ=255)
                                                                                                          aCGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACaaaa                                                                                                                          >  2:472876/1‑239 (MQ=255)
                                                                                                               tGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTg                                                                                                                                                                                                                    >  2:260494/1‑146 (MQ=255)
                                                                                                               tGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTg                                                                                                                                                                                                                    <  1:260494/146‑1 (MQ=255)
                                                                                                               tGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGCCAAAAGACTg                                                                                                                     >  1:652898/1‑239 (MQ=255)
                                                                                                               tGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTg                                                                                                                     >  2:1156895/1‑239 (MQ=255)
                                                                                                                 cgcgTGCGTCGCCTGCCCCAGACGCAGCGGCTGCGCCACGCCATTACGAGAGCCCACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCCGCTCCCAGCGTCCGCCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCACTGCTTCGTTGTGGCGGAACCACGGGGAGTTACTGCCATGCCAGTCATCCC‑‑CCTCTTCAACCTGTTTGCCCTCTAcccccgcctggg                                                                                                                   >  2:649175/1‑228 (MQ=255)
                                                                                                                   cgtgcgtCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCgg                                                                                                                 >  1:711332/1‑239 (MQ=255)
                                                                                                                     ggcgcccccTGCCACAGCCGCAGGGGCTGCGCCCCGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAACCCCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGa                                                                                                                <  2:810091/231‑1 (MQ=255)
                                                                                                                     gccgtCCCCGGCCACAGCCGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGACCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGa                                                                                                                <  2:613745/236‑1 (MQ=255)
                                                                                                                        gtCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACaa                                                                                                            <  1:334838/239‑1 (MQ=255)
                                                                                                                        gtCCCCTGCCACAGACGCCGCGGGTGCGCCCCGCCATTAAGATAGCCGAAAACGGGGGGATCCCCCGCTTGACCGGTAATGGTAAACCCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACaa                                                                                                            <  2:1217538/239‑1 (MQ=255)
                                                                                                                         tgcccTGCCCCAGAGGCAGGGCGTGCGCCGCGGCTTTCCGATAGCCGACCGCGGGGAGGCCCCTCGCTTGACCGTTAATGGTAAACACCGGCTCCCAGCGTCCGTCTTTCTCCCCTTTGC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCATCCTGTTTGCCATCGACAAAAGACTGGCGGAACaa                                                                                                            <  2:833038/235‑1 (MQ=255)
                                                                                                                             cgcccccaGACGCAGCGGCTGCGCCCCGCCATTACGATAGCCGACAACGGGGAGATCCCCCGCTTGACCGGTAATGGAAACCCCCGGCTCCCAGCGTCCGTCTTTCGTCCCTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCat                                                                                                       <  2:753404/233‑1 (MQ=255)
                                                                                                                              acccgcaGACGCGGCGGTTGCGCCACGCCATTACGACGGCCACCAAGGGGGAGAGCCCACGTTTGACGGGTAATGGGAACCGCCGGCTCCCAGGGTGCGTCTTTCGTCACGTTAC‑‑CGCCAATCCCTAGCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCat                                                                                                       <  2:460497/233‑1 (MQ=255)
                                                                                                                                        gcggcggcgtggccacgccaTTCCGATAGCGGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCCCTTGAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGAGGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTc                                                                                            <  1:506831/228‑1 (MQ=255)
                                                                                                                                        gccgCGGCTGCGCCCCGCCATTACGATAGCCGACAACGGGGATCTCCCCCGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTc                                                                                            <  1:506337/236‑1 (MQ=255)
                                                                                                                                        cgaGCGGCTGCCCCACCCAATCAGGATAGCCGACAGCTGGGTGACCCCCCTCTTGCCCGTCAATGGTAACCCCCGGCCCCCACCGCCCGTCTTCCGTCAGTTTCC‑‑CGCCAATCCCTCCCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTc                                                                                            <  2:526931/237‑1 (MQ=255)
                                                                                                                                          aGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCCTCGACAACAGACTGGCGGAACAAACCCTATTGATAGTTCAg                                                                                          >  2:905157/1‑239 (MQ=255)
                                                                                                                                          aGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCCTATTGATAGtttcg                                                                                          >  2:327087/1‑236 (MQ=255)
                                                                                                                                          aGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAg                                                                                          >  1:869945/1‑239 (MQ=255)
                                                                                                                                            cggggccgcaacgcaaTTCCGAGCGCCAGCAACGGGGAGTCCCCCCGCTTGACCGGTAATGGAAACCGCCGGCTCCCAGCGCCCTTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGa                                                                                         <  2:525940/232‑1 (MQ=255)
                                                                                                                                            cGGCTGCGCCACGCCATTCCGATAGCCGACAACGGGGAGATCCCACGCTTGACCGTTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCCCTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGa                                                                                         <  1:715918/238‑1 (MQ=255)
                                                                                                                                               cTGCCCCCCGCCATTTGCATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGAAAACTCCGGCTCCCAGGGCCCGTCTTTCGTCCCTTAAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCg                                                                                      <  2:1209075/238‑1 (MQ=255)
                                                                                                                                                 gcgcCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAA‑GGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTaa                                                                                   >  1:260113/1‑238 (MQ=255)
                                                                                                                                                  cgccacgcctTTACGACAGCCGACACCGGGGAGAGCCCACGCTTGACCGGTAAGGGTAACCCCCGGCTCCCAGCGTCCGTCTTTCGTCCCTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAAc                                                                                  <  2:116751/239‑1 (MQ=255)
                                                                                                                                                  cgccaccccaTGCCGATAGCCGACAACGGGGAGATCCCCCGCTTGACCGGTAATGGTAACCTCCGGCCCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAAc                                                                                  <  2:131421/239‑1 (MQ=255)
                                                                                                                                                   gccacgccaTTCCGATAGCCGACAACGGGGAGATCCCACGCTTGACCGTTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAAc                                                                                  <  1:358326/238‑1 (MQ=255)
                                                                                                                                                   gccacgccaTTACGATGGCCGCAAACGGGGAGTTCCCACGTTGGACCGGTATGGGTAAACTCGGGCTCCCAGCGTCCGTCTTGCGTCACTTGAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAAc                                                                                  <  2:67386/238‑1 (MQ=255)
                                                                                                                                                   gccacgccaTTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAAc                                                                                  <  1:1208058/238‑1 (MQ=255)
                                                                                                                                                   gccacgcaaTTACGATAGCCCACAACGGTGAGATCCCCCGCTTGACCGGTAATGGTAACCTCCGGCCCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAAc                                                                                  <  2:1087561/238‑1 (MQ=255)
                                                                                                                                                             tACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGa                                                                                                  >  1:953635/1‑212 (MQ=255)
                                                                                                                                                              gcGATAGCCGACAAGGGGAAGTTCCCTCCCTTGACCGTTAATGGTAAACCCCGTCCCCCAGCGCCCGTCTTCCGTCCCTTTGC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTCGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGa                                                                        <  2:656485/236‑1 (MQ=255)
                                                                                                                                                                  tAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTACCGCGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTg                                                                     >  2:1082233/1‑238 (MQ=255)
                                                                                                                                                                   agcataCAACGGGTAGATCCCACGCTTACCCGGTAATGGTAAACCCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCg                                                                 <  1:253052/234‑1 (MQ=255)
                                                                                                                                                                    gCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCg                                                                 >  1:424723/1‑238 (MQ=255)
                                                                                                                                                                     ccGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGAc                                                               >  1:859199/1‑239 (MQ=255)
                                                                                                                                                                         cAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGtt                                                           >  1:590821/1‑239 (MQ=255)
                                                                                                                                                                            cGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGcc                                                        >  1:1089298/1‑239 (MQ=255)
                                                                                                                                                                               ggggaTCCCACGCTTGACCGGTAAGGGAAACCTCCGGCTCCCAGCGTCCGTTTGTCGTCACTTTCC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCAt                                                      <  1:346343/235‑1 (MQ=255)
                                                                                                                                                                                   aTCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAg                                                  >  1:1228961/1‑238 (MQ=255)
                                                                                                                                                                                     cccACGCTTGCCCGGTAAGGGTAACCCCCGCCTCCCAGCGCCCGTCTTTCGTCCCTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCg                                               <  2:54364/239‑1 (MQ=255)
                                                                                                                                                                                        aCGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGCGTCGAgg                                            >  1:482823/1‑239 (MQ=255)
                                                                                                                                                                                             tGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGGGGAAGc                                        >  1:1122354/1‑238 (MQ=255)
                                                                                                                                                                                             tGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCa                                       <  1:321959/239‑1 (MQ=255)
                                                                                                                                                                                              gACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGCGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCCGTTTGCCATTGACAAAAGACTGGCGGAACAAACCATATTTATAGGTCAGACCGTAAACCCTCGCAGACTGCCCGGCAGGTGTCATTGGGTCGAAGTAGCa                                       >  2:1836/1‑238 (MQ=255)
                                                                                                                                                                                               aCCGGTAATGGTAAACTGCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAA‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGGTGTGGCGGAAGCACTGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCCTCAACCTGTTTGCCACCGACAAAAGACCGGCGGAACCAACCATATTTGTAGTTCAGACCGCCACCCGTCGCAGACTGACCGCCAGTTTCCCTTGAGTCTAGCCAGCAc                                      >  2:715489/1‑238 (MQ=255)
                                                                                                                                                                                               aCCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACCAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGCACGACAGTTGCCATTGAGTCGGGGaaacca                                      >  2:351476/1‑234 (MQ=255)
                                                                                                                                                                                               aCCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAACACTGGCGGAACAAACCATATTGa                                                                                                  >  1:879039/1‑178 (MQ=255)
                                                                                                                                                                                                       cggTAAACCCCGTCTCCCCGCGGCCGTCTTCCGTCTGTTTCC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGa                             <  2:1094335/238‑1 (MQ=255)
                                                                                                                                                                                                         gTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACg                           >  1:1164730/1‑239 (MQ=255)
                                                                                                                                                                                                              cTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTTCCATTGAGTCGAGGAAGCACGCCGCCAGCCGTCCCa                      >  2:894157/1‑239 (MQ=255)
                                                                                                                                                                                                              cTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCa                      >  1:1192159/1‑239 (MQ=255)
                                                                                                                                                                                                              cTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTAAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCCTTGAGTCGAGGAAGCACGCCGCCAGACGTCCCa                      >  1:782803/1‑239 (MQ=255)
                                                                                                                                                                                                                 cGGCTCCCAGCGTCCGTCTTTGGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGac                   <  1:1202013/239‑1 (MQ=255)
                                                                                                                                                                                                                 cGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGac                   <  1:217209/239‑1 (MQ=255)
                                                                                                                                                                                                                 cGGCCCCCAGCGTCCGTCTTTCGTCACTTGAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGac                   <  1:545275/239‑1 (MQ=255)
                                                                                                                                                                                                                   gCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGacc                  >  1:804896/1‑238 (MQ=255)
                                                                                                                                                                                                                   gCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGacc                  >  1:393955/1‑238 (MQ=255)
                                                                                                                                                                                                                           cgtccgtcTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTAc          >  2:722581/1‑238 (MQ=255)
                                                                                                                                                                                                                            gtcgtgcTTTCGTCCCTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTAcc         <  2:1044473/232‑1 (MQ=255)
                                                                                                                                                                                                                            gtccgtcTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTAcc         <  1:1156895/238‑1 (MQ=255)
                                                                                                                                                                                                                                  cgtgcGTCCCTTTGC‑‑CGCCAATCCCTTCCTGCACATCCAGTGCTTCGTTGGGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTACCCAGCGcc  <  2:652898/235‑1 (MQ=255)
                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                          
GCAGTATGGTTGTCGTTTGGATAGAGAACTTTGGTCAGTTTTTCCGCATTGATGCCCTGCTGTTCGGCACGCAAGAAATCACCGTCGTTAAATTTAGTCAGATCAAACGGATGCGCGTGCGTCGCCTGCCACAGACGCAGCGGCTGCGCCACGCCATTACGATAGCCGACAACGGGGAGATCCCACGCTTGACCGGTAATGGTAAACTCCGGCTCCCAGCGTCCGTCTTTCGTCACTTTAC‑‑CGCCAATCCCTACCTGCACATCCAGTGCTTCGTTGTGGCGGAACCACGGGTAGTTACTGCGATGCCAGTCATCCG‑‑GCGCTTCAACCTGTTTGCCATCGACAAAAGACTGGCGGAACAAACCATATTGATAGTTCAGACCGTAACCCGTCGCAGACTGACCGACAGTTGCCATTGAGTCGAGGAAGCACGCCGCCAGACGTCCCAGACCACCGTTACCCAGCGCC  >  NC_000913/3551683‑3552147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A