Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,208,505 |
G→A |
R462R (CGG→CGA) |
b2122 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,208,505 | 0 | G | A | 99.5%
| 696.9
/ NA
| 204 | R462R (CGG→CGA) | b2122 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (107/96); minor base C (0/1); total (107/97) |
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 211 total aligned reads displayed.
TGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATG > NC_000913/2208415‑2208593
|
gCCTGGCAAATGTGGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACct < 1:5570660/93‑1 (MQ=255)
cTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACctct > 2:5480903/1‑93 (MQ=255)
cTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACctct > 2:3572302/1‑93 (MQ=255)
tGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCGCTCGCCTGCATACGACCTCtt > 2:4170793/1‑93 (MQ=255)
tGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCtt < 2:6752798/93‑1 (MQ=255)
tGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCtt > 1:1965425/1‑93 (MQ=255)
tGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCtt < 1:2699635/93‑1 (MQ=255)
tGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCtt > 2:3119548/1‑93 (MQ=255)
ggaaaaTGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTa < 1:1483595/90‑1 (MQ=255)
ggCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTa > 2:1640299/1‑93 (MQ=255)
gCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTaa < 2:5850338/93‑1 (MQ=255)
gCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTaa > 2:4522318/1‑93 (MQ=255)
gCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTGGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTaa < 2:3154496/93‑1 (MQ=255)
cAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAAt > 2:1653163/1‑93 (MQ=255)
cAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAAt < 1:7328808/93‑1 (MQ=255)
cAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAAt < 1:516909/93‑1 (MQ=255)
aaaTGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATc < 1:5805710/93‑1 (MQ=255)
aaTGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGGTTTGCGGCAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCa < 2:1326215/93‑1 (MQ=255)
aTGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAg < 2:4756287/93‑1 (MQ=255)
tGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAgg < 1:7868227/93‑1 (MQ=255)
gTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTGTTAATCAGGt < 2:7705175/93‑1 (MQ=255)
gTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCACCCCGCCTGCATACGACCTCTTAATCAGGt > 1:2128957/1‑93 (MQ=255)
gtGAGCGCGCCGAGACGCCAGCCGGGCATTGCGGCTTTGCGGGAATATTTACGCCAGCGCCCCCCCGCCTGCATACGACCTCTTAATCAGGTc < 2:5535877/92‑1 (MQ=255)
tGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCg < 1:5885056/93‑1 (MQ=255)
tGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCCGCATACGACCTCTTAATCAGGTCg > 1:25770/1‑93 (MQ=255)
gAGCGCGCCGTTCCGCCAGCGGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGa < 2:6586293/93‑1 (MQ=255)
gAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGGCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGa < 2:469633/93‑1 (MQ=255)
ggcgcgcCGTTACGCCAGCCGGGCATTGTGGCTTGGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGAt < 2:4247822/92‑1 (MQ=255)
gcgcCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAAc < 1:317708/93‑1 (MQ=255)
cgcCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGGATATTTACGCCCGGGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATaaat > 2:3751313/1‑91 (MQ=255)
ccGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACtta < 2:7408231/93‑1 (MQ=255)
gtgaCGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACttatt < 1:954523/90‑1 (MQ=255)
gTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACttatt > 2:2793192/1‑93 (MQ=255)
ttACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACttattt < 1:3486944/93‑1 (MQ=255)
ttACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACttattt > 1:5862561/1‑93 (MQ=255)
ttACCCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACttattt > 2:4016733/1‑93 (MQ=255)
tACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACttattta < 2:2453515/93‑1 (MQ=255)
tACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACttattta < 1:1431224/93‑1 (MQ=255)
cGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTtatttatt < 2:7593391/93‑1 (MQ=255)
gCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTc < 1:6225549/93‑1 (MQ=255)
gCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTc < 1:7120910/93‑1 (MQ=255)
ccAGCGGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCt < 2:6915667/93‑1 (MQ=255)
ccAGCCGGGCATTGTGGGTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCt < 1:2055198/93‑1 (MQ=255)
ccAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCt > 1:7541565/1‑93 (MQ=255)
ccAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCt < 1:4660829/93‑1 (MQ=255)
ccGGGCATTGTGGCTTTGCGGGAATATTTACGCCCGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGCTCGATAACTTATTTATTCTGCCg < 1:7737257/93‑1 (MQ=255)
gggCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGt > 2:6148643/1‑93 (MQ=255)
aTTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCt > 1:125167/1‑93 (MQ=255)
ttGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTg > 1:1582805/1‑93 (MQ=255)
ttGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTg > 2:2101745/1‑93 (MQ=255)
gtgGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAg > 2:6480265/1‑93 (MQ=255)
ggtgttGCGGGAATATTTACGCCAGCGCCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAgtg < 2:1943422/89‑1 (MQ=255)
ggCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAgtg > 2:6672026/1‑93 (MQ=255)
gCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAgtgt > 1:103884/1‑93 (MQ=255)
gCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAgtgt > 2:5344897/1‑93 (MQ=255)
gCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAgtgt > 1:418921/1‑93 (MQ=255)
cTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTa > 1:1611864/1‑93 (MQ=255)
tttGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTAt < 1:1902375/93‑1 (MQ=255)
tttGCGGGAATATTTACGCCAGCGCCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTAt < 2:5901462/93‑1 (MQ=255)
ttGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTAtt < 2:627284/93‑1 (MQ=255)
gCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTc < 1:3428125/93‑1 (MQ=255)
gggAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGc > 1:3858831/1‑93 (MQ=255)
gggAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGc > 1:5305524/1‑93 (MQ=255)
gAATATTTACGCCAGCGCCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTc > 2:2637960/1‑93 (MQ=255)
atatTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCgg > 2:4772871/1‑93 (MQ=255)
atatTCACGCCCGCGCCCCCCCGCATGCATACGACCACTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCgg < 1:3768791/93‑1 (MQ=255)
tatTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTTAGTGTATTTCGCTCGGt > 1:7027211/1‑93 (MQ=255)
ttaccGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTg < 2:7249857/89‑1 (MQ=255)
ttACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTgg > 1:662351/1‑93 (MQ=255)
ttACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTACTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTgg < 2:4953722/93‑1 (MQ=255)
ttACGCCAGCGCCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTgg < 2:3510275/93‑1 (MQ=255)
aCGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGa < 1:2338507/93‑1 (MQ=255)
gCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGAca > 1:5285305/1‑93 (MQ=255)
gCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGATCGCTGAGTGTATTTCGCTCGGTTGTGAca > 2:3853436/1‑93 (MQ=255)
ccAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGAcag > 2:1165459/1‑93 (MQ=255)
cAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGAcagc < 1:4195879/93‑1 (MQ=255)
aGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGAcagca > 2:551532/1‑93 (MQ=255)
cGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACagcagc < 2:3693138/93‑1 (MQ=255)
gTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAgcc > 2:2373661/1‑93 (MQ=255)
gTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAgcc > 2:1506436/1‑93 (MQ=255)
gTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAgcc > 2:2213764/1‑93 (MQ=255)
tCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAgccg > 2:5734460/1‑93 (MQ=255)
ccccccGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAgccgc > 2:3354408/1‑93 (MQ=255)
ccccGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCa > 1:4400328/1‑93 (MQ=255)
cccGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAg > 2:6398594/1‑93 (MQ=255)
ccGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGa < 1:1647321/93‑1 (MQ=255)
cGCCTGCCTACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCCGCCGCCAAAc < 2:3053033/93‑1 (MQ=255)
ccTGCATACTACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTACCTGTGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGc < 1:4016734/93‑1 (MQ=255)
ccTGCATACGCCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGc < 2:6987268/93‑1 (MQ=255)
ccTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGc < 2:7467836/93‑1 (MQ=255)
cTGCATAGGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGTGAGCAGCCGCCAGACGCt > 2:7400389/1‑93 (MQ=255)
cTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCt < 1:5480904/93‑1 (MQ=255)
tGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTg > 2:3932872/1‑93 (MQ=255)
tGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGACGCCAGACGCTg > 2:2876266/1‑93 (MQ=255)
gCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTgg > 1:2050580/1‑93 (MQ=255)
cATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGa < 1:861004/93‑1 (MQ=255)
aTACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGAt > 1:1210691/1‑93 (MQ=255)
tACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATg > 1:3916098/1‑93 (MQ=255)
tACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATg > 2:2699141/1‑93 (MQ=255)
tACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATg > 1:394588/1‑93 (MQ=255)
|
TGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATG > NC_000913/2208415‑2208593
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGCA > NC_000913/2208413‑2208597
|
GATGGCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTGTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGAC < SRR4302543.1294862/94‑1 (MQ=60)
TGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCT < SRR4302543.2678099/94‑1 (MQ=60)
GCCTGGCAAATGTGGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTC < SRR4302543.5621353/94‑1 (MQ=60)
CCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCT > SRR4302543.65473/1‑94 (MQ=60)
CCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCT < SRR4302543.7910186/94‑1 (MQ=60)
CTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTT < SRR4302543.350916/94‑1 (MQ=60)
CTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTT > SRR4302543.1983050/1‑94 (MQ=60)
TGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTA < SRR4302543.2724120/94‑1 (MQ=60)
GGAAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAA < SRR4302543.1496955/94‑1 (MQ=60)
CAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATC < SRR4302543.521708/94‑1 (MQ=60)
CAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATC < SRR4302543.7399352/94‑1 (MQ=60)
AAATGTTGAGGGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCA < SRR4302543.7782389/94‑1 (MQ=60)
AAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCA < SRR4302543.5858512/94‑1 (MQ=60)
AATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGTGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAG < SRR4302543.7292799/94‑1 (MQ=60)
ATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGG > SRR4302543.3923484/1‑94 (MQ=60)
TGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGT < SRR4302543.7942315/94‑1 (MQ=60)
TGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCACCCCGCCTGCATACGACCTCTTAATCAGGT > SRR4302543.2148013/1‑94 (MQ=60)
TTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCCGCATACGACCTCTTAATCAGGTCG > SRR4302543.26000/1‑94 (MQ=60)
TGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGA < SRR4302543.5938690/94‑1 (MQ=60)
CGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAAC < SRR4302543.1297345/94‑1 (MQ=60)
GCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACT > SRR4302543.5934162/1‑94 (MQ=60)
GCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACT < SRR4302543.320576/94‑1 (MQ=60)
CCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTAT > SRR4302543.4395739/1‑94 (MQ=60)
CGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATT > SRR4302543.4646952/1‑94 (MQ=60)
CGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATT < SRR4302543.2073484/94‑1 (MQ=60)
GTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTT > SRR4302543.5915922/1‑94 (MQ=60)
GTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTT < SRR4302543.962895/94‑1 (MQ=60)
GTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTAGATAACTTATTT < SRR4302543.5323619/94‑1 (MQ=60)
GTGACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTT < SRR4302543.962894/94‑1 (MQ=60)
TTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTA < SRR4302543.3518164/94‑1 (MQ=60)
TACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTAT < SRR4302543.1444168/94‑1 (MQ=60)
GCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCT < SRR4302543.6284316/94‑1 (MQ=60)
GCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCT < SRR4302543.7190087/94‑1 (MQ=60)
GCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCT > SRR4302543.7613439/1‑94 (MQ=60)
CCAGCCGGGCATTGTGGGTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTG < SRR4302543.2073596/94‑1 (MQ=60)
CCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTG < SRR4302543.4703284/94‑1 (MQ=60)
AGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCC > SRR4302543.1221531/1‑94 (MQ=60)
GCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCG < SRR4302543.4713563/94‑1 (MQ=60)
CCGGGCATTGTGGCTTTGCGGGAATATTTACGCCCGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGCTCGATAACTTATTTATTCTGCCGG < SRR4302543.7810359/94‑1 (MQ=60)
CGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATAAGGTCGATAACTTATTTATTCTGCCGGC > SRR4302543.5708546/1‑94 (MQ=60)
gtgccttggggaTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATCCGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTC < SRR4302543.5226116/82‑1 (MQ=60)
GGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCG > SRR4302543.3865575/1‑94 (MQ=60)
CATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCT > SRR4302543.126299/1‑94 (MQ=60)
CATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCT > SRR4302543.1551572/1‑94 (MQ=60)
ATTGTGGCTTTGCGGGAATATTTCCGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTG < SRR4302543.2122104/94‑1 (MQ=60)
ATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTG > SRR4302543.3696061/1‑94 (MQ=60)
ATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTG > SRR4302543.1596933/1‑94 (MQ=60)
ATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTG > SRR4302543.5482900/1‑94 (MQ=60)
GGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGT > SRR4302543.104842/1‑94 (MQ=60)
GGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGT > SRR4302543.422831/1‑94 (MQ=60)
GCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTA < SRR4302543.6371508/94‑1 (MQ=60)
GCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTA > SRR4302543.1626241/1‑94 (MQ=60)
GCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTA > SRR4302543.1626240/1‑94 (MQ=60)
GCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTA < SRR4302543.3354179/94‑1 (MQ=60)
TTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATT < SRR4302543.1919493/94‑1 (MQ=60)
TTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATT < SRR4302543.313993/94‑1 (MQ=60)
TTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTT < SRR4302543.4232457/94‑1 (MQ=60)
TTGCGGGAATATTTACGCCAGCGTCCCCCCGCCCGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTT < SRR4302543.4021312/94‑1 (MQ=60)
TGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTC > SRR4302543.6119873/1‑94 (MQ=60)
GCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCG < SRR4302543.3458801/94‑1 (MQ=60)
GCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCG < SRR4302543.1648747/94‑1 (MQ=60)
CGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGC > SRR4302543.898620/1‑94 (MQ=60)
CGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGC > SRR4302543.3892919/1‑94 (MQ=60)
CGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGC > SRR4302543.5353434/1‑94 (MQ=60)
GGGAATATTTTCGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCT > SRR4302543.1463846/1‑94 (MQ=60)
GGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTC > SRR4302543.1944730/1‑94 (MQ=60)
GAATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCG < SRR4302543.1253940/94‑1 (MQ=60)
ATATTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTTAGTGTATTTCGCTCGGT > SRR4302543.7094668/1‑94 (MQ=60)
ATATTCACGCCCGCGCCCCCCCGCATGCATACGACCACTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGT < SRR4302543.3801971/94‑1 (MQ=60)
TTTACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGG > SRR4302543.668437/1‑94 (MQ=60)
TACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGA < SRR4302543.7499869/94‑1 (MQ=60)
ACGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGAC < SRR4302543.2359726/94‑1 (MQ=60)
CGCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACA > SRR4302543.5333007/1‑94 (MQ=60)
GCCAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAG > SRR4302543.1907427/1‑94 (MQ=60)
CAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCA < SRR4302543.4233919/94‑1 (MQ=60)
CAGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCA < SRR4302543.2045974/94‑1 (MQ=60)
AGCGTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAG < SRR4302543.4774553/94‑1 (MQ=60)
GTCCCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCG > SRR4302543.2011177/1‑94 (MQ=60)
CCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCA > SRR4302543.4440214/1‑94 (MQ=60)
CCCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCA > SRR4302543.5588233/1‑94 (MQ=60)
CCCCCGCCTGCATACGACCTATTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCA > SRR4302543.3953680/1‑94 (MQ=60)
CCCCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGATTGTATTTCTCTCGTTTGTGTCAGCAGCCGCCAG > SRR4302543.7100254/1‑94 (MQ=60)
CCGCCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGAC < SRR4302543.1662049/94‑1 (MQ=60)
CCTGCATACTACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTACCTGTGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCT < SRR4302543.4052605/94‑1 (MQ=60)
CCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCT > SRR4302543.4184527/1‑94 (MQ=60)
CCTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCG > SRR4302543.5872962/1‑94 (MQ=60)
CTGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTG < SRR4302543.5530581/94‑1 (MQ=60)
TGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGG > SRR4302543.2068943/1‑94 (MQ=60)
TGCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGG > SRR4302543.3792394/1‑94 (MQ=60)
GCATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGA > SRR4302543.5335579/1‑94 (MQ=60)
CATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGAT < SRR4302543.6767491/94‑1 (MQ=60)
CATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGAT < SRR4302543.868675/94‑1 (MQ=60)
CATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGAT > SRR4302543.1221581/1‑94 (MQ=60)
ATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTTCCGGTCGCTGATTGTATTTCGCTCGGTTGGGACAGCAACCGCCAGACTCTGGCTG > SRR4302543.2326023/1‑94 (MQ=60)
ATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATG > SRR4302543.3950660/1‑94 (MQ=60)
ATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATG > SRR4302543.398235/1‑94 (MQ=60)
ATACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATG > SRR4302543.7981936/1‑94 (MQ=60)
ACGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCG > SRR4302543.5543574/1‑94 (MQ=60)
CGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGC > SRR4302543.2558839/1‑94 (MQ=60)
CGACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGC > SRR4302543.5906265/1‑94 (MQ=60)
GACCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGCA > SRR4302543.7440417/1‑94 (MQ=60)
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GATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTACGCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCGCTCGGTTGGGACAGCAGCCGCCAGACGCTGGATGCGCA > NC_000913/2208413‑2208597
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
