breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
RA | 293 | A→G | intergenic (+38/‑44) | thrL → / → thrA | thr operon leader peptide/aspartokinase I |
RA | 1,999 | A→G | T555A (ACT→GCT) | thrA → | aspartokinase I |
RA | 7,646 | G→A | T105I (ACC→ATC) | yaaJ ← | inner membrane transport protein |
RA | 8,533 | C→T | A99V (GCG→GTG) | talB → | transaldolase B |
RA | 9,490 | T→C | V62A (GTG→GCG) | mog → | hypothetical protein |
RA | 17,618 | A→G | T44A (ACG→GCG) | nhaA → | pH dependent Na+/H antiporter |
RA | 18,885 | A→G | G57G (GGA→GGG) | nhaR → | NhaR |
RA | 27,903 | T→C | L204P (CTG→CCG) | yaaF → | hypothetical protein |
RA | 31,367 | A→G | N184S (AAC→AGC) | carB → | carbamoyl‑phosphate synthase large subunit |
RA | 32,257 | A→G | I481V (ATC→GTC) | carB → | carbamoyl‑phosphate synthase large subunit |
RA | 37,052 | A→G | V258A (GTA→GCA) | caiC ← | putative crotonobetain |
RA | 37,332 | A→G | C165R (TGC→CGC) | caiC ← | putative crotonobetain |
RA | 52,312 | G→A | A40V (GCG→GTG) | ksgA ← | S‑adenosylmethionine‑6‑N',N'‑adenosyl (rRNA) dimethyltransferase |
RA | 52,554 | A→G | L288P (CTG→CCG) | pdxA ← | PdxA |
RA | 52,760 | A→G | G219G (GGT→GGC) | pdxA ← | PdxA |
RA | 54,157 | C→T | P182P (CCG→CCA) | surA ← | survival protein |
RA | 55,791 | A→G | L440P (CTC→CCC) | imp ← | organic solvent tolerance |
RA | 61,392 | A→G | Y625H (TAT→CAT) | hepA ← | putative ATP‑dependent RNA helicase |
RA | 66,528 | T→C | Q8R (CAG→CGG) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase |
MC JC | 66,533 | 3540 bp→27 bp | [araD]–araB | [araD], araA, araB | |
RA | 70,289 | G→T | intergenic (‑241/‑98) | araB ← / → araC | L‑ribulokinase/transcriptional regulator for ara operon |
RA | 70,940 | A→G | Y185C (TAC→TGC) | araC → | transcriptional regulator for ara operon |
RA | 73,833 | A→G | I230T (ATC→ACC) | yabK ← | putative transport system permease protein |
RA | 76,142 | A→G | R386R (CGT→CGC) | yabN ← | putative transport protein |
RA | 78,003 | A→C | E128A (GAG→GCG) | yabM → | putative transport protein |
RA | 79,855 | A→G | V337A (GTG→GCG) | leuC ← | 3‑isopropylmalate isomerase (dehydratase) subunit |
RA | 80,603 | (T)5→6 | coding (262/1401 nt) | leuC ← | 3‑isopropylmalate isomerase (dehydratase) subunit |
RA | 83,384 | A→G | V49A (GTC→GCC) | leuA ← | 2‑isopropylmalate synthase |
RA | 88,227 | T→C | V67A (GTG→GCG) | fruR → | FruR |
RA | 88,471 | C→T | D148D (GAC→GAT) | fruR → | FruR |
RA | 89,802 | G→A | E57K (GAG→AAG) | yabB → | hypothetical protein |
RA | 89,815 | C→T | S61L (TCG→TTG) | yabB → | hypothetical protein |
RA | 92,447 | A→G | A345A (GCA→GCG) | ftsI → | penicillin‑binding protein 3 |
RA | 102,502 | A→G | A90A (GCA→GCG) | ddlB → | D‑alanine‑D‑alanine ligase B |
RA | 102,844 | A→G | Q204Q (CAA→CAG) | ddlB → | D‑alanine‑D‑alanine ligase B |
RA | 105,471 | A→G | Q56R (CAG→CGG) | ftsZ → | FtsZ |
RA | 112,238 | A→G | V121A (GTG→GCG) | yacF ← | hypothetical protein |
RA | 115,788 | A→G | C438R (TGC→CGC) | hofB ← | HofB |
RA | 115,968 | +G | coding (1132/1386 nt) | hofB ← | HofB |
RA | 119,626 | A→G | I116V (ATT→GTT) | ampE → | AmpE |
RA | 122,235 | T→C | R48R (CGT→CGC) | pdhR → | transcriptional regulator for pyruvate dehydrogenase complex |
RA | 126,160 | A→G | T156A (ACC→GCC) | aceF → | pyruvate dehydrogenase |
RA | 127,038 | G→A | A448A (GCG→GCA) | aceF → | pyruvate dehydrogenase |
RA | 127,232 | A→G | D513G (GAC→GGC) | aceF → | pyruvate dehydrogenase |
RA | 134,838 | A→G | W249R (TGG→CGG) | speD ← | S‑adenosylmethionine decarboxylase |
RA | 137,057 | G→A | intergenic (‑140/‑26) | yacC ← / → yacK | hypothetical protein/hypothetical protein |
RA | 139,413 | T→A | I605F (ATT→TTT) | gcd ← | glucose dehydrogenase |
RA | 140,736 | C→T | A164T (GCC→ACC) | gcd ← | glucose dehydrogenase |
RA | 143,615 | C→T | G279G (GGC→GGT) | yadG → | putative ATP‑binding component of a transport system |
RA | 144,977 | (A)7→8 | coding (401/441 nt) | yadI → | putative PTS enzyme IIA component |
RA | 145,352 | A→G | D91G (GAC→GGC) | yadE → | hypothetical protein |
RA | 148,229 | A→G | R189R (CGT→CGC) | panC ← | pantothenate synthetase |
RA | 158,711 | C→T | R128H (CGC→CAC) | pcnB ← | poly(A) polymerase I |
RA | 160,649 | A→G | intergenic (‑45/+133) | dksA ← / ← sfsA | DksA/putative regulator for maltose metabolism |
RA | 175,526 | C→T | G140G (GGC→GGT) | yadQ → | putative channel transporter |
RA | 177,386 | C→T | R80H (CGC→CAC) | yadS ← | hypothetical protein |
RA | 178,128 | A→G | I112T (ATT→ACT) | yadT ← | hypothetical protein |
RA | 187,838 | A→G | R271R (CGT→CGC) | glnD ← | protein PII |
RA | 194,316 | A→G | S266G (AGT→GGT) | yaeM → | putative ATP‑binding component of a transport system |
RA | 195,014 | A→G | I38V (ATT→GTT) | yaeS → | hypothetical protein |
RA | 196,376 | G→A | G198S (GGC→AGC) | cdsA → | CDP‑diglyceride synthetase |
RA | 196,710 | C→T | L55L (CTC→CTT) | yaeL → | hypothetical protein |
RA | 196,926 | A→G | V127V (GTA→GTG) | yaeL → | hypothetical protein |
RA | 198,418 | A→G | D164G (GAC→GGC) | yaeT → | hypothetical protein |
RA | 199,879 | A→G | N651S (AAC→AGC) | yaeT → | hypothetical protein |
RA | 200,585 | A→G | Q35R (CAG→CGG) | hlpA → | histone‑like protein |
RA | 200,658 | T→C | R59R (CGT→CGC) | hlpA → | histone‑like protein |
RA | 206,483 | A→G | Y453C (TAC→TGC) | dnaE → | DNA polymerase III alpha subunit |
RA | 216,444 | C→T | S187N (AGC→AAC) | yaeF ← | hypothetical protein |
RA | 229,560 | A→G | T132A (ACG→GCG) | yafB → | putative aldose reductase |
RA | 229,683 | A→G | I173V (ATC→GTC) | yafB → | putative aldose reductase |
RA | 230,556 | A→G | M109T (ATG→ACG) | yafC ← | putative transcriptional regulator LYSR‑type |
RA | 232,218 | A→G | D98G (GAC→GGC) | yafE → | putative biotin synthesis protein |
RA | 266,105 | A→G | intergenic (‑328/+303) | yafY ← / ← yafZ | hypothetical protein/hypothetical protein |
RA | 267,653 | +T | coding (532/864 nt) | ykfA ← | putative GTP‑binding protein |
RA | 271,281 | G→A | G76G (GGG→GGA) | b0257 → | putative transposase |
RA | 271,938 | A→G | intergenic (+459/‑148) | b0257 → / → ykfC | putative transposase/hypothetical protein |
RA | 277,917 | A→G | L41P (CTG→CCG) | afuC ← | AfuC |
RA | 283,649 | T→C | C409R (TGC→CGC) | yagF → | putative dehydratase |
RA | 284,871 | (G)6→7 | coding (253/1383 nt) | yagG → | putative permease |
RA | 285,775 | A→G | Y386C (TAC→TGC) | yagG → | putative permease |
RA | 288,283 | A→G | L35P (CTG→CCG) | yagI ← | putative regulator |
RA | 294,990 | T→C | H444R (CAC→CGC) | intF ← | putative phage integrase |
RA | 297,171 | A→G | R260R (CGT→CGC) | yagQ ← | hypothetical protein |
RA | 300,243 | +G | coding (869/957 nt) | yagS ← | hypothetical protein |
RA | 301,875 | A→G | intergenic (‑78/‑340) | yagT ← / → yagU | putative xanthine dehydrogenase/hypothetical protein |
RA | 302,564 | A→G | Y117C (TAT→TGT) | yagU → | hypothetical protein |
RA | 304,549 | T→C | E498G (GAA→GGA) | yagW ← | putative receptor |
RA | 306,666 | C→T | V631I (GTC→ATC) | yagX ← | hypothetical protein |
RA | 307,684 | T→C | L291L (TTA→TTG) | yagX ← | hypothetical protein |
RA | 308,649 | A→G | V201A (GTG→GCG) | yagY ← | hypothetical protein |
RA | 308,935 | G→A | R106C (CGC→TGC) | yagY ← | hypothetical protein |
RA | 321,039 | G→A | D70N (GAC→AAC) | ykgE → | putative dehydrogenase subunit |
RA | 328,027 | T→C | T184A (ACC→GCC) | betI ← | putative transcriptional repressor of bet genes |
RA | 329,174 | A→G | Y163C (TAC→TGC) | betT → | high‑affinity choline transport |
RA | 332,019 | T→C | V142A (GTG→GCG) | yahA → | hypothetical protein |
RA | 332,530 | T→C | P312P (CCT→CCC) | yahA → | hypothetical protein |
RA | 339,498 | T→C | V37A (GTG→GCG) | yahI → | putative kinase |
RA | 339,531 | T→C | V48A (GTG→GCG) | yahI → | putative kinase |
RA | 342,821 | C→T | F238F (TTC→TTT) | yahK → | putative oxidoreductase |
RA | 350,318 | A→G | Q361Q (CAA→CAG) | prpC → | putative citrate synthase; propionate metabolism? |
RA | 360,226 | G→A | P337P (CCG→CCA) | cynX → | CynX |
RA | 361,946 | A→G | L153P (CTG→CCG) | lacY ← | galactoside permease |
RA | 367,140 | C→T | A207T (GCC→ACC) | mhpR ← | transcriptional regulator for mhp operon |
RA | 367,441 | A→G | D106D (GAT→GAC) | mhpR ← | transcriptional regulator for mhp operon |
RA | 369,844 | A→G | H115R (CAC→CGC) | mhpB → | 2,3‑dihydroxyphenylpropionate 1,2‑dioxygenase |
RA | 374,060 | G→A | E323E (GAG→GAA) | mhpE → | 4‑hydroxy‑2‑ketovalerate aldolase |
RA | 374,295 | C→T | intergenic (+190/‑343) | mhpE → / → mhpT | 4‑hydroxy‑2‑ketovalerate aldolase/putative transport protein |
RA | 376,777 | A→G | N272N (AAT→AAC) | yaiM ← | putative esterase |
RA | 377,883 | T→C | T305A (ACT→GCT) | adhC ← | alcohol dehydrogenase class III |
RA | 379,246 | (G)10→9 | intergenic (‑120/+47) | yaiN ← / ← yaiO | putative alpha helix chain/hypothetical protein |
RA | 384,546 | A→G | T50A (ACC→GCC) | tauA → | TauA |
RA | 384,616 | A→G | D73G (GAC→GGC) | tauA → | TauA |
RA | 405,539 | A→G | intergenic (+93/‑90) | yaiI → / → aroL | hypothetical protein/shikimate kinase II |
RA | 409,218 | A→G | V9A (GTT→GCT) | yaiD ← | hypothetical protein |
RA | 410,583 | A→G | Y403H (TAT→CAT) | araJ ← | AraJ |
RA | 411,562 | T→C | A76A (GCA→GCG) | araJ ← | AraJ |
RA | 413,698 | T→C | H427R (CAC→CGC) | sbcC ← | ATP‑dependent dsDNA exonuclease |
RA | 416,945 | A→G | T194A (ACG→GCG) | phoB → | positive response regulator for pho regulon |
RA | 419,492 | T→C | R226R (CGT→CGC) | brnQ → | branched chain amino acid transport system II carrier protein |
RA | 419,767 | T→C | V318A (GTG→GCG) | brnQ → | branched chain amino acid transport system II carrier protein |
RA | 423,381 | T→C | V548A (GTG→GCG) | malZ → | maltodextrin glucosidase |
RA | 424,669 | C→T | G145G (GGC→GGT) | queA → | putative S‑adenosylmethionine |
RA | 428,380 | A→G | M504V (ATG→GTG) | secD → | SecD |
RA | 431,405 | C→T | intergenic (‑168/+131) | tsx ← / ← yajI | Tsx/hypothetical protein |
RA | 432,925 | C→T | P83S (CCG→TCG) | ribD → | pyrimidine deaminase |
RA | 435,927 | A→G | T39A (ACG→GCG) | pgpA → | phosphatidylglycerophosphatase |
RA | 436,659 | T→C | E258G (GAG→GGG) | yajO ← | putative NAD(P)H‑dependent xylose reductase |
RA | 439,695 | A→G | Y211H (TAT→CAT) | ispA ← | geranyltranstransferase |
RA | 442,390 | C→T | G159D (GGT→GAT) | thiJ ← | 4‑methyl‑5(beta‑hydroxyethyl)‑thiazole monophosphate synthesis |
RA | 442,916 | A→G | V275A (GTA→GCA) | apbA ← | ApbA |
RA | 446,355 | T→C | N192S (AAC→AGC) | cyoE ← | protoheme IX farnesyltransferase |
RA | 446,850 | A→G | L27P (CTG→CCG) | cyoE ← | protoheme IX farnesyltransferase |
RA | 450,780 | T→C | T19A (ACT→GCT) | cyoA ← | cytochrome o ubiquinol oxidase subunit II |
RA | 451,346 | A→G | V475A (GTG→GCG) | ampG ← | AmpG |
RA | 451,404 | A→G | F456L (TTC→CTC) | ampG ← | AmpG |
RA | 459,477 | T→C | Y456H (TAC→CAC) | lon → | ATP‑dependent protease La |
RA | 476,985 | A→G | V288A (GTG→GCG) | ylaB ← | hypothetical protein |
RA | 477,096 | A→G | L251P (CTC→CCC) | ylaB ← | hypothetical protein |
RA | 477,192 | A→G | L219P (CTG→CCG) | ylaB ← | hypothetical protein |
RA | 477,992 | A→G | intergenic (‑145/+13) | ylaB ← / ← ylaC | hypothetical protein/hypothetical protein |
RA | 480,099 | A→G | intergenic (‑167/+379) | ybaJ ← / ← acrB | hypothetical protein/acridine efflux pump |
RA | 481,041 | A→G | S863P (TCC→CCC) | acrB ← | acridine efflux pump |
RA | 482,211 | T→C | T473A (ACC→GCC) | acrB ← | acridine efflux pump |
RA | 485,069 | (G)5→6 | coding (85/648 nt) | acrR → | acrAB operon repressor |
RA | 486,435 | A→G | T226A (ACC→GCC) | aefA → | putative alpha helix protein |
RA | 488,917 | A→G | E1053G (GAG→GGG) | aefA → | putative alpha helix protein |
RA | 493,203 | T→C | F630L (TTC→CTC) | dnaX → | DNA polymerase III tau and gamma subunits |
RA | 493,536 | C→T | D79D (GAC→GAT) | ybaB → | hypothetical protein |
RA | 495,182 | T→C | I280T (ATC→ACC) | htpG → | chaperone Hsp90 |
RA | 500,613 | A→G | E422G (GAG→GGG) | gsk → | inosine‑guanosine kinase |
RA | 502,019 | T→C | Q148Q (CAA→CAG) | ybaL ← | putative transport protein |
RA | 502,653 | C→T | intergenic (‑191/+47) | ybaL ← / ← fsr | putative transport protein/fosmidomycin resistance protein |
RA | 504,799 | A→G | Y221C (TAC→TGC) | ushA → | UDP‑sugar hydrolase (5'‑nucleotidase) |
RA | 526,302 | (G)6→7 | coding (3818/4281 nt) | rhsD → | RhsD |
RA | 526,519 | T→C | C1345C (TGT→TGC) | rhsD → | RhsD |
RA | 528,636 | T→C | intergenic (+282/+233) | b0501 → / ← b0502 | hypothetical protein/hypothetical protein |
RA | 531,453 | T→C | intergenic (‑8/‑222) | ybbS ← / → ybbT | putative transcriptional regulator LYSR‑type/hypothetical protein |
RA | 539,651 | A→G | L427L (TTA→TTG) | ybbX → | putative hydrolase |
RA | 541,457 | (G)5→6 | coding (346/1146 nt) | ybbZ → | hypothetical protein |
RA | 541,786 | +G | coding (675/1146 nt) | ybbZ → | hypothetical protein |
RA | 547,694 | A→G | E38E (GAA→GAG) | b4507 → | hypothetical protein |
RA | 547,835 | +G | coding (255/261 nt) | b4507 → | hypothetical protein |
RA | 556,959 | T→C | A2A (GCA→GCG) | folD ← | 5,10‑methylene‑tetrahydrofolate dehydrogenase |
RA | 564,469 | G→A | R245C (CGC→TGC) | intD ← | prophage DLP12 integrase |
RA | 568,823 | A→G | G233G (GGA→GGG) | ybcK → | hypothetical protein |
RA | 571,064 | T→C | F130L (TTC→CTC) | ybcM → | putative ARAC‑type regulatory protein |
RA | 571,696 | T→C | L3P (CTC→CCC) | ybcN → | hypothetical protein |
RA | 578,967 | T→C | intergenic (‑108/‑136) | ybcV ← / → ybcW | putative envelope protein/hypothetical protein |
RA | 591,166 | A→G | G412G (GGT→GGC) | nfrB ← | NfrB |
RA | 592,232 | C→T | R57Q (CGA→CAA) | nfrB ← | NfrB |
RA | 595,469 | A→G | Q216R (CAG→CGG) | ylcB → | putative resistance protein |
RA | 613,409 | A→G | A10A (GCA→GCG) | entF → | ATP‑dependent serine activating enzyme |
RA | 619,925 | T→C | T163A (ACC→GCC) | fepG ← | FepG |
RA | 628,816 | A→G | V98V (GTA→GTG) | ybdB → | hypothetical protein |
RA | 629,933 | T→C | W273R (TGG→CGG) | cstA → | carbon starvation protein |
RA | 631,241 | A→G | intergenic (+19/‑164) | cstA → / → ybdD | carbon starvation protein/hypothetical protein |
RA | 631,938 | C→T | A255T (GCA→ACA) | ybdH ← | putative oxidoreductase |
RA | 632,588 | A→G | V38A (GTG→GCG) | ybdH ← | putative oxidoreductase |
RA | 641,051 | T→C | M14V (ATG→GTG) | ybdQ ← | hypothetical protein |
RA | 645,034 | A→G | V257A (GTG→GCG) | ybdS ← | YbdS |
RA | 647,331 | G→A | D488D (GAC→GAT) | citF ← | citrate lyase alpha chain |
RA | 648,378 | T→C | E139E (GAA→GAG) | citF ← | citrate lyase alpha chain |
RA | 651,666 | T→C | V70A (GTC→GCC) | citA → | putative sensor‑type protein |
RA | 652,748 | A→G | T431A (ACC→GCC) | citA → | putative sensor‑type protein |
RA | 653,656 | G→A | R191H (CGC→CAC) | citB → | CitB |
RA | 654,812 | G→A | A127V (GCC→GTC) | dcuC ← | DcuC |
RA | 656,969 | A→G | W65R (TGG→CGG) | crcB ← | hypothetical protein |
RA | 657,246 | A→G | intergenic (‑85/‑8) | crcB ← / → ybeH | hypothetical protein/hypothetical protein |
RA | 658,840 | A→G | R200R (CGT→CGC) | lipA ← | lipoate synthesis |
RA | 667,973 | C→T | R96H (CGC→CAC) | ybeB ← | hypothetical protein |
RA | 671,943 | T→C | A688A (GCA→GCG) | leuS ← | leucine tRNA synthetase |
RA | 672,914 | C→T | G365S (GGC→AGC) | leuS ← | leucine tRNA synthetase |
RA | 673,104 | T→C | K301K (AAA→AAG) | leuS ← | leucine tRNA synthetase |
RA | 675,063 | A→G | A236A (GCT→GCC) | ybeQ ← | hypothetical protein |
RA | 689,228 | T→C | S293G (AGC→GGC) | lnt ← | apolipoprotein N‑acyltransferase |
RA | 700,706 | T→C | I38V (ATT→GTT) | nagC ← | NagC |
RA | 700,788 | A→G | G10G (GGT→GGC) | nagC ← | NagC |
RA | 704,236 | T→C | L357S (TTG→TCG) | nagE → | PTS system, N‑acetylglucosamine‑specific enzyme IIABC |
RA | 707,634 | A→G | A26A (GCA→GCG) | ybfM → | hypothetical protein |
RA | 709,880 | T→C | intergenic (‑11/+278) | fur ← / ← fldA | Fur/flavodoxin 1 |
RA | 715,277 | A→G | Y86H (TAC→CAC) | ybfG ← | hypothetical protein |
RA | 722,751 | (T)8→7 | coding (887/2685 nt) | kdpD ← | KdpD |
RA | 723,954 | G→A | G83G (GGC→GGT) | kdpC ← | KdpC |
RA | 728,069 | T→C | intergenic (‑25/‑288) | kdpF ← / → ybfA | KdpF/hypothetical protein |
RA | 735,021 | C→T | A50V (GCC→GTC) | ybfC → | hypothetical protein |
RA | 743,274 | A→G | E153E (GAA→GAG) | ybgJ → | putative carboxylase |
RA | 744,690 | T→C | R101R (CGT→CGC) | ybgL → | putative lactam utilization protein |
RA | 747,952 | A→G | V85A (GTA→GCA) | ybgO ← | hypothetical protein |
RA | 752,007 | T→C | G4G (GGA→GGG) | ybgD ← | putative fimbrial‑like protein |
RA | 755,604 | A→G | T159A (ACC→GCC) | sdhA → | succinate dehydrogenase flavoprotein subunit |
RA | 755,915 | T→C | G262G (GGT→GGC) | sdhA → | succinate dehydrogenase flavoprotein subunit |
RA | 758,405 | C→T | A159A (GCC→GCT) | sucA → | 2‑oxoglutarate dehydrogenase |
RA | 763,246 | C→T | A337V (GCA→GTA) | sucC → | succinyl‑CoA synthetase beta subunit |
RA | 766,372 | C→T | A389V (GCG→GTG) | hrsA → | PTS system fructose specific IIABC component |
RA | 772,731 | A→G | Y156C (TAC→TGC) | cydB → | cytochrome d terminal oxidase polypeptide subunit II |
RA | 775,372 | G→A | A101T (GCC→ACC) | tolR → | TolF |
RA | 780,533 | A→G | intergenic (+88/‑59) | lysY → / → lysZ | tRNA‑Lys/tRNA‑Lys |
RA | 780,918 | T→C | intergenic (+43/‑390) | lysQ → / → nadA | tRNA‑Lys/quinolinate synthetase A protein |
RA | 800,958 | A→G | Q326R (CAG→CGG) | ybhH → | hypothetical protein |
RA | 804,639 | C→T | G646G (GGC→GGT) | ybhJ → | hypothetical protein |
RA | 810,837 | T→C | A31A (GCT→GCC) | bioC → | BioC |
RA | 812,754 | T→C | S2S (AGT→AGC) | uvrB → | DNA repair; excision nuclease subunit B |
RA | 817,654 | +G | coding (377/513 nt) | moaB → | molybdopterin biosynthesis protein B |
RA | 823,777 | (A)5→6 | intergenic (‑57/‑76) | ybhP ← / → ybhQ | hypothetical protein/hypothetical protein |
RA | 827,018 | C→T | S396N (AGT→AAT) | ybhF ← | YbhF |
RA | 832,142 | A→G | V11A (GTC→GCC) | ybiA ← | hypothetical protein |
RA | 839,124 | T→C | N544S (AAC→AGC) | b0805 ← | putative outer membrane receptor for iron transport |
RA | 844,923 | T→G | intergenic (‑220/+41) | ybiO ← / ← glnQ | putative transport protein/ATP‑binding component of glutamine high‑affinity transport system |
RA | 857,539 | T→C | D249G (GAC→GGC) | ybiU ← | hypothetical protein |
RA | 860,412 | C→T | G473E (GGG→GAG) | ybiW ← | putative formate acetyltransferase |
RA | 861,873 | C→T | A297T (GCC→ACC) | ybiY ← | putative pyruvate formate‑lyase activating enzyme 2 |
RA | 862,272 | T→C | T164A (ACT→GCT) | ybiY ← | putative pyruvate formate‑lyase activating enzyme 2 |
RA | 865,377 | C→T | G71R (GGG→AGG) | moeA ← | MoeA |
RA | 866,644 | A→G | N285S (AAT→AGT) | ybiK → | putative asparaginase |
RA | 867,645 | (C)8→7 | coding (870/1839 nt) | b0829 → | hypothetical protein |
RA | 871,382 | Δ1 bp | coding (270/912 nt) | b0832 → | putative transport system permease protein |
RA | 873,303 | C→T | L368F (CTC→TTC) | b0833 → | hypothetical protein |
RA | 881,712 | C→T | A82A (GCG→GCA) | deoR ← | DeoR |
RA | 882,401 | A→G | S71P (TCC→CCC) | ybjG ← | hypothetical protein |
RA | 888,315 | C→T | G243D (GGC→GAC) | b0847 ← | putative transport protein |
RA | 888,802 | (A)7→6 | coding (241/1686 nt) | b0847 ← | putative transport protein |
RA | 891,325 | T→C | S46P (TCT→CCT) | rimK → | ribosomal protein S6 modification protein |
RA | 891,504 | A→G | Q105Q (CAA→CAG) | rimK → | ribosomal protein S6 modification protein |
RA | 903,232 | Δ1 bp | coding (459/516 nt) | ybjP ← | hypothetical protein |
RA | 903,254 | A→G | V146A (GTC→GCC) | ybjP ← | hypothetical protein |
RA | 905,051 | T→C | E321G (GAG→GGG) | b0868 ← | putative nucleotide di‑P‑sugar epimerase or dehydratase |
RA | 907,798 | A→G | Y240Y (TAT→TAC) | ybjU ← | putative arylsulfatase |
RA | 908,737 | T→C | Q512Q (CAA→CAG) | poxB ← | pyruvate oxidase |
RA | 908,793 | A→G | C494R (TGC→CGC) | poxB ← | pyruvate oxidase |
RA | 909,105 | A→G | Y390H (TAT→CAT) | poxB ← | pyruvate oxidase |
RA | 916,439 | T→C | D248D (GAT→GAC) | ybjD → | hypothetical protein |
RA | 922,398 | T→C | V88A (GTG→GCG) | yljA → | hypothetical protein |
RA | 926,314 | A→G | R114R (CGT→CGC) | aat ← | leucyl, phenylalanyl‑tRNA‑protein transferase |
RA | 932,454 | A→G | Q3R (CAG→CGG) | ftsK → | cell division protein |
RA | 933,473 | A→G | T343A (ACG→GCG) | ftsK → | cell division protein |
RA | 934,839 | T→C | V798A (GTT→GCT) | ftsK → | cell division protein |
RA | 937,294 | A→G | A26A (GCA→GCG) | ycaJ → | putative polynucleotide enzyme |
RA | 940,394 | C→T | C71C (TGC→TGT) | dmsA → | anaerobic dimethyl sulfoxide reductase subunit A |
RA | 945,097 | T→C | S2P (TCC→CCC) | ycaD → | putative transport |
RA | 950,532 | T→C | Q749R (CAG→CGG) | pflB ← | formate acetyltransferase 1 |
RA | 952,160 | A→G | A206A (GCT→GCC) | pflB ← | formate acetyltransferase 1 |
RA | 955,785 | +A | coding (71/1761 nt) | ycaO ← | hypothetical protein |
RA | 959,388 | (T)8→7 | intergenic (+70/‑75) | aroA → / → ycaL | 5‑enolpyruvylshikimate‑3‑phosphate synthetase/putative heat shock protein |
RA | 963,286 | A→G | H79R (CAC→CGC) | himD → | integration host factor beta subunit |
RA | 964,839 | G→A | A433T (GCT→ACT) | ycaI → | hypothetical protein |
RA | 968,384 | T→C | S266P (TCT→CCT) | ycaH → | hypothetical protein |
RA | 969,798 | T→C | L396P (CTC→CCC) | ycaQ → | hypothetical protein |
RA | 974,364 | A→G | I275V (ATT→GTT) | mukF → | MukF |
RA | 979,388 | T→C | R1280R (CGT→CGC) | mukB → | MukB |
RA | 985,663 | A→G | G181G (GGT→GGC) | ompF ← | outer membrane protein 1a |
RA | 987,323 | C→T | A296T (GCC→ACC) | asnS ← | asparagine tRNA synthetase |
RA | 988,555 | A→G | L342P (CTG→CCG) | pncB ← | nicotinate phosphoribosyltransferase |
RA | 991,040 | A→G | N399S (AAC→AGC) | pepN → | aminopeptidase N |
RA | 996,175 | A→G | G187G (GGT→GGC) | ycbP ← | hypothetical protein |
RA | 996,684 | A→G | S18P (TCC→CCC) | ycbP ← | hypothetical protein |
RA | 998,433 | A→G | intergenic (+19/‑6) | ycbR → / → ycbS | putative chaperone/putative outer membrane protein |
RA | 999,571 | A→G | Q378R (CAG→CGG) | ycbS → | putative outer membrane protein |
RA | 1,001,447 | (G)7→8 | coding (418/1071 nt) | b0941 → | FimH‑like protein |
RA | 1,003,385 | Δ1 bp | coding (186/681 nt) | ycbF → | putative chaperone |
RA | 1,009,201 | T→C | S5S (AGT→AGC) | uup → | putative ATP‑binding component of a transport system |
RA | 1,015,816 | T→C | G569G (GGA→GGG) | b0955 ← | putative ATP‑dependent protease |
RA | 1,017,437 | T→C | D29G (GAC→GGC) | b0955 ← | putative ATP‑dependent protease |
RA | 1,019,162 | A→G | Y39H (TAC→CAC) | ompA ← | outer membrane protein 3a |
RA | 1,021,376 | A→G | D580D (GAT→GAC) | b0960 ← | hypothetical protein |
RA | 1,029,120 | +C | coding (73/1191 nt) | b0967 ← | putative oxidoreductase |
RA | 1,035,719 | C→T | T48M (ACG→ATG) | hyaE → | HyaE |
RA | 1,035,840 | C→T | G88G (GGC→GGT) | hyaE → | HyaE |
RA | 1,040,218 | G→A | A127T (GCA→ACA) | appA → | phosphoanhydride phosphorylase |
RA | 1,048,676 | A→G | S104P (TCC→CCC) | ymcD ← | hypothetical protein |
RA | 1,050,477 | A→G | intergenic (‑79/‑207) | cspH ← / → cspG | cold shock‑like protein/CspG |
RA | 1,053,401 | T→C | A657A (GCA→GCG) | torS ← | TorS |
RA | 1,053,515 | T→C | G619G (GGA→GGG) | torS ← | TorS |
RA | 1,056,041 | A→G | E186E (GAA→GAG) | torT → | TorT |
RA | 1,056,882 | T→C | Y99C (TAC→TGC) | torR ← | TorR |
RA | 1,059,505 | T→C | W343R (TGG→CGG) | torA → | trimethylamine N‑oxide reductase subunit |
RA | 1,060,946 | A→G | E823G (GAG→GGG) | torA → | trimethylamine N‑oxide reductase subunit |
RA | 1,061,601 | T→C | C194R (TGC→CGC) | torD → | TorD |
RA | 1,067,441 | (A)6→5 | coding (138/174 nt) | b4516 → | hypothetical protein |
RA | 1,071,190 | T→C | T65A (ACG→GCG) | b1010 ← | hypothetical protein |
RA | 1,086,713 | A→G | R119R (CGT→CGC) | ycdQ ← | hypothetical protein |
RA | 1,087,656 | A→G | D475D (GAT→GAC) | ycdR ← | hypothetical protein |
RA | 1,088,752 | A→G | V110A (GTG→GCG) | ycdR ← | hypothetical protein |
RA | 1,091,304 | T→C | D70G (GAC→GGC) | ycdS ← | putative outer membrane protein |
RA | 1,096,622 | (G)7→8 | intergenic (+570/+166) | ycdU → / ← serX | hypothetical protein/tRNA‑Ser |
RA | 1,096,803 | (G)7→8 | noncoding (73/88 nt) | serX ← | tRNA‑Ser |
RA | 1,096,810 | A→G | noncoding (66/88 nt) | serX ← | tRNA‑Ser |
RA | 1,102,451 | A→G | intergenic (‑32/+435) | csgD ← / ← b4518 | CsgD/hypothetical protein |
RA | 1,107,299 | A→G | V289A (GTG→GCG) | ymdD ← | hypothetical protein |
RA | 1,116,479 | A→G | A150A (GCA→GCG) | yceA → | hypothetical protein |
RA | 1,117,607 | A→G | G31G (GGT→GGC) | yceI ← | hypothetical protein |
RA | 1,122,580 | (A)6→7 | intergenic (‑84/+50) | yceB ← / ← grxB | hypothetical protein/glutaredoxin 2 |
RA | 1,124,847 | T→C | R21R (CGT→CGC) | rimJ → | acetylation of N‑terminal alanine of 30S ribosomal subunit protein S5 |
RA | 1,125,352 | T→C | W190R (TGG→CGG) | rimJ → | acetylation of N‑terminal alanine of 30S ribosomal subunit protein S5 |
RA | 1,126,600 | A→G | D191G (GAC→GGC) | mviM → | putative virulence factor |
RA | 1,127,778 | C→T | G239G (GGC→GGT) | mviN → | putative virulence factor |
RA | 1,132,875 | T→C | L360P (CTG→CCG) | flgE → | hook protein |
RA | 1,136,396 | A→G | G301G (GGA→GGG) | flgI → | FlgI |
RA | 1,137,414 | A→G | D274G (GAC→GGC) | flgJ → | FlgJ |
RA | 1,138,203 | A→G | Q201Q (CAA→CAG) | flgK → | hook‑filament junction protein 1 |
RA | 1,140,841 | A→G | V917A (GTG→GCG) | rne ← | RNase E |
RA | 1,144,672 | A→G | K170K (AAA→AAG) | yceC → | hypothetical protein |
RA | 1,145,923 | T→C | intergenic (‑66/‑94) | yceF ← / → yceD | hypothetical protein/hypothetical protein |
RA | 1,146,011 | C→T | intergenic (‑154/‑6) | yceF ← / → yceD | hypothetical protein/hypothetical protein |
RA | 1,147,973 | T→C | intergenic (+59/‑9) | plsX → / → fabH | PlsX/3‑oxoacyl‑[acyl‑carrier‑protein] synthase III |
RA | 1,150,932 | A→G | D32G (GAC→GGC) | acpP → | acyl carrier protein |
RA | 1,167,731 | T→C | T109A (ACC→GCC) | ycfQ ← | hypothetical protein |
RA | 1,168,777 | A→G | L274P (CTG→CCG) | ycfS ← | hypothetical protein |
RA | 1,170,138 | A→G | I1017T (ATC→ACC) | mfd ← | transcription‑repair coupling mutation frequency decline |
RA | 1,173,983 | C→T | G136R (GGG→AGG) | ycfT ← | hypothetical protein |
RA | 1,175,527 | A→G | K293R (AAG→AGG) | ycfU → | hypothetical protein |
RA | 1,178,755 | C→T | R5W (CGG→TGG) | cobB → | putative nicotinic acid mononucleotide:5,6‑dimethylbenzimidazole (DMB) phosphoribosyltransferase |
RA | 1,184,484 | A→G | F112L (TTT→CTT) | potA ← | ATP‑binding component of spermidine/putrescine transport |
RA | 1,184,489 | A→G | V110A (GTG→GCG) | potA ← | ATP‑binding component of spermidine/putrescine transport |
RA | 1,185,646 | A→G | T194A (ACT→GCT) | pepT → | putative peptidase T |
RA | 1,186,123 | C→T | R353C (CGC→TGC) | pepT → | putative peptidase T |
RA | 1,202,768 | A→G | D97G (GAT→GGT) | ymfL → | hypothetical protein |
RA | 1,203,682 | A→G | D97G (GAT→GGT) | ymfN → | hypothetical protein |
RA | 1,204,520 | G→A | A376A (GCG→GCA) | ymfN → | hypothetical protein |
RA | 1,206,988 | A→G | T89A (ACT→GCT) | ycfK → | hypothetical protein |
RA | 1,209,664 | (G)5→6 | coding (96/834 nt) | mcrA → | McrA |
RA | 1,212,032 | Δ1 bp | coding (299/405 nt) | ycgX ← | hypothetical protein |
RA | 1,216,420 | A→G | intergenic (+201/‑89) | ymgC → / → b1168 | hypothetical protein/putative proteases |
RA | 1,220,610 | A→G | E61G (GAG→GGG) | b1170 → | putative part of putative ATP‑binding component of a transport system |
RA | 1,222,734 | T→C | intergenic (‑583/‑184) | b1172 ← / → b1173 | hypothetical protein/hypothetical protein |
RA | 1,226,344 | C→T | A118T (GCC→ACC) | ycgK ← | hypothetical protein |
RA | 1,230,143 | T→C | Y52H (TAC→CAC) | umuD → | UmuD |
RA | 1,230,972 | A→G | G188G (GGA→GGG) | umuC → | UmuC |
RA | 1,233,892 | A→G | S17P (TCC→CCC) | nhaB ← | Na+/H+ antiporter, pH independent |
RA | 1,235,760 | A→G | Y235Y (TAT→TAC) | ycgB ← | putative sporulation protein |
RA | 1,237,781 | A→G | T330A (ACG→GCG) | dadA → | D‑amino acid dehydrogenase subunit |
RA | 1,237,963 | C→T | S390S (TCC→TCT) | dadA → | D‑amino acid dehydrogenase subunit |
RA | 1,240,051 | T→C | E373G (GAG→GGG) | b1191 ← | hypothetical protein |
RA | 1,243,418 | T→C | V111V (GTA→GTG) | ycgR ← | hypothetical protein |
RA | 1,247,747 | T→C | T198T (ACA→ACG) | ycgC ← | putative PTS system enzyme I/IIA/HPr |
RA | 1,249,670 | A→G | V131A (GTC→GCC) | b1200 ← | putative dihydroxyacetone kinase |
RA | 1,261,945 | A→G | R52R (CGT→CGC) | ychB ← | hypothetical protein |
RA | 1,263,021 | G→A | D29N (GAT→AAT) | hemA → | HemA |
RA | 1,273,390 | T→C | R81R (CGT→CGC) | ychP → | putative factor |
RA | 1,275,100 | A→G | V581A (GTC→GCC) | narX ← | NarX |
RA | 1,276,302 | T→C | Q180Q (CAA→CAG) | narX ← | NarX |
RA | 1,279,780 | T→C | W232R (TGG→CGG) | narG → | nitrate reductase 1 alpha subunit |
RA | 1,280,531 | A→G | Y482C (TAC→TGC) | narG → | nitrate reductase 1 alpha subunit |
RA | 1,289,543 | T→C | F27L (TTT→CTT) | hnr → | Hnr |
RA | 1,291,463 | A→G | K262E (AAG→GAG) | galU → | glucose‑1‑phosphate uridylyltransferase |
RA | 1,291,867 | A→G | R93R (CGT→CGC) | hns ← | DNA‑binding protein HLP‑II |
RA | 1,293,354 | A→G | H202R (CAT→CGT) | tdk → | thymidine kinase |
RA | 1,293,679 | A→G | P187P (CCT→CCC) | ychG ← | hypothetical protein |
RA | 1,301,617 | T→C | V232A (GTG→GCG) | oppB → | oligopeptide transport permease protein |
RA | 1,302,327 | T→C | V157A (GTG→GCG) | oppC → | OppC |
RA | 1,302,782 | A→G | N2S (AAC→AGC) | oppD → | OppD |
RA | 1,303,961 | A→G | E58E (GAA→GAG) | oppF → | OppF |
RA | 1,310,470 | A→G | F149L (TTT→CTT) | yciB ← | hypothetical protein |
RA | 1,311,690 | A→G | intergenic (‑3/‑354) | yciC ← / → yciD | hypothetical protein/putative outer membrane protein |
RA | 1,316,594 | (C)5→4 | coding (1219/1362 nt) | trpC ← | N‑(5‑phosphoribosyl)anthranilate isomerase and indole‑3‑glycerolphosphate synthetase |
RA | 1,316,595 | C→T | A406A (GCG→GCA) | trpC ← | N‑(5‑phosphoribosyl)anthranilate isomerase and indole‑3‑glycerolphosphate synthetase |
RA | 1,329,911 | T→C | P280P (CCT→CCC) | topA → | DNA topoisomerase type I omega protein |
RA | 1,330,421 | A→G | L450L (TTA→TTG) | topA → | DNA topoisomerase type I omega protein |
RA | 1,335,418 | A→G | S522G (AGC→GGC) | acnA → | aconitate hydrase 1 |
RA | 1,338,553 | A→G | H96R (CAC→CGC) | yciS → | hypothetical protein |
RA | 1,339,624 | A→G | K348R (AAG→AGG) | yciM → | putative heat shock protein |
RA | 1,341,199 | T→C | S52G (AGT→GGT) | osmB ← | osmotically inducible lipoprotein |
RA | 1,343,823 | C→T | G315E (GGG→GAG) | yciR ← | hypothetical protein |
RA | 1,343,880 | A→G | V296A (GTG→GCG) | yciR ← | hypothetical protein |
RA | 1,344,524 | T→C | G81G (GGA→GGG) | yciR ← | hypothetical protein |
RA | 1,347,243 | T→G | T323P (ACC→CCC) | yciW ← | putative oxidoreductase |
RA | 1,347,664 | A→G | T182T (ACT→ACC) | yciW ← | putative oxidoreductase |
RA | 1,348,004 | A→G | V69A (GTG→GCG) | yciW ← | putative oxidoreductase |
RA | 1,351,962 | C→T | R194H (CGT→CAT) | sapC ← | SapC |
RA | 1,354,373 | G→A | G254G (GGC→GGT) | sapA ← | SapA |
RA | 1,356,924 | C→T | P96P (CCG→CCA) | ycjJ ← | putative amino acid/amine transport protein |
RA | 1,358,926 | T→C | T3A (ACC→GCC) | b1297 ← | putative glutamine synthetase |
RA | 1,359,603 | G→A | A150T (GCA→ACA) | ycjL → | putative amidotransferase subunit |
RA | 1,360,184 | G→A | D84N (GAC→AAC) | ycjC → | hypothetical protein |
RA | 1,368,365 | (A)6→5 | coding (126/1680 nt) | ycjM → | putative polysaccharide hydrolase |
RA | 1,368,813 | A→G | T192A (ACC→GCC) | ycjM → | putative polysaccharide hydrolase |
RA | 1,372,616 | T→C | I168T (ATC→ACC) | ycjP → | putative transport system permease protein |
RA | 1,376,771 | C→T | G288G (GGC→GGT) | ycjT → | hypothetical protein |
RA | 1,385,769 | T→C | N342N (AAT→AAC) | tyrR → | TyrR |
RA | 1,389,803 | A→G | P29P (CCT→CCC) | b1327 ← | hypothetical protein |
RA | 1,390,553 | T→C | V180A (GTT→GCT) | ycjZ → | putative transcriptional regulator LYSR‑type |
RA | 1,400,388 | A→G | S298P (TCC→CCC) | b1337 ← | hypothetical protein |
RA | 1,403,088 | T→C | S108S (AGT→AGC) | ydaK → | putative transcriptional regulator LYSR‑type |
RA | 1,405,126 | T→C | M252V (ATG→GTG) | b1341 ← | hypothetical protein |
RA | 1,419,658 | C→T | P172P (CCC→CCT) | ydaU → | hypothetical protein |
RA | 1,420,362 | C→T | A119V (GCA→GTA) | b1360 → | putative DNA replication factor |
RA | 1,427,019 | A→G | intergenic (+11/‑48) | b1371 → / → b1372 | hypothetical protein/putative membrane protein |
RA | 1,433,368 | T→C | E92E (GAA→GAG) | ynaF ← | putative filament protein |
RA | 1,434,657 | T→C | E87E (GAA→GAG) | b1377 ← | putative outer membrane protein |
RA | 1,439,984 | T→C | H295R (CAC→CGC) | ldhA ← | fermentative D‑lactate dehydrogenase, NAD‑dependent |
RA | 1,445,885 | A→G | I115V (ATT→GTT) | feaB → | phenylacetaldehyde dehydrogenase |
RA | 1,446,600 | A→G | H353R (CAC→CGC) | feaB → | phenylacetaldehyde dehydrogenase |
RA | 1,448,298 | T→C | D359G (GAT→GGT) | tynA ← | copper amine oxidase |
RA | 1,449,800 | T→C | T623A (ACC→GCC) | maoC ← | putative aldehyde dehydrogenase |
RA | 1,456,531 | A→G | M82V (ATG→GTG) | b1394 → | hypothetical protein |
RA | 1,458,704 | C→T | S70S (AGC→AGT) | b1396 → | hypothetical protein |
RA | 1,458,752 | T→C | R86R (CGT→CGC) | b1396 → | hypothetical protein |
RA | 1,461,082 | C→T | P312S (CCA→TCA) | b1398 → | hypothetical protein |
RA | 1,461,874 | T→C | P104P (CCT→CCC) | b1399 → | hypothetical protein |
RA | 1,464,084 | T→C | intergenic (+999/+1861) | b1400 → / ← yi222 | putative transferase/hypothetical protein |
RA | 1,464,530 | C→T | intergenic (+1445/+1415) | b1400 → / ← yi222 | putative transferase/hypothetical protein |
RA | 1,472,339 | (C)6→7 | coding (95/861 nt) | ydbC → | putative dehydrogenase |
RA | 1,472,351 | A→G | H36R (CAC→CGC) | ydbC → | putative dehydrogenase |
RA | 1,473,746 | A→G | K195K (AAA→AAG) | ydbD → | hypothetical protein |
RA | 1,476,818 | C→T | S190F (TCC→TTC) | b1409 → | putative phosphatidate cytidiltransferase |
RA | 1,476,839 | T→C | V197A (GTC→GCC) | b1409 → | putative phosphatidate cytidiltransferase |
RA | 1,478,094 | A→G | G311G (GGA→GGG) | b1410 → | hypothetical protein |
RA | 1,478,212 | A→G | S351G (AGT→GGT) | b1410 → | hypothetical protein |
RA | 1,479,250 | T→C | R106R (CGT→CGC) | ynbD → | hypothetical protein |
RA | 1,479,655 | T→C | C241C (TGT→TGC) | ynbD → | hypothetical protein |
RA | 1,481,285 | A→G | A67A (GCA→GCG) | hrpA → | helicase, ATP‑dependent |
RA | 1,481,375 | C→T | I97I (ATC→ATT) | hrpA → | helicase, ATP‑dependent |
RA | 1,482,154 | T→C | V357A (GTA→GCA) | hrpA → | helicase, ATP‑dependent |
RA | 1,484,846 | A→G | A1254A (GCA→GCG) | hrpA → | helicase, ATP‑dependent |
RA | 1,488,168 | A→G | intergenic (+473/‑722) | ald → / → cybB | aldehyde dehydrogenase, NAD‑linked/cytochrome b(561) |
RA | 1,490,230 | T→C | intergenic (‑77/‑264) | b1420 ← / → trg | hypothetical protein/methyl‑accepting chemotaxis protein III |
RA | 1,490,510 | C→T | S6L (TCA→TTA) | trg → | methyl‑accepting chemotaxis protein III |
RA | 1,493,567 | T→C | F86L (TTT→CTT) | b1423 → | hypothetical protein |
RA | 1,497,599 | T→C | H292R (CAC→CGC) | b1428 ← | hypothetical protein |
RA | 1,498,686 | C→T | A30A (GCC→GCT) | tehA → | TehA |
RA | 1,502,652 | T→C | A324A (GCT→GCC) | b1432 → | putative virulence protein |
RA | 1,507,420 | T→C | T18A (ACG→GCG) | b1437 ← | hypothetical protein |
RA | 1,510,339 | T→C | V221A (GTG→GCG) | b1440 → | putative transport protein |
RA | 1,512,627 | T→C | V258A (GTC→GCC) | b1442 → | putative transport system permease protein |
RA | 1,514,629 | A→G | H343R (CAC→CGC) | b1444 → | putative aldehyde dehydrogenase |
RA | 1,516,365 | T→C | D169G (GAC→GGC) | b1448 ← | putative resistance protein |
RA | 1,531,361 | T→C | H188R (CAT→CGT) | b1462 ← | hypothetical protein |
RA | 1,532,150 | A→G | T35A (ACC→GCC) | b1463 → | putative N‑hydroxyarylamine O‑acetyltransferase |
RA | 1,533,355 | G→A | A176A (GCC→GCT) | yddE ← | hypothetical protein |
RA | 1,533,519 | T→C | T122A (ACG→GCG) | yddE ← | hypothetical protein |
RA | 1,535,627 | A→G | R417R (CGT→CGC) | narY ← | cryptic nitrate reductase 2 beta subunit |
RA | 1,548,243 | T→C | V940A (GTC→GCC) | fdnG → | formate dehydrogenase‑N, nitrate‑inducible, alpha subunit |
RA | 1,549,144 | T→C | G220G (GGT→GGC) | fdnH → | formate dehydrogenase‑N, nitrate‑inducible, iron‑sulfur beta subunit |
RA | 1,549,298 | T→C | L272L (TTG→CTG) | fdnH → | formate dehydrogenase‑N, nitrate‑inducible, iron‑sulfur beta subunit |
RA | 1,558,583 | A→G | V124A (GTC→GCC) | b1486 ← | putative transport system permease protein |
RA | 1,561,521 | C→T | S754N (AGC→AAC) | b1489 ← | hypothetical protein |
RA | 1,562,886 | A→G | V299A (GTT→GCT) | b1489 ← | hypothetical protein |
RA | 1,566,541 | T→C | I103V (ATA→GTA) | b1491 ← | hypothetical protein |
RA | 1,567,922 | A→G | F198L (TTC→CTC) | xasA ← | acid sensitivity protein |
RA | 1,568,848 | C→T | A408T (GCC→ACC) | gadB ← | glutamate decarboxylase isozyme |
RA | 1,570,594 | G→A | A878V (GCG→GTG) | pqqL ← | putative peptidase |
RA | 1,572,526 | T→C | D234G (GAC→GGC) | pqqL ← | putative peptidase |
RA | 1,572,698 | G→A | R177C (CGC→TGC) | pqqL ← | putative peptidase |
RA | 1,575,425 | C→T | A73A (GCG→GCA) | yddB ← | hypothetical protein |
RA | 1,587,161 | T→C | I289V (ATT→GTT) | b1505 ← | putative outer membrane protein |
RA | 1,587,936 | A→G | R30R (CGT→CGC) | b1505 ← | putative outer membrane protein |
RA | 1,592,156 | (C)8→7 | coding (3955/3978 nt) | ydeK ← | hypothetical protein |
RA | 1,594,520 | A→G | S531P (TCC→CCC) | ydeK ← | hypothetical protein |
RA | 1,594,566 | A→G | G515G (GGT→GGC) | ydeK ← | hypothetical protein |
RA | 1,596,967 | A→G | L409L (TTA→CTA) | ydeV ← | putative kinase |
RA | 1,598,927 | T→C | L113L (TTA→TTG) | ydeW ← | putative transcriptional regulator, sorC family |
RA | 1,599,102 | T→C | H55R (CAT→CGT) | ydeW ← | putative transcriptional regulator, sorC family |
RA | 1,599,943 | G→A | A144T (GCC→ACC) | b1513 → | putative ATP‑binding component of a transport system |
RA | 1,605,286 | (A)6→5 | coding (264/291 nt) | b1518 → | hypothetical protein |
RA | 1,607,710 | A→G | L332P (CTT→CCT) | uxaB ← | altronate oxidoreductase |
RA | 1,612,018 | C→T | G245D (GGT→GAT) | b1525 ← | putative aldehyde dehydrogenase |
RA | 1,612,901 | T→C | V25A (GTG→GCG) | yneJ → | putative transcriptional regulator LYSR‑type |
RA | 1,613,804 | C→T | S6S (AGC→AGT) | b1527 → | hypothetical protein |
RA | 1,616,549 | A→G | S128S (AGT→AGC) | ydeB ← | hypothetical protein |
RA | 1,616,587 | T→C | S116G (AGT→GGT) | ydeB ← | hypothetical protein |
RA | 1,616,692 | C→T | G81S (GGC→AGC) | ydeB ← | hypothetical protein |
RA | 1,616,789 | C→T | S48S (TCG→TCA) | ydeB ← | hypothetical protein |
RA | 1,617,966 | T→C | N125N (AAT→AAC) | marA → | MarA |
RA | 1,619,900 | T→C | V182A (GTA→GCA) | ydeF → | putative transport protein |
RA | 1,620,798 | Δ1 bp | intergenic (+255/+186) | ydeF → / ← ydeH | putative transport protein/hypothetical protein |
RA | 1,626,669 | G→A | A98A (GCG→GCA) | ydfH → | hypothetical protein |
RA | 1,632,141 | T→C | S166P (TCA→CCA) | b1545 → | hypothetical protein |
RA | 1,633,112 | T→C | T254A (ACA→GCA) | b1547 ← | hypothetical protein |
RA | 1,633,590 | A→G | G94G (GGT→GGC) | b1547 ← | hypothetical protein |
RA | 1,642,279 | A→G | V30A (GTC→GCC) | b1560 ← | hypothetical protein |
RA | 1,650,355 | T→C | F274L (TTC→CTC) | b1579 → | putative transposase |
RA | 1,652,626 | T→C | E180E (GAA→GAG) | rspA ← | starvation sensing protein |
RA | 1,655,245 | T→C | L91L (TTA→TTG) | ynfC ← | hypothetical protein |
RA | 1,656,923 | T→C | P277P (CCT→CCC) | b1587 → | putative oxidoreductase major subunit |
RA | 1,662,601 | T→C | A27A (GCT→GCC) | b1591 → | putative oxidoreductase component |
RA | 1,662,715 | A→G | T65T (ACA→ACG) | b1591 → | putative oxidoreductase component |
RA | 1,664,091 | T→C | S271S (AGT→AGC) | b1592 → | putative chloride channel |
RA | 1,668,532 | G→A | W270* (TGG→TGA) | ynfM → | putative transport protein |
RA | 1,672,562 | T→C | L209P (CTG→CCG) | b1601 → | putative transport protein |
RA | 1,677,885 | A→G | Y102C (TAT→TGT) | b1605 → | putative arginine/ornithine antiporter |
RA | 1,678,414 | A→G | G278G (GGA→GGG) | b1605 → | putative arginine/ornithine antiporter |
RA | 1,680,393 | T→C | W74R (TGG→CGG) | rstA → | response transcriptional regulatory protein |
RA | 1,680,496 | (C)5→4 | coding (323/729 nt) | rstA → | response transcriptional regulatory protein |
RA | 1,684,672 | A→G | intergenic (‑60/+83) | fumC ← / ← fumA | fumarase C/fumarase A |
RA | 1,689,391 | G→A | intergenic (+7/+219) | ydgA → / ← uidC | hypothetical protein/membrane‑associated protein |
RA | 1,689,553 | A→G | intergenic (+169/+57) | ydgA → / ← uidC | hypothetical protein/membrane‑associated protein |
RA | 1,690,777 | T→C | L29L (CTA→CTG) | uidC ← | membrane‑associated protein |
RA | 1,693,549 | A→G | W183R (TGG→CGG) | uidA ← | beta‑D‑glucuronidase |
RA | 1,695,258 | T→C | intergenic (‑182/+39) | uidR ← / ← hdhA | repressor for uid operon/NAD‑dependent 7alpha‑hydroxysteroid dehydrogenase |
RA | 1,695,310 | T→C | Q252R (CAG→CGG) | hdhA ← | NAD‑dependent 7alpha‑hydroxysteroid dehydrogenase |
RA | 1,698,072 | C→T | R232C (CGT→TGT) | malX → | MalX |
RA | 1,698,875 | A→G | V499V (GTA→GTG) | malX → | MalX |
RA | 1,701,951 | T→C | S128G (AGC→GGC) | b1624 ← | hypothetical protein |
RA | 1,702,726 | T→C | intergenic (‑394/‑247) | b1624 ← / → b1625 | hypothetical protein/hypothetical protein |
RA | 1,702,768 | A→G | intergenic (‑436/‑205) | b1624 ← / → b1625 | hypothetical protein/hypothetical protein |
RA | 1,705,521 | C→T | V193V (GTC→GTT) | b1629 → | putative membrane protein |
RA | 1,707,432 | T→C | I89I (ATT→ATC) | ydgO → | hypothetical protein |
RA | 1,709,122 | G→A | A91T (GCC→ACC) | ydgQ → | hypothetical protein |
RA | 1,712,211 | A→G | V473V (GTA→GTG) | ydgR → | putative transport protein |
RA | 1,712,350 | (T)9→8 | intergenic (+55/‑51) | ydgR → / → gst | putative transport protein/glutathionine S‑transferase |
RA | 1,713,565 | G→A | H117Y (CAT→TAT) | pdxY ← | pyridoxal kinase 2 |
RA | 1,713,746 | C→T | P56P (CCG→CCA) | pdxY ← | pyridoxal kinase 2 |
RA | 1,716,150 | A→G | T88T (ACT→ACC) | ydhA ← | hypothetical protein |
RA | 1,718,074 | T→C | S59P (TCC→CCC) | slyB → | putative outer membrane protein |
RA | 1,718,191 | A→G | T98A (ACT→GCT) | slyB → | putative outer membrane protein |
RA | 1,721,090 | C→T | R316* (CGA→TGA) | b1645 → | hypothetical protein |
RA | 1,721,938 | A→G | V598V (GTA→GTG) | b1645 → | hypothetical protein |
RA | 1,722,918 | T→A | N247Y (AAC→TAC) | b1647 ← | hypothetical protein |
RA | 1,723,269 | G→A | P130S (CCA→TCA) | b1647 ← | hypothetical protein |
RA | 1,725,518 | (G)6→5 | coding (836/1098 nt) | nemA → | N‑ethylmaleimide reductase |
RA | 1,727,504 | A→G | T132A (ACT→GCT) | lhr → | Lhr |
RA | 1,729,644 | T→C | M845T (ATG→ACG) | lhr → | Lhr |
RA | 1,731,175 | T→C | R1355R (CGT→CGC) | lhr → | Lhr |
RA | 1,736,520 | A→G | Q218R (CAG→CGG) | purR → | PurR |
RA | 1,738,433 | T→C | F167L (TTT→CTT) | ydhC → | putative transport protein |
RA | 1,739,051 | A→G | M373V (ATG→GTG) | ydhC → | putative transport protein |
RA | 1,739,307 | G→A | intergenic (+161/‑130) | ydhC → / → cfa | putative transport protein/cyclopropane fatty acyl phospholipid synthase |
RA | 1,741,574 | 2 bp→GA | coding (94‑95/1374 nt) | ydhE → | putative transport protein |
RA | 1,749,192 | A→G | V186A (GTG→GCG) | b1672 ← | hypothetical protein |
RA | 1,749,776 | T→C | A693A (GCA→GCG) | b1673 ← | hypothetical protein |
RA | 1,750,491 | T→C | Y455C (TAC→TGC) | b1673 ← | hypothetical protein |
RA | 1,751,328 | A→G | M176T (ATG→ACG) | b1673 ← | hypothetical protein |
RA | 1,753,749 | A→G | I10V (ATC→GTC) | pykF → | pyruvate kinase I |
RA | 1,756,526 | A→G | V75A (GTG→GCG) | ynhG ← | hypothetical protein |
RA | 1,757,874 | T→C | H225R (CAT→CGT) | b1680 ← | hypothetical protein |
RA | 1,758,261 | T→C | E96G (GAA→GGA) | b1680 ← | hypothetical protein |
RA | 1,759,194 | C→T | A208T (GCA→ACA) | ynhC ← | hypothetical protein |
RA | 1,759,287 | G→A | L177L (CTG→TTG) | ynhC ← | hypothetical protein |
RA | 1,762,307 | T→C | Q35R (CAG→CGG) | ydiC ← | hypothetical protein |
RA | 1,765,691 | A→G | V340A (GTG→GCG) | ydiJ ← | putative oxidase |
RA | 1,768,647 | T→C | A12A (GCT→GCC) | b1689 → | hypothetical protein |
RA | 1,776,008 | T→C | Y264Y (TAT→TAC) | b1695 → | putative oxidoreductase |
RA | 1,776,191 | T→C | R325R (CGT→CGC) | b1695 → | putative oxidoreductase |
RA | 1,777,515 | (T)8→9 | intergenic (‑190/‑126) | b1696 ← / → ydiQ | putative ARAC‑type regulatory protein/putative transport protein |
RA | 1,778,478 | T→C | A18A (GCT→GCC) | ydiR → | putative flavoprotein |
RA | 1,782,160 | T→C | V369A (GTG→GCG) | ydiD → | putative ligase/synthetase |
RA | 1,787,068 | G→A | A204T (GCC→ACC) | aroH → | 3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase |
RA | 1,787,410 | A→G | T318A (ACT→GCT) | aroH → | 3‑deoxy‑D‑arabinoheptulosonate‑7‑phosphate synthase |
RA | 1,789,986 | T→C | D20G (GAC→GGC) | b1707 ← | hypothetical protein |
RA | 1,791,298 | T→C | T95T (ACA→ACG) | btuD ← | ATP‑binding component of vitamin B12 transport system |
RA | 1,791,400 | T→C | Q61Q (CAA→CAG) | btuD ← | ATP‑binding component of vitamin B12 transport system |
RA | 1,791,747 | A→G | R129R (CGT→CGC) | btuE ← | vitamin B12 transport |
RA | 1,799,569 | G→A | N342N (AAC→AAT) | thrS ← | threonine tRNA synthetase |
RA | 1,802,603 | T→C | G495G (GGT→GGC) | b1721m → | ankyrin repeat protein |
RA | 1,808,078 | A→G | intergenic (+6/‑157) | yniC → / → b1728 | putative phosphatase/hypothetical protein |
RA | 1,810,941 | T→C | G76G (GGA→GGG) | b1730 ← | hypothetical protein |
RA | 1,812,482 | T→C | F198L (TTC→CTC) | katE → | catalase |
RA | 1,825,271 | A→G | L338P (CTC→CCC) | b1745 ← | hypothetical protein |
RA | 1,826,476 | T→C | N428S (AAC→AGC) | b1746 ← | putative aldehyde dehydrogenase |
RA | 1,827,618 | A→G | R47R (CGT→CGC) | b1746 ← | putative aldehyde dehydrogenase |
RA | 1,830,747 | T→C | L99P (CTG→CCG) | xthA → | exonuclease III |
RA | 1,837,903 | A→G | K138R (AAA→AGA) | b1757 → | putative thiosulfate sulfur transferase |
RA | 1,839,484 | A→G | intergenic (‑51/‑30) | b1758 ← / → b1759 | putative cytochrome oxidase/hypothetical protein |
RA | 1,839,782 | A→G | H90R (CAC→CGC) | b1759 → | hypothetical protein |
RA | 1,841,661 | A→G | T423A (ACC→GCC) | gdhA → | NADP‑specific glutamate dehydrogenase |
RA | 1,842,718 | T→C | T60A (ACA→GCA) | b1762 ← | hypothetical protein |
RA | 1,845,852 | T→C | T61A (ACC→GCC) | selD ← | selenophosphate synthase |
RA | 1,847,298 | A→G | K146K (AAA→AAG) | sppA → | protease IV |
RA | 1,855,431 | A→G | D121D (GAT→GAC) | b1773 ← | putative aldolase |
RA | 1,858,325 | A→G | D344D (GAT→GAC) | b1776 ← | putative oxidoreductase |
RA | 1,860,370 | T→C | E28E (GAA→GAG) | yeaA ← | hypothetical protein |
RA | 1,863,065 | G→A | A199V (GCC→GTC) | b1781 ← | putative aldehyde reductase |
RA | 1,865,362 | T→C | V144A (GTC→GCC) | yeaG → | hypothetical protein |
RA | 1,871,984 | A→G | E129E (GAA→GAG) | yeaK → | hypothetical protein |
RA | 1,874,785 | T→C | G363G (GGT→GGC) | yeaN → | putative amino acid/amine transport protein |
RA | 1,877,746 | A→G | V76A (GTG→GCG) | yeaR ← | hypothetical protein |
RA | 1,877,795 | T→C | S60G (AGT→GGT) | yeaR ← | hypothetical protein |
RA | 1,883,199 | C→T | L171L (CTG→TTG) | yeaW → | hypothetical protein |
RA | 1,890,225 | C→T | R345R (CGG→CGA) | b1808 ← | hypothetical protein |
RA | 1,890,766 | T→C | N165S (AAC→AGC) | b1808 ← | hypothetical protein |
RA | 1,892,514 | T→C | intergenic (+58/+62) | b1810 → / ← b1811 | hypothetical protein/hypothetical protein |
RA | 1,908,347 | T→C | G16G (GGT→GGC) | b1828 → | putative transport protein |
RA | 1,915,434 | G→A | A385T (GCT→ACT) | b1833 → | hypothetical protein |
RA | 1,917,590 | T→C | V688A (GTC→GCC) | b1834 → | hypothetical protein |
RA | 1,919,873 | G→A | D24N (GAT→AAT) | b1836 → | hypothetical protein |
RA | 1,920,485 | T→C | E170G (GAA→GGA) | b1838 ← | protein phosphatase 1 |
RA | 1,920,902 | T→C | Q31R (CAG→CGG) | b1838 ← | protein phosphatase 1 |
RA | 1,923,118 | T→C | intergenic (‑125/‑14) | b1841 ← / → holE | hypothetical protein/DNA polymerase III theta subunit |
RA | 1,923,720 | T→C | V86A (GTT→GCT) | b1843 → | hypothetical protein |
RA | 1,924,185 | A→G | G14G (GGA→GGG) | b1844 → | hypothetical protein |
RA | 1,926,936 | A→G | intergenic (‑73/+136) | ptrB ← / ← yebE | protease II/hypothetical protein |
RA | 1,928,564 | T→C | T70A (ACC→GCC) | yebG ← | hypothetical protein |
RA | 1,930,097 | (A)7→6 | intergenic (+14/+42) | purT → / ← eda | phosphoribosylglycinamide formyltransferase 2/2‑keto‑3‑deoxygluconate 6‑phosphate aldolase |
RA | 1,934,482 | T→C | intergenic (‑144/‑194) | zwf ← / → yebK | glucose‑6‑phosphate dehydrogenase/hypothetical protein |
RA | 1,938,811 | T→C | G262G (GGA→GGG) | yebA ← | hypothetical protein |
RA | 1,941,713 | T→C | S92S (AGT→AGC) | yebI → | hypothetical protein |
RA | 1,945,456 | A→G | D240D (GAT→GAC) | yebC ← | hypothetical protein |
RA | 1,950,024 | T→C | G202G (GGT→GGC) | yecE → | hypothetical protein |
RA | 1,953,902 | T→C | Q377R (CAG→CGG) | b1872 ← | biotin sulfoxide reductase 2 |
RA | 1,957,451 | T→C | L140L (CTA→CTG) | b1875 ← | hypothetical protein |
RA | 1,958,588 | T→C | M168T (ATG→ACG) | argS → | arginine tRNA synthetase |
RA | 1,962,070 | A→T | P335P (CCT→CCA) | flhA ← | FlhA |
RA | 1,962,105 | C→T | A324T (GCC→ACC) | flhA ← | FlhA |
RA | 1,963,691 | G→A | A175A (GCC→GCT) | flhB ← | FlhB |
RA | 1,964,115 | G→A | S34L (TCA→TTA) | flhB ← | FlhB |
RA | 1,968,327 | T→C | I228V (ATT→GTT) | tap ← | methyl‑accepting chemotaxis protein IV |
RA | 1,972,288 | G→A | T354M (ACG→ATG) | cheA ← | CheA |
RA | 1,973,518 | A→T | D254E (GAT→GAA) | motB ← | MotB |
RA | 1,973,993 | T→C | E96G (GAA→GGA) | motB ← | MotB |
RA | 1,974,585 | A→G | R193R (CGT→CGC) | motA ← | MotA |
RA | 1,975,051 | G→A | A38V (GCC→GTC) | motA ← | MotA |
RA | 1,975,207 | T→C | intergenic (‑44/+83) | motA ← / ← flhC | MotA/FlhC |
MC JC | 1,976,527 | Δ776 bp | insB5–insA5 | insB5, insA5 | |
RA | 1,980,319 | A→G | H31H (CAT→CAC) | otsB ← | trehalose‑6‑phosphate phophatase |
RA | 1,980,552 | (A)6→5 | intergenic (‑141/+26) | otsB ← / ← araH | trehalose‑6‑phosphate phophatase/ABC‑type arabinose transport system permease component |
RA | 1,980,940 | +C | coding (1/363 nt) coding (627/627 nt) |
araH ← araH ← |
ABC‑type arabinose transport system permease component ABC‑type arabinose transport system permease component |
RA | 1,983,543 | (C)5→4 | coding (609/990 nt) | araF ← | L‑arabinose‑binding periplasmic protein |
RA | 1,983,890 | T→C | T88A (ACT→GCT) | araF ← | L‑arabinose‑binding periplasmic protein |
RA | 1,987,280 | A→G | R78R (CGT→CGC) | yecH ← | hypothetical protein |
RA | 1,988,480 | A→G | L259L (TTA→TTG) | tyrP → | tyrosine‑specific transport system |
RA | 1,990,664 | A→G | S59S (AGT→AGC) | pgsA ← | phosphatidylglycerophosphate synthetase |
RA | 1,990,667 | C→T | Q58Q (CAG→CAA) | pgsA ← | phosphatidylglycerophosphate synthetase |
RA | 1,992,261 | T→C | S157G (AGT→GGT) | b1913 ← | excinuclease ABC subunit C |
RA | 1,995,916 | T→C | Y196C (TAC→TGC) | yecS ← | putative transport system permease protein |
RA | 1,998,039 | A→G | Y124H (TAC→CAC) | fliY ← | putative periplasmic binding transport protein |
RA | 1,999,772 | T→C | H4R (CAC→CGC) | b1922 ← | sigma factor 28 |
RA | 2,008,480 | +A | coding (637/654 nt) | yedK → | hypothetical protein |
RA | 2,010,514 | T→C | intergenic (‑141/‑10) | yedM ← / → b1936 | hypothetical protein/hypothetical protein |
RA | 2,011,752 | T→C | S168P (TCC→CCC) | fliF → | FliF |
RA | 2,013,946 | G→A | Q26Q (CAG→CAA) | fliH → | FliH |
RA | 2,015,976 | A→G | E3E (GAA→GAG) | fliJ → | FliJ |
RA | 2,017,469 | G→A | T354T (ACG→ACA) | fliK → | flagellar hook‑length control protein |
RA | 2,028,023 | A→G | I155V (ATT→GTT) | yedA → | putative transmembrane subunit |
RA | 2,028,708 | A→G | V78A (GTG→GCG) | vsr ← | DNA mismatch endonuclease |
RA | 2,037,676 | (C)5→6 | coding (177/1005 nt) | b1971 → | putative reductase |
RA | 2,043,272 | A→G | S130G (AGT→GGT) | b1978 → | hypothetical protein |
RA | 2,044,033 | (C)5→6 | coding (1149/7152 nt) | b1978 → | hypothetical protein |
RA | 2,045,049 | T→C | V722A (GTC→GCC) | b1978 → | hypothetical protein |
RA | 2,063,343 | T→C | A148A (GCA→GCG) | cobU ← | cobinamide kinase/cobinamide phosphate guanylyltransferase |
RA | 2,065,866 | T→C | intergenic (‑523/‑764) | trs56 ← / → b1995 | IS5 transposase/hypothetical protein |
RA | 2,066,300 | T→C | intergenic (‑957/‑330) | trs56 ← / → b1995 | IS5 transposase/hypothetical protein |
RA | 2,069,029 | T→C | S169S (AGT→AGC) | yeeP → | putative histone |
RA | 2,071,598 | A→G | R680G (AGG→GGG) | b2000 → | outer membrane fluffing protein |
RA | 2,072,030 | T→A | C824S (TGC→AGC) | b2000 → | outer membrane fluffing protein |
RA | 2,074,403 | T→C | V25A (GTG→GCG) | yeeS → | putative DNA repair protein, RADC family |
RA | 2,075,196 | (G)5→4 | coding (63/369 nt) | yeeU → | putative structural protein |
RA | 2,078,049 | A→G | F189L (TTC→CTC) | yeeA ← | hypothetical protein |
RA | 2,078,857 | T→C | Y143C (TAC→TGC) | sbmC ← | SbmC |
RA | 2,080,323 | T→C | T85A (ACG→GCG) | dacD ← | penicillin binding protein 6b |
RA | 2,081,054 | A→G | T93A (ACC→GCC) | sbcB → | exonuclease I |
RA | 2,087,857 | T→C | intergenic (‑95/‑161) | yefM ← / → hisL | hypothetical protein/his operon leader peptide |
RA | 2,088,609 | T→C | P132P (CCT→CCC) | hisG → | ATP phosphoribosyltransferase |
RA | 2,089,888 | T→C | L257P (CTC→CCC) | hisD → | L‑histidinal:NAD+ oxidoreductase |
RA | 2,092,192 | A→G | T235A (ACC→GCC) | b2022 → | imidazoleglycerolphosphate dehydratase |
RA | 2,094,539 | T→C | V225A (GTT→GCT) | hisF → | imidazole glycerol phosphate synthase holoenzyme |
RA | 2,097,074 | T→C | T188A (ACC→GCC) | ugd ← | UDP‑glucose 6‑dehydrogenase |
RA | 2,106,960 | T→C | D216G (GAC→GGC) | rfbX ← | putative O‑antigen transporter |
RA | 2,106,978 | A→G | V210A (GTG→GCG) | rfbX ← | putative O‑antigen transporter |
RA | 2,107,690 | C→T | W157* (TGG→TGA) | rfbC ← | dTDP‑6‑deoxy‑D‑glucose‑3,5 epimerase |
RA | 2,108,194 | T→C | Q283R (CAG→CGG) | rfbA ← | glucose‑1‑phosphate thymidylyltransferase |
RA | 2,109,166 | A→G | V278A (GTC→GCC) | rfbD ← | dTDP‑6‑deoxy‑L‑mannose‑dehydrogenase |
RA | 2,111,589 | A→G | M254T (ATG→ACG) | galF ← | putative a UDP‑gal transferase |
RA | 2,111,654 | T→C | A232A (GCA→GCG) | galF ← | putative a UDP‑gal transferase |
RA | 2,113,625 | T→C | L98L (TTA→TTG) | wcaM ← | hypothetical protein |
RA | 2,115,180 | T→C | Q416R (CAG→CGG) | wcaK ← | putative galactokinase |
RA | 2,116,015 | A→G | F138L (TTT→CTT) | wcaK ← | putative galactokinase |
RA | 2,123,880 | T→C | Q123R (CAG→CGG) | wcaH ← | GDP‑mannose mannosyl hydrolase |
RA | 2,133,804 | T→C | H106R (CAC→CGC) | wzb ← | putative protein‑tyrosine‑phosphatase |
RA | 2,143,530 | T→C | L748P (CTG→CCG) | yegE → | putative sensor‑type protein |
RA | 2,147,364 | A→G | R548R (CGT→CGC) | b2070 ← | putative chaperonin |
RA | 2,151,093 | A→G | C20R (TGC→CGC) | b2073 ← | hypothetical protein |
RA | 2,161,130 | T→C | V78A (GTC→GCC) | baeS → | BaeS |
RA | 2,165,874 | T→C | L50L (TTA→TTG) | b2084 ← | hypothetical protein |
RA | 2,167,779 | T→C | intergenic (+146/‑470) | b2086 → / → b2088 | hypothetical protein/hypothetical protein |
RA | 2,170,345 | C→T | G184E (GGA→GAA) | gatD ← | galactitol‑1‑phosphate dehydrogenase |
RA | 2,172,208 | T→C | M31V (ATG→GTG) | gatC ← | PTS system galactitol‑specific enzyme IIC |
RA | 2,173,756 | T→C | T196A (ACT→GCT) | gatZ ← | putative tagatose‑6‑phosphate kinase 1 |
RA | 2,175,131 | G→A | Q34* (CAA→TAA) | gatY ← | tagatose‑bisphosphate aldolase 1 |
RA | 2,177,153 | T→C | Y105H (TAT→CAT) | yegT → | putative nucleoside permease protein |
RA | 2,177,832 | T→C | V331A (GTG→GCG) | yegT → | putative nucleoside permease protein |
RA | 2,185,017 | Δ1 bp | coding (38/339 nt) | b2107 → | hypothetical protein |
RA | 2,185,099 | T→C | S40S (AGT→AGC) | b2107 → | hypothetical protein |
RA | 2,195,623 | T→C | intergenic (+1270/‑2676) | metG → / → yehI | methionine tRNA synthetase/putative regulator |
RA | 2,201,450 | A→G | E1051G (GAG→GGG) | yehI → | putative regulator |
RA | 2,204,258 | T→C | W182R (TGG→CGG) | yehM → | hypothetical protein |
RA | 2,207,023 | A→G | D346G (GAC→GGC) | yehP → | hypothetical protein |
RA | 2,208,197 | A→C | T360P (ACC→CCC) | b2122 → | hypothetical protein |
RA | 2,208,331 | A→G | S404S (TCA→TCG) | b2122 → | hypothetical protein |
RA | 2,208,505 | G→A | R462R (CGG→CGA) | b2122 → | hypothetical protein |
RA | 2,210,124 | T→C | E31E (GAA→GAG) | yehS ← | hypothetical protein |
RA | 2,210,781 | T→C | M68V (ATG→GTG) | b2125 ← | hypothetical protein |
RA | 2,216,746 | G→C | S252S (TCC→TCG) | yehZ ← | putative transport system permease protein |
RA | 2,223,632 | A→G | L15P (CTG→CCG) | yohC ← | hypothetical protein |
RA | 2,225,197 | T→C | T32A (ACC→GCC) | yohF ← | putative oxidoreductase |
RA | 2,225,570 | T→C | T324A (ACA→GCA) | yohG ← | putative channel/filament proteins |
RA | 2,242,496 | T→C | G189G (GGT→GGC) | yeiG → | putative esterase |
RA | 2,242,918 | A→G | T624T (ACT→ACC) | cirA ← | CirA |
RA | 2,246,351 | T→C | S68G (AGT→GGT) | lysP ← | lysine‑specific permease |
RA | 2,247,350 | T→C | S97G (AGT→GGT) | yeiE ← | putative transcriptional regulator LYSR‑type |
RA | 2,254,317 | T→C | T347A (ACG→GCG) | yeiM ← | putative transport system permease protein |
RA | 2,254,559 | A→G | V266A (GTA→GCA) | yeiM ← | putative transport system permease protein |
RA | 2,259,919 | C→T | R156H (CGC→CAC) | fruK ← | fructose‑1‑phosphate kinase |
RA | 2,261,454 | G→A | A21V (GCG→GTG) | fruB ← | PTS system, fructose‑specific IIA/fpr component |
RA | 2,264,802 | T→C | F180L (TTT→CTT) | yeiQ → | putative oxidoreductase |
RA | 2,265,885 | A→G | S13G (AGC→GGC) | yeiR → | hypothetical protein |
RA | 2,276,343 | T→C | intergenic (‑86/+247) | yejG ← / ← bcr | hypothetical protein/bicyclomycin resistance protein |
RA | 2,281,515 | A→G | R151R (CGT→CGC) | yejK ← | hypothetical protein |
RA | 2,281,741 | T→C | D76G (GAC→GGC) | yejK ← | hypothetical protein |
RA | 2,284,989 | (C)5→4 | coding (1932/2511 nt) | yejO ← | putative ATP‑binding component of a transport system |
RA | 2,288,635 | G→A | G39D (GGC→GAC) | narP → | nitrate/nitrite response regulator |
RA | 2,289,578 | G→A | L285L (CTG→TTG) | ccmH ← | CcmH |
RA | 2,290,493 | A→G | N164N (AAT→AAC) | dsbE ← | disulfide oxidoreductase |
RA | 2,293,202 | T→C | M67V (ATG→GTG) | ccmE ← | cytochrome c biogenesis |
RA | 2,296,123 | T→C | T53A (ACC→GCC) | napC ← | cytochrome c‑type protein |
RA | 2,297,335 | A→G | G88G (GGT→GGC) | napH ← | ferredoxin‑type protein: electron transfer |
RA | 2,298,561 | T→C | H738R (CAC→CGC) | napA ← | putative nitrate reductase 3 |
RA | 2,299,266 | T→C | N503S (AAC→AGC) | napA ← | putative nitrate reductase 3 |
RA | 2,302,596 | A→G | intergenic (+183/+532) | eco → / ← yojH | ecotin/hypothetical protein |
RA | 2,306,256 | T→C | E127G (GAA→GGA) | yojI ← | putative ATP‑binding component of a transport system |
RA | 2,309,476 | C→T | A27T (GCC→ACC) | yojL ← | hypothetical protein |
RA | 2,311,335 | (T)5→4 | intergenic (‑566/‑173) | ompC ← / → yojN | outer membrane protein 1b (Ib;c)/putative 2‑component sensor protein |
RA | 2,317,837 | T→C | A4A (GCA→GCG) | rcsC ← | RcsC |
RA | 2,318,996 | G→A | D312N (GAC→AAC) | atoS → | AtoS |
RA | 2,321,092 | G→A | A403T (GCC→ACC) | atoC → | ornithine decarboxylase antizyme |
RA | 2,324,469 | (G)6→7 | coding (341/1185 nt) | atoB → | acetyl‑CoA acetyltransferase |
RA | 2,324,986 | (C)6→7 | coding (858/1185 nt) | atoB → | acetyl‑CoA acetyltransferase |
RA | 2,327,242 | T→C | V192V (GTA→GTG) | b2226 ← | hypothetical protein |
RA | 2,327,687 | A→G | V44A (GTG→GCG) | b2226 ← | hypothetical protein |
RA | 2,331,739 | A→G | intergenic (‑3922/+617) | b2226 ← / ← b2229 | hypothetical protein/hypothetical protein |
RA | 2,343,154 | T→C | R90R (CGT→CGC) | nrdA → | ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
RA | 2,345,161 | T→C | C759C (TGT→TGC) | nrdA → | ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
RA | 2,349,841 | T→C | D185G (GAC→GGC) | glpT ← | sn‑glycerol‑3‑phosphate permease |
RA | 2,349,989 | T→C | M136V (ATG→GTG) | glpT ← | sn‑glycerol‑3‑phosphate permease |
RA | 2,360,682 | T→C | A324A (GCA→GCG) | b2249 ← | hypothetical protein |
RA | 2,362,769 | G→A | E66K (GAA→AAA) | yfaO → | hypothetical protein |
RA | 2,365,769 | T→C | C227R (TGC→CGC) | b2254 → | putative sugar transferase |
RA | 2,370,869 | C→T | A98V (GCG→GTG) | b4533 → | hypothetical protein |
RA | 2,370,890 | T→C | V105A (GTG→GCG) | b4533 → | hypothetical protein |
RA | 2,375,871 | T→C | N470S (AAC→AGC) | menD ← | 2‑oxoglutarate decarboxylase |
RA | 2,376,227 | +G | coding (1053/1671 nt) | menD ← | 2‑oxoglutarate decarboxylase |
RA | 2,379,330 | A→G | G78G (GGT→GGC) | elaA ← | hypothetical protein |
RA | 2,387,710 | T→C | V193A (GTG→GCG) | b2275 → | hypothetical protein |
RA | 2,391,348 | A→G | A573A (GCT→GCC) | nuoL ← | NADH dehydrogenase I chain L |
RA | 2,392,487 | T→C | T194A (ACC→GCC) | nuoL ← | NADH dehydrogenase I chain L |
RA | 2,393,734 | A→G | G61G (GGT→GGC) | nuoJ ← | NADH dehydrogenase I chain J |
RA | 2,406,831 | A→G | intergenic (+33/‑51) | b2290 → / → b2291 | putative aminotransferase/putative alpha helix protein |
RA | 2,409,290 | G→A | A28V (GCG→GTG) | yfbS ← | putative transport protein |
RA | 2,409,738 | T→C | A130A (GCA→GCG) | yfbT ← | putative phosphatase |
RA | 2,417,813 | T→C | intergenic (‑8/+48) | b2300 ← / ← yfcF | hypothetical protein/hypothetical protein |
RA | 2,418,528 | (G)5→6 | intergenic (‑23/‑113) | yfcF ← / → yfcG | hypothetical protein/putative S‑transferase |
JC | 2,419,010 | (C)6→9 | coding (370/648 nt) | yfcG → | putative S‑transferase |
RA | 2,419,074 | A→G | N145S (AAC→AGC) | yfcG → | putative S‑transferase |
RA | 2,420,531 | A→G | G268G (GGA→GGG) | b2304 → | putative sugar nucleotide epimerase |
RA | 2,425,773 | A→G | G13G (GGT→GGC) | argT ← | ArgT |
RA | 2,429,483 | T→C | E65E (GAA→GAG) | dedD ← | putative lipoprotein |
RA | 2,438,697 | A→C | L310R (CTG→CGG) | fabB ← | 3‑oxoacyl‑[acyl‑carrier‑protein] synthase I |
RA | 2,442,106 | A→G | S28S (AGT→AGC) | b2325 ← | hypothetical protein |
RA | 2,448,289 | C→T | A108T (GCA→ACA) | b2333 ← | putative fimbrial‑like protein |
RA | 2,449,280 | T→C | T109A (ACC→GCC) | b2335 ← | putative fimbrial protein |
RA | 2,458,272 | (G)5→4 | coding (218/1311 nt) | b2342 ← | putative acyltransferase |
RA | 2,458,650 | +G | intergenic (‑161/+20) | b2342 ← / ← b2343 | putative acyltransferase/hypothetical protein |
RA | 2,461,706 | T→C | S225S (AGT→AGC) | b2345 → | hypothetical protein |
RA | 2,464,010 | T→C | H230H (CAT→CAC) | yfdC → | putative transport |
RA | 2,465,657 | T→C | Y365H (TAT→CAT) | intC → | putative prophage Sf6‑like integrase |
RA | 2,466,368 | C→T | D45D (GAC→GAT) | b2351 → | putative glycan biosynthesis enzyme |
RA | 2,470,298 | A→G | I37T (ATT→ACT) | b2356 ← | hypothetical protein |
RA | 2,470,983 | T→C | Y95C (TAC→TGC) | yfdO ← | hypothetical protein |
RA | 2,472,861 | T→C | G270G (GGT→GGC) | b2360 → | hypothetical protein |
RA | 2,483,335 | (C)6→5 | coding (942/3594 nt) | evgS → | EvgS |
RA | 2,487,208 | (A)6→5 | coding (20/1185 nt) | yfdE ← | hypothetical protein |
RA | 2,488,381 | A→G | I530I (ATT→ATC) | b2373 ← | hypothetical protein |
RA | 2,496,626 | G→A | intergenic (‑311/‑65) | b2379 ← / → b2380 | putative aminotransferase/putative sensor protein |
RA | 2,501,888 | +C | coding (618/2496 nt) | b2383 ← | putative PTS system enzyme IIA component, enzyme I |
RA | 2,505,495 | C→T | Q140Q (CAG→CAA) | b2386 ← | putative transport protein |
RA | 2,515,312 | T→C | M181V (ATG→GTG) | b2395 ← | hypothetical protein |
RA | 2,519,341 | A→G | noncoding (69/76 nt) | lysV → | tRNA‑Lys |
RA | 2,532,993 | A→G | D303G (GAC→GGC) | ptsI → | PEP‑protein phosphotransferase system enzyme I |
RA | 2,534,957 | A→G | S101P (TCG→CCG) | pdxK ← | pyridoxal/pyridoxine/pyridoxamine kinase |
RA | 2,552,312 | T→C | V297V (GTA→GTG) | yfeG ← | putative ARAC‑type regulatory protein |
RA | 2,556,088 | G→A | R204R (CGC→CGT) | b2441 ← | ethanolamine ammonia‑lyase, heavy chain |
RA | 2,557,200 | T→C | V137A (GTG→GCG) | b2442 → | putative prophage integrase |
RA | 2,559,003 | G→A | intergenic (+85/‑385) | b2443 → / → b2444 | hypothetical protein/hypothetical protein |
RA | 2,560,887 | T→C | V115A (GTG→GCG) | b2447 → | hypothetical protein |
RA | 2,561,503 | A→G | intergenic (+366/‑94) | b2447 → / → b2448 | hypothetical protein/hypothetical protein |
RA | 2,562,351 | G→A | G118S (GGC→AGC) | b2449 → | hypothetical protein |
RA | 2,563,585 | (C)5→6 | coding (1320/1404 nt) | b2451 ← | hypothetical protein |
RA | 2,564,113 | G→A | G264G (GGC→GGT) | b2451 ← | hypothetical protein |
RA | 2,574,803 | A→G | L532P (CTG→CCG) | b2463 ← | putative multimodular enzyme |
RA | 2,576,595 | T→C | intergenic (‑198/‑91) | b2463 ← / → talA | putative multimodular enzyme/transaldolase A |
RA | 2,579,447 | T→C | S598P (TCG→CCG) | tktB → | transketolase 2 isozyme |
RA | 2,582,538 | A→G | G336G (GGT→GGC) | yffG ← | putative oxidoreductase Fe‑S subunit |
RA | 2,583,799 | (T)7→6 | coding (49/1701 nt) | narQ → | NarQ |
RA | 2,585,577 | G→A | intergenic (+126/‑38) | narQ → / → acrD | NarQ/AcrD |
RA | 2,586,558 | A→G | Q315R (CAG→CGG) | acrD → | AcrD |
RA | 2,590,989 | T→C | intergenic (+7/+103) | b4537 → / ← ypfH | hypothetical protein/hypothetical protein |
RA | 2,596,487 | T→C | Q133Q (CAA→CAG) | nlpB ← | lipoprotein‑34 |
RA | 2,597,825 | A→G | intergenic (‑45/‑101) | dapA ← / → b2479 | dihydrodipicolinate synthase/GcvR |
RA | 2,612,076 | T→C | A41A (GCT→GCC) | focB → | putative formate transporter |
RA | 2,613,076 | T→C | T276A (ACT→GCT) | perM ← | putative permease |
RA | 2,621,188 | A→G | Y42C (TAT→TGT) | ppk → | polyphosphate kinase |
RA | 2,630,942 | T→C | K383K (AAA→AAG) | guaB ← | IMP dehydrogenase |
RA | 2,631,832 | (T)6→5 | coding (259/1467 nt) | guaB ← | IMP dehydrogenase |
RA | 2,639,286 | A→G | V180A (GTG→GCG) | gcpE ← | hypothetical protein |
RA | 2,644,497 | A→G | R283R (CGT→CGC) | pbpC ← | putative peptidoglycan enzyme |
RA | 2,644,603 | (G)6→5 | coding (743/2313 nt) | pbpC ← | putative peptidoglycan enzyme |
RA | 2,645,360 | T→C | I1650V (ATT→GTT) | b2520 ← | hypothetical protein |
RA | 2,647,298 | T→C | T1004A (ACG→GCG) | b2520 ← | hypothetical protein |
RA | 2,661,865 | T→A | L135Q (CTG→CAG) | suhB → | SuhB |
RA | 2,665,031 | A→G | V279A (GTG→GCG) | hcaT ← | HcaT |
RA | 2,666,143 | A→G | I258I (ATT→ATC) | hcaR ← | HcaR |
RA | 2,669,800 | T→C | C186R (TGT→CGT) | hcaB → | 2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase |
RA | 2,673,594 | T→C | Y74C (TAC→TGC) | yphC ← | putative oxidoreductase |
RA | 2,675,068 | T→C | E438E (GAA→GAG) | yphE ← | putative ATP‑binding component of a transport system |
RA | 2,681,547 | T→C | V222A (GTG→GCG) | b2550 → | putative NAGC‑like transcriptional regulator |
RA | 2,684,470 | T→C | Y206H (TAC→CAC) | hmpA → | dihydropteridine reductase |
RA | 2,690,602 | T→C | T988A (ACT→GCT) | purL ← | phosphoribosylformyl‑glycineamide synthetase |
RA | 2,691,024 | A→T | F847Y (TTT→TAT) | purL ← | phosphoribosylformyl‑glycineamide synthetase |
RA | 2,693,606 | A→G | intergenic (‑43/‑353) | purL ← / → yfhD | phosphoribosylformyl‑glycineamide synthetase/putative periplasmic binding transport protein |
RA | 2,694,050 | A→G | Y31C (TAC→TGC) | yfhD → | putative periplasmic binding transport protein |
RA | 2,696,865 | T→C | P53P (CCT→CCC) | yfhH → | hypothetical protein |
RA | 2,699,813 | T→C | E226G (GAA→GGA) | recO ← | RecO |
RA | 2,709,504 | T→C | G355G (GGT→GGC) | nadB → | quinolinate synthetase B protein |
RA | 2,711,680 | G→A | V255V (GTG→GTA) | srmB → | ATP‑dependent RNA helicase |
RA | 2,711,991 | T→C | L359P (CTG→CCG) | srmB → | ATP‑dependent RNA helicase |
RA | 2,718,460 | T→C | I163T (ATC→ACC) | yfiQ → | hypothetical protein |
RA | 2,720,435 | A→G | L821L (TTA→TTG) | yfiQ → | hypothetical protein |
RA | 2,723,265 | T→C | T168A (ACG→GCG) | kgtP ← | alpha‑ketoglutarate permease |
RA | 2,729,373 | +C | intergenic (‑195/+247) | rrsG ← / ← clpB | 16S ribosomal RNA/ClpB |
RA | 2,732,197 | T→C | intergenic (‑4/+126) | clpB ← / ← yfiH | ClpB/hypothetical protein |
RA | 2,732,361 | T→C | T232A (ACC→GCC) | yfiH ← | hypothetical protein |
RA | 2,746,200 | T→C | S73S (AGT→AGC) | b2611 → | hypothetical protein |
RA | 2,747,389 | Δ1 bp | coding (572/591 nt) | b4540 → | hypothetical protein |
RA | 2,748,983 | T→C | A44A (GCT→GCC) | yfjB → | hypothetical protein |
RA | 2,751,091 | G→C | A426P (GCT→CCT) | recN → | RecN |
RA | 2,753,655 | T→C | intergenic (+256/‑525) | smpB → / → intA | small protein B/prophage CP4‑57 integrase |
RA | 2,754,691 | T→C | V171A (GTT→GCT) | intA → | prophage CP4‑57 integrase |
RA | 2,759,957 | A→G | T535T (ACT→ACC) | yfjK ← | hypothetical protein |
RA | 2,765,528 | (C)7→8 | intergenic (+152/‑203) | yfjO → / → b2632 | hypothetical protein/putative GTP‑binding protein |
RA | 2,766,382 | C→G | P218A (CCC→GCC) | b2632 → | putative GTP‑binding protein |
RA | 2,766,423 | G→A | R231R (CGG→CGA) | b2632 → | putative GTP‑binding protein |
RA | 2,766,427 | 2 bp→AC | coding (697‑698/864 nt) | b2632 → | putative GTP‑binding protein |
RA | 2,766,473 | A→G | D248G (GAT→GGT) | b2632 → | putative GTP‑binding protein |
RA | 2,766,475 | A→G | T249A (ACC→GCC) | b2632 → | putative GTP‑binding protein |
RA | 2,774,233 | T→C | G98G (GGT→GGC) | yfjX → | hypothetical protein |
RA | 2,778,911 | T→C | T656A (ACT→GCT) | ypjA ← | putative ATP‑binding component of a transport system |
RA | 2,781,020 | +G | intergenic (‑144/+65) | ypjA ← / ← b2648 | putative ATP‑binding component of a transport system/hypothetical protein |
RA | 2,781,027 | C→G | intergenic (‑151/+58) | ypjA ← / ← b2648 | putative ATP‑binding component of a transport system/hypothetical protein |
RA | 2,785,180 | Δ1 bp | coding (413/495 nt) | b2655 → | hypothetical protein |
RA | 2,790,474 | T→C | L394P (CTG→CCG) | gabD → | succinate‑semialdehyde dehydrogenase, NADP‑dependent activity |
RA | 2,794,501 | A→G | S103P (TCT→CCT) | ygaU ← | hypothetical protein |
RA | 2,796,091 | A→G | intergenic (+26/+21) | ygaP → / ← stpA | hypothetical protein/StpA |
RA | 2,798,359 | A→G | T65A (ACT→GCT) | b2672 → | hypothetical protein |
RA | 2,800,815 | A→G | I483V (ATC→GTC) | nrdE → | ribonucleoside‑diphosphate reductase 2 alpha subunit |
RA | 2,801,368 | (T)7→6 | coding (2000/2145 nt) | nrdE → | ribonucleoside‑diphosphate reductase 2 alpha subunit |
RA | 2,804,653 | T→C | V208A (GTG→GCG) | proW → | high‑affinity transport system for glycine betaine and proline |
RA | 2,805,798 | A→G | N216D (AAC→GAC) | proX → | high‑affinity transport system for glycine betaine and proline |
RA | 2,806,271 | T→C | intergenic (+126/‑1367) | proX → / → b2682 | high‑affinity transport system for glycine betaine and proline/hypothetical protein |
RA | 2,812,848 | T→C | intergenic (‑94/+57) | ygaG ← / ← gshA | hypothetical protein/gamma‑glutamate‑cysteine ligase |
RA | 2,812,859 | Δ1 bp | intergenic (‑105/+46) | ygaG ← / ← gshA | hypothetical protein/gamma‑glutamate‑cysteine ligase |
RA | 2,818,582 | A→G | N484N (AAT→AAC) | alaS ← | alanyl‑tRNA synthetase |
RA | 2,820,144 | Δ1 bp | intergenic (+24/+18) | b4542 → / ← oraA | hypothetical protein/OraA |
RA | 2,823,915 | A→G | K21E (AAG→GAG) | srlA → | PTS system, glucitol/sorbitol‑specific IIC component |
RA | 2,824,797 | T→C | F128S (TTT→TCT) | srlE → | PTS system glucitol/sorbitol‑specific enzyme IIBC component |
RA | 2,825,077 | T→C | C221C (TGT→TGC) | srlE → | PTS system glucitol/sorbitol‑specific enzyme IIBC component |
RA | 2,825,102 | T→C | F230L (TTC→CTC) | srlE → | PTS system glucitol/sorbitol‑specific enzyme IIBC component |
RA | 2,834,144 | T→C | L435L (TTA→TTG) | hypF ← | transcriptional regulatory protein |
RA | 2,835,977 | T→C | N51S (AAC→AGC) | hydN ← | HydN |
RA | 2,838,044 | +G | coding (498/1458 nt) | ascF → | PTS system enzyme IIBC |
RA | 2,838,055 | Δ1 bp | coding (509/1458 nt) | ascF → | PTS system enzyme IIBC |
RA | 2,840,573 | T→C | intergenic (+136/+23) | ascB → / ← hycI | 6‑phospho‑beta‑glucosidase/HycI |
RA | 2,842,033 | G→T | R67R (CGC→CGA) | hycG ← | hydrogenase activity |
RA | 2,842,316 | T→C | T154A (ACT→GCT) | hycF ← | putative iron‑sulfur protein of hydrogenase 3 |
RA | 2,843,138 | G→A | P453S (CCG→TCG) | hycE ← | large subunit of hydrogenase 3 |
RA | 2,844,596 | A→G | R280R (CGT→CGC) | hycD ← | membrane‑spanning protein of hydrogenase 3 |
RA | 2,847,139 | A→G | G42G (GGT→GGC) | hycC ← | membrane‑spanning protein of hydrogenase 3 |
RA | 2,851,044 | A→G | T296A (ACG→GCG) | hypD → | HypD |
RA | 2,861,203 | A→G | A282A (GCA→GCG) | b2737 → | hypothetical protein |
RA | 2,862,881 | T→C | L208P (CTA→CCA) | ygbM → | hypothetical protein |
RA | 2,863,911 | C→T | P263L (CCT→CTT) | b2740 → | putative transport protein |
RA | 2,868,544 | T→C | S262G (AGT→GGT) | ygbO ← | putative hydrogenase subunit |
RA | 2,877,392 | T→C | E135G (GAG→GGG) | b2755 ← | hypothetical protein |
RA | 2,885,388 | A→G | intergenic (‑146/+213) | ygcB ← / ← cysH | hypothetical protein/3'‑phosphoadenosine 5'‑phosphosulfate reductase |
RA | 2,885,561 | (C)5→4 | intergenic (‑319/+40) | ygcB ← / ← cysH | hypothetical protein/3'‑phosphoadenosine 5'‑phosphosulfate reductase |
RA | 2,896,819 | +C | coding (622/657 nt) | ygcU ← | putative oxidoreductase subunit |
RA | 2,902,688 | A→G | intergenic (+1292/+81) | ygcE → / ← ygcF | putative kinase/hypothetical protein |
RA | 2,915,759 | A→G | D894G (GAT→GGT) | barA → | sensor‑regulator |
RA | 2,922,447 | T→C | intergenic (‑312/+310) | b2792 ← / ← syd | hypothetical protein/Syd |
RA | 2,922,834 | T→C | T157A (ACG→GCG) | syd ← | Syd |
RA | 2,925,058 | A→C | E243D (GAA→GAC) | ygdH → | hypothetical protein |
RA | 2,925,821 | T→C | intergenic (+127/‑430) | ygdH → / → sdaC | hypothetical protein/putative serine transporter |
RA | 2,931,354 | G→A | G119G (GGC→GGT) | fucA ← | L‑fuculose‑1‑phosphate aldolase |
RA | 2,933,024 | T→C | R256R (CGT→CGC) | fucP → | fucose permease |
RA | 2,935,409 | T→C | intergenic (+28/‑51) | fucI → / → fucK | L‑fucose isomerase/L‑fuculokinase |
RA | 2,940,324 | G→A | A89V (GCC→GTC) | gcvA ← | GcvA |
RA | 2,940,536 | T→C | A18A (GCA→GCG) | gcvA ← | GcvA |
RA | 2,941,864 | T→C | M169T (ATG→ACG) | b2810 → | hypothetical protein |
RA | 2,943,196 | T→C | K223K (AAA→AAG) | ygdL ← | hypothetical protein |
RA | 2,947,112 | T→C | intergenic (‑80/‑152) | b2817 ← / → argA | putative amidase/N‑acetylglutamate synthase |
RA | 2,947,355 | T→C | M31T (ATG→ACG) | argA → | N‑acetylglutamate synthase |
RA | 2,953,377 | T→C | T217A (ACG→GCG) | recB ← | RecB |
RA | 2,954,264 | A→T | D881E (GAT→GAA) | ptr ← | protease III |
RA | 2,958,357 | G→A | S698S (AGC→AGT) | recC ← | RecC |
RA | 2,965,001 | T→C | M486V (ATG→GTG) | ptsP ← | PtsP |
RA | 2,971,616 | A→G | L90P (CTG→CCG) | ygeD ← | putative resistance protein |
RA | 2,975,807 | A→G | L372P (CTG→CCG) | lysA ← | diaminopimelate decarboxylase |
RA | 2,977,219 | T→C | H59H (CAT→CAC) | lysR → | LysR |
RA | 2,977,854 | T→C | L271P (CTG→CCG) | lysR → | LysR |
RA | 2,979,391 | T→C | T272A (ACC→GCC) | araE ← | low‑affinity L‑arabinose transport system proton symport protein |
RA | 2,986,892 | C→T | H123H (CAC→CAT) | yqeI → | putative sensory transducer |
RA | 2,991,845 | T→C | N62N (AAT→AAC) | b2853 → | hypothetical protein |
RA | 2,997,285 | (T)6→7 | coding (629/756 nt) | b2865 ← | putative lipoprotein |
RA | 2,997,977 | T→C | intergenic (‑64/‑390) | b2865 ← / → b2866 | putative lipoprotein/hypothetical protein |
RA | 2,999,913 | C→T | A516V (GCC→GTC) | b2866 → | hypothetical protein |
RA | 3,004,502 | T→C | R49R (CGT→CGC) | ygeW → | putative carbamoyl transferase |
RA | 3,005,399 | +C | coding (1044/1092 nt) | ygeW → | putative carbamoyl transferase |
RA | 3,008,642 | C→T | A198A (GCC→GCT) | b2873 → | hypothetical protein |
RA | 3,011,893 | G→A | A123V (GCG→GTG) | b2875 ← | putative synthases |
RA | 3,016,772 | T→C | C898R (TGC→CGC) | b2878 → | putative oxidoreductase Fe‑S subunit |
RA | 3,018,487 | C→T | R436C (CGT→TGT) | b2879 → | putative proteoglycan |
RA | 3,018,800 | T→C | F80F (TTT→TTC) | b2880 → | hypothetical protein |
RA | 3,019,825 | G→A | P163P (CCG→CCA) | b2881 → | putative dehydrogenase |
RA | 3,025,603 | T→C | G154G (GGT→GGC) | ygfQ → | hypothetical protein |
RA | 3,025,676 | +C | coding (535/570 nt) | ygfQ → | hypothetical protein |
RA | 3,026,063 | A→G | D129G (GAC→GGC) | ygfR → | putative oxidoreductase |
RA | 3,027,430 | A→G | F513L (TTC→CTC) | ygfT ← | putative oxidoreductase Fe‑S subunit |
RA | 3,032,284 | T→C | D304G (GAT→GGT) | lysS ← | lysine tRNA synthetase |
RA | 3,036,938 | T→C | T276A (ACG→GCG) | xerD ← | XerD |
RA | 3,046,045 | T→C | V339V (GTA→GTG) | gcvP ← | glycine decarboxylase |
RA | 3,047,558 | T→C | V4V (GTA→GTG) | gcvH ← | GcvH |
RA | 3,049,165 | T→C | G391G (GGA→GGG) | visC ← | hypothetical protein |
RA | 3,055,697 | T→C | D245G (GAT→GGT) | serA ← | D‑3‑phosphoglycerate dehydrogenase |
RA | 3,064,509 | T→C | M229V (ATG→GTG) | b2921 ← | putative transcriptional regulator LYSR‑type |
RA | 3,073,511 | A→G | L231P (CTG→CCG) | yggF ← | hypothetical protein |
RA | 3,073,702 | A→G | S167S (AGT→AGC) | yggF ← | hypothetical protein |
RA | 3,075,220 | (T)5→6 | coding (256/357 nt) | yggP ← | hypothetical protein |
RA | 3,077,514 | Δ1 bp | intergenic (‑165/+149) | cmtB ← / ← tktA | PTS system mannitol‑specific enzyme IIA component/transketolase 1 isozyme |
RA | 3,077,640 | +G | intergenic (‑291/+23) | cmtB ← / ← tktA | PTS system mannitol‑specific enzyme IIA component/transketolase 1 isozyme |
RA | 3,077,905 | A→G | S584P (TCG→CCG) | tktA ← | transketolase 1 isozyme |
RA | 3,078,221 | C→T | Q478Q (CAG→CAA) | tktA ← | transketolase 1 isozyme |
RA | 3,078,245 | C→G | G470G (GGG→GGC) | tktA ← | transketolase 1 isozyme |
RA | 3,079,142 | A→G | G171G (GGT→GGC) | tktA ← | transketolase 1 isozyme |
RA | 3,082,961 | A→G | S324P (TCC→CCC) | speA ← | biosynthetic arginine decarboxylase |
RA | 3,083,359 | T→C | H191R (CAC→CGC) | speA ← | biosynthetic arginine decarboxylase |
RA | 3,089,241 | G→A | R30H (CGC→CAC) | b2946 → | hypothetical protein |
RA | 3,091,676 | A→G | Q53R (CAG→CGG) | yqgF → | hypothetical protein |
RA | 3,099,661 | (A)5→6 | intergenic (‑19/+164) | yggN ← / ← b2959 | hypothetical protein/hypothetical protein |
RA | 3,099,727 | T→C | intergenic (‑85/+98) | yggN ← / ← b2959 | hypothetical protein/hypothetical protein |
RA | 3,100,603 | A→G | F90L (TTC→CTC) | yggH ← | hypothetical protein |
RA | 3,107,469 | +C | intergenic (‑296/‑101) | b2965 ← / → yqgA | ornithine decarboxylase isozyme/putative transport protein |
RA | 3,108,438 | C→A | noncoding (56/76 nt) | pheV → | tRNA‑Phe |
RA | 3,112,040 | T→C | A110A (GCA→GCG) | b2972 ← | putative peptidase |
RA | 3,112,176 | T→C | H65R (CAC→CGC) | b2972 ← | putative peptidase |
RA | 3,114,328 | A→T | G262G (GGT→GGA) | b2973 ← | hypothetical protein |
RA | 3,115,116 | +C | coding (2013/2028 nt) | b2974 ← | putative endoglucanase |
RA | 3,117,133 | A→G | intergenic (‑5/+480) | b2974 ← / ← yghK | putative endoglucanase/putative permease |
RA | 3,123,585 | +G | coding (953/2286 nt) | glcF ← | glycolate oxidase iron‑sulfur subunit |
RA | 3,125,293 | T→C | G248G (GGA→GGG) | glcD ← | glycolate oxidase subunit D |
RA | 3,125,359 | T→C | K226K (AAA→AAG) | glcD ← | glycolate oxidase subunit D |
RA | 3,127,469 | G→A | G254G (GGC→GGT) | b2981 ← | hypothetical protein |
RA | 3,129,641 | C→T | V261V (GTG→GTA) | b2983 ← | hypothetical protein |
RA | 3,130,334 | A→G | V30V (GTT→GTC) | b2983 ← | hypothetical protein |
RA | 3,141,722 | A→G | L153P (CTG→CCG) | hybB ← | putative cytochrome Ni/Fe component of hydrogenase‑2 |
RA | 3,145,571 | A→G | intergenic (‑819/‑341) | b2998 ← / → b3001 | hypothetical protein/putative reductase |
RA | 3,152,247 | +C | intergenic (+10/+29) | yghB → / ← yqhC | hypothetical protein/putative ARAC‑type regulatory protein |
MC JC | 3,156,257 | (CCA)2→1 | coding (594‑596/930 nt) | yqhG → | hypothetical protein |
RA | 3,157,790 | G→A | C457C (TGC→TGT) | ygiRQ ← | Fe‑S oxidoreductase |
RA | 3,158,202 | +C | coding (961/975 nt) | ygiRQ ← | Fe‑S oxidoreductase |
RA | 3,159,481 | A→G | M402T (ATG→ACG) | sufI ← | suppressor of ftsI |
RA | 3,160,251 | A→G | T145T (ACT→ACC) | sufI ← | suppressor of ftsI |
RA | 3,162,333 | A→G | Y553H (TAT→CAT) | parC ← | DNA topoisomerase IV subunit A |
RA | 3,164,677 | T→C | K353R (AAG→AGG) | b3020 ← | putative transport periplasmic protein |
RA | 3,166,935 | 2 bp→CG | coding (312‑313/483 nt) | b3023 ← | hypothetical protein |
RA | 3,175,525 | (C)6→7 | coding (402/630 nt) | yqiE ← | hypothetical protein |
RA | 3,183,028 | T→C | V70A (GTC→GCC) | b3042 → | hypothetical protein |
RA | 3,184,181 | (T)5→6 | intergenic (+200/‑22) | ygiL → / → yi215 | putative fimbrial‑like protein/IS2 hypothetical protein |
RA | 3,185,776 | T→C | F121L (TTC→CTC) | yqiG → | putative membrane protein |
RA | 3,185,807 | T→C | F131S (TTT→TCT) | yqiG → | putative membrane protein |
RA | 3,186,089 | T→C | I225T (ATC→ACC) | yqiG → | putative membrane protein |
RA | 3,186,266 | T→C | V284A (GTC→GCC) | yqiG → | putative membrane protein |
RA | 3,188,237 | T→C | V114A (GTG→GCG) | b3047 → | putative membrane protein |
RA | 3,191,015 | G→A | G46S (GGT→AGT) | b3051 → | putative membrane protein |
RA | 3,198,625 | A→G | intergenic (‑19/‑223) | ygiF ← / → ygiM | hypothetical protein/hypothetical protein |
RA | 3,201,729 | A→G | V15A (GTG→GCG) | bacA ← | BacA |
RA | 3,202,607 | T→C | C91C (TGT→TGC) | ygiH → | hypothetical protein |
RA | 3,208,639 | T→C | intergenic (+2/‑109) | rpsU → / → dnaG | 30S ribosomal subunit protein S21/DNA primase |
RA | 3,210,743 | A→G | Q19R (CAA→CGA) | rpoD → | RNA polymerase sigma(70) |
RA | 3,210,945 | C→T | S86S (AGC→AGT) | rpoD → | RNA polymerase sigma(70) |
RA | 3,211,779 | T→C | R364R (CGT→CGC) | rpoD → | RNA polymerase sigma(70) |
RA | 3,212,918 | A→G | V66A (GTC→GCC) | ygjF ← | hypothetical protein |
RA | 3,215,450 | T→C | Q423R (CAG→CGG) | aer ← | Aer |
RA | 3,219,876 | G→A | G257D (GGC→GAC) | ebgR → | EbgR |
RA | 3,221,097 | 2 bp→GC | coding (824‑825/3093 nt) | b3076 → | evolved beta‑D‑galactosidase alpha subunit |
RA | 3,221,280 | T→C | L336P (CTG→CCG) | b3076 → | evolved beta‑D‑galactosidase alpha subunit |
RA | 3,222,944 | 4 bp→AGCA | coding (2671‑2674/3093 nt) | b3076 → | evolved beta‑D‑galactosidase alpha subunit |
RA | 3,223,631 | A→G | E90G (GAA→GGA) | ebgC → | evolved beta‑D‑galactosidase beta subunit |
RA | 3,224,879 | Δ1 bp | coding (1005/1434 nt) | ygjI → | putative oxidoreductase |
RA | 3,224,926 | +C | coding (1052/1434 nt) | ygjI → | putative oxidoreductase |
RA | 3,228,614 | G→A | A696T (GCT→ACT) | ygjK → | putative isomerase |
RA | 3,233,455 | T→C | D21G (GAC→GGC) | b3084 ← | hypothetical protein |
RA | 3,236,177 | Δ1 bp | intergenic (+239/‑45) | ygjR → / → ygjT | hypothetical protein/putative transport protein |
RA | 3,236,735 | +C | coding (514/966 nt) | ygjT → | putative transport protein |
RA | 3,236,758 | Δ1 bp | coding (537/966 nt) | ygjT → | putative transport protein |
RA | 3,237,242 | +C | intergenic (+55/‑342) | ygjT → / → ygjU | putative transport protein/putative transport protein |
RA | 3,237,247 | +C | intergenic (+60/‑337) | ygjT → / → ygjU | putative transport protein/putative transport protein |
RA | 3,237,258 | A→G | intergenic (+71/‑326) | ygjT → / → ygjU | putative transport protein/putative transport protein |
RA | 3,243,762 | T→C | V340A (GTT→GCT) | exuT → | ExuT |
RA | 3,251,140 | G→C | L239V (CTT→GTT) | yhaJ ← | putative transcriptional regulator LYSR‑type |
RA | 3,251,675 | A→G | R60R (CGT→CGC) | yhaJ ← | putative transcriptional regulator LYSR‑type |
RA | 3,253,742 | Δ1 bp | coding (551/552 nt) | yhaNM ← | hypothetical protein |
RA | 3,253,781 | T→C | E171G (GAG→GGG) | yhaNM ← | hypothetical protein |
RA | 3,255,594 | Δ1 bp | coding (4/1278 nt) | yhaO ← | putative transport system permease protein |
RA | 3,255,616 | Δ1 bp | intergenic (‑19/+312) | yhaO ← / ← yhaP | putative transport system permease protein/putative L‑serine dehydratase |
RA | 3,255,885 | (A)8→7 | intergenic (‑288/+43) | yhaO ← / ← yhaP | putative transport system permease protein/putative L‑serine dehydratase |
RA | 3,256,893 | +C | coding (405/423 nt) | yhaQ ← | putative L‑serine dehydratase |
RA | 3,257,838 | +G | coding (2222/2241 nt) | tdcE ← | putative formate acetyltransferase 3 |
RA | 3,257,952 | T→C | D703G (GAT→GGT) | tdcE ← | putative formate acetyltransferase 3 |
RA | 3,262,944 | G→A | R242R (CGC→CGT) | tdcB ← | threonine dehydratase |
RA | 3,263,134 | A→G | V179A (GTG→GCG) | tdcB ← | threonine dehydratase |
RA | 3,263,328 | T→C | V114V (GTA→GTG) | tdcB ← | threonine dehydratase |
RA | 3,266,308 | T→C | S85P (TCT→CCT) | yhaC → | hypothetical protein |
RA | 3,279,197 | A→C | R145S (AGA→AGC) | agaA → | putative N‑acetylgalactosamine‑6‑phosphate deacetylase |
RA | 3,284,393 | A→G | E161E (GAA→GAG) | agaI → | putative galactosamine‑6‑phosphate isomerase |
RA | 3,286,677 | A→G | T75A (ACT→GCT) | yraJ → | putative outer membrane protein |
RA | 3,289,431 | T→C | G150G (GGT→GGC) | yraK → | putative fimbrial protein |
RA | 3,289,828 | G→A | V283I (GTA→ATA) | yraK → | putative fimbrial protein |
RA | 3,295,175 | T→C | Q202R (CAG→CGG) | yraQ ← | hypothetical protein |
RA | 3,298,707 | T→C | T71A (ACC→GCC) | yhbT ← | hypothetical protein |
RA | 3,300,625 | G→A | V172I (GTC→ATC) | yhbV → | hypothetical protein |
RA | 3,304,194 | A→G | R453R (CGT→CGC) | deaD ← | inducible ATP‑independent RNA helicase |
RA | 3,305,090 | C→T | D155N (GAC→AAC) | deaD ← | inducible ATP‑independent RNA helicase |
RA | 3,305,887 | T→C | T227A (ACC→GCC) | yhbM ← | putative control proteins |
RA | 3,309,164 | A→G | R54R (CGT→CGC) | rpsO ← | 30S ribosomal subunit protein S15 |
RA | 3,316,316 | T→C | R13R (CGT→CGC) | argG → | argininosuccinate synthetase |
RA | 3,316,615 | T→C | M113T (ATG→ACG) | argG → | argininosuccinate synthetase |
RA | 3,321,028 | A→G | R228R (CGT→CGC) | mrsA ← | MrsA |
RA | 3,327,704 | (C)5→6 | coding (1101/1434 nt) | dacB → | D‑alanyl‑D‑alanine carboxypeptidase fraction B |
RA | 3,333,953 | A→G | G61G (GGT→GGC) | murA ← | UDP‑N‑glucosamine 1‑carboxyvinyltransferase |
RA | 3,334,354 | T→C | I36V (ATT→GTT) | yrbA ← | hypothetical protein |
RA | 3,337,699 | T→C | Q3R (CAG→CGG) | yrbF ← | putative ATP‑binding component of a transport system |
RA | 3,339,304 | +C | coding (398/987 nt) | yrbH → | putative isomerase |
RA | 3,339,422 | T→C | D172D (GAT→GAC) | yrbH → | putative isomerase |
RA | 3,339,701 | C→T | G265G (GGC→GGT) | yrbH → | putative isomerase |
RA | 3,340,190 | A→G | T93A (ACT→GCT) | yrbI → | hypothetical protein |
RA | 3,351,337 | T→C | T117A (ACC→GCC) | yhcC ← | hypothetical protein |
RA | 3,352,254 | 2 bp→GC | intergenic (‑569/‑12) | yhcC ← / → gltB | hypothetical protein/glutamate synthase large subunit |
RA | 3,352,410 | C→T | I48I (ATC→ATT) | gltB → | glutamate synthase large subunit |
RA | 3,353,950 | A→G | T562A (ACC→GCC) | gltB → | glutamate synthase large subunit |
RA | 3,356,616 | T→C | A1450A (GCT→GCC) | gltB → | glutamate synthase large subunit |
RA | 3,358,838 | G→A | A10T (GCT→ACT) | gltF → | GltF |
RA | 3,359,299 | T→C | G163G (GGT→GGC) | gltF → | GltF |
RA | 3,362,693 | T→C | L751P (CTC→CCC) | yhcD → | putative outer membrane protein |
RA | 3,365,636 | A→G | R59G (AGG→GGG) | yhcG → | hypothetical protein |
RA | 3,366,054 | A→G | H198R (CAC→CGC) | yhcG → | hypothetical protein |
RA | 3,367,240 | T→C | Y249C (TAT→TGT) | yhcI ← | putative NAGC‑like transcriptional regulator |
RA | 3,370,778 | A→G | V145A (GTA→GCA) | nanA ← | N‑acetylneuraminate lyase |
RA | 3,374,263 | T→C | Q50R (CAA→CGA) | sspB ← | stringent starvation protein B |
RA | 3,374,589 | A→G | L156P (CTG→CCG) | sspA ← | stringent starvation protein A |
RA | 3,383,369 | C→T | T83M (ACG→ATG) | yhcN → | hypothetical protein |
RA | 3,383,404 | A→G | T95A (ACC→GCC) | yhcN → | hypothetical protein |
RA | 3,389,812 | Δ1 bp | intergenic (‑149/+4151) | tldD ← / ← cafA | TldD/CafA |
RA | 3,393,106 | Δ1 bp | intergenic (‑3443/+857) | tldD ← / ← cafA | TldD/CafA |
RA | 3,393,906 | T→C | intergenic (‑4243/+57) | tldD ← / ← cafA | TldD/CafA |
RA | 3,403,945 | T→C | V131A (GTA→GCA) | accC → | acetyl CoA carboxylase |
RA | 3,405,469 | T→C | W76R (TGG→CGG) | b3258 → | sodium/pantothenate symporter |
RA | 3,407,232 | G→A | A176T (GCG→ACG) | prmA → | PrmA |
RA | 3,410,192 | T→C | intergenic (+18/‑66) | b3262 → / → yhdU | putative methyltransferase/hypothetical protein |
RA | 3,410,534 | (G)5→6 | coding (569/663 nt) | envR ← | putative transcriptional regulator |
RA | 3,411,069 | T→C | T12A (ACC→GCC) | envR ← | putative transcriptional regulator |
RA | 3,414,746 | G→A | A693T (GCC→ACC) | acrF → | AcrF |
RA | 3,418,628 | A→G | A286A (GCA→GCG) | b3269 → | putative transport system permease protein |
RA | 3,418,840 | +G | coding (1070/1089 nt) | b3269 → | putative transport system permease protein |
RA | 3,421,120 | Δ1 bp | noncoding (60/121 nt) | rrfF ← | 5S ribosomal RNA |
RA | 3,427,261 | T→C | V130A (GTC→GCC) | b3279 → | putative transferase |
RA | 3,428,098 | G→A | G126G (GGC→GGT) | aroE ← | dehydroshikimate reductase |
RA | 3,429,527 | Δ1 bp | coding (40/510 nt) | yrdD ← | putative DNA topoisomerase |
RA | 3,430,453 | +C | coding (745/747 nt) | smf ← | putative Rossmann‑fold nucleotide‑binding protein |
RA | 3,434,055 | A→G | P404P (CCA→CCG) | sun → | hypothetical protein |
RA | 3,439,191 | T→C | H41R (CAC→CGC) | rpsD ← | 30S ribosomal subunit protein S4 |
RA | 3,450,109 | G→A | P152L (CCG→CTG) | rplC ← | 50S ribosomal subunit protein L3 |
RA | 3,454,538 | T→C | N175N (AAT→AAC) | b3325 → | YheF |
RA | 3,456,098 | A→G | Q41Q (CAA→CAG) | yheG → | YheG |
RA | 3,463,677 | C→T | G166G (GGC→GGT) | hofD → | leader peptidase |
RA | 3,471,960 | T→C | H77R (CAC→CGC) | rpsL ← | 30S ribosomal subunit protein S12 |
RA | 3,472,167 | A→C | V8G (GTA→GGA) | rpsL ← | 30S ribosomal subunit protein S12 |
RA | 3,475,807 | T→C | T110A (ACT→GCT) | slyD ← | FKBP‑type peptidyl‑prolyl cis‑trans isomerase |
RA | 3,484,054 | T→C | Y100H (TAC→CAC) | crp → | cyclic AMP receptor protein |
RA | 3,486,661 | T→C | D386G (GAT→GGT) | argD ← | acetylornithine delta‑aminotransferase |
RA | 3,490,327 | T→C | P41P (CCT→CCC) | yhfC → | putative transport |
RA | 3,494,690 | A→G | A17A (GCA→GCG) | nirC → | Nitrite transporter |
RA | 3,496,430 | T→C | I322I (ATT→ATC) | cysG → | uroporphyrinogen III methylase |
RA | 3,496,451 | T→C | G329G (GGT→GGC) | cysG → | uroporphyrinogen III methylase |
RA | 3,497,141 | A→G | A19A (GCA→GCG) | yhfL → | hypothetical protein |
RA | 3,500,309 | Δ1 bp | coding (333/363 nt) | b3372 → | hypothetical protein |
RA | 3,507,831 | T→C | T262A (ACT→GCT) | yhfX ← | hypothetical protein |
RA | 3,509,089 | T→C | N5S (AAC→AGC) E225E (GAA→GAG) |
yhfY ← yhfZ ← |
hypothetical protein hypothetical protein |
RA | 3,509,958 | Δ1 bp | intergenic (‑195/+314) | yhfZ ← / ← trpS | hypothetical protein/tryptophan tRNA synthetase |
RA | 3,510,121 | +G | intergenic (‑358/+151) | yhfZ ← / ← trpS | hypothetical protein/tryptophan tRNA synthetase |
RA | 3,525,330 | T→C | T408T (ACT→ACC) | yrfF → | putative dehydrogenase |
RA | 3,533,160 | A→G | L116P (CTG→CCG) | envZ ← | protein histidine kinase |
RA | 3,537,405 | +GC | intergenic (+61/‑394) | b3407 → / → feoA | hypothetical protein/ferrous iron transport protein A |
RA | 3,539,774 | G→A | A578T (GCC→ACC) | feoB → | ferrous iron transport protein B |
RA | 3,544,357 | +G | coding (163/1314 nt) | gntT → | gluconate permease |
RA | 3,544,360 | +G | coding (166/1314 nt) | gntT → | gluconate permease |
RA | 3,544,363 | +C | coding (169/1314 nt) | gntT → | gluconate permease |
RA | 3,544,971 | T→C | G259G (GGT→GGC) | gntT → | gluconate permease |
RA | 3,548,005 | C→T | G701D (GGT→GAT) | malP ← | maltodextrin phosphorylase |
RA | 3,554,088 | +C | coding (2/624 nt) | yhgKJ ← | RNA phosphage cyclase |
RA | 3,554,113 | Δ1 bp | coding (372/396 nt) | yhgKJ ← | RNA phosphage cyclase |
RA | 3,554,118 | +C | coding (367/396 nt) | yhgKJ ← | RNA phosphage cyclase |
RA | 3,556,990 | G→A | R364H (CGC→CAC) | rtcR → | putative 2‑component regulator |
RA | 3,558,932 | 2 bp→GC | coding (153‑154/831 nt) | glpG ← | GlpG |
RA | 3,566,875 | A→G | R29R (CGT→CGC) | glgC ← | glucose‑1‑phosphate adenylyltransferase |
RA | 3,572,116 | G→A | G132G (GGC→GGT) | asd ← | aspartate‑semialdehyde dehydrogenase |
RA | 3,572,523 | (T)7→6 | intergenic (‑12/‑181) | asd ← / → yhgN | aspartate‑semialdehyde dehydrogenase/hypothetical protein |
RA | 3,573,700 | +C | intergenic (+403/+997) | yhgN → / ← gntK | hypothetical protein/gluconokinase 2 |
RA | 3,574,513 | T→C | intergenic (+1216/+184) | yhgN → / ← gntK | hypothetical protein/gluconokinase 2 |
RA | 3,575,446 | +G | coding (912/942 nt) | gntR ← | GntR |
RA | 3,579,597 | A→G | H35R (CAT→CGT) | yhhZ → | hypothetical protein |
RA | 3,582,668 | G→A | L93L (TTG→TTA) | yrhB → | hypothetical protein |
RA | 3,586,561 | T→C | N97S (AAC→AGC) | ugpC ← | ATP‑binding component of sn‑glycerol 3‑phosphate transport system |
RA | 3,588,897 | A→G | Y354H (TAT→CAT) | ugpB ← | UgpB |
RA | 3,590,502 | A→G | T189T (ACT→ACC) | b3454 ← | ATP‑binding component of leucine transport |
RA | 3,595,797 | A→G | G61G (GGA→GGG) | yhhK → | hypothetical protein |
RA | 3,596,295 | A→G | V332A (GTG→GCG) | b3460 ← | LivJ |
RA | 3,597,072 | T→C | D73G (GAC→GGC) | b3460 ← | LivJ |
RA | 3,597,539 | T→C | intergenic (‑250/+21) | b3460 ← / ← rpoH | LivJ/sigma(32) factor |
RA | 3,602,962 | A→G | Y94H (TAC→CAC) | yhhM ← | putative receptor |
RA | 3,604,090 | T→C | T3T (ACT→ACC) | zntA → | zinc‑transporting ATPase |
RA | 3,604,952 | T→C | S291P (TCC→CCC) | zntA → | zinc‑transporting ATPase |
RA | 3,609,699 | A→G | V68V (GTA→GTG) | b3474 → | hypothetical protein |
RA | 3,614,182 | T→C | F124L (TTC→CTC) | nikC → | NikC |
RA | 3,620,852 | A→G | T1344A (ACT→GCT) | rhsB → | RhsB |
RA | 3,621,415 | T→C | intergenic (+2/‑594) | yhhH → / → yhhI | hypothetical protein/putative receptor |
RA | 3,623,435 | T→C | I334V (ATC→GTC) | b3485 ← | putative transporter |
RA | 3,624,135 | A→G | N100N (AAT→AAC) | b3485 ← | putative transporter |
RA | 3,624,700 | T→C | I807V (ATT→GTT) | yhiH ← | putative ATP‑binding component of a transport system, fragment 1 |
RA | 3,627,142 | +G | intergenic (‑24/+23) | yhiH ← / ← yhiI | putative ATP‑binding component of a transport system, fragment 1/putative membrane protein |
RA | 3,628,759 | G→A | R488C (CGT→TGT) | yhiJ ← | hypothetical protein |
RA | 3,634,228 | A→G | R271R (CGT→CGC) | yhiN ← | hypothetical protein |
RA | 3,637,944 | T→C | H68H (CAT→CAC) | uspA → | universal stress protein |
RA | 3,638,599 | A→G | V36V (GTA→GTG) | yhiP → | putative transport protein |
RA | 3,638,755 | A→G | A88A (GCA→GCG) | yhiP → | putative transport protein |
RA | 3,648,042 | T→C | L59P (CTG→CCG) | arsC → | arsenate reductase |
RA | 3,649,511 | G→A | E197E (GAG→GAA) | yhiS → | hypothetical protein |
RA | 3,660,679 | T→C | L879P (CTG→CCG) | yhiV → | putative transport system permease protein |
RA | 3,665,586 | T→C | A411A (GCA→GCG) | yhjA ← | putative cytochrome C peroxidase |
RA | 3,666,629 | T→C | T64A (ACG→GCG) | yhjA ← | putative cytochrome C peroxidase |
RA | 3,670,614 | C→T | R215C (CGT→TGT) | yhjC → | putative transcriptional regulator LYSR‑type |
RA | 3,674,040 | A→G | G652G (GGT→GGC) | yhjG ← | hypothetical protein |
RA | 3,678,204 | G→A | P456L (CCG→CTG) | yhjJ ← | hypothetical protein |
RA | 3,679,306 | T→C | S89G (AGC→GGC) | yhjJ ← | hypothetical protein |
RA | 3,683,091 | A→G | V42A (GTC→GCC) | yhjK ← | hypothetical protein |
RA | 3,683,927 | G→A | N942N (AAC→AAT) | b3530 ← | putative oxidoreductase subunit |
RA | 3,686,775 | +T | intergenic (‑23/+9) | b3530 ← / ← yhjM | putative oxidoreductase subunit/putative endoglucanase |
RA | 3,698,466 | A→G | N92S (AAC→AGC) | yhjV → | putative transporter protein |
RA | 3,703,602 | 2 bp→GC | intergenic (‑183/+124) | dppB ← / ← dppA | dipeptide transport system permease protein 1/dipeptide transport protein |
RA | 3,704,229 | (T)5→4 | coding (1106/1608 nt) | dppA ← | dipeptide transport protein |
RA | 3,704,865 | T→C | K157R (AAG→AGG) | dppA ← | dipeptide transport protein |
RA | 3,705,464 | T→C | intergenic (‑130/+781) | dppA ← / ← proK | dipeptide transport protein/tRNA‑Pro |
RA | 3,707,190 | (C)6→5 | coding (948/1725 nt) | yhjW ← | hypothetical protein |
RA | 3,707,913 | A→G | R75R (CGT→CGC) | yhjW ← | hypothetical protein |
RA | 3,714,436 | 2 bp→GC | coding (261‑262/660 nt) | yiaD → | putative outer membrane protein |
RA | 3,720,299 | A→G | A576A (GCT→GCC) | glyS ← | glycine tRNA synthetase beta subunit |
RA | 3,724,581 | T→C | Q137R (CAG→CGG) | yiaA ← | hypothetical protein |
RA | 3,725,180 | G→A | I70I (ATC→ATT) | yiaB ← | hypothetical protein |
RA | 3,725,633 | T→C | L456L (CTA→CTG) | xylB ← | xylulokinase |
RA | 3,725,747 | (C)8→9 | coding (1254/1455 nt) | xylB ← | xylulokinase |
RA | 3,730,104 | T→C | L92P (CTG→CCG) | xylG → | putative ATP‑binding protein of xylose transport system |
RA | 3,731,386 | T→C | V13A (GTA→GCA) | xylH → | XylH |
RA | 3,734,264 | 2 bp→GC | coding (542‑543/825 nt) | bax ← | putative ATP‑binding protein |
RA | 3,735,415 | G→A | R97H (CGC→CAC) | malS → | alpha‑amylase |
RA | 3,737,956 | 2 bp→CG | coding (623‑624/1254 nt) | avtA → | alanine‑alpha‑ketoisovalerate transaminase |
RA | 3,739,740 | A→G | M141T (ATG→ACG) | yiaJ ← | putative regulator |
RA | 3,740,514 | T→C | R51R (CGT→CGC) | yiaK → | putative dehydrogenase |
RA | 3,743,603 | Δ1 bp | coding (1171/1275 nt) | yiaN → | putative membrane protein |
RA | 3,744,796 | G→A | G28D (GGC→GAC) | lyxK → | L‑xylulose kinase |
RA | 3,744,958 | G→A | G82E (GGA→GAA) | lyxK → | L‑xylulose kinase |
RA | 3,745,316 | C→T | I201I (ATC→ATT) | lyxK → | L‑xylulose kinase |
RA | 3,747,858 | A→G | Y48C (TAC→TGC) | sgbE → | putative epimerase/aldolase |
RA | 3,749,710 | T→C | L30P (CTT→CCT) | yiaU → | putative transcriptional regulator LYSR‑type |
RA | 3,754,310 | C→A | R382M (AGG→ATG) | yiaY ← | putative oxidoreductase |
JC | 3,754,317 | +GCG | coding (1138/1149 nt) | yiaY ← | putative oxidoreductase |
RA | 3,755,517 | T→C | intergenic (‑63/+127) | yiaY ← / ← selB | putative oxidoreductase/selenocysteinyl‑tRNA‑specific translation factor |
RA | 3,765,203 | A→T | Q119L (CAG→CTG) | yibJ → | hypothetical protein |
RA | 3,765,234 | G→A | G129G (GGG→GGA) | yibJ → | hypothetical protein |
RA | 3,772,157 | T→C | V36A (GTA→GCA) | mtlD → | mannitol‑1‑phosphate dehydrogenase |
RA | 3,774,290 | A→G | intergenic (‑283/‑2) | b4550 ← / → yibL | hypothetical protein/hypothetical protein |
RA | 3,775,779 | A→G | I252V (ATT→GTT) | lldP → | L‑lactate permease |
RA | 3,776,340 | G→A | G439S (GGT→AGT) | lldP → | L‑lactate permease |
RA | 3,778,658 | (C)5→4 | intergenic (+14/‑184) | lldD → / → yibK | L‑lactate dehydrogenase/hypothetical protein |
RA | 3,785,382 | G→A | T306T (ACG→ACA) | b3613 → | putative membrane protein |
RA | 3,786,097 | A→G | M124V (ATG→GTG) | b3614 → | hypothetical protein |
RA | 3,786,415 | A→G | T230A (ACG→GCG) | b3614 → | hypothetical protein |
RA | 3,787,263 | C→G | G149A (GGC→GCC) | yibD ← | putative regulator |
RA | 3,787,906 | A→G | intergenic (‑198/+41) | yibD ← / ← tdh | putative regulator/threonine dehydrogenase |
RA | 3,791,507 | T→C | intergenic (‑182/‑107) | htrL ← / → rfaD | HtrL/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase |
RA | 3,792,026 | A→G | N138S (AAC→AGC) | rfaD → | ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase |
RA | 3,793,037 | A→G | Q161R (CAG→CGG) | rfaF → | ADP‑heptose‑‑lps heptosyltransferase II |
RA | 3,795,233 | T→C | L220P (CTG→CCG) | rfaL → | O‑antigen ligase |
RA | 3,795,982 | A→G | S320P (TCC→CCC) | rfaK ← | putative hexose transferase |
RA | 3,800,657 | T→C | E10G (GAG→GGG) | rfaI ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase |
RA | 3,802,880 | A→G | M233T (ATG→ACG) | rfaP ← | RfaP |
RA | 3,804,224 | A→G | T157T (ACT→ACC) | rfaG ← | glucosyltransferase I |
RA | 3,804,546 | T→C | E50G (GAG→GGG) | rfaG ← | glucosyltransferase I |
RA | 3,806,424 | G→A | T86T (ACG→ACA) | kdtA → | 3‑deoxy‑D‑manno‑octulosonic‑acid transferase |
RA | 3,806,842 | C→T | R226C (CGC→TGC) | kdtA → | 3‑deoxy‑D‑manno‑octulosonic‑acid transferase |
RA | 3,812,035 | G→A | intergenic (+21/‑86) | dut → / → b3641 | deoxyuridinetriphosphatase/putative transcriptional regulator |
RA | 3,812,423 | T→C | R101R (CGT→CGC) | b3641 → | putative transcriptional regulator |
RA | 3,814,809 | A→G | K169K (AAA→AAG) | yicC → | putative alpha helix protein |
RA | 3,816,555 | (G)5→6 | coding (55/618 nt) | b3646 → | hypothetical protein |
RA | 3,817,156 | T→C | S550G (AGT→GGT) | yicF ← | hypothetical protein |
RA | 3,819,792 | A→G | V20V (GTA→GTG) | rpoZ → | RNA polymerase omega subunit |
RA | 3,822,652 | T→C | Y171H (TAC→CAC) | spoU → | putative RNA methylase |
RA | 3,822,805 | T→C | W222R (TGG→CGG) | spoU → | putative RNA methylase |
RA | 3,827,834 | C→T | G421G (GGC→GGT) | yicE → | putative transport protein |
RA | 3,828,674 | T→C | T197T (ACT→ACC) | yicH → | hypothetical protein |
RA | 3,829,419 | C→T | R446C (CGC→TGC) | yicH → | hypothetical protein |
RA | 3,837,057 | G→A | L188L (CTC→CTT) | nlpA ← | lipoprotein‑28 |
RA | 3,838,693 | A→G | I280T (ATC→ACC) | yicM ← | putative transport protein |
RA | 3,841,014 | A→G | Y161H (TAC→CAC) | yicO ← | hypothetical protein |
RA | 3,843,432 | (T)7→8 | coding (1363/1392 nt) | uhpT ← | hexose phosphate transport protein |
RA | 3,845,193 | G→A | T354T (ACC→ACT) | uhpC ← | UhpC |
RA | 3,847,265 | A→G | W167R (TGG→CGG) | b3668 ← | sensor histidine protein kinase |
RA | 3,847,491 | T→C | L91L (TTA→TTG) | b3668 ← | sensor histidine protein kinase |
RA | 3,849,668 | G→A | G248G (GGC→GGT) | ilvB ← | acetolactate synthase I large subunit |
RA | 3,850,058 | G→A | G118G (GGC→GGT) | ilvB ← | acetolactate synthase I large subunit |
RA | 3,851,411 | A→G | intergenic (‑796/‑132) | ivbL ← / → emrD | ilvB operon leader peptide/2‑module integral membrane pump |
RA | 3,851,510 | T→C | intergenic (‑895/‑33) | ivbL ← / → emrD | ilvB operon leader peptide/2‑module integral membrane pump |
RA | 3,853,574 | T→C | R8R (AGA→AGG) | yidG ← | hypothetical protein |
RA | 3,857,264 | A→G | G160G (GGT→GGC) | yidK ← | putative cotransporter |
RA | 3,857,508 | T→C | E79G (GAA→GGA) | yidK ← | putative cotransporter |
RA | 3,857,968 | T→C | L30S (TTA→TCA) | yidL → | putative ARAC‑type regulatory protein |
RA | 3,858,839 | C→T | intergenic (+36/+137) | yidL → / ← glvG | putative ARAC‑type regulatory protein/putative 6‑phospho‑beta‑glucosidase |
RA | 3,860,862 | T→C | A123A (GCA→GCG) | b4553 ← | hypothetical protein |
RA | 3,862,488 | G→A | A471A (GCC→GCT) | yidE ← | putative transport protein |
RA | 3,863,429 | T→C | M158V (ATG→GTG) | yidE ← | putative transport protein |
RA | 3,869,012 | T→C | I116V (ATT→GTT) | b3691 ← | D‑galactonate transport |
RA | 3,870,631 | Δ1 bp | coding (610/1764 nt) | dgoA ← | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
RA | 3,870,765 | +G | coding (476/1764 nt) | dgoA ← | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
RA | 3,870,876 | Δ1 bp | coding (365/1764 nt) | dgoA ← | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
RA | 3,872,450 | +G | coding (338/387 nt) | yidW ← | regulator protein for dgo operon |
RA | 3,873,493 | T→C | C124C (TGT→TGC) | yidX → | putative replicase |
RA | 3,873,627 | Δ1 bp | coding (506/672 nt) | yidX → | putative replicase |
RA | 3,873,733 | G→A | R204R (CGG→CGA) | yidX → | putative replicase |
RA | 3,874,579 | A→G | M1T (ATG→ACG) † | yidA ← | hypothetical protein |
RA | 3,874,663 | (G)5→6 | intergenic (‑83/+32) | yidA ← / ← b3698 | hypothetical protein/hypothetical protein |
RA | 3,875,213 | T→C | intergenic (‑120/+120) | b3698 ← / ← gyrB | hypothetical protein/DNA gyrase subunit B |
RA | 3,875,855 | G→A | N631N (AAC→AAT) | gyrB ← | DNA gyrase subunit B |
RA | 3,876,595 | G→C | P385A (CCG→GCG) | gyrB ← | DNA gyrase subunit B |
RA | 3,881,483 | Δ1 bp | intergenic (‑126/‑482) | dnaA ← / → rpmH | DnaA/50S ribosomal subunit protein L34 |
RA | 3,883,067 | T→C | D121D (GAT→GAC) | yidC → | 60 KD inner‑membrane protein |
RA | 3,883,686 | G→A | V328I (GTT→ATT) | yidC → | 60 KD inner‑membrane protein |
RA | 3,886,722 | G→A | G122S (GGC→AGC) | b3708 → | tryptophanase |
RA | 3,888,869 | G→A | A335A (GCG→GCA) | tnaB → | low affinity tryptophan permease |
RA | 3,892,505 | T→C | G75G (GGT→GGC) | yieF → | hypothetical protein |
RA | 3,893,993 | A→G | A82A (GCT→GCC) | yieG ← | putative membrane/transport protein |
RA | 3,894,054 | G→T | A62D (GCC→GAC) | yieG ← | putative membrane/transport protein |
RA | 3,895,138 | T→C | S2P (TCT→CCT) | yieI → | hypothetical protein |
RA | 3,896,324 | +G | coding (698/711 nt) | b3718 ← | putative isomerase |
RA | 3,897,445 | T→C | N265S (AAC→AGC) | yieL ← | putative xylanase |
RA | 3,899,957 | (C)5→6 | coding (1373/1413 nt) | bglB ← | phospho‑beta‑glucosidase B |
RA | 3,899,975 | G→A | A452V (GCA→GTA) | bglB ← | phospho‑beta‑glucosidase B |
RA | 3,901,321 | T→G | A3A (GCA→GCC) | bglB ← | phospho‑beta‑glucosidase B |
RA | 3,902,432 | G→A | P265L (CCG→CTG) | bglF ← | PTS system beta‑glucosides‑specific enzyme IIABC component |
RA | 3,902,722 | G→A | G168G (GGC→GGT) | bglF ← | PTS system beta‑glucosides‑specific enzyme IIABC component |
RA | 3,904,345 | T→C | intergenic (‑150/+136) | bglG ← / ← phoU | BglG/PhoU |
RA | 3,905,748 | A→G | S83P (TCT→CCT) | pstB ← | ATP‑binding component of high‑affinity phosphate‑specific transport system |
RA | 3,907,388 | T→C | E213E (GAA→GAG) | pstC ← | PstC |
RA | 3,911,249 | G→A | I16I (ATC→ATT) | glmS ← | L‑glutamine:D‑fructose‑6‑phosphate aminotransferase |
RA | 3,911,767 | A→G | R354R (CGT→CGC) | glmU ← | N‑acetyl glucosamine‑1‑phosphate uridyltransferase |
RA | 3,912,542 | T→C | D96G (GAT→GGT) | glmU ← | N‑acetyl glucosamine‑1‑phosphate uridyltransferase |
RA | 3,913,076 | (G)6→7 | intergenic (‑248/+105) | glmU ← / ← atpC | N‑acetyl glucosamine‑1‑phosphate uridyltransferase/membrane‑bound ATP synthase, F1 sector, epsilon‑subunit |
RA | 3,914,878 | T→C | E42E (GAA→GAG) | atpD ← | membrane‑bound ATP synthase, F1 sector, beta‑subunit |
RA | 3,915,043 | G→C | A284G (GCC→GGC) | atpG ← | membrane‑bound ATP synthase, F1 sector, gamma‑subunit |
RA | 3,915,661 | T→C | Y78C (TAC→TGC) | atpG ← | membrane‑bound ATP synthase, F1 sector, gamma‑subunit |
RA | 3,916,382 | A→G | V368V (GTT→GTC) | atpA ← | membrane‑bound ATP synthase, F1 sector, alpha‑subunit |
RA | 3,917,055 | T→C | Q144R (CAG→CGG) | atpA ← | membrane‑bound ATP synthase, F1 sector, alpha‑subunit |
RA | 3,918,184 | G→A | A111A (GCC→GCT) | atpF ← | membrane‑bound ATP synthase, F0 sector, subunit b |
RA | 3,918,274 | T→C | K81K (AAA→AAG) | atpF ← | membrane‑bound ATP synthase, F0 sector, subunit b |
RA | 3,923,857 | T→C | Q76R (CAG→CGG) | mioC ← | MioC |
RA | 3,925,742 | T→C | A320A (GCT→GCC) | asnA → | asparagine synthetase A |
RA | 3,927,062 | +G | coding (2/1284 nt) coding (169/183 nt) |
yieM ← b4564 ← |
hypothetical protein hypothetical protein |
RA | 3,927,931 | C→T | A264T (GCC→ACC) | yieN ← | putative 2‑component regulator |
RA | 3,929,460 | T→C | M173T (ATG→ACG) | kup → | low affinity potassium transport system |
RA | 3,930,457 | Δ1 bp | coding (1515/1560 nt) | kup → | low affinity potassium transport system |
RA | 3,930,568 | +G | intergenic (+66/‑373) | kup → / → rbsD | low affinity potassium transport system/RbsD |
RA | 3,930,677 | +G | intergenic (+175/‑264) | kup → / → rbsD | low affinity potassium transport system/RbsD |
RA | 3,931,664 | A→G | E87E (GAA→GAG) | rbsA → | ATP‑binding component of D‑ribose high‑affinity transport system |
RA | 3,931,938 | T→C | S179P (TCC→CCC) | rbsA → | ATP‑binding component of D‑ribose high‑affinity transport system |
RA | 3,934,276 | C→T | H125Y (CAC→TAC) | rbsB → | D‑ribose periplasmic binding protein |
RA | 3,934,461 | A→G | P186P (CCA→CCG) | rbsB → | D‑ribose periplasmic binding protein |
RA | 3,934,526 | T→C | V208A (GTT→GCT) | rbsB → | D‑ribose periplasmic binding protein |
RA | 3,934,774 | A→G | K291E (AAA→GAA) | rbsB → | D‑ribose periplasmic binding protein |
RA | 3,934,842 | C→T | intergenic (+48/‑78) | rbsB → / → rbsK | D‑ribose periplasmic binding protein/ribokinase |
RA | 3,935,727 | C→T | P270S (CCA→TCA) | rbsK → | ribokinase |
RA | 3,937,523 | A→G | L239P (CTG→CCG) | yieO ← | putative transport protein |
RA | 3,938,374 | C→T | D145N (GAC→AAC) | yiePs ← | hypothetical protein |
JC | 3,938,587 | +TGC | coding (220/546 nt) | yiePs ← | hypothetical protein |
RA | 3,938,723 | C→T | R28R (CGG→CGA) | yiePs ← | hypothetical protein |
RA | 3,941,531 | T→C | noncoding (206/2906 nt) | rrlC → | 23S ribosomal RNA |
RA | 3,944,244 | C→A | intergenic (+13/‑80) | rrlC → / → rrfC | 23S ribosomal RNA/5S ribosomal RNA |
RA | 3,944,676 | 2 bp→GC | intergenic (+20/+75) | trpT → / ← yifDA | tRNA‑Trp/transcription regulator |
RA | 3,945,351 | +C | coding (1/600 nt) coding (240/240 nt) |
yifDA ← yifDA ← |
transcription regulator transcription regulator |
RA | 3,945,896 | T→C | V63A (GTA→GCA) | yifE → | hypothetical protein |
RA | 3,948,221 | A→G | A13A (GCA→GCG) | ilvG → | acetolactate synthase II large subunit |
RA | 3,949,187 | A→G | Q336R (CAG→CGG) | ilvG → | acetolactate synthase II large subunit |
RA | 3,950,224 | A→G | I40V (ATC→GTC) | ilvE → | branched‑chain amino‑acid aminotransferase |
RA | 3,950,557 | 2 bp→GC | coding (451‑452/930 nt) | ilvE → | branched‑chain amino‑acid aminotransferase |
JC | 3,951,167 | +GCG | coding (36/1818 nt) | ilvD → | dihydroxyacid dehydratase |
RA | 3,951,170 | Δ1 bp | coding (39/1818 nt) | ilvD → | dihydroxyacid dehydratase |
RA | 3,953,910 | A→G | N320S (AAC→AGC) | ilvA → | threonine deaminase |
RA | 3,957,092 | +CC | intergenic (+26/+58) | ilvC → / ← ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
RA | 3,957,124 | +G | intergenic (+58/+26) | ilvC → / ← ppiC | ketol‑acid reductoisomerase/peptidyl‑prolyl cis‑trans isomerase C |
RA | 3,957,165 | C→T | V89V (GTG→GTA) | ppiC ← | peptidyl‑prolyl cis‑trans isomerase C |
RA | 3,957,548 | 1 bp→GG | intergenic (‑117/‑744) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
RA | 3,957,551 | +T | intergenic (‑120/‑741) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
RA | 3,957,560 | +C | intergenic (‑129/‑732) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
JC | 3,958,260 | +CCC | intergenic (‑829/‑32) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
RA | 3,958,877 | 2 bp→CG | coding (586‑587/2022 nt) | rep → | rep helicase |
RA | 3,960,578 | 2 bp→CG | coding (1266‑1267/1485 nt) | gppA ← | guanosine pentaphosphatase |
RA | 3,961,588 | C→G | R86T (AGG→ACG) | gppA ← | guanosine pentaphosphatase |
RA | 3,961,605 | G→A | R80R (CGC→CGT) | gppA ← | guanosine pentaphosphatase |
RA | 3,961,966 | A→G | intergenic (‑122/+14) | gppA ← / ← rhlB | guanosine pentaphosphatase/putative ATP‑dependent RNA helicase |
RA | 3,962,662 | A→G | M195T (ATG→ACG) | rhlB ← | putative ATP‑dependent RNA helicase |
RA | 3,964,041 | A→G | T4A (ACC→GCC) | rho → | transcription termination factor Rho |
RA | 3,964,245 | T→C | Y72H (TAC→CAC) | rho → | transcription termination factor Rho |
RA | 3,965,229 | A→G | I400V (ATT→GTT) | rho → | transcription termination factor Rho |
RA | 3,966,992 | A→G | E117G (GAG→GGG) | wzzE → | putative transport protein |
RA | 3,967,307 | A→G | D222G (GAC→GGC) | wzzE → | putative transport protein |
JC | 3,968,317 | +CGT | coding (612/1170 nt) | wecB → | UDP‑N‑acetyl glucosamine ‑2‑epimerase |
RA | 3,968,566 | A→G | L287L (TTA→TTG) | wecB → | UDP‑N‑acetyl glucosamine ‑2‑epimerase |
RA | 3,969,103 | 2 bp→GC | coding (232‑233/1263 nt) | wecC → | UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase |
RA | 3,969,820 | C→T | R317C (CGC→TGC) | wecC → | UDP‑N‑acetyl‑D‑mannosaminuronic acid dehydrogenase |
RA | 3,971,075 | 2 bp→GC | coding (942‑943/1068 nt) | rffG → | dTDP‑glucose 4,6‑dehydratase |
RA | 3,972,637 | 2 bp→GC | coding (430‑431/546 nt) | wecD → | hypothetical protein |
RA | 3,972,641 | G→A | R145H (CGC→CAC) | wecD → | hypothetical protein |
RA | 3,973,216 | C→T | A153A (GCC→GCT) | wecE → | putative regulator |
RA | 3,974,008 | C→T | A40V (GCG→GTG) | wzxE → | putative cytochrome |
RA | 3,975,313 | Δ1 bp | intergenic (+173/‑901) | wzxE → / → wecF | putative cytochrome/TDP‑Fuc4NAc:lipidII transferase |
RA | 3,978,570 | (G)6→7 | coding (71/1386 nt) | yifK → | putative amino acid/amine transport protein |
RA | 3,978,702 | C→T | S68F (TCC→TTC) | yifK → | putative amino acid/amine transport protein |
RA | 3,979,535 | +G | coding (1036/1386 nt) | yifK → | putative amino acid/amine transport protein |
RA | 3,979,546 | Δ1 bp | coding (1047/1386 nt) | yifK → | putative amino acid/amine transport protein |
RA | 3,980,297 | (C)8→9 | noncoding (79/87 nt) | leuT → | tRNA‑Leu |
RA | 3,980,918 | 2 bp→CG | coding (348‑349/1236 nt) | aslB → | putative arylsulfatase regulator |
RA | 3,980,954 | A→G | L128L (TTA→TTG) | aslB → | putative arylsulfatase regulator |
RA | 3,985,741 | T→C | V313V (GTA→GTG) | hemX ← | uroporphyrinogen III methylase |
RA | 3,987,586 | 2 bp→GC | coding (814‑815/963 nt) | hemC ← | porphobilinogen deaminase |
RA | 3,987,807 | A→G | I198I (ATT→ATC) | hemC ← | porphobilinogen deaminase |
RA | 3,987,822 | 2 bp→CG | coding (578‑579/963 nt) | hemC ← | porphobilinogen deaminase |
RA | 3,989,898 | A→G | Q378R (CAG→CGG) | cyaA → | adenylate cyclase |
RA | 3,991,539 | T→C | N45S (AAT→AGT) I26T (ATT→ACT) |
cyaY ← b3808 → |
hypothetical protein hypothetical protein |
RA | 3,991,607 | G→A | D22D (GAC→GAT) V49I (GTC→ATC) |
cyaY ← b3808 → |
hypothetical protein hypothetical protein |
RA | 3,992,862 | A→G | Q164R (CAG→CGG) | dapF → | diaminopimelate epimerase |
RA | 3,992,894 | A→G | T175A (ACG→GCG) | dapF → | diaminopimelate epimerase |
RA | 3,998,290 | +G | coding (379/486 nt) | b4566 ← | hypothetical protein |
RA | 4,001,421 | 2 bp→GC | coding (381‑382/903 nt) | rarD ← | hypothetical protein |
RA | 4,001,486 | 2 bp→GC | coding (316‑317/903 nt) | rarD ← | hypothetical protein |
RA | 4,001,717 | +C | coding (86/903 nt) | rarD ← | hypothetical protein |
RA | 4,004,812 | T→C | R448R (CGT→CGC) | recQ → | ATP‑dependent DNA helicase |
RA | 4,004,979 | +G | coding (1511/1833 nt) | recQ → | ATP‑dependent DNA helicase |
RA | 4,004,984 | +CG | coding (1516/1833 nt) | recQ → | ATP‑dependent DNA helicase |
RA | 4,005,219 | T→C | V584A (GTT→GCT) | recQ → | ATP‑dependent DNA helicase |
RA | 4,005,601 | +C | coding (237/282 nt) | b4568 → | hypothetical protein |
RA | 4,006,407 | C→T | G19E (GGA→GAA) | yigK ← | hypothetical protein |
RA | 4,006,483 | +C | coding (183/207 nt) | b4554 ← | hypothetical protein |
RA | 4,007,718 | 2 bp→CG | coding (943‑944/1023 nt) | pldB → | lysophospholipase L(2) |
RA | 4,007,907 | +GG | intergenic (+109/‑11) | pldB → / → b4555 | lysophospholipase L(2)/hypothetical protein |
RA | 4,008,375 | +A | coding (458/516 nt) | b4555 → | hypothetical protein |
RA | 4,008,391 | +C | coding (474/516 nt) | b4555 → | hypothetical protein |
RA | 4,008,393 | C→G | A159G (GCT→GGT) | b4555 → | hypothetical protein |
RA | 4,008,400 | +GAAA | coding (483/516 nt) | b4555 → | hypothetical protein |
RA | 4,008,404 | +G | coding (487/516 nt) | b4555 → | hypothetical protein |
RA | 4,008,411 | +C | coding (494/516 nt) | b4555 → | hypothetical protein |
RA | 4,008,421 | +T | coding (504/516 nt) | b4555 → | hypothetical protein |
RA | 4,008,429 | +TG | coding (512/516 nt) | b4555 → | hypothetical protein |
RA | 4,008,469 | +G | intergenic (+36/‑197) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
RA | 4,008,473 | +G | intergenic (+40/‑193) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
RA | 4,008,491 | 2 bp→CG | intergenic (+58/‑174) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
RA | 4,008,525 | +G | intergenic (+92/‑141) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
RA | 4,008,990 | C→T | R109C (CGT→TGT) | yigM → | hypothetical protein |
RA | 4,011,430 | A→G | H263R (CAT→CGT) | metE → | tetrahydropteroyltriglutamate methyltransferase |
RA | 4,011,749 | A→G | A369A (GCA→GCG) | metE → | tetrahydropteroyltriglutamate methyltransferase |
RA | 4,013,176 | C→G | G182R (GGA→CGA) | ysgA ← | hypothetical protein |
RA | 4,013,177 | +C | coding (543/999 nt) | ysgA ← | hypothetical protein |
RA | 4,013,717 | +G | coding (3/999 nt) | ysgA ← | hypothetical protein |
RA | 4,013,772 | +C | intergenic (‑53/‑246) | ysgA ← / → udp | hypothetical protein/uridine phosphorylase |
RA | 4,014,125 | G→A | A36A (GCG→GCA) | udp → | uridine phosphorylase |
RA | 4,016,743 | C→T | P101L (CCC→CTC) | ubiE → | UbiE |
RA | 4,016,797 | A→G | Y119C (TAT→TGT) | ubiE → | UbiE |
RA | 4,016,822 | G→A | L127L (CTG→CTA) | ubiE → | UbiE |
RA | 4,017,557 | A→G | E116G (GAG→GGG) | yigP → | hypothetical protein |
RA | 4,019,057 | A→G | V415V (GTA→GTG) | yigR → | hypothetical protein |
RA | 4,019,857 | C→T | intergenic (+56/‑28) | b3836 → / → b3838 | hypothetical protein/hypothetical protein |
RA | 4,019,860 | Δ2 bp | intergenic (+59/‑24) | b3836 → / → b3838 | hypothetical protein/hypothetical protein |
RA | 4,021,684 | Δ1 bp | coding (542/609 nt)|coding (1/243 nt) | b4556 → tatD → |
hypothetical protein Mg‑dependent DNase |
RA | 4,023,531 | T→C | H318H (CAT→CAC) | yigC → | putative oxidoreductase |
RA | 4,026,252 | 2 bp→GC | coding (110‑111/1164 nt) | fadA ← | thiolase I |
RA | 4,031,772 | C→T | C346C (TGC→TGT) | trkH → | TrkH |
RA | 4,031,984 | +C | coding (1250/1299 nt) | trkH → | TrkH |
RA | 4,032,327 | A→G | Q44R (CAG→CGG) | hemG → | protoporphyrin oxidase |
RA | 4,032,390 | C→T | A65V (GCG→GTG) | hemG → | protoporphyrin oxidase |
RA | 4,035,428 | A→G | noncoding (330/2905 nt) | rrlA → | 23S ribosomal RNA |
RA | 4,039,960 | Δ1 bp | intergenic (+42/‑36) | yihD → / → yihE | hypothetical protein/hypothetical protein |
RA | 4,041,654 | G→A | intergenic (+29/‑125) | dsbA → / → b3861 | protein disulfide isomerase I/putative GTP‑binding protein |
RA | 4,041,671 | (T)6→7 | intergenic (+46/‑108) | dsbA → / → b3861 | protein disulfide isomerase I/putative GTP‑binding protein |
RA | 4,041,927 | A→G | Y50C (TAC→TGC) | b3861 → | putative GTP‑binding protein |
RA | 4,043,237 | A→G | intergenic (+28/+13) | b3861 → / ← yihG | putative GTP‑binding protein/putative endonuclease |
RA | 4,043,403 | A→G | H260H (CAT→CAC) | yihG ← | putative endonuclease |
RA | 4,043,629 | A→G | I185T (ATT→ACT) | yihG ← | putative endonuclease |
RA | 4,045,192 | C→T | A216V (GCC→GTC) | polA → | DNA polymerase I |
RA | 4,049,140 | A→G | I72V (ATT→GTT) | yihI → | hypothetical protein |
RA | 4,049,149 | G→A | G75S (GGC→AGC) | yihI → | hypothetical protein |
RA | 4,051,144 | Δ1 bp | intergenic (+146/+305) | hemN → / ← glnG | O2‑independent coproporphyrinogen III oxidase/GlnG |
RA | 4,051,170 | +C | intergenic (+172/+279) | hemN → / ← glnG | O2‑independent coproporphyrinogen III oxidase/GlnG |
RA | 4,052,844 | T→C | I5M (ATA→ATG) | glnG ← | GlnG |
RA | 4,056,373 | A→G | K129K (AAA→AAG) | yihK → | putative GTP‑binding factor |
RA | 4,057,759 | +C | coding (1773/1776 nt) | yihK → | putative GTP‑binding factor |
RA | 4,057,859 | (T)9→8 | intergenic (+97/‑167) | yihK → / → yihL | putative GTP‑binding factor/putative transcriptional regulator |
RA | 4,060,112 | A→G | Y96C (TAT→TGT) | yihN → | putative resistance protein |
RA | 4,060,598 | C→G | A258G (GCT→GGT) | yihN → | putative resistance protein |
RA | 4,061,961 | Δ1 bp | coding (1386/1458 nt) | b3876 ← | putative permease |
RA | 4,067,548 | T→C | H137R (CAC→CGC) | b3879 ← | putative aldose‑1‑epimerase |
RA | 4,071,901 | G→A | A197T (GCC→ACC) | yihV → | putative kinase |
RA | 4,074,827 | A→G | Q78R (CAG→CGG) | yihZ → | hypothetical protein |
RA | 4,076,069 | T→C | intergenic (+51/‑775) | yiiD → / → yiiE | putative acetyltransferase/hypothetical protein |
RA | 4,080,195 | A→G | C49R (TGT→CGT) | fdoH ← | formate dehydrogenase‑O, iron‑sulfur subunit |
RA | 4,080,532 | A→G | R957R (CGT→CGC) | fdoG ← | formate dehydrogenase‑O, major subunit |
RA | 4,081,716 | A→G | F563L (TTC→CTC) | fdoG ← | formate dehydrogenase‑O, major subunit |
RA | 4,083,471 | A→G | intergenic (‑69/‑125) | fdoG ← / → fdhD | formate dehydrogenase‑O, major subunit/affects formate dehydrogenase‑N |
RA | 4,083,858 | T→C | V88A (GTT→GCT) | fdhD → | affects formate dehydrogenase‑N |
RA | 4,084,090 | A→G | Q165Q (CAA→CAG) | fdhD → | affects formate dehydrogenase‑N |
RA | 4,085,675 | Δ1 bp | intergenic (+38/+13) | yiiG → / ← frvR | hypothetical protein/putative frv operon regulatory protein |
RA | 4,085,695 | T→C | K581R (AAG→AGG) | frvR ← | putative frv operon regulatory protein |
RA | 4,088,657 | T→C | I431V (ATC→GTC) | frvB ← | PTS system, fructose‑like enzyme IIBC component |
RA | 4,091,351 | C→T | G168D (GGC→GAC) | rhaD ← | rhamnulose‑phosphate aldolase |
MC JC | 4,091,572 | 3461 bp→29 bp | [rhaD]–rhaB | [rhaD], rhaA, rhaB | |
RA | 4,095,111 | G→A | intergenic (‑82/‑206) | rhaB ← / → rhaS | rhamnulokinase/RhaS |
RA | 4,097,623 | T→C | M162V (ATG→GTG) | rhaT ← | RhaT |
RA | 4,099,309 | (G)7→8 | coding (48/993 nt) | kdgT → | 2‑keto‑3‑deoxy‑D‑gluconate transport system |
RA | 4,103,519 | +T | intergenic (‑268/‑530) | cpxR ← / → yiiP | transcriptional regulator in 2‑component system/putative transport system permease protein |
RA | 4,103,641 | T→C | intergenic (‑390/‑408) | cpxR ← / → yiiP | transcriptional regulator in 2‑component system/putative transport system permease protein |
RA | 4,105,759 | A→G | I210V (ATC→GTC) | pfkA → | 6‑phosphofructokinase I |
RA | 4,106,773 | A→G | V120V (GTA→GTG) | sbp → | periplasmic sulfate‑binding protein |
RA | 4,108,133 | A→G | G208G (GGA→GGG) | cdh → | CDP‑diacylglycerol phosphotidylhydrolase |
RA | 4,112,113 | T→C | intergenic (‑61/+36) | fpr ← / ← glpX | ferredoxin‑NADP reductase/GlpX |
RA | 4,116,372 | T→C | intergenic (+32/+53) | yiiU → / ← menG | hypothetical protein/MenG |
RA | 4,120,133 | T→C | T263A (ACG→GCG) | ftsN ← | essential cell division protein |
RA | 4,120,575 | T→C | T115T (ACA→ACG) | ftsN ← | essential cell division protein |
RA | 4,121,069 | C→T | G323D (GGC→GAC) | cytR ← | CytR |
RA | 4,125,339 | C→T | D46N (GAT→AAT) | yiiX ← | hypothetical protein |
RA | 4,128,011 | C→T | A199A (GCC→GCT) | metL → | aspartokinase II |
RA | 4,128,355 | A→G | H314R (CAC→CGC) | metL → | aspartokinase II |
RA | 4,128,799 | T→C | V462A (GTA→GCA) | metL → | aspartokinase II |
RA | 4,130,739 | A→G | T182A (ACT→GCT) | metF → | 5,10‑methylenetetrahydrofolate reductase |
RA | 4,134,509 | A→G | E274E (GAA→GAG) | b3943 → | hypothetical protein |
RA | 4,137,208 | A→G | T27T (ACT→ACC) | talC ← | putative transaldolase |
RA | 4,137,219 | C→T | G24R (GGG→AGG) | talC ← | putative transaldolase |
RA | 4,138,157 | A→G | F427L (TTC→CTC) | ptsA ← | PEP‑protein phosphotransferase system enzyme I/IIA |
RA | 4,139,669 | +C | coding (233/330 nt) coding (132/159 nt) |
yijI → b4558 ← |
hypothetical protein hypothetical protein |
RA | 4,140,312 | G→A | M68I (ATG→ATA) | frwC → | PTS system fructose‑like enzyme IIC component |
RA | 4,149,200 | G→A | A493V (GCG→GTG) | ppc ← | phosphoenolpyruvate carboxylase |
RA | 4,149,444 | A→G | Y412H (TAC→CAC) | ppc ← | phosphoenolpyruvate carboxylase |
RA | 4,152,979 | G→A | G134S (GGT→AGT) | argC → | N‑acetyl‑gamma‑glutamylphosphate reductase |
RA | 4,158,827 | G→T | G61V (GGC→GTC) | yijC → | hypothetical protein |
RA | 4,158,977 | T→C | V111A (GTC→GCC) | yijC → | hypothetical protein |
RA | 4,161,702 | C→G | A162G (GCA→GGA) | btuB → | BtuB |
RA | 4,173,376 | A→G | noncoding (44/76 nt) | thrT → | tRNA‑Thr |
RA | 4,175,853 | G→A | V178I (GTT→ATT) | nusG → | NusG |
RA | 4,175,949 | +G | intergenic (+82/‑76) | nusG → / → rplK | NusG/50S ribosomal subunit protein L11 |
RA | 4,176,909 | A→G | E151E (GAA→GAG) | rplA → | 50S ribosomal subunit protein L1 |
RA | 4,178,668 | A→G | intergenic (+165/‑155) | rplL → / → rpoB | 50S ribosomal subunit protein L7/L12/RNA polymerase beta subunit |
RA | 4,185,057 | C→T | D710D (GAC→GAT) | rpoC → | RNA polymerase beta prime subunit |
RA | 4,185,074 | A→G | Q716R (CAG→CGG) | rpoC → | RNA polymerase beta prime subunit |
RA | 4,194,577 | 2 bp→GC | coding (97‑98/774 nt) | yjaD → | hypothetical protein |
RA | 4,198,118 | A→G | D87G (GAC→GGC) | hupA → | DNA‑binding protein HU‑alpha |
RA | 4,201,958 | G→A | W354* (TGG→TAG) | hydG → | HydG |
RA | 4,203,198 | Δ1 bp | coding (312/1290 nt) | purD ← | phosphoribosylglycinamide synthetase |
RA | 4,203,421 | A→G | V30A (GTT→GCT) | purD ← | phosphoribosylglycinamide synthetase |
RA | 4,205,033 | T→C | A26A (GCA→GCG) | purH ← | phosphoribosylaminoimidazolecarboxamideformyltra nsferase |
RA | 4,205,438 | T→C | intergenic (‑328/‑287) | purH ← / → rrsE | phosphoribosylaminoimidazolecarboxamideformyltra nsferase/16S ribosomal RNA |
RA | 4,211,571 | A→G | R44R (CGT→CGC) | yjaB ← | hypothetical protein |
RA | 4,213,360 | A→G | M102V (ATG→GTG) | aceB → | malate synthase A |
RA | 4,214,346 | A→G | E430E (GAA→GAG) | aceB → | malate synthase A |
RA | 4,215,052 | A→G | E122G (GAG→GGG) | aceA → | isocitrate lyase |
RA | 4,215,945 | T→C | S420P (TCT→CCT) | aceA → | isocitrate lyase |
RA | 4,216,494 | A→G | Y107C (TAC→TGC) | aceK → | isocitrate dehydrogenase kinase/phosphatase |
RA | 4,219,434 | A→G | A211A (GCT→GCC) | arp ← | Arp |
RA | 4,221,526 | A→G | E40E (GAA→GAG) | metH → | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
RA | 4,225,050 | A→G | E1215G (GAG→GGG) | metH → | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase |
RA | 4,225,139 | T→C | intergenic (+49/‑171) | metH → / → yjbB | B12‑dependent homocysteine‑N5‑methyltetrahydrofolate transmethylase/putative alpha helix protein |
RA | 4,227,795 | A→G | intergenic (‑74/‑138) | pepE ← / → yjbC | peptidase E/hypothetical protein |
RA | 4,236,786 | A→G | Y525C (TAC→TGC) | yjbH → | hypothetical protein |
RA | 4,239,076 | A→G | V253A (GTA→GCA) | xylE ← | xylose‑proton symport |
RA | 4,241,465 | T→C | D397G (GAC→GGC) | malF ← | MalF |
RA | 4,242,957 | C→T | E348K (GAA→AAA) | malE ← | periplasmic maltose‑binding protein |
RA | 4,243,337 | A→G | L221P (CTG→CCG) | malE ← | periplasmic maltose‑binding protein |
RA | 4,244,543 | T→C | F61L (TTC→CTC) | malK → | ATP‑binding component of transport system for maltose |
RA | 4,245,705 | T→C | G52G (GGT→GGC) | lamB → | phage lambda receptor protein |
RA | 4,246,188 | A→G | E213E (GAA→GAG) | lamB → | phage lambda receptor protein |
RA | 4,250,949 | A→G | I119V (ATT→GTT) | ubiA → | 4‑hydroxybenzoate‑octaprenyltransferase |
RA | 4,251,782 | A→G | V755A (GTG→GCG) | plsB ← | glycerol‑3‑phosphate acyltransferase |
RA | 4,259,162 | A→G | intergenic (+277/‑86) | yjbM → / → yjbN | hypothetical protein/hypothetical protein |
RA | 4,261,143 | T→C | E223G (GAA→GGA) | qor ← | quinone oxidoreductase |
RA | 4,261,198 | T→C | T205A (ACC→GCC) | qor ← | quinone oxidoreductase |
RA | 4,265,202 | A→G | L170L (TTA→TTG) | tyrB → | tyrosine aminotransferase |
RA | 4,270,212 | A→G | R413R (CGT→CGC) | uvrA ← | excision nuclease subunit A |
RA | 4,270,235 | A→G | C406R (TGC→CGC) | uvrA ← | excision nuclease subunit A |
RA | 4,275,617 | A→G | intergenic (+105/‑441) | soxR → / → yjcD | SoxR/hypothetical protein |
RA | 4,282,491 | A→G | V101A (GTA→GCA) | yjcH ← | hypothetical protein |
RA | 4,284,295 | A→G | V219A (GTA→GCA) | acs ← | acetyl‑CoA synthetase |
RA | 4,284,457 | C→T | G165D (GGC→GAC) | acs ← | acetyl‑CoA synthetase |
RA | 4,293,960 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate‑aspartate symport protein/hypothetical protein |
RA | 4,295,417 | G→A | P510L (CCG→CTG) | fdhF ← | selenopolypeptide subunit of formate dehydrogenase H |
RA | 4,297,280 | T→C | T444A (ACC→GCC) | yjcP ← | hypothetical protein |
RA | 4,298,670 | A→G | L616S (TTG→TCG) | yjcQ ← | hypothetical protein |
RA | 4,300,903 | A→G | G262G (GGT→GGC) | yjcR ← | putative membrane protein |
RA | 4,302,652 | A→G | Y513H (TAT→CAT) | yjcS ← | hypothetical protein |
RA | 4,307,603 | T→C | E319E (GAA→GAG) | yjcW ← | putative ATP‑binding component of a transport system |
RA | 4,311,496 | +C | coding (301/408 nt) | phnQ ← | hypothetical protein |
RA | 4,315,907 | +A | coding (436/759 nt) | phnK ← | ATP‑binding component of phosphonate transport |
RA | 4,316,203 | T→A | Q47L (CAG→CTG) | phnK ← | ATP‑binding component of phosphonate transport |
RA | 4,328,807 | A→G | Q243R (CAG→CGG) | proP → | proline permease II |
RA | 4,333,152 | A→G | L16P (CTA→CCA) | yjdB ← | hypothetical protein |
RA | 4,348,017 | C→T | A408A (GCG→GCA) | yjdH ← | putative 2‑component sensor protein |
RA | 4,356,775 | C→T | A279T (GCC→ACC) | cadB ← | transport of lysine/cadaverine |
RA | 4,356,994 | C→T | A206T (GCA→ACA) | cadB ← | transport of lysine/cadaverine |
RA | 4,363,427 | T→C | T309A (ACT→GCT) | dcuA ← | anaerobic dicarboxylate transport |
RA | 4,363,501 | A→G | I284T (ATC→ACC) | dcuA ← | anaerobic dicarboxylate transport |
RA | 4,366,832 | T→C | M387V (ATG→GTG) | yjeH ← | putative transport |
RA | 4,368,258 | A→G | intergenic (‑268/‑8) | yjeH ← / → mopB | putative transport/GroES |
RA | 4,369,183 | A→G | Q194R (CAG→CGG) | mopA → | GroEL |
RA | 4,369,637 | T→C | R345R (CGT→CGC) | mopA → | GroEL |
RA | 4,370,182 | A→G | N527S (AAC→AGC) | mopA → | GroEL |
RA | 4,372,457 | A→G | V260A (GTG→GCG) | yjeK ← | hypothetical protein |
RA | 4,378,338 | G→A | A520V (GCG→GTG) | frdA ← | FrdA |
RA | 4,381,510 | T→C | Y46H (TAC→CAC) | yjeM → | putative transport |
RA | 4,382,443 | A→G | T357A (ACG→GCG) | yjeM → | putative transport |
RA | 4,382,837 | T→C | V488A (GTC→GCC) | yjeM → | putative transport |
RA | 4,385,717 | T→C | N411S (AAC→AGC) | yjeP ← | putative periplasmic binding protein |
RA | 4,387,542 | A→G | F133L (TTT→CTT) | psd ← | phosphatidylserine decarboxylase |
RA | 4,388,343 | T→C | T249A (ACC→GCC) | b4161 ← | hypothetical protein |
RA | 4,388,932 | A→G | A52A (GCT→GCC) | b4161 ← | hypothetical protein |
RA | 4,390,710 | T→C | V312V (GTA→GTG) | yjeS ← | hypothetical protein |
RA | 4,392,958 | G→A | G439S (GGC→AGC) | yjeF → | hypothetical protein |
RA | 4,393,753 | G→A | A37A (GCG→GCA) | amiB → | N‑acetylmuramoyl‑l‑alanine amidase II |
RA | 4,395,292 | T→A | S101R (AGT→AGA) | mutL → | MutL |
RA | 4,406,298 | A→G | Q689Q (CAA→CAG) | b4179 → | hypothetical protein |
RA | 4,408,560 | G→A | A144T (GCC→ACC) | yjfJ → | hypothetical protein |
RA | 4,409,046 | C→T | A56V (GCC→GTC) | yjfK → | hypothetical protein |
RA | 4,414,467 | A→G | intergenic (‑119/‑63) | b4189 ← / → yjfP | hypothetical protein/hypothetical protein |
RA | 4,415,130 | C→T | P201S (CCT→TCT) | yjfP → | hypothetical protein |
RA | 4,422,211 | T→C | A53A (GCA→GCG) | yjfY ← | hypothetical protein |
RA | 4,423,015 | A→G | D107G (GAC→GGC) | rpsF → | 30S ribosomal subunit protein S6 |
RA | 4,427,095 | A→G | T195A (ACC→GCC) | b4207 → | FKBP‑type 22KD peptidyl‑prolyl cis‑trans isomerase (rotamase) |
RA | 4,428,092 | A→G | G217G (GGA→GGG) | cycA → | transport of D‑alanine, D‑serine, and glycine |
RA | 4,428,292 | T→C | V284A (GTT→GCT) | cycA → | transport of D‑alanine, D‑serine, and glycine |
RA | 4,431,142 | T→C | H154R (CAC→CGC) | ytfG ← | putative oxidoreductase |
RA | 4,431,925 | A→G | I79V (ATC→GTC) | b4212 → | hypothetical protein |
RA | 4,434,828 | T→C | Y166H (TAT→CAT) | cysQ → | CysQ |
RA | 4,435,684 | +A | coding (400/501 nt) | ytfI → | hypothetical protein |
RA | 4,435,689 | C→T | D135D (GAC→GAT) | ytfI → | hypothetical protein |
RA | 4,437,861 | A→G | V311A (GTG→GCG) | ytfL ← | putative transport protein |
RA | 4,438,341 | A→G | V151A (GTG→GCG) | ytfL ← | putative transport protein |
RA | 4,440,519 | A→G | E187E (GAA→GAG) | ytfM → | hypothetical protein |
RA | 4,441,383 | T→C | S475S (AGT→AGC) | ytfM → | hypothetical protein |
RA | 4,444,690 | T→C | V1001A (GTA→GCA) | ytfN → | hypothetical protein |
RA | 4,448,541 | +C | intergenic (+46/‑92) | ytfQ → / → ytfR | putative LACI‑type transcriptional regulator/YtfR |
RA | 4,448,543 | +C | intergenic (+48/‑90) | ytfQ → / → ytfR | putative LACI‑type transcriptional regulator/YtfR |
RA | 4,449,738 | +G | coding (1106/1254 nt) | ytfR → | YtfR |
RA | 4,450,334 | G→A | A64T (GCT→ACT) | ytfT → | putative transport system permease protein |
RA | 4,472,408 | A→G | intergenic (+117/‑28) | b4251 → / → b4252 | hypothetical protein/hypothetical protein |
RA | 4,473,339 | A→G | E122G (GAA→GGA) | yjgL → | hypothetical protein |
RA | 4,474,826 | +A | intergenic (+1/+44) | yjgL → / ← argI | hypothetical protein/ornithine carbamoyltransferase 1 |
MC JC | 4,474,849 | 20 bp→30 bp | intergenic (+24/+2) | yjgL → / ← argI | hypothetical protein/ornithine carbamoyltransferase 1 |
RA | 4,474,882 | C→T | T331T (ACG→ACA) | argI ← | ornithine carbamoyltransferase 1 |
RA | 4,475,662 | A→G | G71G (GGT→GGC) | argI ← | ornithine carbamoyltransferase 1 |
RA | 4,476,619 | A→G | V91A (GTG→GCG) | b4256 ← | hypothetical protein |
RA | 4,477,041 | Δ1 bp | intergenic (‑151/‑269) | b4256 ← / → yjgN | hypothetical protein/hypothetical protein |
RA | 4,477,068 | +C | intergenic (‑178/‑242) | b4256 ← / → yjgN | hypothetical protein/hypothetical protein |
RA | 4,477,281 | Δ1 bp | intergenic (‑391/‑29) | b4256 ← / → yjgN | hypothetical protein/hypothetical protein |
RA | 4,477,321 | Δ1 bp | coding (12/1182 nt) | yjgN → | hypothetical protein |
RA | 4,478,503 | (A)7→6 | intergenic (+12/+47) | yjgN → / ← valS | hypothetical protein/valine tRNA synthetase |
RA | 4,478,511 | Δ1 bp | intergenic (+20/+39) | yjgN → / ← valS | hypothetical protein/valine tRNA synthetase |
RA | 4,478,527 | Δ1 bp | intergenic (+36/+23) | yjgN → / ← valS | hypothetical protein/valine tRNA synthetase |
RA | 4,483,536 | T→C | intergenic (‑17/‑250) | pepA ← / → yjgP | aminopeptidase A/I/hypothetical protein |
RA | 4,484,261 | T→C | L159P (CTG→CCG) | yjgP → | hypothetical protein |
RA | 4,484,843 | T→C | V353A (GTC→GCC) | yjgP → | hypothetical protein |
RA | 4,484,849 | G→A | R355H (CGC→CAC) | yjgP → | hypothetical protein |
RA | 4,485,021 | A→G | S46G (AGT→GGT) | b4262 → | hypothetical protein |
RA | 4,502,304 | (T)5→6 | coding (679/1218 nt) | b4279 → | putative transport protein |
RA | 4,511,365 | A→G | L173P (CTT→CCT) | fecB ← | FecB |
RA | 4,511,632 | T→C | Q84R (CAG→CGG) | fecB ← | FecB |
RA | 4,513,662 | A→G | V195A (GTC→GCC) | fecA ← | FecA |
RA | 4,519,062 | A→G | I176T (ATA→ACA) | yjhF ← | putative transport system permease |
RA | 4,520,082 | A→G | H527H (CAT→CAC) | yjhG ← | putative dehydratase |
RA | 4,525,586 | A→G | intergenic (‑38/+93) | sgcA ← / ← sgcQ | putative PTS system enzyme IIA component/putative nucleoside triphosphatase |
RA | 4,531,428 | C→T | intergenic (‑76/‑1155) | yjhQ ← / → yjhR | hypothetical protein/putative frameshift suppressor |
RA | 4,542,643 | Δ1 bp | intergenic (+46/‑22) | b4316 → / → fimD | Pil/FimD |
RA | 4,544,170 | T→C | I502I (ATT→ATC) | fimD → | FimD |
RA | 4,544,274 | T→C | L537P (CTC→CCC) | fimD → | FimD |
RA | 4,549,566 | A→G | D121G (GAC→GGC) | uxuA → | mannonate hydrolase |
RA | 4,551,614 | T→C | L382P (CTG→CCG) | uxuB → | D‑mannonate oxidoreductase |
RA | 4,555,020 | A→G | M280T (ATG→ACG) | yjiE ← | putative transcriptional regulator LYSR‑type |
RA | 4,560,261 | C→T | intergenic (‑17/+51) | yjiJ ← / ← yjiK | putative transport protein/hypothetical protein |
RA | 4,562,600 | T→C | T274A (ACC→GCC) | yjiM ← | hypothetical protein |
RA | 4,563,909 | A→G | W303R (TGG→CGG) | yjiN ← | hypothetical protein |
RA | 4,572,726 | T→C | P341P (CCT→CCC) | yjiU → | hypothetical protein |
RA | 4,573,190 | Δ1 bp | coding (1487/1542 nt) | yjiU → | hypothetical protein |
RA | 4,575,878 | A→G | Y344H (TAT→CAT) | mcrB ← | McrB |
RA | 4,579,865 | T→C | S252G (AGC→GGC) | hsdM ← | DNA methylase M |
RA | 4,582,861 | A→G | S509P (TCC→CCC) | hsdR ← | endonuclease R |
RA | 4,583,050 | G→A | Q446* (CAA→TAA) | hsdR ← | endonuclease R |
RA | 4,593,254 | 2 bp→GC | coding (59‑60/807 nt) | yjjM ← | hypothetical protein |
RA | 4,593,336 | +G | intergenic (‑23/‑208) | yjjM ← / → yjjN | hypothetical protein/putative oxidoreductase |
RA | 4,600,078 | C→T | W135* (TGG→TAG) | yjjP ← | putative structural protein |
RA | 4,601,614 | (A)7→6 | coding (569/726 nt) | yjjQ → | putative regulator |
RA | 4,603,785 | A→G | noncoding (71/87 nt) | leuP ← | tRNA‑Leu |
RA | 4,604,832 | A→G | R146R (CGT→CGC) | yjjT ← | hypothetical protein |
RA | 4,606,400 | G→A | Q62Q (CAG→CAA) | yjjG → | putative phosphatase |
RA | 4,608,595 | 2 bp→GC | intergenic (+23/‑369) | prfC → / → osmY | peptide chain release factor RF‑3/OsmY |
RA | 4,614,238 | G→T | L133I (CTA→ATA) | yjjI ← | hypothetical protein |
RA | 4,619,453 | T→G | V39G (GTG→GGG) | yjjJ → | hypothetical protein |
RA | 4,621,644 | A→G | W15R (TGG→CGG) | lplA ← | lipoate‑protein ligase A |
RA | 4,622,791 | C→T | P110S (CCG→TCG) | serB → | 3‑phosphoserine phosphatase |
RA | 4,632,032 | A→G | L283P (CTG→CCG) | rob ← | right origin‑binding protein |
Unassigned missing coverage evidence | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NC_000913 | 223557–224771 | 225513–224855 | 85–1957 | 88 [84] | [83] 87 | rrsH–[alaV] | rrsH,ileV,[alaV] |
* | * | ÷ | NC_000913 | 363594 | 365526 | 1933 | 90 [84] | [0] 356 | lacZ | beta‑D‑galactosidase |
* | * | ÷ | NC_000913 | 2518999–2519016 | 2519098–2519072 | 57–100 | 90 [82] | [84] 86 | [valU]–[valX] | [valU],[valX] |
* | * | ÷ | NC_000913 | 2727656–2728586 | 2729335–2729100 | 515–1680 | 86 [84] | [85] 91 | [rrsG] | [rrsG] |
* | * | ÷ | NC_000913 | 3421355–3421870 | 3422219–3421880 | 11–865 | 87 [85] | [84] 91 | [rrfD]–[rrlD] | [rrfD],[rrlD] |
* | * | ÷ | NC_000913 | 3943615–3944234 | 3944234 | 1–620 | 90 [82] | [84] 89 | [rrlC] | [rrlC] |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 269765 = | NA (NA) | 346 (1.130) | 139/184 | 0.1 | 98.0% | coding (300/405 nt) | yi91a | hypothetical protein |
? | NC_000913 | = 370983 | 7 (0.020) | coding (536/882 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase | |||||
* | ? | NC_000913 | = 279335 | NA (NA) | 296 (0.960) | 130/184 | 0.3 | 97.4% | coding (252/339 nt) | b4505 | hypothetical protein |
? | NC_000913 | 370982 = | 8 (0.030) | coding (535/882 nt) | mhpC | 2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase | |||||
* | ? | NC_000913 | 365527 = | 0 (0.000) | 318 (1.070) | 134/178 | 0.1 | 69.6% | coding (3/3075 nt) | lacZ | beta‑D‑galactosidase |
? | NC_000913 | 4589230 = | 278 (0.930) | coding (4/1656 nt) | tsr | methyl‑accepting chemotaxis protein I | |||||
* | ? | NC_000913 | 1207013 = | 80 (0.260) | 115 (0.450) | 75/152 | 1.7 | 60.1% | coding (290/630 nt) | ycfK | hypothetical protein |
? | NC_000913 | 1208842 = | 87 (0.340) | coding (40/540 nt) | b1157 | putative tail fiber protein | |||||
* | ? | NC_000913 | = 1207028 | 80 (0.260) | 99 (0.390) | 72/152 | 1.9 | 56.4% | coding (305/630 nt) | ycfK | hypothetical protein |
? | NC_000913 | = 1208825 | 87 (0.340) | coding (57/540 nt) | b1157 | putative tail fiber protein | |||||
* | ? | NC_000913 | 3192559 = | 325 (1.060) | 244 (1.000) +ATGTGTTAATGAAACCTTC |
94/146 | 0.5 | 51.0% | intergenic (+18/+402) | b3051/b3052 | putative membrane protein/putative kinase |
? | NC_000913 | = 3192916 | 267 (0.870) | intergenic (+375/+45) | b3051/b3052 | putative membrane protein/putative kinase | |||||
* | ? | NC_000913 | 3349258 = | 24 (0.080) | 357 (1.160) | 138/184 | 0.1 | 93.7% | coding (1403/2331 nt) | arcB | aerobic respiration sensor‑response protein |
? | NC_000913 | = 3349263 | NA (NA) | coding (1398/2331 nt) | arcB | aerobic respiration sensor‑response protein | |||||
* | ? | NC_000913 | 3423228 = | NA (NA) | 318 (1.050) | 124/182 | 0.4 | NA | noncoding (1193/2904 nt) | rrlD | 23S ribosomal RNA |
? | NC_000913 | 3942517 = | NA (NA) | noncoding (1192/2906 nt) | rrlC | 23S ribosomal RNA |