Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,184,181 (T)5→6 intergenic (+200/‑22) ygiL → / → yi215 putative fimbrial‑like protein/IS2 hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,184,1761.T98.7% 232.3 / ‑3.2 78intergenic (+195/‑27)ygiL/yi215putative fimbrial‑like protein/IS2 hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base T (55/22);  total (56/22)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01

Only 100 of 128 total aligned reads displayed.

AAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACA  >  NC_000913/3184084‑3184201
                                                                                             |                         
aaaaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAg                            >  1:4435207/1‑93 (MQ=255)
 aaaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑t                          <  1:4242220/93‑1 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                         <  2:7661287/93‑1 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                         >  2:1663574/1‑93 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                         >  1:7383879/1‑93 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                         <  2:4131677/93‑1 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                         >  2:128917/1‑93 (MQ=255)
  aaTATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tt                         <  1:2701440/93‑1 (MQ=255)
   atatTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttt                        <  1:4748561/93‑1 (MQ=255)
   atatTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttt                        <  2:6104825/93‑1 (MQ=255)
   atatTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttt                        >  2:1209427/1‑93 (MQ=255)
   atatTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttt                        <  1:62850/93‑1 (MQ=255)
    tatttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttt                       <  1:6737534/93‑1 (MQ=255)
    tatttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttt                       >  2:6954096/1‑93 (MQ=255)
    tatttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttt                       >  2:2135710/1‑93 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttt                      <  2:5732520/93‑1 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttt                      >  2:3814411/1‑93 (MQ=255)
     atttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttt                      >  2:1823983/1‑93 (MQ=255)
      tttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttttt                     >  1:4039923/1‑92 (MQ=255)
      tttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttttt                     >  2:1522037/1‑92 (MQ=255)
      ttgattGTTCAGTATCCGGTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttttt                     <  1:7216032/90‑2 (MQ=14)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttttta                    <  2:4930777/93‑3 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttttta                    >  2:1355782/1‑91 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttttta                    <  2:2744712/93‑3 (MQ=255)
       ttattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑tttttta                    <  2:5391620/93‑3 (MQ=255)
        tattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttag                   <  2:311562/93‑4 (MQ=255)
        tattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttag                   >  1:1253766/1‑90 (MQ=255)
        tattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGCGATAGTCTTACTACTAG‑ttttttag                   >  1:2629100/1‑90 (MQ=255)
        tattGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGCGATAGTCTTAATACTAG‑ttttttag                   >  1:2629099/1‑90 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  >  1:4868630/1‑89 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  <  2:2912454/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  <  2:1712531/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  >  2:1139315/1‑89 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  >  2:6592033/1‑89 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  <  2:4347414/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  >  1:4386941/1‑89 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  >  1:4868631/1‑89 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  <  2:5131754/93‑5 (MQ=255)
         attGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  <  2:4976109/93‑5 (MQ=255)
         attGTTCATTATCCGTTAATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑ttttttaga                  <  1:3349395/93‑5 (MQ=255)
           tGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACt                 <  1:1089921/93‑1 (MQ=255)
           tGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACt                 >  2:1792874/1‑93 (MQ=255)
           tGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACt                 >  2:1727747/1‑93 (MQ=255)
            gTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTa                <  2:4591497/93‑1 (MQ=255)
            gTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTa                >  2:5267787/1‑93 (MQ=255)
            gTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTa                >  2:1863342/1‑93 (MQ=255)
            gTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTa                >  1:7574990/1‑93 (MQ=255)
            gTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTa                <  1:5396925/93‑1 (MQ=255)
             ttCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAg               >  2:363637/1‑93 (MQ=255)
             ttCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAg               >  1:2107486/1‑93 (MQ=255)
             ttCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAg               <  2:4168227/93‑1 (MQ=255)
             ttCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAg               >  1:405119/1‑93 (MQ=255)
             ttCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAg               >  2:6168780/1‑93 (MQ=255)
              tCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAGTAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGt              <  1:4289217/93‑1 (MQ=255)
              tCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGt              >  1:6057769/1‑93 (MQ=255)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCACTATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGta             >  1:1675067/1‑92 (MQ=14)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTc             >  2:3295277/1‑93 (MQ=255)
               cATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTc             >  1:1675068/1‑93 (MQ=255)
                aTTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCa            >  2:2263654/1‑93 (MQ=255)
                 ttATCCGTTATTAGACTGTCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCAt           <  2:2115783/93‑1 (MQ=255)
                 ttATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCAt           >  2:686442/1‑93 (MQ=255)
                 ttATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCAt           <  2:4947786/93‑1 (MQ=255)
                  tATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCAtt          <  2:3142884/93‑1 (MQ=255)
                  tATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCAtt          <  1:1156159/93‑1 (MQ=255)
                  tATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCAtt          >  2:1669602/1‑93 (MQ=255)
                  tATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCAtt          >  1:7908940/1‑93 (MQ=255)
                   aTCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTg         >  2:7504943/1‑93 (MQ=255)
                   aTCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTg         >  2:2170359/1‑93 (MQ=255)
                   aTCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTg         <  1:691596/93‑1 (MQ=255)
                   aTCCGTTATTAGACTGG‑CCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTgg        >  1:5001693/1‑93 (MQ=14)
                    tCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTgg        >  1:1263165/1‑93 (MQ=255)
                    tCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTgg        >  2:1485647/1‑93 (MQ=255)
                    tCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTgg        <  1:7189798/93‑1 (MQ=255)
                    tCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTgg        >  2:526120/1‑93 (MQ=255)
                    tCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTgg        >  2:4712308/1‑93 (MQ=255)
                     ccGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGga       <  2:3129364/93‑1 (MQ=255)
                     ccGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGga       <  2:480973/93‑1 (MQ=255)
                      cGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGgag      >  2:6378837/1‑93 (MQ=255)
                      cGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGgag      >  1:3908529/1‑93 (MQ=255)
                       gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGgaga     >  2:2616784/1‑93 (MQ=255)
                       gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGgaga     <  2:2270618/93‑1 (MQ=255)
                       gTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGgaga     >  1:7545049/1‑93 (MQ=255)
                        ttattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGaa    >  2:4733749/1‑93 (MQ=16)
                        ttattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGaa    <  2:807903/93‑1 (MQ=16)
                        ttattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGaa    >  2:2744614/1‑93 (MQ=16)
                        ttattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGaa    >  2:2054386/1‑93 (MQ=16)
                         tattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGaaa   >  2:4290486/1‑92 (MQ=12)
                         tattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAAc   >  2:4290485/1‑93 (MQ=12)
                         tattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAAc   <  1:4275589/93‑1 (MQ=12)
                         tattaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAAc   <  1:5164129/93‑1 (MQ=12)
                          attaGACTGGCCCCCTGAATCTCCGGACAACCAATATCACTTCAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  >  2:2929847/1‑93 (MQ=11)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  >  1:505673/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  >  1:5116463/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  <  1:4801033/93‑1 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  <  1:4329120/93‑1 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  >  1:3734696/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  >  1:3734695/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  >  1:1773506/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  >  1:5476441/1‑93 (MQ=9)
                          attaGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACa  >  1:6977534/1‑93 (MQ=9)
                                                                                             |                         
AAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACA  >  NC_000913/3184084‑3184201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAG  >  NC_000913/3184088‑3184274
                                                                                              |                                                                                             
TATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTT                                                                                               <  SRR4302543.6801169/94‑1 (MQ=60)
 ATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTT                                                                                              >  SRR4302543.4076080/1‑94 (MQ=57)
 ATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTT                                                                                              <  SRR4302543.1569536/94‑1 (MQ=57)
  TTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTta                                                                                             <  SRR4302543.7285977/94‑3 (MQ=56)
  TTGATTGTTCAGTATCCGGTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTta                                                                                             <  SRR4302543.7285976/94‑3 (MQ=19)
   TTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTtag                                                                                            >  SRR4302543.1265004/1‑91 (MQ=53)
   TTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGCGATAGTCTTACTACTAG‑TTTTTtag                                                                                            >  SRR4302543.2652893/1‑91 (MQ=49)
   TTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGCGATAGTCTTAATACTAG‑TTTTTtag                                                                                            >  SRR4302543.2652892/1‑91 (MQ=51)
    TATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTCATACTAGTTTTTTAGA                                                                                            >  SRR4302543.4426719/1‑94 (MQ=46)
    TATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGA                                                                                            >  SRR4302543.4426718/1‑94 (MQ=48)
    TATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGA                                                                                            >  SRR4302543.4913014/1‑94 (MQ=48)
    TATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGA                                                                                            >  SRR4302543.4913015/1‑94 (MQ=48)
    TATTGTTAATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGA                                                                                            >  SRR4302543.5912694/1‑94 (MQ=34)
     ATTGTTCATTATCCGTTAATAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGAC                                                                                           <  SRR4302543.3379554/94‑1 (MQ=34)
     AGTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGAC                                                                                           <  SRR4302543.6204433/94‑1 (MQ=40)
      TTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACT                                                                                          <  SRR4302543.896514/94‑1 (MQ=42)
       TGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTA                                                                                         >  SRR4302543.7647032/1‑94 (MQ=40)
       TGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTA                                                                                         >  SRR4302543.4855085/1‑94 (MQ=40)
       TGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTA                                                                                         <  SRR4302543.1099718/94‑1 (MQ=40)
        GTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAG                                                                                        >  SRR4302543.408857/1‑94 (MQ=37)
        GTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAG                                                                                        <  SRR4302543.5446003/94‑1 (MQ=37)
        GTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAG                                                                                        <  SRR4302543.6844075/94‑1 (MQ=37)
        GTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAG                                                                                        >  SRR4302543.2126348/1‑94 (MQ=37)
         TTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGT                                                                                       >  SRR4302543.6115115/1‑94 (MQ=34)
          TCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCACTATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTA                                                                                      >  SRR4302543.1690080/1‑94 (MQ=30)
          TCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAGTAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTC                                                                                      <  SRR4302543.4328208/94‑1 (MQ=30)
          TCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTC                                                                                      >  SRR4302543.1690081/1‑94 (MQ=32)
             TTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATT                                                                                   >  SRR4302543.7983251/1‑94 (MQ=25)
              TATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTG                                                                                  <  SRR4302543.1166684/94‑1 (MQ=22)
              TATCCGTTATTAGACTGG‑CCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGG                                                                                 >  SRR4302543.5047222/1‑94 (MQ=21)
               ATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGG                                                                                 <  SRR4302543.697938/94‑1 (MQ=20)
               ATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGG                                                                                 >  SRR4302543.4311060/1‑94 (MQ=20)
               ATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGG                                                                                 >  SRR4302543.1274473/1‑94 (MQ=20)
                TCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGA                                                                                <  SRR4302543.7259536/94‑1 (MQ=12)
                 CCGTTATTAGACTGGCGCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAG                                                                               <  SRR4302543.5149222/94‑1 (MQ=6)
                 CCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAG                                                                               >  SRR4302543.3943032/1‑94 (MQ=7)
                 CCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAG                                                                               >  SRR4302543.7910267/1‑94 (MQ=7)
                  CGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGA                                                                              >  SRR4302543.7616935/1‑94 (MQ=4)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           <  SRR4302543.4072859/94‑1 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           <  SRR4302543.4314451/94‑1 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           >  SRR4302543.3767547/1‑94 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           >  SRR4302543.3767546/1‑94 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           >  SRR4302543.510370/1‑94 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           >  SRR4302543.5162747/1‑94 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           <  SRR4302543.5210790/94‑1 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           >  SRR4302543.5526067/1‑94 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           >  SRR4302543.1789356/1‑94 (MQ=0)
                     TATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACA                                                                           >  SRR4302543.7043198/1‑94 (MQ=0)
                      ATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAG                                                                          <  SRR4302543.4368405/94‑1 (MQ=0)
                      ATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAG                                                                          >  SRR4302543.7631436/1‑94 (MQ=0)
                      ATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAG                                                                          >  SRR4302543.7631437/1‑94 (MQ=0)
                      ATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAG                                                                          <  SRR4302543.4844911/94‑1 (MQ=0)
                      ATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAG                                                                          >  SRR4302543.1577911/1‑94 (MQ=0)
                       TTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGA                                                                         >  SRR4302543.1684693/1‑94 (MQ=0)
                       TTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGA                                                                         >  SRR4302543.3040000/1‑94 (MQ=0)
                       TTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGAT                                                                        >  SRR4302543.1993602/1‑94 (MQ=0)
                       TTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGAT                                                                        <  SRR4302543.6414029/94‑1 (MQ=0)
                       TTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGAT                                                                        <  SRR4302543.7862327/94‑1 (MQ=0)
                       TTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGAT                                                                        >  SRR4302543.4516108/1‑94 (MQ=0)
                        TAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATG                                                                       <  SRR4302543.7738813/94‑1 (MQ=0)
                         AGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATG                                                                       >  SRR4302543.1221668/1‑94 (MQ=0)
                         AGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGA                                                                      <  SRR4302543.5845395/94‑1 (MQ=0)
                          GACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGAT                                                                     <  SRR4302543.1294779/94‑1 (MQ=0)
                            CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTG                                                                   >  SRR4302543.5737295/1‑94 (MQ=0)
                            CTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTG                                                                   >  SRR4302543.5065766/1‑94 (MQ=0)
                              GGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGAT                                                                 <  SRR4302543.6615971/94‑1 (MQ=0)
                               GCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATG                                                                >  SRR4302543.3904264/1‑94 (MQ=0)
                               GCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATG                                                                >  SRR4302543.900823/1‑94 (MQ=0)
                                 CCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGT                                                               >  SRR4302543.1614515/1‑94 (MQ=0)
                                 CCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTC                                                              >  SRR4302543.3998877/1‑94 (MQ=0)
                                  CCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGATTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTC                                                              >  SRR4302543.4106826/1‑94 (MQ=0)
                                  CCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCT                                                             <  SRR4302543.4031733/94‑1 (MQ=0)
                                  CCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCT                                                             >  SRR4302543.2291467/1‑94 (MQ=0)
                                   CCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTT                                                            >  SRR4302543.3598375/1‑94 (MQ=0)
                                   CCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTT                                                            >  SRR4302543.2157498/1‑94 (MQ=0)
                                   CCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTT                                                            >  SRR4302543.855843/1‑94 (MQ=0)
                                    CTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTA                                                           >  SRR4302543.4477299/1‑94 (MQ=0)
                                    CTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTA                                                           >  SRR4302543.3488942/1‑94 (MQ=0)
                                     TGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAG                                                          <  SRR4302543.1418880/94‑1 (MQ=0)
                                     TGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAG                                                          <  SRR4302543.5228306/94‑1 (MQ=0)
                                     TGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAG                                                          <  SRR4302543.863772/94‑1 (MQ=0)
                                      GAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGG                                                         <  SRR4302543.3236156/94‑1 (MQ=0)
                                      GAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGG                                                         >  SRR4302543.5368140/1‑94 (MQ=0)
                                       AATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGG                                                        <  SRR4302543.3709289/94‑1 (MQ=0)
                                        ATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGG                                                        <  SRR4302543.5454868/94‑1 (MQ=0)
                                         TCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCC                                                      <  SRR4302543.6531272/94‑1 (MQ=0)
                                          CTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCG                                                     >  SRR4302543.5473606/1‑94 (MQ=0)
                                           TCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGG                                                    <  SRR4302543.5383504/94‑1 (MQ=0)
                                            CTAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGG                                                    <  SRR4302543.4052909/94‑1 (MQ=0)
                                            CCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGA                                                   <  SRR4302543.4749559/94‑1 (MQ=0)
                                             CAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAG                                                  <  SRR4302543.6510510/94‑1 (MQ=0)
                                              AGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGA                                                 >  SRR4302543.7268761/1‑94 (MQ=0)
                                              AGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGA                                                 <  SRR4302543.6858938/94‑1 (MQ=0)
                                                 CAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAA                                               >  SRR4302543.1683189/1‑94 (MQ=0)
                                                 CAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGTGCTGGAGAAAC                                              >  SRR4302543.5381969/1‑94 (MQ=0)
                                                 CAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAAC                                              >  SRR4302543.547245/1‑94 (MQ=0)
                                                 CAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAAC                                              >  SRR4302543.2886730/1‑94 (MQ=0)
                                                  AACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACG                                             <  SRR4302543.5983201/94‑1 (MQ=0)
                                                    CCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCA                                           >  SRR4302543.1074138/1‑94 (MQ=0)
                                                    CCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCA                                           >  SRR4302543.827012/1‑94 (MQ=0)
                                                     CAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAG                                          >  SRR4302543.4562219/1‑94 (MQ=0)
                                                     CAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAG                                          <  SRR4302543.3162612/94‑1 (MQ=0)
                                                     CAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAG                                          >  SRR4302543.4293409/1‑94 (MQ=0)
                                                     CAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAG                                          <  SRR4302543.5213626/94‑1 (MQ=0)
                                                      AATATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAG                                          >  SRR4302543.1602839/1‑94 (MQ=0)
                                                      AATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGA                                         <  SRR4302543.6611682/94‑1 (MQ=0)
                                                       ATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGAC                                        <  SRR4302543.523130/94‑1 (MQ=0)
                                                       ATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGAC                                        <  SRR4302543.7309472/94‑1 (MQ=0)
                                                       ATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGAC                                        >  SRR4302543.6228427/1‑94 (MQ=0)
                                                        TATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACG                                       <  SRR4302543.4992585/94‑1 (MQ=0)
                                                        TATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACG                                       <  SRR4302543.598739/94‑1 (MQ=0)
                                                         ATCACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACG                                       <  SRR4302543.2020274/94‑1 (MQ=0)
                                                         ATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGG                                      <  SRR4302543.3992898/94‑1 (MQ=0)
                                                         ATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGG                                      <  SRR4302543.1132443/94‑1 (MQ=0)
                                                         ATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGG                                      >  SRR4302543.3580866/1‑94 (MQ=0)
                                                          TCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGC                                     <  SRR4302543.3498040/94‑1 (MQ=0)
                                                          TCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGC                                     >  SRR4302543.5061120/1‑94 (MQ=0)
                                                           CACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCG                                    >  SRR4302543.5525314/1‑94 (MQ=0)
                                                           CACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCG                                    >  SRR4302543.3138306/1‑94 (MQ=0)
                                                            ACTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCG                                    >  SRR4302543.7431472/1‑94 (MQ=0)
                                                            ACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGT                                   >  SRR4302543.6894995/1‑94 (MQ=0)
                                                             CTTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGT                                   >  SRR4302543.219402/1‑94 (MQ=0)
                                                             CTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTA                                  >  SRR4302543.7720644/1‑94 (MQ=0)
                                                             CTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTA                                  >  SRR4302543.795394/1‑94 (MQ=0)
                                                             CTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTC                                  >  SRR4302543.6007515/1‑94 (MQ=0)
                                                              TTAAATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTA                                  >  SRR4302543.3945826/1‑94 (MQ=0)
                                                              TTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTAC                                 <  SRR4302543.5347275/94‑1 (MQ=0)
                                                                AAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCA                               >  SRR4302543.7715328/1‑94 (MQ=0)
                                                                  ATAAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCAC                              >  SRR4302543.6979938/1‑94 (MQ=0)
                                                                  ATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACA                             >  SRR4302543.7752891/1‑94 (MQ=0)
                                                                  ATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACA                             >  SRR4302543.4870012/1‑94 (MQ=0)
                                                                  ATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACA                             >  SRR4302543.7230883/1‑94 (MQ=0)
                                                                  ATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACA                             >  SRR4302543.5001244/1‑94 (MQ=0)
                                                                  ATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACA                             >  SRR4302543.5597128/1‑94 (MQ=0)
                                                                    AAGTGATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACAC                            >  SRR4302543.3348021/1‑94 (MQ=0)
                                                                    AAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACA                           >  SRR4302543.6414102/1‑94 (MQ=0)
                                                                    AAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACA                           >  SRR4302543.6675293/1‑94 (MQ=0)
                                                                      GTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTACCACACAGG                         >  SRR4302543.2354025/1‑94 (MQ=0)
                                                                      GTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGG                         >  SRR4302543.2224147/1‑94 (MQ=0)
                                                                       TGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGA                        >  SRR4302543.298801/1‑94 (MQ=0)
                                                                        GATAGTCTCAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAA                       <  SRR4302543.1939132/94‑1 (MQ=0)
                                                                         ATAGTCTTAATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAA                       >  SRR4302543.2470013/1‑94 (MQ=0)
                                                                         ATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTACCACACAGGAAA                      >  SRR4302543.394528/1‑94 (MQ=0)
                                                                            GTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTACCACACAGGAAAAGA                   >  SRR4302543.6835932/1‑94 (MQ=0)
                                                                            GTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGA                   <  SRR4302543.6348814/94‑1 (MQ=0)
                                                                              CTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATC                 >  SRR4302543.2500997/1‑94 (MQ=0)
                                                                               TTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCG                >  SRR4302543.5190597/1‑94 (MQ=0)
                                                                               TTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCG                <  SRR4302543.2000918/94‑1 (MQ=0)
                                                                                 AATACTGG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCA              >  SRR4302543.3728652/1‑94 (MQ=0)
                                                                                 AATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGC               >  SRR4302543.4086808/1‑94 (MQ=0)
                                                                                 AATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCA              >  SRR4302543.4443233/1‑94 (MQ=0)
                                                                                  ATACTAGTTTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCA              >  SRR4302543.7491827/1‑94 (MQ=0)
                                                                                  ATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAA             >  SRR4302543.1652107/1‑94 (MQ=0)
                                                                                   TACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAAT            <  SRR4302543.2146401/94‑1 (MQ=0)
                                                                                    ACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATT           >  SRR4302543.5316043/1‑94 (MQ=0)
                                                                                    ACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATT           >  SRR4302543.112910/1‑94 (MQ=0)
                                                                                    ACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATT           >  SRR4302543.4718744/1‑94 (MQ=0)
                                                                                    ACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATT           >  SRR4302543.4850648/1‑94 (MQ=0)
                                                                                     CTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTG          >  SRR4302543.1960063/1‑94 (MQ=0)
                                                                                     CTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTG          >  SRR4302543.3472429/1‑94 (MQ=0)
                                                                                      TAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGT         >  SRR4302543.6693914/1‑94 (MQ=0)
                                                                                      TAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGT         >  SRR4302543.3273053/1‑94 (MQ=0)
                                                                                       AG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCTGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTT        >  SRR4302543.4576642/1‑94 (MQ=0)
                                                                                       AG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTT        <  SRR4302543.4639305/94‑1 (MQ=0)
                                                                                        G‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTC       <  SRR4302543.5619932/94‑1 (MQ=0)
                                                                                          TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCA      <  SRR4302543.3080143/94‑1 (MQ=0)
                                                                                          TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCA      <  SRR4302543.6089151/94‑1 (MQ=0)
                                                                                           TTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAG     <  SRR4302543.537435/94‑1 (MQ=0)
                                                                                            TTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGC    >  SRR4302543.2973600/1‑94 (MQ=0)
                                                                                             TTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCA   <  SRR4302543.1363268/94‑1 (MQ=0)
                                                                                             TTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCA   <  SRR4302543.4891305/94‑1 (MQ=0)
                                                                                              TAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAG  <  SRR4302543.1533480/94‑1 (MQ=0)
                                                                                              TAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAG  <  SRR4302543.6538468/94‑1 (MQ=0)
                                                                                              TAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAG  >  SRR4302543.350288/1‑94 (MQ=0)
                                                                                              |                                                                                             
TATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATCACTTAAATAAGTGATAGTCTTAATACTAG‑TTTTTAGACTAGTCATTGGAGAACAGATGATTGATGTCTTAGGGCCGGAGAAACGCAGACGGCGTACCACACAGGAAAAGATCGCAATTGTTCAGCAG  >  NC_000913/3184088‑3184274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑