Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,509,958 Δ1 bp intergenic (‑195/+314) yhfZ ← / ← trpS hypothetical protein/tryptophan tRNA synthetase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,509,9560T.99.7% 1457.2 / ‑3.4 320intergenic (‑193/+316)yhfZ/trpShypothetical protein/tryptophan tRNA synthetase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base . (111/208);  minor base A (0/1);  total (111/209)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 362 total aligned reads displayed.

CGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG  >  NC_000913/3509864‑3510044
                                                                                            |                                                                                        
cGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCct                                                                                          <  1:5146536/93‑1 (MQ=255)
  gCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttc                                                                                        <  2:2169966/93‑2 (MQ=255)
   cattcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttct                                                                                       <  1:104416/93‑3 (MQ=255)
   cattcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttct                                                                                       <  1:4189718/93‑3 (MQ=255)
    attcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttctt                                                                                      <  2:1621201/93‑4 (MQ=255)
     ttcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttcttt                                                                                     >  1:5087922/1‑89 (MQ=255)
     ttcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCcttcttt                                                                                     <  1:3467990/93‑5 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   >  2:4397634/1‑93 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   <  2:6070072/93‑1 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   <  2:7345800/93‑1 (MQ=255)
      tcattTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttt                                                                                   <  2:7690248/93‑1 (MQ=255)
        attTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCtttttt                                                                                 <  1:5572636/93‑1 (MQ=255)
         tttGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTCTtttttt                                                                                 >  2:4266487/1‑93 (MQ=255)
           tGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGAt                                                                              <  1:7242220/93‑1 (MQ=255)
           tGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGAt                                                                              <  2:6232359/93‑1 (MQ=255)
           tGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGAt                                                                              <  2:7192967/93‑1 (MQ=255)
           tGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGAt                                                                              <  2:3307168/93‑1 (MQ=255)
            tccAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATa                                                                             <  1:469704/92‑1 (MQ=255)
            gCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATa                                                                             >  2:5624557/1‑93 (MQ=255)
            gCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATa                                                                             <  1:5170625/93‑1 (MQ=255)
              cAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGATGACGCC‑TTCTTTTTTGATaaa                                                                           <  2:5772695/93‑1 (MQ=255)
               aGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAc                                                                          <  1:6921326/93‑1 (MQ=255)
                gCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACg                                                                         <  1:7925136/93‑1 (MQ=255)
                 cTCATCTATGGGTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGt                                                                        >  2:4566721/1‑93 (MQ=255)
                   cATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTc                                                                      <  2:2358669/93‑1 (MQ=255)
                   cATCTAGGGTTTTCAAGCGATTACCGCACATTTCACCCAACAAATAACGGGCCAGCGTTGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTc                                                                      <  1:2853869/93‑1 (MQ=255)
                     tCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGa                                                                    >  2:5308340/1‑93 (MQ=255)
                      cTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGCTGACGACGCC‑TTCTTTTTTGATAAACGTTCGAc                                                                   >  1:7624029/1‑93 (MQ=255)
                      cTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGAc                                                                   <  2:7413329/93‑1 (MQ=255)
                        aTGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGc                                                                 >  2:6406538/1‑93 (MQ=255)
                         tGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCa                                                                <  1:5003689/93‑1 (MQ=255)
                         tGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCa                                                                >  2:2610487/1‑93 (MQ=255)
                            ttttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataa                                                             <  2:6992974/93‑1 (MQ=255)
                            ttttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataa                                                             >  2:6476162/1‑93 (MQ=255)
                             tttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataat                                                            <  1:4584746/93‑1 (MQ=255)
                              ttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataata                                                           <  2:4879084/93‑1 (MQ=255)
                              ttCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCataata                                                           <  1:4292454/93‑1 (MQ=255)
                               tCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACTCAtaataa                                                          >  1:6499745/1‑93 (MQ=255)
                                 aaTCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAt                                                        >  2:1185947/1‑93 (MQ=255)
                                 aaTCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAt                                                        <  1:4839823/93‑1 (MQ=255)
                                  aTCGATTACCCCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAtt                                                       <  1:6672317/93‑1 (MQ=255)
                                    cGATTAGCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TGCTTTTTTGATAAACGTTCGACGCATAATAAAtttt                                                     <  2:5152714/93‑1 (MQ=255)
                                     gATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTc                                                    <  1:6247958/93‑1 (MQ=255)
                                     gATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTc                                                    <  2:3574052/93‑1 (MQ=255)
                                        tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGt                                                 >  2:3669657/1‑93 (MQ=255)
                                        tACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGt                                                 <  2:466496/93‑1 (MQ=255)
                                         aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                <  2:7873055/93‑1 (MQ=255)
                                         aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                >  2:4778884/1‑93 (MQ=255)
                                         aCCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTa                                                >  1:3788731/1‑93 (MQ=255)
                                          ccGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTaa                                               <  1:3154059/93‑1 (MQ=255)
                                            gCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt                                             <  2:2759247/93‑1 (MQ=255)
                                            gCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt                                             <  1:2025312/93‑1 (MQ=255)
                                            gCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt                                             >  1:2702017/1‑93 (MQ=255)
                                            gCACTTTTCACCCAACAAATAACGGGCAAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAt                                             <  1:610877/93‑1 (MQ=255)
                                             cACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAtt                                            <  1:6379874/93‑1 (MQ=255)
                                              aCTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTg                                           <  1:2449259/93‑1 (MQ=255)
                                                ttttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGaa                                         <  2:5032803/93‑1 (MQ=255)
                                                ttttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGaa                                         >  1:6770910/1‑93 (MQ=255)
                                                  ttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGGC‑TTCTTTTTTGATAAACGTTCGGCGCATAATAAATTTTCAGTAAATTGAata                                       <  1:2341153/93‑1 (MQ=255)
                                                  ttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAata                                       <  1:1898087/93‑1 (MQ=255)
                                                  ttCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAata                                       <  2:3841346/93‑1 (MQ=255)
                                                   tCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAatat                                      <  1:6048426/93‑1 (MQ=255)
                                                      cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                   >  2:5447989/1‑93 (MQ=255)
                                                      cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                   <  1:6124535/93‑1 (MQ=255)
                                                      cccAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTta                                   <  2:3978875/93‑1 (MQ=255)
                                                        caacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTtata                                 <  2:3122971/93‑1 (MQ=255)
                                                         aacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatat                                <  2:1976585/93‑1 (MQ=255)
                                                         aacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatat                                >  2:1312231/1‑93 (MQ=255)
                                                         aacaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatat                                <  2:7080047/93‑1 (MQ=255)
                                                          acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTatatt                               >  1:6414183/1‑92 (MQ=255)
                                                          acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATc                               <  2:1526696/93‑1 (MQ=255)
                                                          acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATc                               <  1:5793425/93‑1 (MQ=255)
                                                          acaaATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATc                               >  1:1719621/1‑93 (MQ=255)
                                                            aaaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCtt                             <  2:6556426/93‑1 (MQ=255)
                                                            aaaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCtt                             <  1:3644822/93‑1 (MQ=255)
                                                            aaaTAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCtt                             <  1:5389106/93‑1 (MQ=255)
                                                              aTAACGGGCCAGCGGCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCa                           <  2:2142727/93‑1 (MQ=255)
                                                               tAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAg                          <  1:1414255/93‑1 (MQ=255)
                                                                aaCGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAgg                         <  1:2901007/93‑1 (MQ=255)
                                                                  cGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGaa                       <  1:7049450/93‑1 (MQ=255)
                                                                   gggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAt                      <  1:2258702/93‑1 (MQ=255)
                                                                    ggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAtt                     >  1:1829414/1‑93 (MQ=255)
                                                                    ggCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAtt                     <  1:975716/93‑1 (MQ=255)
                                                                        aGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGaa                 <  1:2119734/93‑1 (MQ=255)
                                                                         gCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAg                <  2:3565333/93‑1 (MQ=255)
                                                                          cgtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGa               >  1:3336848/1‑93 (MQ=255)
                                                                          cgtcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGa               <  1:1427993/93‑1 (MQ=255)
                                                                            tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATa             <  2:860194/93‑1 (MQ=255)
                                                                            tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATa             <  2:7748701/93‑1 (MQ=255)
                                                                            tcgtGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATa             <  1:1336776/93‑1 (MQ=255)
                                                                               tgatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAgg          <  1:455137/93‑1 (MQ=255)
                                                                                gatgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgc         >  1:7387836/1‑93 (MQ=255)
                                                                                  tgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgcgc       >  2:2270797/1‑93 (MQ=255)
                                                                                  tgaCGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGgcgc       >  1:6012857/1‑93 (MQ=255)
                                                                                    gcgacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCaa     <  2:1861204/92‑1 (MQ=255)
                                                                                    acgacgCC‑TTCTTTTTTGATGAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCaa     >  2:1121901/1‑93 (MQ=255)
                                                                                    acgacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCaa     <  2:2460389/93‑1 (MQ=255)
                                                                                    acgacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCaa     >  1:4379823/1‑93 (MQ=255)
                                                                                      gacgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACa   <  2:3103501/93‑1 (MQ=255)
                                                                                       acgCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGTAATTTGAAGATAAGGCGCAACAg  >  2:4309120/1‑93 (MQ=255)
                                                                                            |                                                                                        
CGGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG  >  NC_000913/3509864‑3510044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  >  NC_000913/3509865‑3510051
                                                                                             |                                                                                             
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTC                                                                                               >  SRR4302543.907305/1‑94 (MQ=60)
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTC                                                                                               <  SRR4302543.4616896/94‑1 (MQ=60)
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTC                                                                                               >  SRR4302543.4054814/1‑94 (MQ=60)
  CATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTT                                                                                            <  SRR4302543.105379/94‑1 (MQ=60)
  CATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTT                                                                                            <  SRR4302543.4227704/94‑1 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCCCTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           <  SRR4302543.3535339/94‑1 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTTATGACGACGCC‑TTCTTT                                                                                           >  SRR4302543.5892689/1‑94 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           >  SRR4302543.2341360/1‑94 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           <  SRR4302543.2080692/94‑1 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           <  SRR4302543.704226/94‑1 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           >  SRR4302543.5134039/1‑94 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           <  SRR4302543.1830345/94‑1 (MQ=60)
   ATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTT                                                                                           <  SRR4302543.4659650/94‑1 (MQ=60)
    TTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTT                                                                                          <  SRR4302543.3499051/94‑1 (MQ=60)
    TTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTT                                                                                          <  SRR4302543.1424346/94‑1 (MQ=60)
    TTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGGGATGACGACGCC‑TTCTTTT                                                                                          >  SRR4302543.7419772/1‑94 (MQ=60)
    TTAATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTT                                                                                          <  SRR4302543.6439921/94‑1 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                        <  SRR4302543.5858451/94‑1 (MQ=60)
      CATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTT                                                                                        >  SRR4302543.5198784/1‑94 (MQ=60)
       CTTTGGCAGCTCATCTATGGTTTTCAGTCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                       <  SRR4302543.7059900/94‑1 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                       <  SRR4302543.5623351/94‑1 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                       <  SRR4302543.6208703/94‑1 (MQ=60)
       ATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTG                                                                                       <  SRR4302543.5623352/94‑1 (MQ=60)
          TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATA                                                                                    <  SRR4302543.767022/94‑1 (MQ=60)
          TGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATA                                                                                    <  SRR4302543.7312308/94‑1 (MQ=60)
           TCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAA                                                                                   <  SRR4302543.474065/94‑1 (MQ=60)
           GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAA                                                                                   <  SRR4302543.1960577/94‑1 (MQ=60)
           GCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAA                                                                                   <  SRR4302543.5217330/94‑1 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                 >  SRR4302543.5159028/1‑94 (MQ=60)
             CAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAAC                                                                                 <  SRR4302543.1210804/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                                <  SRR4302543.6930448/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                                <  SRR4302543.2590258/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                                <  SRR4302543.6986401/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                                <  SRR4302543.5092659/94‑1 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                                >  SRR4302543.1195021/1‑94 (MQ=60)
              AGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACG                                                                                <  SRR4302543.340969/94‑1 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGT                                                                               >  SRR4302543.2400390/1‑94 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGT                                                                               <  SRR4302543.7999563/94‑1 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGT                                                                               >  SRR4302543.6908203/1‑94 (MQ=60)
               GCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGT                                                                               <  SRR4302543.7999562/94‑1 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                              <  SRR4302543.2220533/94‑1 (MQ=60)
                CTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTT                                                                              <  SRR4302543.5825242/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTC                                                                             <  SRR4302543.3304668/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTC                                                                             <  SRR4302543.3183923/94‑1 (MQ=60)
                 TCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTC                                                                             <  SRR4302543.2320019/94‑1 (MQ=60)
                  CATCTAGGGTTTTCAAGCGATTACCGCACATTTCACCCAACAAATAACGGGCCAGCGTTGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCG                                                                            <  SRR4302543.2879908/94‑1 (MQ=60)
                    TCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGCTGACGACGCC‑TTCTTTTTTGATAAACGTTCGAC                                                                          >  SRR4302543.7696381/1‑94 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                         <  SRR4302543.3664752/94‑1 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                         >  SRR4302543.3547159/1‑94 (MQ=60)
                     CTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACG                                                                         <  SRR4302543.4065189/94‑1 (MQ=60)
                       ATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCA                                                                       <  SRR4302543.4312125/94‑1 (MQ=60)
                       ATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCA                                                                       >  SRR4302543.2018077/1‑94 (MQ=60)
                        TGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCAT                                                                      <  SRR4302543.5049232/94‑1 (MQ=60)
                          GTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAA                                                                    >  SRR4302543.5577379/1‑94 (MQ=60)
                           TTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAAT                                                                   <  SRR4302543.5222378/94‑1 (MQ=60)
                           TTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAAT                                                                   <  SRR4302543.2719244/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA                                                                  <  SRR4302543.4626399/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATA                                                                  <  SRR4302543.2831745/94‑1 (MQ=60)
                            TTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAACGGCGTGGTGACGACGCC‑TTATTTTTTTCTAAACAATCGACGCATAATA                                                                  >  SRR4302543.2881984/1‑94 (MQ=54)
                             TTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACTCATAATAA                                                                 >  SRR4302543.6560980/1‑94 (MQ=60)
                             TTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAA                                                                 <  SRR4302543.6285261/94‑1 (MQ=60)
                             TTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAA                                                                 <  SRR4302543.4331481/94‑1 (MQ=60)
                              TCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAA                                                                <  SRR4302543.2935025/94‑1 (MQ=60)
                              TCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAA                                                                <  SRR4302543.6170181/94‑1 (MQ=60)
                               CAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAAT                                                               <  SRR4302543.4931017/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                              <  SRR4302543.4883957/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                              <  SRR4302543.2786356/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                              <  SRR4302543.6291038/94‑1 (MQ=60)
                                AATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACG‑CATTCTTTTTTGATAAACGTTCGACGCATAATAAATT                                                              <  SRR4302543.2743613/94‑1 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302543.6710400/94‑1 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302543.4480405/94‑1 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302543.7202349/94‑1 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302543.6075820/94‑1 (MQ=60)
                                 ATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302543.6735315/94‑1 (MQ=60)
                                 ATCGATTACCCCCCTGTTCACCCAACAAATAACGGGGCCGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302543.6735312/94‑1 (MQ=60)
                                 ATCGATTACCCCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTT                                                             <  SRR4302543.6735314/94‑1 (MQ=60)
                                   CGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTC                                                           >  SRR4302543.5054598/1‑94 (MQ=60)
                                   CGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTC                                                           >  SRR4302543.1892083/1‑94 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCA                                                          <  SRR4302543.6306897/94‑1 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302543.4403299/1‑94 (MQ=60)
                                    GATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCA                                                          >  SRR4302543.3495118/1‑94 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       >  SRR4302543.3822113/1‑94 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       <  SRR4302543.1443681/94‑1 (MQ=60)
                                       TACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTA                                                       <  SRR4302543.5638994/94‑1 (MQ=60)
                                         CCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAA                                                     <  SRR4302543.3182439/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    <  SRR4302543.7892746/94‑1 (MQ=60)
                                          CGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAAT                                                    >  SRR4302543.2726525/1‑94 (MQ=60)
                                           GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT                                                   <  SRR4302543.6372097/94‑1 (MQ=60)
                                           GCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT                                                   <  SRR4302543.2043513/94‑1 (MQ=60)
                                           GCACTTTTCACCCAACAAATAACGGGCAAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT                                                   <  SRR4302543.616456/94‑1 (MQ=60)
                                           CCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATT                                                   <  SRR4302543.6077173/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                  <  SRR4302543.4522968/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                  <  SRR4302543.6439901/94‑1 (MQ=60)
                                            CACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTG                                                  >  SRR4302543.3941288/1‑94 (MQ=60)
                                             ACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGA                                                 <  SRR4302543.2471346/94‑1 (MQ=60)
                                              CTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAA                                                >  SRR4302543.4320044/1‑94 (MQ=60)
                                              CTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAA                                                >  SRR4302543.6834867/1‑94 (MQ=60)
                                              CTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAA                                                >  SRR4302543.6835107/1‑94 (MQ=60)
                                                TTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCGTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATA                                              <  SRR4302543.5738350/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGGC‑TTCTTTTTTGATAAACGTTCGGCGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302543.2362392/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302543.1915164/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302543.6114126/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302543.2362622/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302543.2611248/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302543.1918717/94‑1 (MQ=60)
                                                 TTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATAT                                             <  SRR4302543.5070170/94‑1 (MQ=60)
                                                  TCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATT                                            <  SRR4302543.6105678/94‑1 (MQ=60)
                                                   CACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTT                                           <  SRR4302543.6445646/94‑1 (MQ=60)
                                                    ACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTA                                          <  SRR4302543.7303901/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCTGTAAATTGAATATTTAT                                         <  SRR4302543.4620948/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         >  SRR4302543.6813373/1‑94 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302543.6182538/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302543.4817671/94‑1 (MQ=60)
                                                     CCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTAT                                         <  SRR4302543.6182539/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        >  SRR4302543.7699321/1‑94 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        >  SRR4302543.6048542/1‑94 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        <  SRR4302543.4423893/94‑1 (MQ=60)
                                                      CCAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATA                                        <  SRR4302543.85165/94‑1 (MQ=60)
                                                       CAACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATAT                                       <  SRR4302543.1437966/94‑1 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGCTAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC                                      >  SRR4302543.6553467/1‑94 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATT                                      >  SRR4302543.6474599/1‑94 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC                                      >  SRR4302543.3576612/1‑94 (MQ=60)
                                                        AACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATC                                      >  SRR4302543.1734971/1‑94 (MQ=60)
                                                         ACAAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCT                                     <  SRR4302543.5846129/94‑1 (MQ=60)
                                                           AAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTC                                   <  SRR4302543.5438081/94‑1 (MQ=60)
                                                           AAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTC                                   <  SRR4302543.7257856/94‑1 (MQ=60)
                                                           AAATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTC                                   <  SRR4302543.3676873/94‑1 (MQ=60)
                                                             ATAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAG                                 <  SRR4302543.2908106/94‑1 (MQ=60)
                                                              TAACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGG                                <  SRR4302543.1427056/94‑1 (MQ=60)
                                                               AACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGA                               >  SRR4302543.1127896/1‑94 (MQ=60)
                                                               AACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGA                               <  SRR4302543.2927384/94‑1 (MQ=60)
                                                                ACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAA                              <  SRR4302543.5364074/94‑1 (MQ=60)
                                                                ACGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAA                              <  SRR4302543.3706622/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             <  SRR4302543.7117848/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             <  SRR4302543.1895122/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             <  SRR4302543.7562783/94‑1 (MQ=60)
                                                                 CGGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAAT                             <  SRR4302543.3481916/94‑1 (MQ=60)
                                                                  GGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT                            >  SRR4302543.1594232/1‑94 (MQ=60)
                                                                  GGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT                            >  SRR4302543.1845845/1‑94 (MQ=60)
                                                                  GGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT                            <  SRR4302543.5198206/94‑1 (MQ=60)
                                                                  GGGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATT                            <  SRR4302543.2279278/94‑1 (MQ=60)
                                                                   GGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTT                           <  SRR4302543.984314/94‑1 (MQ=60)
                                                                   GGCCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTT                           <  SRR4302543.4403843/94‑1 (MQ=60)
                                                                    GCCAGCGTCGTGATGACGACGCC‑TTCTTTTTAGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTG                          <  SRR4302543.474257/94‑1 (MQ=60)
                                                                     CCAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGA                         >  SRR4302543.6694725/1‑94 (MQ=60)
                                                                      CAGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAA                        <  SRR4302543.633257/94‑1 (MQ=60)
                                                                       AGCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAG                       <  SRR4302543.2138709/94‑1 (MQ=60)
                                                                        GCGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGA                      >  SRR4302543.3366912/1‑94 (MQ=60)
                                                                         CGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGAT                     <  SRR4302543.1440909/94‑1 (MQ=60)
                                                                         CGTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAATAAATTGAATATTTATATCTTCAGGAATTTGAAGAT                     <  SRR4302543.4824752/94‑1 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302543.1445923/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302543.7369693/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302543.6472643/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302543.3718358/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302543.4325216/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302543.5202741/1‑94 (MQ=60)
                                                                          GTCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATA                    >  SRR4302543.1804491/1‑94 (MQ=60)
                                                                           TCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAG                   <  SRR4302543.4720345/94‑1 (MQ=60)
                                                                           TCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA                   <  SRR4302543.2065166/94‑1 (MQ=60)
                                                                           TCGTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAA                   <  SRR4302543.1348697/94‑1 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 >  SRR4302543.6120100/1‑94 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 >  SRR4302543.473352/1‑94 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 >  SRR4302543.1362942/1‑94 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 >  SRR4302543.1362943/1‑94 (MQ=60)
                                                                             GTGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGG                 <  SRR4302543.639792/94‑1 (MQ=60)
                                                                              TGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGC                >  SRR4302543.7458818/1‑94 (MQ=60)
                                                                              TGATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGC                <  SRR4302543.459375/94‑1 (MQ=60)
                                                                               GATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCG               <  SRR4302543.1427945/94‑1 (MQ=60)
                                                                                ATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGC              >  SRR4302543.2294127/1‑94 (MQ=60)
                                                                                ATGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGC              >  SRR4302543.6068383/1‑94 (MQ=60)
                                                                                 TGACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCA             >  SRR4302543.6131139/1‑94 (MQ=60)
                                                                                  GACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAA            >  SRR4302543.4419526/1‑94 (MQ=60)
                                                                                   ACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAAC           >  SRR4302543.3152542/1‑94 (MQ=60)
                                                                                   ACGACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAAC           >  SRR4302543.850766/1‑94 (MQ=60)
                                                                                     GACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAG         >  SRR4302543.3059370/1‑94 (MQ=60)
                                                                                      ACGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGC        <  SRR4302543.5394443/94‑1 (MQ=60)
                                                                                       CGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG       >  SRR4302543.3113955/1‑94 (MQ=60)
                                                                                       CGCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCG       >  SRR4302543.3227166/1‑94 (MQ=60)
                                                                                        GCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGA      >  SRR4302543.6825172/1‑94 (MQ=60)
                                                                                        GCC‑TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGA      >  SRR4302543.5186112/1‑94 (MQ=60)
                                                                                          CCTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     >  SRR4302543.1238932/1‑94 (MQ=60)
                                                                                          CCTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAG     >  SRR4302543.1238931/1‑94 (MQ=60)
                                                                                           CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA    >  SRR4302543.1597720/1‑94 (MQ=60)
                                                                                           CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA    >  SRR4302543.3068576/1‑94 (MQ=60)
                                                                                           CTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGA    >  SRR4302543.3216339/1‑94 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302543.4857327/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302543.6146344/94‑1 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   >  SRR4302543.5979816/1‑94 (MQ=60)
                                                                                            TTCTTTTTTGATAAACGTTCGACGCATAATAAATGTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGAT   <  SRR4302543.4857325/94‑1 (MQ=60)
                                                                                             TCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  <  SRR4302543.4502820/94‑1 (MQ=60)
                                                                                             TCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  <  SRR4302543.1142293/94‑1 (MQ=60)
                                                                                             |                                                                                             
GGCATTCATTTGCCAGCTCATCTATGGTTTTCAATCGATTACCGCACTTTTCACCCAACAAATAACGGGCCAGCGTCGTGATGACGACGCCTTTCTTTTTTGATAAACGTTCGACGCATAATAAATTTTCAGTAAATTGAATATTTATATCTTCAGGAATTTGAAGATAAGGCGCAACAGCGAGATG  >  NC_000913/3509865‑3510051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑