Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,548,005 C→T G701D (GGT→GAT)  malP ← maltodextrin phosphorylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,548,0050CT99.7% 1169.5 / ‑5.5 323G701D (GGT→GAT) malPmaltodextrin phosphorylase
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base T (156/165);  total (157/166)
Fisher's exact test for biased strand distribution p-value = 4.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.90e-01

Only 100 of 371 total aligned reads displayed.

ATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTACCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCT  >  NC_000913/3547915‑3548094
                                                                                          |                                                                                         
 tACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCaccttatctt                                                                                        >  1:7926322/1‑93 (MQ=255)
 tACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCaccttatctt                                                                                        <  2:5141144/93‑1 (MQ=255)
  aCTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCttt                                                                                       >  1:3108482/1‑93 (MQ=255)
   cTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTttc                                                                                      >  2:4752858/1‑93 (MQ=255)
   cTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTttc                                                                                      <  2:4855905/93‑1 (MQ=255)
    tgtgCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTttct                                                                                     <  1:7256388/93‑1 (MQ=255)
     gtgCAGCATCTGGTCGAGGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTAtctttctt                                                                                    >  1:7809148/1‑93 (MQ=255)
     gtgCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTAtctttctt                                                                                    >  1:5785507/1‑93 (MQ=255)
       gcagcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTcc                                                                                  >  1:1007494/1‑93 (MQ=255)
         agcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGc                                                                                >  2:278201/1‑93 (MQ=255)
         agcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGc                                                                                >  1:5150947/1‑93 (MQ=255)
          gcaTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGCATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGcc                                                                               >  2:4070842/1‑93 (MQ=255)
           caTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCa                                                                              <  2:3750390/93‑1 (MQ=255)
            aTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCAt                                                                             >  2:4983914/1‑93 (MQ=255)
            aTCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCAt                                                                             <  2:7263300/93‑1 (MQ=255)
             tCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCAtt                                                                            <  2:4209257/93‑1 (MQ=255)
              cTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCAttt                                                                           >  1:5055557/1‑93 (MQ=255)
                 gTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCAc                                                                        >  2:2644624/1‑93 (MQ=255)
                 gTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCAc                                                                        <  2:6216541/93‑1 (MQ=255)
                  tCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCAcc                                                                       <  1:1530444/93‑1 (MQ=255)
                   cGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCg                                                                      <  1:7406033/93‑1 (MQ=255)
                   cGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCg                                                                      <  1:1571140/93‑1 (MQ=255)
                    gAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCgg                                                                     >  1:4978965/1‑93 (MQ=255)
                     aaGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCggg                                                                    >  2:794601/1‑93 (MQ=255)
                       ggCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTc                                                                  >  1:3324705/1‑93 (MQ=255)
                          aTGCTTATCGCGGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTa                                                               <  2:4152605/93‑1 (MQ=255)
                          aTGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTa                                                               >  2:2567879/1‑93 (MQ=255)
                          aTGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTa                                                               >  1:2541007/1‑93 (MQ=255)
                          aTGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTa                                                               >  1:3898399/1‑93 (MQ=255)
                          aTGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTa                                                               <  1:7552018/93‑1 (MQ=255)
                          aTGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTa                                                               >  2:5962501/1‑93 (MQ=255)
                           tGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAg                                                              >  1:7010327/1‑93 (MQ=255)
                           tGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAg                                                              >  1:418957/1‑93 (MQ=255)
                           tGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAg                                                              >  1:370306/1‑93 (MQ=255)
                           tGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAg                                                              >  2:5756150/1‑93 (MQ=255)
                            gCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGc                                                             >  2:2359799/1‑93 (MQ=255)
                            gCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGc                                                             <  1:359434/93‑1 (MQ=255)
                              ttATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCt                                                           >  2:6569801/1‑93 (MQ=255)
                              tcaTCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCt                                                           >  1:7513055/3‑93 (MQ=255)
                               tATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCtt                                                          <  1:686180/93‑1 (MQ=255)
                                aTCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCttt                                                         <  1:1113714/93‑1 (MQ=255)
                                 tCGCCGTCACTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTg                                                        <  1:2229344/93‑1 (MQ=255)
                                     cGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCTGCCATTTCACCGGGTCGTAGCCTGTGGCCa                                                    >  1:4376012/1‑93 (MQ=255)
                                       tCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGa                                                  >  2:880757/1‑93 (MQ=255)
                                       tCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGa                                                  >  2:5575897/1‑93 (MQ=255)
                                        cGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGaa                                                 <  1:6705381/93‑1 (MQ=255)
                                          cTGCATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAtt                                               <  1:7148278/93‑1 (MQ=255)
                                           tGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTg                                              >  1:6753243/1‑93 (MQ=255)
                                           tGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTg                                              >  1:3286241/1‑93 (MQ=255)
                                             tATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGcc                                            >  2:7732161/1‑93 (MQ=255)
                                               tttACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCtt                                          >  1:6171580/1‑93 (MQ=255)
                                                ttACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTc                                         <  1:1836171/93‑1 (MQ=255)
                                                 tatcGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCa                                        <  2:1657939/90‑1 (MQ=255)
                                                 tACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCa                                        <  1:1927213/93‑1 (MQ=255)
                                                  aCCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCAc                                       <  2:7860710/93‑1 (MQ=255)
                                                  aCCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCAc                                       <  2:3905863/93‑1 (MQ=255)
                                                    cGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACtt                                     <  2:3780774/93‑1 (MQ=255)
                                                      cTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGt                                   >  2:4650491/1‑93 (MQ=255)
                                                       tttCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGtt                                  >  1:435098/1‑93 (MQ=255)
                                                       tttCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGtt                                  <  2:5339896/93‑1 (MQ=255)
                                                       tttCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGtt                                  >  1:4676353/1‑93 (MQ=255)
                                                         tCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTcc                                <  2:6352204/93‑1 (MQ=255)
                                                         tCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTcc                                >  2:3179985/1‑93 (MQ=255)
                                                           cAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCAc                              >  2:3003619/1‑93 (MQ=255)
                                                           cAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCAc                              >  1:4075677/1‑93 (MQ=255)
                                                            aGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACg                             >  1:5834307/1‑93 (MQ=255)
                                                             gCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACgg                            <  2:3694707/93‑1 (MQ=255)
                                                             gCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACgg                            >  1:2361395/1‑93 (MQ=255)
                                                               tctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTa                          >  1:2868002/1‑93 (MQ=255)
                                                                ctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAt                         <  1:464437/93‑1 (MQ=255)
                                                                ctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAt                         <  1:7680584/93‑1 (MQ=255)
                                                                ctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAt                         <  1:4460218/93‑1 (MQ=255)
                                                                ctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAt                         >  2:1742998/1‑93 (MQ=255)
                                                                ctTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAt                         >  2:3272880/1‑93 (MQ=255)
                                                                 tttCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATg                        <  2:6767188/93‑1 (MQ=255)
                                                                   tCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGAc                      <  2:3084814/93‑1 (MQ=255)
                                                                    cAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGAcc                     >  1:5673368/1‑93 (MQ=255)
                                                                        aCTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCaaaa                 <  1:894910/93‑1 (MQ=255)
                                                                         cTGCGTCCAGCACCTTATCTTTCATCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCaaaaa                <  2:5658785/93‑1 (MQ=255)
                                                                          tGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAt               >  1:5542444/1‑93 (MQ=255)
                                                                             gTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATaaa            >  2:1997029/1‑93 (MQ=255)
                                                                             gTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATaaa            <  1:4907534/93‑1 (MQ=255)
                                                                             gTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATaaa            <  2:7607896/93‑1 (MQ=255)
                                                                             gTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATaaa            <  2:1277248/93‑1 (MQ=255)
                                                                              tCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAACATaaaa           >  2:1464610/1‑92 (MQ=255)
                                                                               ccAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGa          <  1:5435778/93‑1 (MQ=255)
                                                                               ccAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGa          <  2:5043090/93‑1 (MQ=255)
                                                                                 aGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGata        >  2:1115844/1‑93 (MQ=255)
                                                                                  gCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGatat       <  1:347546/93‑1 (MQ=255)
                                                                                  gCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGatat       <  1:1472162/93‑1 (MQ=255)
                                                                                   cACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAtt      <  2:7125862/93‑1 (MQ=255)
                                                                                    cccttaacttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAttt     <  1:5971248/92‑1 (MQ=255)
                                                                                    accttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAttt     <  1:6447799/93‑1 (MQ=255)
                                                                                     ccttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAtttt    <  2:7448867/93‑1 (MQ=255)
                                                                                     ccttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAtttt    >  1:2065138/1‑93 (MQ=255)
                                                                                     ccttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAtttt    >  2:349909/1‑93 (MQ=255)
                                                                                      cttatcttTCTTCCGCCATTTCATCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttc   <  2:4303050/93‑1 (MQ=255)
                                                                                      cttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttc   <  2:7799498/93‑1 (MQ=255)
                                                                                       ttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttct  <  2:698224/93‑1 (MQ=255)
                                                                                       ttatcttTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTttct  >  1:5230688/1‑93 (MQ=255)
                                                                                          |                                                                                         
ATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTACCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCT  >  NC_000913/3547915‑3548094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 207 total aligned reads displayed.
CCGATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTACCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCAC  >  NC_000913/3547912‑3548098
                                                                                             |                                                                                             
CCGATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTAT                                                                                               <  SRR4302543.3541073/94‑1 (MQ=60)
CCGATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTAT                                                                                               <  SRR4302543.7973821/94‑1 (MQ=60)
 CGATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATC                                                                                              <  SRR4302543.835785/94‑1 (MQ=60)
 CGATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATC                                                                                              <  SRR4302543.477271/94‑1 (MQ=60)
 CGATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATC                                                                                              >  SRR4302543.593508/1‑94 (MQ=60)
 CGATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATC                                                                                              >  SRR4302543.593507/1‑94 (MQ=60)
   ATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTT                                                                                            >  SRR4302543.8000754/1‑94 (MQ=60)
    TACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTT                                                                                           <  SRR4302543.3724689/94‑1 (MQ=60)
    TACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTT                                                                                           >  SRR4302543.3136446/1‑94 (MQ=60)
      CTGTGCAGCATGTGGTGGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTTTTTCAATACTGCGTCCAGCACCTTATCTTTCT                                                                                         <  SRR4302543.126890/94‑1 (MQ=60)
      CTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCT                                                                                         <  SRR4302543.3206153/94‑1 (MQ=60)
      CTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCT                                                                                         <  SRR4302543.1941354/94‑1 (MQ=60)
       TGTGCAGCATCTGGTCGAGGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTT                                                                                        >  SRR4302543.7882758/1‑94 (MQ=60)
       TGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTT                                                                                        >  SRR4302543.5838146/1‑94 (MQ=60)
         TGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCC                                                                                      >  SRR4302543.1016406/1‑94 (MQ=60)
         TGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGCATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCC                                                                                      <  SRR4302543.1543496/94‑1 (MQ=60)
          GCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCG                                                                                     <  SRR4302543.3530951/94‑1 (MQ=60)
           CAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGC                                                                                    >  SRR4302543.5197503/1‑94 (MQ=60)
           CAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGC                                                                                    >  SRR4302543.4414840/1‑94 (MQ=60)
              CATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCAT                                                                                 >  SRR4302543.5486593/1‑94 (MQ=60)
              CATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCAT                                                                                 >  SRR4302543.4038007/1‑94 (MQ=60)
               ATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATT                                                                                >  SRR4302543.6840235/1‑94 (MQ=60)
               ATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATT                                                                                >  SRR4302543.3601473/1‑94 (MQ=60)
               ATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATT                                                                                <  SRR4302543.7680866/94‑1 (MQ=60)
                TCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTT                                                                               >  SRR4302543.5101518/1‑94 (MQ=60)
                  TGGTCGAAGGCATGCTTATCGCCGTCGCTGCATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCA                                                                             <  SRR4302543.6884235/94‑1 (MQ=60)
                    GTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACC                                                                           <  SRR4302543.1886035/94‑1 (MQ=60)
                     TCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCG                                                                          <  SRR4302543.1544165/94‑1 (MQ=60)
                     TCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCG                                                                          >  SRR4302543.2504427/1‑94 (MQ=60)
                      CGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGG                                                                         <  SRR4302543.41849/94‑1 (MQ=60)
                      CGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGG                                                                         <  SRR4302543.7477109/94‑1 (MQ=60)
                      CGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGG                                                                         <  SRR4302543.1585164/94‑1 (MQ=60)
                      CGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGG                                                                         >  SRR4302543.5024289/1‑94 (MQ=60)
                      CGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGG                                                                         <  SRR4302543.7189599/94‑1 (MQ=60)
                      CGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGG                                                                         >  SRR4302543.6786101/1‑94 (MQ=60)
                      CGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGG                                                                         >  SRR4302543.6790510/1‑94 (MQ=60)
                      CGAAGGCATGCTTATAGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGG                                                                         >  SRR4302543.6790774/1‑94 (MQ=60)
                        AAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGT                                                                       >  SRR4302543.3893144/1‑94 (MQ=60)
                         AGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTC                                                                      >  SRR4302543.3354695/1‑94 (MQ=60)
                          GGCATGCTTATCGCCGTCGCTGCATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCG                                                                     >  SRR4302543.601403/1‑94 (MQ=60)
                            CATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCCTTTCACCGGGTCGTA                                                                   >  SRR4302543.332463/1‑94 (MQ=60)
                            CATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTA                                                                   >  SRR4302543.2357762/1‑94 (MQ=60)
                            CATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTA                                                                   >  SRR4302543.2564174/1‑94 (MQ=60)
                            CATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTA                                                                   <  SRR4302543.2955164/94‑1 (MQ=60)
                            CATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTA                                                                   >  SRR4302543.3932825/1‑94 (MQ=60)
                            CATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCAACGTGTCGTA                                                                   >  SRR4302543.5078665/1‑94 (MQ=60)
                             ATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAG                                                                  >  SRR4302543.373713/1‑94 (MQ=60)
                             ATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAG                                                                  >  SRR4302543.422867/1‑94 (MQ=60)
                             ATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAG                                                                  >  SRR4302543.3174121/1‑94 (MQ=60)
                             ATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAG                                                                  <  SRR4302543.7623945/94‑1 (MQ=60)
                             ATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAG                                                                  >  SRR4302543.7314362/1‑94 (MQ=60)
                             ATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAG                                                                  >  SRR4302543.7077140/1‑94 (MQ=60)
                             ATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAG                                                                  <  SRR4302543.2005759/94‑1 (MQ=60)
                               GCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCC                                                                <  SRR4302543.362759/94‑1 (MQ=60)
                                CTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCT                                                               >  SRR4302543.2662107/1‑94 (MQ=60)
                                CTCATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCT                                                               >  SRR4302543.7584815/1‑94 (MQ=60)
                                 TTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTT                                                              >  SRR4302543.1174254/1‑94 (MQ=60)
                                  TATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTT                                                             <  SRR4302543.692498/94‑1 (MQ=60)
                                   ATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTG                                                            <  SRR4302543.1123787/94‑1 (MQ=60)
                                   ATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTG                                                            <  SRR4302543.3740279/94‑1 (MQ=60)
                                   ATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTG                                                            <  SRR4302543.5443678/94‑1 (MQ=60)
                                   ATCGCCGTCGCTGCATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTG                                                            >  SRR4302543.6747479/1‑94 (MQ=60)
                                    TCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACAGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGG                                                           <  SRR4302543.3038719/94‑1 (MQ=60)
                                    TCGCCGTCACTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGG                                                           <  SRR4302543.2249477/94‑1 (MQ=60)
                                      GCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCC                                                         <  SRR4302543.7246562/94‑1 (MQ=60)
                                       CCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATAGTGGGGCCAGCACCTTATCTTTCTTagggcatttgaccgggcagtaggctttggccg                                                        >  SRR4302543.4415660/1‑62 (MQ=56)
                                       CCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCTGCCATTTCACCGGGTCGTAGCCTGTGGCCA                                                        >  SRR4302543.4415662/1‑94 (MQ=60)
                                       CCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCA                                                        >  SRR4302543.895367/1‑94 (MQ=60)
                                       CCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCA                                                        >  SRR4302543.4415661/1‑94 (MQ=60)
                                        CGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTTGCCAG                                                       >  SRR4302543.4702700/1‑94 (MQ=60)
                                        CGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAG                                                       <  SRR4302543.5109558/94‑1 (MQ=60)
                                        CGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAG                                                       >  SRR4302543.543083/1‑94 (MQ=60)
                                         GTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGA                                                      >  SRR4302543.6025929/1‑94 (MQ=60)
                                          TCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAA                                                     <  SRR4302543.4817120/94‑1 (MQ=60)
                                           CGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAT                                                    >  SRR4302543.7635174/1‑94 (MQ=60)
                                           CGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAT                                                    <  SRR4302543.6768677/94‑1 (MQ=60)
                                           CGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAT                                                    >  SRR4302543.5565786/1‑94 (MQ=60)
                                           CGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAT                                                    >  SRR4302543.460892/1‑94 (MQ=60)
                                           CGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAT                                                    <  SRR4302543.5180397/94‑1 (MQ=60)
                                           CGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAT                                                    >  SRR4302543.7424291/1‑94 (MQ=60)
                                           CCCTGTATTTACCGCTTTCCAGCTCTTGCAATACTGCGTCCAGCACCTTATCTTTCTCCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAAT                                                    <  SRR4302543.6446320/94‑1 (MQ=60)
                                            GCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATT                                                   <  SRR4302543.4830514/94‑1 (MQ=60)
                                            GCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATT                                                   <  SRR4302543.7459057/94‑1 (MQ=60)
                                             CTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTG                                                  <  SRR4302543.2907155/94‑1 (MQ=60)
                                             CTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTG                                                  >  SRR4302543.6817021/1‑94 (MQ=60)
                                             CTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTG                                                  >  SRR4302543.3315901/1‑94 (MQ=60)
                                             CTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTG                                                  <  SRR4302543.4406639/94‑1 (MQ=60)
                                             CTGCATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTG                                                  <  SRR4302543.7217759/94‑1 (MQ=60)
                                              TGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGC                                                 >  SRR4302543.4022167/1‑94 (MQ=60)
                                              TGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGC                                                 >  SRR4302543.4022168/1‑94 (MQ=60)
                                              TGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGC                                                 >  SRR4302543.3446227/1‑94 (MQ=60)
                                               GTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCC                                                >  SRR4302543.7558220/1‑94 (MQ=60)
                                               GTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCC                                                >  SRR4302543.4952983/1‑94 (MQ=60)
                                                TATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCT                                               >  SRR4302543.7027790/1‑94 (MQ=60)
                                                 ATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTT                                              >  SRR4302543.6229957/1‑94 (MQ=60)
                                                 ATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTT                                              >  SRR4302543.1782954/1‑94 (MQ=60)
                                                 ATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTT                                              <  SRR4302543.7591191/94‑1 (MQ=60)
                                                  TTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTC                                             <  SRR4302543.714012/94‑1 (MQ=60)
                                                   TTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCA                                            <  SRR4302543.1852698/94‑1 (MQ=60)
                                                    TACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCAC                                           >  SRR4302543.4713278/1‑94 (MQ=60)
                                                    TACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCAC                                           <  SRR4302543.1944570/94‑1 (MQ=60)
                                                    TACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCAC                                           <  SRR4302543.7545597/94‑1 (MQ=60)
                                                     ACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACT                                          >  SRR4302543.2155820/1‑94 (MQ=60)
                                                      CCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTT                                         <  SRR4302543.4963391/94‑1 (MQ=60)
                                                       CGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTG                                        >  SRR4302543.711459/1‑94 (MQ=60)
                                                       CGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTG                                        >  SRR4302543.4663886/1‑94 (MQ=60)
                                                       CGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTG                                        <  SRR4302543.2254190/94‑1 (MQ=60)
                                                        GCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGT                                       >  SRR4302543.3312195/1‑94 (MQ=60)
                                                         CTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTT                                      >  SRR4302543.4718987/1‑94 (MQ=60)
                                                         CTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTT                                      >  SRR4302543.439176/1‑94 (MQ=60)
                                                           TTCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCC                                    <  SRR4302543.1649129/94‑1 (MQ=60)
                                                            TCCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCA                                   <  SRR4302543.1078761/94‑1 (MQ=60)
                                                             CCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCAC                                  >  SRR4302543.4112210/1‑94 (MQ=60)
                                                             CCAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCAC                                  <  SRR4302543.1550149/94‑1 (MQ=60)
                                                              CAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACG                                 >  SRR4302543.5887372/1‑94 (MQ=60)
                                                              CAGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGCAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACG                                 >  SRR4302543.5033828/1‑94 (MQ=60)
                                                               AGCTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGG                                >  SRR4302543.2382811/1‑94 (MQ=60)
                                                                 CTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTA                              >  SRR4302543.2417333/1‑94 (MQ=60)
                                                                 CTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTA                              <  SRR4302543.4203637/94‑1 (MQ=60)
                                                                 CTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTA                              >  SRR4302543.2894132/1‑94 (MQ=60)
                                                                 CTCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTA                              >  SRR4302543.4592629/1‑94 (MQ=60)
                                                                  TCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAT                             <  SRR4302543.4984376/94‑1 (MQ=60)
                                                                  TCTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAT                             <  SRR4302543.4238084/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.6465771/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.7753337/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.7742593/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.2528192/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.3425379/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.1522332/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            >  SRR4302543.758140/1‑94 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.4500631/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.468760/94‑1 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            >  SRR4302543.4735502/1‑94 (MQ=60)
                                                                   CTTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.70255/94‑1 (MQ=60)
                                                                   CTTTCAAGTCTGCGTCCAGCACCTTAGCTTTCTTCCGCCATTTCGCCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATG                            <  SRR4302543.1511218/94‑1 (MQ=60)
                                                                    TTTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGA                           <  SRR4302543.7594397/94‑1 (MQ=60)
                                                                     TTCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTAGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGAC                          >  SRR4302543.4196825/1‑94 (MQ=60)
                                                                      TCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACC                         >  SRR4302543.5725148/1‑94 (MQ=60)
                                                                      TCAATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACC                         >  SRR4302543.5725149/1‑94 (MQ=60)
                                                                        AATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAA                       <  SRR4302543.1716429/94‑1 (MQ=60)
                                                                        AATACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAA                       <  SRR4302543.6037824/94‑1 (MQ=60)
                                                                          TACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAA                     <  SRR4302543.4494302/94‑1 (MQ=60)
                                                                          TACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAA                     <  SRR4302543.6597433/94‑1 (MQ=60)
                                                                          TACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAA                     <  SRR4302543.1283139/94‑1 (MQ=60)
                                                                           ACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAA                    <  SRR4302543.2624132/94‑1 (MQ=60)
                                                                           ACTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAA                    <  SRR4302543.747731/94‑1 (MQ=60)
                                                                            CTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAT                   <  SRR4302543.3331698/94‑1 (MQ=60)
                                                                            CTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAT                   <  SRR4302543.5593875/94‑1 (MQ=60)
                                                                            CTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAT                   <  SRR4302543.7834855/94‑1 (MQ=60)
                                                                            CTGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAT                   >  SRR4302543.5592839/1‑94 (MQ=60)
                                                                             TGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATA                  >  SRR4302543.5768956/1‑94 (MQ=60)
                                                                             TGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATA                  >  SRR4302543.5768960/1‑94 (MQ=60)
                                                                             TGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATA                  <  SRR4302543.784644/94‑1 (MQ=60)
                                                                             TGCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATA                  <  SRR4302543.5107478/94‑1 (MQ=60)
                                                                              GCGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAA                 <  SRR4302543.6012677/94‑1 (MQ=60)
                                                                               CGTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAA                <  SRR4302543.7262934/94‑1 (MQ=60)
                                                                                GTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAG               <  SRR4302543.4952258/94‑1 (MQ=60)
                                                                                GTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAG               >  SRR4302543.796939/1‑94 (MQ=60)
                                                                                GTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAG               >  SRR4302543.3716268/1‑94 (MQ=60)
                                                                                GTCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAG               >  SRR4302543.5225774/1‑94 (MQ=60)
                                                                                 TCCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGA              >  SRR4302543.5692034/1‑94 (MQ=60)
                                                                                  CCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGAT             >  SRR4302543.7899287/1‑94 (MQ=60)
                                                                                  CCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGAT             >  SRR4302543.5338914/1‑94 (MQ=60)
                                                                                  CCAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGAT             <  SRR4302543.5485151/94‑1 (MQ=60)
                                                                                   CAGCGCCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATA            <  SRR4302543.6159424/94‑1 (MQ=60)
                                                                                   CAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATA            <  SRR4302543.3680466/94‑1 (MQ=60)
                                                                                   CAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATA            <  SRR4302543.5760575/94‑1 (MQ=60)
                                                                                   CAGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATA            <  SRR4302543.7965726/94‑1 (MQ=60)
                                                                                    cgccCCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAT           <  SRR4302543.81235/90‑1 (MQ=60)
                                                                                    AGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAT           >  SRR4302543.1982728/1‑94 (MQ=60)
                                                                                    AGCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATAT           <  SRR4302543.5216459/94‑1 (MQ=60)
                                                                                     GCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATT          <  SRR4302543.350756/94‑1 (MQ=60)
                                                                                     GCACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATT          <  SRR4302543.1485424/94‑1 (MQ=60)
                                                                                      CACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTT         <  SRR4302543.1106060/94‑1 (MQ=60)
                                                                                      CACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTT         >  SRR4302543.4341148/1‑94 (MQ=60)
                                                                                      CACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTT         <  SRR4302543.15479/94‑1 (MQ=60)
                                                                                       CCCTTAACTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTT        <  SRR4302543.6025936/94‑1 (MQ=60)
                                                                                       ACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTT        >  SRR4302543.5850319/1‑94 (MQ=60)
                                                                                       ACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTT        >  SRR4302543.2341635/1‑94 (MQ=60)
                                                                                       ACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTT        <  SRR4302543.6508552/94‑1 (MQ=60)
                                                                                       ACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTT        <  SRR4302543.1921590/94‑1 (MQ=60)
                                                                                       ACCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTT        >  SRR4302543.2083604/1‑94 (MQ=60)
                                                                                        CCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTC       >  SRR4302543.346708/1‑94 (MQ=60)
                                                                                        CCTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAAAAAAGATATTTTC       <  SRR4302543.5870703/94‑1 (MQ=60)
                                                                                         CTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCT      >  SRR4302543.5277812/1‑94 (MQ=60)
                                                                                         CTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCT      >  SRR4302543.867552/1‑94 (MQ=60)
                                                                                         CTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCT      <  SRR4302543.6541926/94‑1 (MQ=60)
                                                                                         CTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCT      >  SRR4302543.2240457/1‑94 (MQ=60)
                                                                                         CTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCT      >  SRR4302543.6900328/1‑94 (MQ=60)
                                                                                         CTTATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCT      >  SRR4302543.4448352/1‑94 (MQ=60)
                                                                                           TATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTC    <  SRR4302543.2127112/94‑1 (MQ=60)
                                                                                            ATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCA   >  SRR4302543.4496968/1‑94 (MQ=60)
                                                                                            ATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCA   <  SRR4302543.4515412/94‑1 (MQ=60)
                                                                                            ATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCA   >  SRR4302543.4282763/1‑94 (MQ=60)
                                                                                            ATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCA   <  SRR4302543.6751591/94‑1 (MQ=60)
                                                                                            ATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCA   <  SRR4302543.5029279/94‑1 (MQ=60)
                                                                                            ATCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTAGGACCAAAAATAAAGATATTTTCTTCA   >  SRR4302543.4519416/1‑94 (MQ=60)
                                                                                             TCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCAC  >  SRR4302543.1407156/1‑94 (MQ=60)
                                                                                             TCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCAC  <  SRR4302543.8002157/94‑1 (MQ=60)
                                                                                             TCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCAC  <  SRR4302543.6435811/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCGATACTGTGCAGCATCTGGTCGAAGGCATGCTTATCGCCGTCGCTGTATTTACCGCTTTCCAGCTCTTTCAATACTGCGTCCAGCACCTTACCTTTCTTCCGCCATTTCACCGGGTCGTAGCCTTTGGCCAGAATTGCCTTCACTTGTTCCACGGTATGACCAAAAATAAAGATATTTTCTTCAC  >  NC_000913/3547912‑3548098

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑