Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,875,855 G→A N631N (AAC→AAT)  gyrB ← DNA gyrase subunit B

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,875,8550GA100.0% 1669.7 / NA 462N631N (AAC→AAT) gyrBDNA gyrase subunit B
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (220/242);  total (220/242)

Only 100 of 475 total aligned reads displayed.

CTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCGTTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGG  >  NC_000913/3875765‑3875944
                                                                                          |                                                                                         
cTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCAtt                                                                                         <  2:5881160/93‑1 (MQ=255)
 tCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTc                                                                                        >  2:6705077/1‑93 (MQ=255)
  cGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCa                                                                                       <  1:6658748/93‑1 (MQ=255)
  cGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCa                                                                                       <  2:2599547/93‑1 (MQ=255)
  cGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCa                                                                                       <  2:5239602/93‑1 (MQ=255)
   gAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCAc                                                                                      >  2:4148994/1‑93 (MQ=255)
   gAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCAc                                                                                      >  2:4285148/1‑93 (MQ=255)
     aCAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCAccc                                                                                    >  1:7818005/1‑93 (MQ=255)
        gtttttGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGc                                                                                 <  2:3198540/91‑1 (MQ=255)
        ggTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGc                                                                                 >  1:7477785/1‑93 (MQ=255)
           tttGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCggg                                                                              <  2:4868736/93‑1 (MQ=255)
           tttGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCggg                                                                              <  2:4580525/93‑1 (MQ=255)
            ttGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGt                                                                             >  2:2683015/1‑93 (MQ=255)
             tGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTa                                                                            >  1:5559218/1‑93 (MQ=255)
             tGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTa                                                                            >  2:6479719/1‑93 (MQ=255)
             tGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTa                                                                            <  1:7902967/93‑1 (MQ=255)
               cTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAAc                                                                          <  2:4733411/93‑1 (MQ=255)
                   gCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTc                                                                      <  2:3878465/93‑1 (MQ=255)
                    cATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCt                                                                     <  2:4518937/93‑1 (MQ=255)
                    cATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCt                                                                     <  1:4886728/93‑1 (MQ=255)
                     aTTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTg                                                                    >  2:118238/1‑93 (MQ=255)
                     aTTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTg                                                                    >  2:6281760/1‑93 (MQ=255)
                     aTTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTg                                                                    >  1:3898290/1‑93 (MQ=255)
                     aTTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTg                                                                    >  1:1963401/1‑93 (MQ=255)
                     aTTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTg                                                                    >  2:2781298/1‑93 (MQ=255)
                      ttGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGc                                                                   <  2:1106725/93‑1 (MQ=255)
                      ttGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGc                                                                   <  1:4506439/93‑1 (MQ=255)
                      ttGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGc                                                                   <  2:1815104/93‑1 (MQ=255)
                      ttGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGc                                                                   <  1:541014/93‑1 (MQ=255)
                        ggTGTGATCATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCtc                                                                 >  2:4795794/1‑93 (MQ=255)
                         gtgtGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCtca                                                                <  1:1001461/93‑1 (MQ=255)
                          tgtgAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCtcat                                                               <  1:6385541/93‑1 (MQ=255)
                           gtgAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCtcatc                                                              <  2:5850593/93‑1 (MQ=255)
                           gtgAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCtcatc                                                              >  1:2157026/1‑93 (MQ=255)
                           gtgAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCtcatc                                                              >  2:1488104/1‑93 (MQ=255)
                            tgAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCtcatca                                                             <  1:6067683/93‑1 (MQ=255)
                               aCATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGaa                                                          <  1:185995/93‑1 (MQ=255)
                               aCATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGaa                                                          >  2:6909984/1‑93 (MQ=255)
                                cATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGaaa                                                         >  2:3157638/1‑93 (MQ=255)
                                cATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGaaa                                                         <  2:7617364/93‑1 (MQ=255)
                                cATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGaaa                                                         <  1:4992441/93‑1 (MQ=255)
                                cATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGaaa                                                         <  2:6635588/93‑1 (MQ=255)
                                 aTCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAg                                                        <  2:735260/93‑1 (MQ=255)
                                   cAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGt                                                      <  1:2636196/93‑1 (MQ=255)
                                    aaaCTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTc                                                     >  1:2980791/1‑93 (MQ=255)
                                    aaaCTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTc                                                     <  2:7746870/93‑1 (MQ=255)
                                    aaaCTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTc                                                     <  1:5182675/93‑1 (MQ=255)
                                     aaCTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCa                                                    >  1:3508359/1‑93 (MQ=255)
                                     aaCTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCa                                                    >  2:6008539/1‑93 (MQ=255)
                                       cTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTTACCAGCGTATTCACCCAGCGGGTAACGGTCTGCTCAGCAGAAAGGTCAGc                                                  <  2:5513977/93‑1 (MQ=255)
                                          ccACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTc                                               >  2:2340937/1‑93 (MQ=255)
                                           cACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTcc                                              <  1:5610673/93‑1 (MQ=255)
                                           cACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTcc                                              >  2:1607061/1‑93 (MQ=255)
                                            aCTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCg                                             >  2:5448355/1‑93 (MQ=255)
                                             cTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGt                                            <  1:2464545/93‑1 (MQ=255)
                                             cTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGt                                            <  2:5624856/93‑1 (MQ=255)
                                              tGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTc                                           >  2:6158091/1‑93 (MQ=255)
                                              tGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTc                                           <  2:705031/93‑1 (MQ=255)
                                                gCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCaa                                         <  1:4699035/93‑1 (MQ=255)
                                                gCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCaa                                         <  1:5378270/93‑1 (MQ=255)
                                                  tGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACg                                       >  2:744002/1‑93 (MQ=255)
                                                  tGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACg                                       >  1:1098484/1‑93 (MQ=255)
                                                  tGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACg                                       <  2:1999608/93‑1 (MQ=255)
                                                   gCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAATGTCAGCTTCCGTCAACGt                                      <  2:3002686/93‑1 (MQ=255)
                                                    ccGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTc                                     <  1:3801311/93‑1 (MQ=255)
                                                    ccGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTc                                     <  1:7427288/93‑1 (MQ=255)
                                                     cGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCg                                    <  1:3060644/93‑1 (MQ=255)
                                                       tGCTGTTCTTTTTCGTTCAGTTCGCTGGCCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCTGTCAACGTCGGc                                  <  1:5206063/93‑1 (MQ=255)
                                                       tGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCATCTTCCGTCAACGTCGGc                                  >  1:7020863/1‑93 (MQ=255)
                                                       tGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGc                                  >  2:3743723/1‑93 (MQ=255)
                                                       tGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGc                                  >  2:6789912/1‑93 (MQ=255)
                                                       tGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGc                                  >  1:5898613/1‑93 (MQ=255)
                                                          tGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTga                               <  2:3477199/93‑1 (MQ=255)
                                                          tGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTga                               <  2:100641/93‑1 (MQ=255)
                                                          tGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTga                               >  1:5734229/1‑93 (MQ=255)
                                                           gTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTgat                              >  2:5008775/1‑93 (MQ=255)
                                                             tCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTgatag                            >  1:6844452/1‑93 (MQ=255)
                                                                tggTCGTGCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTgatagata                         <  1:4014133/91‑1 (MQ=255)
                                                                 tGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATaa                        <  1:7152868/93‑1 (MQ=255)
                                                                 tGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATaa                        <  2:1330536/93‑1 (MQ=255)
                                                                 tGTCGCTCACTTCGCTGACCAGCGCATGCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATaa                        <  1:1607141/93‑1 (MQ=255)
                                                                  gTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAg                       <  2:5112936/93‑1 (MQ=255)
                                                                    cGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGct                     <  1:1362187/93‑1 (MQ=255)
                                                                      ttCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGctct                   <  1:6576748/93‑1 (MQ=255)
                                                                      ttCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGctct                   >  2:3323366/1‑93 (MQ=255)
                                                                      ttCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGctct                   >  1:3602306/1‑93 (MQ=255)
                                                                       tCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCtt                  <  1:2839996/93‑1 (MQ=255)
                                                                        cAGTTCGCTCACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCttt                 <  2:4367647/93‑1 (MQ=255)
                                                                         aGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTc                <  2:7277249/93‑1 (MQ=255)
                                                                          gTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCa               <  1:1526019/93‑1 (MQ=255)
                                                                             cGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCa            <  2:2180260/93‑1 (MQ=255)
                                                                              gCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCAt           >  2:5743256/1‑93 (MQ=255)
                                                                                tGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTg         <  1:3660992/93‑1 (MQ=255)
                                                                                 gACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTgt        >  1:2319600/1‑92 (MQ=255)
                                                                                 gACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGc        <  1:2247707/93‑1 (MQ=255)
                                                                                 gACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGc        <  1:64191/93‑1 (MQ=255)
                                                                                  aCCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCt       >  2:7102052/1‑93 (MQ=255)
                                                                                    cAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCttt     <  2:3998152/93‑1 (MQ=255)
                                                                                     aGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTc    >  1:4179323/1‑93 (MQ=255)
                                                                                      gcgcATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCg   <  2:7827422/93‑1 (MQ=255)
                                                                                          |                                                                                         
CTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCGTTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGG  >  NC_000913/3875765‑3875944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 236 total aligned reads displayed.
CGGCTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCGTTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGATAA  >  NC_000913/3875762‑3875948
                                                                                             |                                                                                             
CGGCTCGAACAGGTTTTGCTTAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCA                                                                                               >  SRR4302543.5584403/1‑94 (MQ=60)
CGGCTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCA                                                                                               >  SRR4302543.6986864/1‑94 (MQ=60)
CGGCTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCA                                                                                               <  SRR4302543.6482550/94‑1 (MQ=60)
  GCTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATT                                                                                             <  SRR4302543.2842407/94‑1 (MQ=60)
  GCGCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTTGCTGCCGGGCTGTTCTTGGTCGTTCAGTTCGCTGACCAGCGCATT                                                                                             <  SRR4302543.5447780/94‑1 (MQ=60)
   CTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTC                                                                                            <  SRR4302543.2316841/94‑1 (MQ=60)
   CTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTC                                                                                            <  SRR4302543.4573832/94‑1 (MQ=60)
   CTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTC                                                                                            >  SRR4302543.3083777/1‑94 (MQ=60)
   CCCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTC                                                                                            <  SRR4302543.5523673/94‑1 (MQ=60)
     CGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCAC                                                                                          <  SRR4302543.6721619/94‑1 (MQ=60)
     CGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCAC                                                                                          <  SRR4302543.3209490/94‑1 (MQ=60)
       AACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCC                                                                                        >  SRR4302543.3804288/1‑94 (MQ=60)
         CAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAG                                                                                      >  SRR4302543.3781100/1‑94 (MQ=60)
         CAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAG                                                                                      <  SRR4302543.1739928/94‑1 (MQ=60)
         CAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAG                                                                                      >  SRR4302543.7821392/1‑94 (MQ=60)
         CAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAG                                                                                      >  SRR4302543.3861103/1‑94 (MQ=60)
          AGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGC                                                                                     >  SRR4302543.7549368/1‑94 (MQ=60)
           GGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCG                                                                                    >  SRR4302543.420759/1‑94 (MQ=60)
           GGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCG                                                                                    <  SRR4302543.2780497/94‑1 (MQ=60)
           GGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCG                                                                                    >  SRR4302543.5248741/1‑94 (MQ=60)
           GGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCG                                                                                    >  SRR4302543.2953842/1‑94 (MQ=60)
            ggtgTGCTCTGCATTGGTGTGAACATCAACCTTCCACTGGCTGCCGGGCTATTCGTTGGCGTTCAGTTCGCGGACCAGCGCATTCACCCAGCGG                                                                                   <  SRR4302543.5335102/90‑1 (MQ=57)
            GTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGG                                                                                   <  SRR4302543.5638376/94‑1 (MQ=60)
            GTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGG                                                                                   >  SRR4302543.3649892/1‑94 (MQ=60)
            GTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGG                                                                                   <  SRR4302543.5335103/94‑1 (MQ=60)
             TTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGG                                                                                  <  SRR4302543.2047050/94‑1 (MQ=60)
              TTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGT                                                                                 >  SRR4302543.3951904/1‑94 (MQ=60)
              TTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGT                                                                                 >  SRR4302543.4412488/1‑94 (MQ=60)
              TTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGA                                                                                 >  SRR4302543.2599803/1‑94 (MQ=60)
               TTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTA                                                                                >  SRR4302543.7279582/1‑94 (MQ=60)
                TGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAA                                                                               >  SRR4302543.7254468/1‑94 (MQ=60)
                TGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAA                                                                               <  SRR4302543.7977243/94‑1 (MQ=60)
                  CTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACG                                                                             <  SRR4302543.6457574/94‑1 (MQ=60)
                  CTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACG                                                                             >  SRR4302543.7213704/1‑94 (MQ=60)
                     AGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTC                                                                          <  SRR4302543.2863929/94‑1 (MQ=60)
                      GCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCT                                                                         >  SRR4302543.6727674/1‑94 (MQ=60)
                      GCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCT                                                                         <  SRR4302543.7134260/94‑1 (MQ=60)
                       CATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTG                                                                        <  SRR4302543.1910651/94‑1 (MQ=60)
                       CATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTG                                                                        >  SRR4302543.4603788/1‑94 (MQ=60)
                       CATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTG                                                                        <  SRR4302543.4931269/94‑1 (MQ=60)
                       CATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTG                                                                        >  SRR4302543.3932716/1‑94 (MQ=60)
                       CATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTG                                                                        >  SRR4302543.1981010/1‑94 (MQ=60)
                       CATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTG                                                                        >  SRR4302543.1981003/1‑94 (MQ=60)
                        ATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGC                                                                       >  SRR4302543.2269805/1‑94 (MQ=60)
                        ATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGC                                                                       >  SRR4302543.6874365/1‑94 (MQ=60)
                         TTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCT                                                                      <  SRR4302543.2480673/94‑1 (MQ=60)
                         TTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCT                                                                      <  SRR4302543.314062/94‑1 (MQ=60)
                         TTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCT                                                                      <  SRR4302543.546021/94‑1 (MQ=60)
                         TTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCT                                                                      <  SRR4302543.4547416/94‑1 (MQ=60)
                          TGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTC                                                                     <  SRR4302543.3639247/94‑1 (MQ=60)
                          TGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGGAACGGTCTGCTC                                                                     >  SRR4302543.6969773/1‑94 (MQ=60)
                           GGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCA                                                                    <  SRR4302543.5203130/94‑1 (MQ=60)
                           GGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCA                                                                    >  SRR4302543.6251750/1‑94 (MQ=60)
                            GTTTGAACATCAACCCTCCACTGTCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCAT                                                                   <  SRR4302543.1010308/94‑1 (MQ=60)
                            GTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCAT                                                                   <  SRR4302543.1010307/94‑1 (MQ=60)
                             TGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATC                                                                  <  SRR4302543.6445645/94‑1 (MQ=60)
                             TGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATC                                                                  >  SRR4302543.2176341/1‑94 (MQ=60)
                              GTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCA                                                                 <  SRR4302543.2307193/94‑1 (MQ=60)
                              GTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCA                                                                 <  SRR4302543.224388/94‑1 (MQ=60)
                              GTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCA                                                                 >  SRR4302543.1410706/1‑94 (MQ=60)
                                GAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGA                                                               >  SRR4302543.3554642/1‑94 (MQ=60)
                                 AACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAA                                                              >  SRR4302543.3631850/1‑94 (MQ=60)
                                  ACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAA                                                             <  SRR4302543.187575/94‑1 (MQ=60)
                                   CATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAG                                                            >  SRR4302543.2563009/1‑94 (MQ=60)
                                   CATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAG                                                            <  SRR4302543.5037885/94‑1 (MQ=60)
                                    ATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCTGCGGGTACCGGTCTGCTCCTCCGAAAGG                                                           >  SRR4302543.3906224/1‑94 (MQ=60)
                                    ATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGG                                                           >  SRR4302543.7041073/1‑94 (MQ=60)
                                     TCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGT                                                          <  SRR4302543.4859304/94‑1 (MQ=60)
                                      CAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTGACCCACCGGGTAACCGGCTGCTCATCAGAAAGGcg                                                         >  SRR4302543.656112/1‑92 (MQ=60)
                                      CAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTC                                                         <  SRR4302543.2660070/94‑1 (MQ=60)
                                      CAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTC                                                         <  SRR4302543.610643/94‑1 (MQ=60)
                                      CAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTC                                                         <  SRR4302543.1046464/94‑1 (MQ=60)
                                      CAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTC                                                         >  SRR4302543.3007860/1‑94 (MQ=60)
                                       AAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCA                                                        >  SRR4302543.3050133/1‑94 (MQ=60)
                                       AAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCA                                                        >  SRR4302543.3643029/1‑94 (MQ=60)
                                       AAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCA                                                        >  SRR4302543.3539717/1‑94 (MQ=60)
                                       AAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCA                                                        <  SRR4302543.162071/94‑1 (MQ=60)
                                       AAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCA                                                        <  SRR4302543.5229443/94‑1 (MQ=60)
                                        AACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAG                                                       <  SRR4302543.5209988/94‑1 (MQ=60)
                                        AACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAG                                                       >  SRR4302543.4894756/1‑94 (MQ=60)
                                        AACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAG                                                       <  SRR4302543.4960197/94‑1 (MQ=60)
                                        AACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAG                                                       <  SRR4302543.207737/94‑1 (MQ=60)
                                         ACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGC                                                      >  SRR4302543.4814530/1‑94 (MQ=60)
                                         ACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGC                                                      >  SRR4302543.7950282/1‑94 (MQ=60)
                                         ACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGC                                                      >  SRR4302543.360949/1‑94 (MQ=60)
                                          CTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCT                                                     >  SRR4302543.5609891/1‑94 (MQ=60)
                                           TTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTT                                                    >  SRR4302543.6415464/1‑94 (MQ=60)
                                           TTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTT                                                    >  SRR4302543.2919643/1‑94 (MQ=60)
                                            TCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTC                                                   <  SRR4302543.5738390/94‑1 (MQ=60)
                                             CCACTGGCTGCCGTTCTGTTCTTTGTCGTTCATTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCC                                                  <  SRR4302543.142968/94‑1 (MQ=60)
                                             CCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCC                                                  <  SRR4302543.5439600/94‑1 (MQ=60)
                                             CCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCC                                                  >  SRR4302543.2208888/1‑94 (MQ=60)
                                              CACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCG                                                 >  SRR4302543.2068075/1‑94 (MQ=60)
                                              CACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCG                                                 <  SRR4302543.5661797/94‑1 (MQ=60)
                                              CACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCG                                                 >  SRR4302543.5470679/1‑94 (MQ=60)
                                              CACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCG                                                 >  SRR4302543.5231017/1‑94 (MQ=60)
                                                CTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTC                                               <  SRR4302543.1227737/94‑1 (MQ=60)
                                                CTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTC                                               >  SRR4302543.5958577/1‑94 (MQ=60)
                                                CTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTC                                               <  SRR4302543.2486778/94‑1 (MQ=60)
                                                CTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTA                                               >  SRR4302543.6665998/1‑94 (MQ=60)
                                                 TGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCA                                              >  SRR4302543.2180194/1‑94 (MQ=60)
                                                   GCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAAC                                            <  SRR4302543.5427020/94‑1 (MQ=60)
                                                   GCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAAC                                            <  SRR4302543.1001497/94‑1 (MQ=60)
                                                   GCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAAC                                            <  SRR4302543.4741948/94‑1 (MQ=60)
                                                   GCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAAC                                            <  SRR4302543.4373762/94‑1 (MQ=60)
                                                   GCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAAC                                            <  SRR4302543.7516337/94‑1 (MQ=60)
                                                   GCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAAC                                            <  SRR4302543.6114775/94‑1 (MQ=60)
                                                   GCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAAC                                            <  SRR4302543.29501/94‑1 (MQ=60)
                                                    CTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACG                                           >  SRR4302543.1108375/1‑94 (MQ=60)
                                                    CTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACG                                           <  SRR4302543.6422839/94‑1 (MQ=60)
                                                     TGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGT                                          >  SRR4302543.6475097/1‑94 (MQ=60)
                                                       CCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCG                                        >  SRR4302543.5647687/1‑94 (MQ=60)
                                                       CCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCG                                        <  SRR4302543.7498505/94‑1 (MQ=60)
                                                       CCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCG                                        <  SRR4302543.3834806/94‑1 (MQ=60)
                                                       CCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCG                                        <  SRR4302543.3834805/94‑1 (MQ=60)
                                                       CCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCG                                        >  SRR4302543.6461999/1‑94 (MQ=60)
                                                        CGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGG                                       >  SRR4302543.4468821/1‑94 (MQ=60)
                                                        CGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGG                                       <  SRR4302543.1393293/94‑1 (MQ=60)
                                                        CGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGG                                       <  SRR4302543.3088179/94‑1 (MQ=60)
                                                         GTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGC                                      >  SRR4302543.4040624/1‑94 (MQ=60)
                                                         GTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGC                                      >  SRR4302543.5952420/1‑94 (MQ=60)
                                                         GTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGC                                      >  SRR4302543.1260871/1‑94 (MQ=60)
                                                         CTGCTTTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGC                                      <  SRR4302543.5656556/94‑1 (MQ=60)
                                                          TGCTGTTCTTTTTCGTTCAGTTCGCTGGCCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCTGTCAACGTCGGCT                                     <  SRR4302543.5252985/94‑1 (MQ=60)
                                                          TGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCT                                     >  SRR4302543.7716750/1‑94 (MQ=60)
                                                          TGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCT                                     >  SRR4302543.5806636/1‑94 (MQ=60)
                                                          TGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCT                                     >  SRR4302543.7996364/1‑94 (MQ=60)
                                                          TGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCT                                     <  SRR4302543.1569772/94‑1 (MQ=60)
                                                          TGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCT                                     <  SRR4302543.5252984/94‑1 (MQ=60)
                                                          GGCTGTTCTTTGTCGTTCAGTTCTCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCT                                     <  SRR4302543.4086826/94‑1 (MQ=60)
                                                           GCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTG                                    <  SRR4302543.7533206/94‑1 (MQ=60)
                                                           GCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTG                                    >  SRR4302543.1007507/1‑94 (MQ=60)
                                                            CTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGA                                   >  SRR4302543.6707182/1‑94 (MQ=60)
                                                            CTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGA                                   >  SRR4302543.5786542/1‑94 (MQ=60)
                                                             TGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGAT                                  <  SRR4302543.1901081/94‑1 (MQ=60)
                                                             TGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGAT                                  >  SRR4302543.1161924/1‑94 (MQ=60)
                                                              GTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATA                                 >  SRR4302543.338627/1‑94 (MQ=60)
                                                              GTTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATA                                 >  SRR4302543.67658/1‑94 (MQ=60)
                                                               TTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAG                                <  SRR4302543.3077885/94‑1 (MQ=60)
                                                               TTCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAG                                >  SRR4302543.5836006/1‑94 (MQ=60)
                                                                TCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGA                               >  SRR4302543.7724041/1‑94 (MQ=60)
                                                                TCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGA                               <  SRR4302543.2693539/94‑1 (MQ=60)
                                                                TCTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGCCAGCTTCCGTCAACGTCGGCTGATAGA                               >  SRR4302543.5094600/1‑94 (MQ=60)
                                                                 CTTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGAT                              <  SRR4302543.2563980/94‑1 (MQ=60)
                                                                  TTTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATA                             <  SRR4302543.2705509/94‑1 (MQ=60)
                                                                   TTGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAA                            <  SRR4302543.7543416/94‑1 (MQ=60)
                                                                    TGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAG                           <  SRR4302543.7222386/94‑1 (MQ=60)
                                                                    TGTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAG                           <  SRR4302543.1621475/94‑1 (MQ=60)
                                                                     GTCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGC                          <  SRR4302543.7129165/94‑1 (MQ=60)
                                                                      TCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCT                         >  SRR4302543.6651759/1‑94 (MQ=60)
                                                                      TCGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCT                         >  SRR4302543.729170/1‑94 (MQ=60)
                                                                       CGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTC                        >  SRR4302543.1565747/1‑94 (MQ=60)
                                                                       CGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTC                        <  SRR4302543.1374394/94‑1 (MQ=60)
                                                                       CGTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTC                        >  SRR4302543.5731150/1‑94 (MQ=60)
                                                                        GTTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCT                       >  SRR4302543.3634093/1‑94 (MQ=60)
                                                                         TTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTT                      >  SRR4302543.2406527/1‑94 (MQ=60)
                                                                         TTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTT                      <  SRR4302543.6638677/94‑1 (MQ=60)
                                                                         TTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTT                      <  SRR4302543.4927684/94‑1 (MQ=60)
                                                                         TTCAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTT                      <  SRR4302543.5482312/94‑1 (MQ=60)
                                                                         TTCAGTTCGCTGACAAGCCCATTCCCCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTT                      <  SRR4302543.4047889/94‑1 (MQ=60)
                                                                           CAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTC                    >  SRR4302543.3138368/1‑94 (MQ=60)
                                                                           CAGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTC                    <  SRR4302543.5991874/94‑1 (MQ=60)
                                                                            AGTTCGTGGACCAGCGCATTCACCCAGCGGGAAACGGTCTGCTCTGCATAAAGGTCAGTTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCA                   <  SRR4302543.1617303/94‑1 (MQ=60)
                                                                            AGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCA                   <  SRR4302543.4630863/94‑1 (MQ=60)
                                                                            AGTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCA                   <  SRR4302543.3730022/94‑1 (MQ=60)
                                                                            AGTGCGCTGACCAGCGCGTTCACCGAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCA                   <  SRR4302543.5430498/94‑1 (MQ=60)
                                                                             GTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAG                  <  SRR4302543.1539716/94‑1 (MQ=60)
                                                                             GTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAG                  >  SRR4302543.4008122/1‑94 (MQ=60)
                                                                             GTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAG                  <  SRR4302543.574307/94‑1 (MQ=60)
                                                                             GTTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAG                  >  SRR4302543.5325601/1‑94 (MQ=60)
                                                                             GTTCGCTGACCAGCGCATGCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAG                  <  SRR4302543.7908082/94‑1 (MQ=60)
                                                                              TTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGC                 <  SRR4302543.5368405/94‑1 (MQ=60)
                                                                              TTCGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGC                 <  SRR4302543.5084974/94‑1 (MQ=60)
                                                                                CGCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCAT               <  SRR4302543.691148/94‑1 (MQ=60)
                                                                                 GCTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATT              <  SRR4302543.225294/94‑1 (MQ=60)
                                                                                  ctgtaCAGCGCATTCCCCCAGCGGGTAACGGTCTGCTCATCAGAAATGTCAGCTTCCTTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTG             <  SRR4302543.6516467/89‑1 (MQ=60)
                                                                                  CTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTG             >  SRR4302543.6855168/1‑94 (MQ=60)
                                                                                  CTGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTG             <  SRR4302543.644336/94‑1 (MQ=60)
                                                                                   TGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGT            >  SRR4302543.2340687/1‑94 (MQ=60)
                                                                                   TGACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGC            <  SRR4302543.3693143/94‑1 (MQ=60)
                                                                                    GACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCT           <  SRR4302543.2422249/94‑1 (MQ=60)
                                                                                    GACCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCT           <  SRR4302543.64760/94‑1 (MQ=60)
                                                                                     ACCAGCGCATTCCCCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTT          <  SRR4302543.6631840/94‑1 (MQ=60)
                                                                                      CCAGCGCATTCGCCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTT         <  SRR4302543.4067043/94‑1 (MQ=60)
                                                                                      CCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTT         >  SRR4302543.5520390/1‑94 (MQ=60)
                                                                                      CCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTT         <  SRR4302543.156793/94‑1 (MQ=60)
                                                                                      CCAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTT         <  SRR4302543.1662281/94‑1 (MQ=60)
                                                                                       CAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGGAAGGTCAGCTTCCGTCACCGTCGGCTGATAGGTACGCTCTTTCAGaacgtctttc        >  SRR4302543.5004422/1‑84 (MQ=60)
                                                                                       CAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTC        >  SRR4302543.4217190/1‑94 (MQ=60)
                                                                                       CAGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTC        >  SRR4302543.5004423/1‑94 (MQ=60)
                                                                                        AGCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGATCTTTCAGCATTGCTTTCG       >  SRR4302543.7966874/1‑94 (MQ=60)
                                                                                         GCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGG      >  SRR4302543.7030609/1‑94 (MQ=60)
                                                                                         GCGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCACCATTGCTTTCGG      <  SRR4302543.7857509/94‑1 (MQ=60)
                                                                                          CGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGA     >  SRR4302543.1246721/1‑94 (MQ=60)
                                                                                          CGCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGA     >  SRR4302543.1246719/1‑94 (MQ=60)
                                                                                           GCATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGAT    >  SRR4302543.7499186/1‑94 (MQ=60)
                                                                                            CATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGATA   >  SRR4302543.6187265/1‑94 (MQ=60)
                                                                                            CATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGATA   >  SRR4302543.1422210/1‑94 (MQ=60)
                                                                                            CATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGATA   >  SRR4302543.1051520/1‑94 (MQ=60)
                                                                                             ATTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGCCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGATAA  >  SRR4302543.5131403/1‑94 (MQ=60)
                                                                                             |                                                                                             
CGGCTCGAACAGGTTTTGCTCAGCATTGGTGTGAACATCAAACTTCCACTGGCTGCCGTGCTGTTCTTTGTCGTTCAGTTCGCTGACCAGCGCGTTCACCCAGCGGGTAACGGTCTGCTCATCAGAAAGGTCAGCTTCCGTCAACGTCGGCTGATAGATAAGCTCTTTCAGCATTGCTTTCGGATAA  >  NC_000913/3875762‑3875948

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑