Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,965,229 A→G I400V (ATT→GTT)  rho → transcription termination factor Rho

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,965,2290AG99.8% 1286.6 / ‑5.2 403I400V (ATT→GTT) rhotranscription termination factor Rho
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base G (213/189);  total (214/189)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.34e-01

Only 100 of 406 total aligned reads displayed.

CTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGT  >  NC_000913/3965139‑3965318
                                                                                          |                                                                                         
 tgctCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTta                                                                                        >  1:4181587/1‑93 (MQ=255)
 tgctCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTta                                                                                        >  2:1449925/1‑93 (MQ=255)
   ctCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTtaat                                                                                      <  2:2875329/93‑1 (MQ=255)
    tCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTtaata                                                                                     <  1:3416011/93‑1 (MQ=255)
     cACGACTCAGGAAGAACTGCAGAGAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTtaataa                                                                                    <  2:5651630/93‑1 (MQ=255)
     cACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTtaataa                                                                                    <  2:1923753/93‑1 (MQ=255)
     cACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTtaataa                                                                                    <  2:7432144/93‑1 (MQ=255)
      aCGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATaaa                                                                                   <  2:3488388/93‑1 (MQ=255)
          cTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTgg                                                                               >  2:1546435/1‑93 (MQ=255)
           tCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGc                                                                              >  1:1762753/1‑93 (MQ=255)
           tCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGc                                                                              >  2:2537649/1‑93 (MQ=255)
             aGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCaa                                                                            <  2:1352189/93‑1 (MQ=255)
             aGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCaa                                                                            >  1:6453395/1‑93 (MQ=255)
              ggAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAt                                                                           <  1:5035046/93‑1 (MQ=255)
              ggAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAt                                                                           >  1:7437230/1‑93 (MQ=255)
               gaagaaCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATg                                                                          >  2:6879239/1‑93 (MQ=255)
                  gaaCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgacc                                                                       >  1:3832662/1‑93 (MQ=255)
                  gaaCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgacc                                                                       >  1:4371033/1‑93 (MQ=255)
                    aCTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaa                                                                     <  1:2551332/93‑1 (MQ=255)
                     cTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaag                                                                    >  1:5915260/1‑93 (MQ=255)
                      tGCAGAAAATGTGGATCCTGCGCAAAATCATTCACGCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaaga                                                                   <  1:3121930/93‑1 (MQ=255)
                      tGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaaga                                                                   <  1:2493760/93‑1 (MQ=255)
                         aGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaagacca                                                                <  2:3960041/93‑1 (MQ=255)
                          gAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATgaccaagaccaa                                                               >  1:7578734/1‑93 (MQ=255)
                            aaaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATCCCTCGTTAATAAACTGGCAATGACCAAGACCAATg                                                             <  2:4874426/93‑1 (MQ=255)
                             aaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGa                                                            >  2:4331673/1‑93 (MQ=255)
                             aaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGa                                                            <  1:3670448/93‑1 (MQ=255)
                             aaTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGa                                                            <  2:7304642/93‑1 (MQ=255)
                              aTGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAc                                                           >  2:7501760/1‑93 (MQ=255)
                               tgtgGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACg                                                          >  2:7538957/1‑93 (MQ=255)
                                gtgGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGa                                                         <  2:7182246/93‑1 (MQ=255)
                                gtgGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGa                                                         <  2:3982410/93‑1 (MQ=255)
                                gtgGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGa                                                         <  1:683704/93‑1 (MQ=255)
                                   gATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAttt                                                      <  1:4812093/93‑1 (MQ=255)
                                   gATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAttt                                                      >  2:6567234/1‑93 (MQ=255)
                                    aTCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAtttt                                                     >  1:6402163/1‑92 (MQ=255)
                                      ccTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATttctt                                                   >  1:5984747/1‑93 (MQ=255)
                                       cTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATttcttc                                                  <  2:3800623/93‑1 (MQ=255)
                                       cTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATttcttc                                                  <  2:3756808/93‑1 (MQ=255)
                                       cTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATttcttc                                                  >  1:1088889/1‑93 (MQ=255)
                                       cTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATttcttc                                                  <  1:1358854/93‑1 (MQ=255)
                                            cAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAat                                             >  2:218587/1‑93 (MQ=255)
                                            cAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAat                                             >  2:6229544/1‑93 (MQ=255)
                                             aaaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatg                                            >  1:2169823/1‑93 (MQ=255)
                                             aaaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatg                                            >  2:1038838/1‑93 (MQ=255)
                                             aaaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatg                                            >  2:6354742/1‑93 (MQ=255)
                                              aaaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatga                                           <  2:2343096/93‑1 (MQ=255)
                                               aaTCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAatgat                                          >  1:6583556/1‑93 (MQ=255)
                                                 tCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAAtgatga                                        >  1:7893692/1‑93 (MQ=255)
                                                   aTTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGaaa                                      <  1:6967984/93‑1 (MQ=255)
                                                    ttCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAc                                     <  1:4870706/93‑1 (MQ=255)
                                                     tCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACg                                    >  1:4546042/1‑93 (MQ=255)
                                                      cACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGc                                   <  2:6733496/93‑1 (MQ=255)
                                                        cccGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTc                                 <  1:2234763/93‑1 (MQ=255)
                                                         ccGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCa                                >  2:3415037/1‑93 (MQ=255)
                                                         ccGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCa                                <  2:2743808/93‑1 (MQ=255)
                                                           gATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATa                              <  1:6327392/93‑1 (MQ=255)
                                                            aTGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATaa                             >  1:1732056/1‑93 (MQ=255)
                                                            aTGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATaa                             <  1:1000986/93‑1 (MQ=255)
                                                              gggCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAt                           <  1:7217794/93‑1 (MQ=255)
                                                               ggCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAtt                          >  2:5980988/1‑93 (MQ=255)
                                                               ggCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAtt                          >  2:7788843/1‑93 (MQ=255)
                                                               ggCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAtt                          <  1:950932/93‑1 (MQ=255)
                                                                gCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAttt                         >  2:3168707/1‑93 (MQ=255)
                                                                gCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAttt                         >  1:5775390/1‑93 (MQ=255)
                                                                gCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAttt                         <  2:5290341/93‑1 (MQ=255)
                                                                gCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAttt                         <  2:4167551/93‑1 (MQ=255)
                                                                  gAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGt                       <  1:1559047/93‑1 (MQ=255)
                                                                   aaaTCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTc                      <  1:3921925/93‑1 (MQ=255)
                                                                   aaaTCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTc                      <  2:3339659/93‑1 (MQ=255)
                                                                     aTCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCtt                    >  1:1484532/1‑93 (MQ=255)
                                                                     aTCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCtt                    >  1:4685735/1‑93 (MQ=255)
                                                                      tCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTa                   >  2:1807924/1‑93 (MQ=255)
                                                                      tCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTa                   >  1:2658971/1‑93 (MQ=255)
                                                                      tCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTa                   >  2:6614980/1‑93 (MQ=255)
                                                                      tCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTa                   >  2:4976354/1‑93 (MQ=255)
                                                                       cGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTAt                  <  1:7653737/93‑1 (MQ=255)
                                                                        gATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATg                 >  1:6772187/1‑93 (MQ=255)
                                                                         aTGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGc                <  1:5264072/93‑1 (MQ=255)
                                                                         aTGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGc                <  1:1895106/93‑1 (MQ=255)
                                                                         aTGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGc                <  2:6941096/93‑1 (MQ=255)
                                                                         aTGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGc                <  2:4548014/93‑1 (MQ=255)
                                                                           gCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCa              <  2:3613438/93‑1 (MQ=255)
                                                                            cAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaa             <  1:2081833/93‑1 (MQ=255)
                                                                              aTGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaaa           >  2:5383131/1‑93 (MQ=255)
                                                                              aTGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaaa           >  2:5938170/1‑93 (MQ=255)
                                                                              aTGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaaa           >  2:7692086/1‑93 (MQ=255)
                                                                               tGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaaaa          >  1:5522992/1‑93 (MQ=255)
                                                                               tGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCaaaaa          >  1:3539635/1‑93 (MQ=255)
                                                                                ggAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAAc         >  2:1146817/1‑93 (MQ=255)
                                                                                   aTTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGcc      >  1:4136141/1‑93 (MQ=255)
                                                                                    tgccTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCa     <  1:7828446/91‑1 (MQ=255)
                                                                                     tCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAc    >  1:7740661/1‑93 (MQ=255)
                                                                                      ccTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAACCGCCACg   >  1:6117538/1‑93 (MQ=255)
                                                                                      ccTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACg   <  2:1281191/93‑1 (MQ=255)
                                                                                       cTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACgt  <  2:2455860/93‑1 (MQ=255)
                                                                                       cTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACgt  >  1:7285035/1‑93 (MQ=255)
                                                                                       cTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACgt  >  1:2980629/1‑93 (MQ=255)
                                                                                       cTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACgt  <  2:4776690/93‑1 (MQ=255)
                                                                                       cTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACgt  >  2:1674415/1‑93 (MQ=255)
                                                                                          |                                                                                         
CTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGT  >  NC_000913/3965139‑3965318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 221 total aligned reads displayed.
GAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT  >  NC_000913/3965136‑3965322
                                                                                             |                                                                                             
GAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCG                                                                                               <  SRR4302543.2295694/94‑1 (MQ=60)
GAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCG                                                                                               <  SRR4302543.5518401/94‑1 (MQ=60)
  GCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTT                                                                                             <  SRR4302543.1744870/94‑1 (MQ=60)
   CTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTA                                                                                            >  SRR4302543.4219479/1‑94 (MQ=60)
    TGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAA                                                                                           <  SRR4302543.426273/94‑1 (MQ=60)
     GCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAAT                                                                                          >  SRR4302543.932565/1‑94 (MQ=60)
     GCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAAT                                                                                          >  SRR4302543.7695367/1‑94 (MQ=60)
     GCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAAT                                                                                          >  SRR4302543.7234897/1‑94 (MQ=60)
      CTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATA                                                                                         <  SRR4302543.6556043/94‑1 (MQ=60)
       TCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAA                                                                                        <  SRR4302543.3446589/94‑1 (MQ=60)
        CACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAA                                                                                       <  SRR4302543.4757788/94‑1 (MQ=60)
         ACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAAC                                                                                      >  SRR4302543.4205292/1‑94 (MQ=60)
            ACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGG                                                                                   <  SRR4302543.444066/94‑1 (MQ=60)
             CTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGC                                                                                  >  SRR4302543.2127444/1‑94 (MQ=60)
             CTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGC                                                                                  >  SRR4302543.1778507/1‑94 (MQ=60)
             CTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGC                                                                                  >  SRR4302543.6714812/1‑94 (MQ=60)
              TCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCA                                                                                 <  SRR4302543.6127400/94‑1 (MQ=60)
               CAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAA                                                                                >  SRR4302543.6514205/1‑94 (MQ=60)
               CAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAA                                                                                >  SRR4302543.3823740/1‑94 (MQ=60)
                AGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAT                                                                               >  SRR4302543.2214164/1‑94 (MQ=60)
                AGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAT                                                                               >  SRR4302543.5825868/1‑94 (MQ=60)
                AGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAT                                                                               >  SRR4302543.7508523/1‑94 (MQ=60)
                AGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAT                                                                               <  SRR4302543.2124376/94‑1 (MQ=60)
                AGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAAT                                                                               <  SRR4302543.5252239/94‑1 (MQ=60)
                 GGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATG                                                                              >  SRR4302543.896520/1‑94 (MQ=60)
                 GGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATG                                                                              <  SRR4302543.5924295/94‑1 (MQ=60)
                 GGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATG                                                                              <  SRR4302543.5080847/94‑1 (MQ=60)
                 GGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATG                                                                              >  SRR4302543.180720/1‑94 (MQ=60)
                  GAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGA                                                                             >  SRR4302543.1076116/1‑94 (MQ=60)
                  GAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGA                                                                             >  SRR4302543.3553386/1‑94 (MQ=60)
                   AAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGAC                                                                            >  SRR4302543.5500512/1‑94 (MQ=60)
                   AAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGAC                                                                            <  SRR4302543.4286079/94‑1 (MQ=60)
                   AAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGAC                                                                            <  SRR4302543.4887088/94‑1 (MQ=60)
                    AGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACC                                                                           >  SRR4302543.3866472/1‑94 (MQ=60)
                    AGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACC                                                                           >  SRR4302543.4410619/1‑94 (MQ=60)
                    AGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACC                                                                           >  SRR4302543.7362135/1‑94 (MQ=60)
                    AGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACC                                                                           <  SRR4302543.4712675/94‑1 (MQ=60)
                    AGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAAGCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACC                                                                           <  SRR4302543.4712676/94‑1 (MQ=60)
                     GAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCA                                                                          <  SRR4302543.2786520/94‑1 (MQ=60)
                      AACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGCATTCCTCGTTAATAAACTGGCAATGACCAA                                                                         >  SRR4302543.5912640/1‑94 (MQ=60)
                       ACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAG                                                                        >  SRR4302543.5969280/1‑94 (MQ=60)
                       ACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAG                                                                        <  SRR4302543.5871938/94‑1 (MQ=60)
                         TGCAGAAAATGTGGATCCTGCGCAAAATCATTCACGCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGAC                                                                      <  SRR4302543.3150007/94‑1 (MQ=60)
                         TGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGAC                                                                      <  SRR4302543.7837153/94‑1 (MQ=60)
                         TGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGAC                                                                      <  SRR4302543.2516380/94‑1 (MQ=60)
                           CAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCA                                                                    >  SRR4302543.3243271/1‑94 (MQ=60)
                           CAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCA                                                                    <  SRR4302543.4589482/94‑1 (MQ=60)
                           CAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCA                                                                    >  SRR4302543.1762157/1‑94 (MQ=60)
                            AGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAA                                                                   >  SRR4302543.7650794/1‑94 (MQ=60)
                            AGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAA                                                                   >  SRR4302543.218479/1‑94 (MQ=60)
                            AGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAA                                                                   <  SRR4302543.7732909/94‑1 (MQ=60)
                             GAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAAG                                                                  >  SRR4302543.1564775/1‑94 (MQ=60)
                              AAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATG                                                                 >  SRR4302543.2604878/1‑94 (MQ=60)
                              AAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATG                                                                 >  SRR4302543.2092380/1‑94 (MQ=60)
                              AAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATG                                                                 <  SRR4302543.1390620/94‑1 (MQ=60)
                                AATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAC                                                               <  SRR4302543.3702673/94‑1 (MQ=60)
                                AATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAC                                                               <  SRR4302543.3702674/94‑1 (MQ=60)
                                AATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAC                                                               >  SRR4302543.4931176/1‑94 (MQ=60)
                                AATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAC                                                               <  SRR4302543.7245941/94‑1 (MQ=60)
                                AATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAC                                                               <  SRR4302543.6010194/94‑1 (MQ=60)
                                AATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGAC                                                               <  SRR4302543.198766/94‑1 (MQ=60)
                                 ATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACG                                                              >  SRR4302543.1505027/1‑94 (MQ=60)
                                   GTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGAT                                                            <  SRR4302543.690010/94‑1 (MQ=60)
                                    TGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATT                                                           <  SRR4302543.1910467/94‑1 (MQ=60)
                                      GATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTT                                                         >  SRR4302543.6462436/1‑94 (MQ=60)
                                      GATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTC                                                         >  SRR4302543.7904906/1‑94 (MQ=60)
                                      GATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTC                                                         <  SRR4302543.4856037/94‑1 (MQ=60)
                                      GATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTC                                                         >  SRR4302543.3959115/1‑94 (MQ=60)
                                       ATCCTGCGCAAAATCACTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCT                                                        >  SRR4302543.3286385/1‑94 (MQ=60)
                                        TCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTT                                                       >  SRR4302543.6039584/1‑94 (MQ=60)
                                        TCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTT                                                       >  SRR4302543.6499843/1‑94 (MQ=60)
                                         CCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTC                                                      <  SRR4302543.349761/94‑1 (MQ=60)
                                         CCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTC                                                      >  SRR4302543.1098675/1‑94 (MQ=60)
                                         CCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTC                                                      <  SRR4302543.7720417/94‑1 (MQ=60)
                                          CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGGATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCG                                                     <  SRR4302543.2540632/94‑1 (MQ=60)
                                          CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCG                                                     <  SRR4302543.1021900/94‑1 (MQ=60)
                                          CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCG                                                     >  SRR4302543.1803911/1‑94 (MQ=60)
                                          CTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCG                                                     <  SRR4302543.1371020/94‑1 (MQ=60)
                                             CGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAA                                                  >  SRR4302543.7895666/1‑94 (MQ=60)
                                              GCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAAT                                                 <  SRR4302543.7029867/94‑1 (MQ=60)
                                              GCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAAT                                                 <  SRR4302543.486567/94‑1 (MQ=60)
                                               CAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATG                                                <  SRR4302543.220613/94‑1 (MQ=60)
                                               CAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATG                                                >  SRR4302543.2189262/1‑94 (MQ=60)
                                               CAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATGCCTCGTTAATAAACTGGCAATGGCCAAGACCAATGACGATTTCTTCGAAATG                                                <  SRR4302543.6779891/94‑1 (MQ=60)
                                                AAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGA                                               >  SRR4302543.4782033/1‑94 (MQ=60)
                                                AAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGA                                               >  SRR4302543.120885/1‑94 (MQ=60)
                                                 AAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGAT                                              <  SRR4302543.6414062/94‑1 (MQ=60)
                                                 AAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGAT                                              >  SRR4302543.3247961/1‑94 (MQ=60)
                                                  AATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATG                                             <  SRR4302543.4194790/94‑1 (MQ=60)
                                                   ATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGA                                            >  SRR4302543.7967924/1‑94 (MQ=60)
                                                   ATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGA                                            <  SRR4302543.6909809/94‑1 (MQ=60)
                                                    TCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAA                                           <  SRR4302543.29131/94‑1 (MQ=60)
                                                    TCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAA                                           <  SRR4302543.7910835/94‑1 (MQ=60)
                                                     CATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAA                                          >  SRR4302543.5349938/1‑94 (MQ=60)
                                                     CATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAA                                          >  SRR4302543.7533192/1‑94 (MQ=60)
                                                      ATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAC                                         <  SRR4302543.1722434/94‑1 (MQ=60)
                                                      ATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAC                                         <  SRR4302543.7033555/94‑1 (MQ=60)
                                                      ATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAAC                                         <  SRR4302543.7753348/94‑1 (MQ=60)
                                                       TTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACG                                        >  SRR4302543.4587441/1‑94 (MQ=60)
                                                       TTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACG                                        <  SRR4302543.4915108/94‑1 (MQ=60)
                                                       TTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACG                                        <  SRR4302543.6586197/94‑1 (MQ=60)
                                                         CACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCT                                      <  SRR4302543.3943660/94‑1 (MQ=60)
                                                          ACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTC                                     >  SRR4302543.3041255/1‑94 (MQ=60)
                                                          ACCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTC                                     >  SRR4302543.5986372/1‑94 (MQ=60)
                                                           CCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCA                                    >  SRR4302543.6449498/1‑94 (MQ=60)
                                                           CCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCA                                    <  SRR4302543.6864957/94‑1 (MQ=60)
                                                           CCCGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCA                                    <  SRR4302543.2254979/94‑1 (MQ=60)
                                                             CGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATA                                  >  SRR4302543.598668/1‑94 (MQ=60)
                                                             CGATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATA                                  >  SRR4302543.7484257/1‑94 (MQ=60)
                                                              GATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAA                                 <  SRR4302543.6386899/94‑1 (MQ=60)
                                                              GATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAA                                 >  SRR4302543.1747496/1‑94 (MQ=60)
                                                              GATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAA                                 <  SRR4302543.3468321/94‑1 (MQ=60)
                                                               ATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAA                                >  SRR4302543.5164523/1‑94 (MQ=60)
                                                               ATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAA                                <  SRR4302543.1009831/94‑1 (MQ=60)
                                                               ATGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAA                                >  SRR4302543.1078681/1‑94 (MQ=60)
                                                                TGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAT                               <  SRR4302543.445582/94‑1 (MQ=60)
                                                                TGGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAAT                               >  SRR4302543.1603098/1‑94 (MQ=60)
                                                                 GGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATT                              >  SRR4302543.4189126/1‑94 (MQ=60)
                                                                 GGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATT                              >  SRR4302543.5328295/1‑94 (MQ=60)
                                                                 GGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATT                              <  SRR4302543.7287754/94‑1 (MQ=60)
                                                                 GGGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATT                              <  SRR4302543.7287755/94‑1 (MQ=60)
                                                                  GGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTT                             <  SRR4302543.959241/94‑1 (MQ=60)
                                                                  GGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTT                             >  SRR4302543.5827963/1‑94 (MQ=60)
                                                                  GGCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTT                             <  SRR4302543.4399232/94‑1 (MQ=60)
                                                                   GCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTG                            <  SRR4302543.4896465/94‑1 (MQ=60)
                                                                   GCGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTG                            <  SRR4302543.391747/94‑1 (MQ=60)
                                                                    CGAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGT                           >  SRR4302543.3105158/1‑94 (MQ=60)
                                                                     GAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTC                          <  SRR4302543.1572976/94‑1 (MQ=60)
                                                                     GAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTC                          <  SRR4302543.1118882/94‑1 (MQ=60)
                                                                     GAAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTC                          >  SRR4302543.861457/1‑94 (MQ=60)
                                                                      AAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCT                         >  SRR4302543.6604518/1‑94 (MQ=60)
                                                                      AAATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCT                         <  SRR4302543.3956536/94‑1 (MQ=60)
                                                                       AATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTT                        >  SRR4302543.1497902/1‑94 (MQ=60)
                                                                       AATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTT                        >  SRR4302543.6210325/1‑94 (MQ=60)
                                                                       AATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTT                        >  SRR4302543.628788/1‑94 (MQ=60)
                                                                       AATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTT                        >  SRR4302543.4728487/1‑94 (MQ=60)
                                                                       AATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTT                        <  SRR4302543.5692535/94‑1 (MQ=60)
                                                                        ATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTA                       >  SRR4302543.7548387/1‑94 (MQ=60)
                                                                        ATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTA                       >  SRR4302543.7869565/1‑94 (MQ=60)
                                                                        ATCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTA                       >  SRR4302543.2683078/1‑94 (MQ=60)
                                                                         TCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTAT                      >  SRR4302543.2539692/1‑94 (MQ=60)
                                                                         TCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTAT                      <  SRR4302543.1552094/94‑1 (MQ=60)
                                                                         TCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTAT                      <  SRR4302543.3933910/94‑1 (MQ=60)
                                                                         TCGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTAT                      <  SRR4302543.2312321/94‑1 (MQ=60)
                                                                          CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG                     >  SRR4302543.1771116/1‑94 (MQ=60)
                                                                          CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG                     >  SRR4302543.6836160/1‑94 (MQ=60)
                                                                          CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG                     <  SRR4302543.1627499/94‑1 (MQ=60)
                                                                          CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG                     <  SRR4302543.7737404/94‑1 (MQ=60)
                                                                          CGATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATG                     <  SRR4302543.7726301/94‑1 (MQ=60)
                                                                           GATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGC                    >  SRR4302543.4955802/1‑94 (MQ=60)
                                                                           GATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGC                    <  SRR4302543.3645309/94‑1 (MQ=60)
                                                                            ATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCC                   <  SRR4302543.5311565/94‑1 (MQ=60)
                                                                            ATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCC                   >  SRR4302543.271444/1‑94 (MQ=60)
                                                                            ATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCC                   >  SRR4302543.3673053/1‑94 (MQ=60)
                                                                            ATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCC                   >  SRR4302543.6125776/1‑94 (MQ=60)
                                                                            ATGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCC                   <  SRR4302543.1912150/94‑1 (MQ=60)
                                                                            ATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCC                   >  SRR4302543.3528193/1‑94 (MQ=60)
                                                                             TGCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCA                  <  SRR4302543.2424637/94‑1 (MQ=60)
                                                                              GCAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAA                 >  SRR4302543.7281944/1‑94 (MQ=60)
                                                                               CAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAA                <  SRR4302543.2100426/94‑1 (MQ=60)
                                                                               CAATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAA                >  SRR4302543.1152141/1‑94 (MQ=60)
                                                                                CATGGAATTCCTCGTGAATAAACTTGCCATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAA               <  SRR4302543.381923/94‑1 (MQ=60)
                                                                                AATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAA               >  SRR4302543.5054296/1‑94 (MQ=60)
                                                                                 ATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTGTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAA              >  SRR4302543.2647260/1‑94 (MQ=60)
                                                                                 ATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAA              >  SRR4302543.7316740/1‑94 (MQ=60)
                                                                                 ATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAA              <  SRR4302543.7324966/94‑1 (MQ=60)
                                                                                 ATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAA              >  SRR4302543.3571099/1‑94 (MQ=60)
                                                                                 ATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAA              >  SRR4302543.7469433/1‑94 (MQ=60)
                                                                                 ATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAA              >  SRR4302543.910350/1‑94 (MQ=60)
                                                                                 ATGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAA              >  SRR4302543.5573163/1‑94 (MQ=60)
                                                                                  TGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAAC             <  SRR4302543.6492022/94‑1 (MQ=60)
                                                                                  TGGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAAC             <  SRR4302543.2629713/94‑1 (MQ=60)
                                                                                   GGAATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACG            <  SRR4302543.2378052/94‑1 (MQ=60)
                                                                                     AATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCC          <  SRR4302543.2014525/94‑1 (MQ=60)
                                                                                     AATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCC          <  SRR4302543.6373790/94‑1 (MQ=60)
                                                                                     AATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCC          >  SRR4302543.4173467/1‑94 (MQ=60)
                                                                                      ATTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGGCA         >  SRR4302543.6650776/1‑94 (MQ=60)
                                                                                       TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAACAACGCCAC        >  SRR4302543.6900603/1‑94 (MQ=60)
                                                                                       TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC        >  SRR4302543.6900604/1‑94 (MQ=60)
                                                                                       TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC        >  SRR4302543.7813786/1‑94 (MQ=60)
                                                                                       TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC        <  SRR4302543.7574866/94‑1 (MQ=60)
                                                                                       TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC        <  SRR4302543.7902170/94‑1 (MQ=60)
                                                                                       TTCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCAC        <  SRR4302543.2540149/94‑1 (MQ=60)
                                                                                        TCCTCGTTAATAAACTTGCAATTACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTattattgcaaaaaggccact       >  SRR4302543.6175484/1‑74 (MQ=60)
                                                                                        TCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAACCGCCACG       >  SRR4302543.6175485/1‑94 (MQ=60)
                                                                                        TCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACG       >  SRR4302543.4081626/1‑94 (MQ=60)
                                                                                        TCCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACG       >  SRR4302543.647485/1‑94 (MQ=60)
                                                                                         CCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGT      >  SRR4302543.3007697/1‑94 (MQ=60)
                                                                                         CCTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGT      >  SRR4302543.7355376/1‑94 (MQ=60)
                                                                                          CTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTG     >  SRR4302543.3368856/1‑94 (MQ=60)
                                                                                          CTCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTG     >  SRR4302543.269546/1‑94 (MQ=60)
                                                                                           TCGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGT    <  SRR4302543.538516/94‑1 (MQ=60)
                                                                                            CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTT   >  SRR4302543.7071566/1‑94 (MQ=60)
                                                                                            CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTT   <  SRR4302543.2181735/94‑1 (MQ=60)
                                                                                            CGTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTT   <  SRR4302543.2161205/94‑1 (MQ=60)
                                                                                             GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAATGCTCATAATTTTGTCTTATCCCAAATACGCCACGTGTTT  >  SRR4302543.4486419/1‑94 (MQ=60)
                                                                                             GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT  >  SRR4302543.4524542/1‑94 (MQ=60)
                                                                                             GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT  <  SRR4302543.3590705/94‑1 (MQ=60)
                                                                                             GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT  >  SRR4302543.6600247/1‑94 (MQ=60)
                                                                                             GTTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT  >  SRR4302543.3806383/1‑94 (MQ=60)
                                                                                             |                                                                                             
GAGCTGCTCACGACTCAGGAAGAACTGCAGAAAATGTGGATCCTGCGCAAAATCATTCACCCGATGGGCGAAATCGATGCAATGGAATTCCTCATTAATAAACTGGCAATGACCAAGACCAATGACGATTTCTTCGAAATGATGAAACGCTCATAAATTTGTCTTATGCCAAAAACGCCACGTGTTT  >  NC_000913/3965136‑3965322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑