Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,001,486 2 bp→GC coding (316‑317/903 nt) rarD ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,001,4860CG100.0% 1059.0 / NA 337R106A (CGG→GCG) rarDhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (162/175);  total (162/175)
*NC_0009134,001,4870GC100.0% 1065.6 / NA 337R106A (CGG→GCG) rarDhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (162/175);  total (162/175)

Only 100 of 348 total aligned reads displayed.

AGCCATTGCATCCGGCGGAATCCGTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCCGTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAA  >  NC_000913/4001399‑4001573
                                                                                       ||                                                                                      
agccaTTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTcc                                                                                    >  1:667110/1‑93 (MQ=255)
agccaTTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTcc                                                                                    >  2:4826994/1‑93 (MQ=255)
 gccaTTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCa                                                                                   >  1:5592733/1‑93 (MQ=255)
  ccaTTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAg                                                                                  <  1:988027/93‑1 (MQ=255)
    aTTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCa                                                                                >  2:2232555/1‑93 (MQ=255)
     ttGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCat                                                                               >  2:6716951/1‑93 (MQ=255)
     ttGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCat                                                                               >  2:6883392/1‑93 (MQ=255)
     ttGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCat                                                                               >  1:4354423/1‑93 (MQ=255)
      tGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCata                                                                              <  1:625113/93‑1 (MQ=255)
      tGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCata                                                                              <  2:3929853/93‑1 (MQ=255)
      tGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCata                                                                              <  1:3365143/93‑1 (MQ=255)
       gCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCatat                                                                             >  1:4557894/1‑93 (MQ=255)
       gCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCatat                                                                             >  2:1624205/1‑93 (MQ=255)
        cATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATg                                                                            <  2:5979766/93‑1 (MQ=255)
         aTCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATgg                                                                           <  2:4272458/93‑1 (MQ=255)
          tCCGGCGGAATCGCTCGCCGTGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATCTGGt                                                                          >  1:4926721/1‑93 (MQ=255)
          tCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGt                                                                          >  1:1975941/1‑93 (MQ=255)
            cggcggAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGa                                                                        <  1:2096130/93‑1 (MQ=255)
            cggcggAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGa                                                                        <  1:2801845/93‑1 (MQ=255)
             ggcggAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAt                                                                       <  2:3489145/93‑1 (MQ=255)
              gcggAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAtt                                                                      <  2:7780044/93‑1 (MQ=255)
              gcggAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAtt                                                                      <  2:6152163/93‑1 (MQ=255)
              gcggAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAtt                                                                      >  2:2559084/1‑93 (MQ=255)
                 gAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGGGGGTTAATAAAGTAACGAAGGCTCGCTTCCAGCATATCGTGGTtttt                                                                   >  2:5707257/1‑93 (MQ=255)
                     cgctCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCAcc                                                               <  1:4655726/90‑1 (MQ=255)
                       ctCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGc                                                             >  1:2657571/2‑93 (MQ=255)
                       ctCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGc                                                             >  2:3679748/2‑93 (MQ=255)
                        tCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGcc                                                            >  1:2748343/1‑93 (MQ=255)
                          gCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCa                                                          <  2:1814435/93‑1 (MQ=255)
                          gCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCa                                                          >  2:2139496/1‑93 (MQ=255)
                          gCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCa                                                          >  1:6426282/1‑93 (MQ=255)
                           ccGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAg                                                         >  2:3093701/1‑93 (MQ=255)
                           ccGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAg                                                         >  2:246231/1‑93 (MQ=255)
                            cGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGa                                                        >  2:5619749/1‑93 (MQ=255)
                             gAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGAt                                                       >  2:6958409/1‑93 (MQ=255)
                              aGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATa                                                      >  2:5532448/1‑93 (MQ=255)
                                gAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATaaa                                                    >  1:835659/1‑93 (MQ=255)
                                gAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATaaa                                                    <  2:5121676/93‑1 (MQ=255)
                                 aaaaTCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAAc                                                   <  1:420294/93‑1 (MQ=255)
                                 aaaaTCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAAc                                                   <  1:7114450/93‑1 (MQ=255)
                                  aaaTCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACa                                                  <  1:4081541/93‑1 (MQ=255)
                                  aaaTCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACa                                                  <  1:2415409/93‑1 (MQ=255)
                                   aaTCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAg                                                 >  2:4249767/1‑93 (MQ=255)
                                     tcatcCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTa                                               >  2:2009727/1‑93 (MQ=255)
                                     tcatcCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTa                                               <  1:588311/93‑1 (MQ=255)
                                     tcatcCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTa                                               <  2:3990646/93‑1 (MQ=255)
                                     tcatcCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTa                                               <  2:460002/93‑1 (MQ=255)
                                       atcCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGc                                             >  2:1418106/1‑93 (MQ=255)
                                       acacccAGCACAATGTTCCCCAGCAGGTTAATAAAGTAACCAAGGCTCGCGTCCAGCATATGGTGAGTGTTCACCGCCCAGATAAACAGTAGc                                             <  1:5579203/90‑1 (MQ=255)
                                        tcCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGcc                                            >  1:5097198/1‑93 (MQ=255)
                                        tcCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGcc                                            >  2:1242471/1‑93 (MQ=255)
                                        tcCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGcc                                            >  1:737284/1‑93 (MQ=255)
                                         ccccAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCa                                           <  1:235603/93‑1 (MQ=255)
                                         ccccAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCa                                           >  1:5681285/1‑93 (MQ=255)
                                         ccccAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCa                                           <  2:2780966/93‑1 (MQ=255)
                                            cAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACCATAACCAGtg                                        >  2:5841644/1‑92 (MQ=255)
                                            cAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGtt                                        >  1:7242404/1‑93 (MQ=255)
                                            cAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGtt                                        <  2:1556652/93‑1 (MQ=255)
                                             aGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTg                                       >  2:7318107/1‑93 (MQ=255)
                                             aGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTg                                       >  2:5252292/1‑93 (MQ=255)
                                                  aaTGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGccacc                                  >  1:4820394/1‑93 (MQ=255)
                                                  aaTGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGccacc                                  <  1:3043227/93‑1 (MQ=255)
                                                   aTGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGGCAGTTGccacca                                 >  2:1343146/1‑93 (MQ=255)
                                                   aTGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGccacca                                 >  1:5465119/1‑93 (MQ=255)
                                                    tGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCaa                                <  1:1483078/93‑1 (MQ=255)
                                                    agTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCaa                                <  1:1677350/92‑1 (MQ=255)
                                                     gTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAAt                               >  2:6373964/1‑93 (MQ=255)
                                                         aCCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGc                           <  1:2545356/93‑1 (MQ=255)
                                                          ccAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCa                          >  2:2982438/1‑93 (MQ=255)
                                                          ccAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCa                          <  1:5345957/93‑1 (MQ=255)
                                                          ccAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCa                          <  1:3707336/93‑1 (MQ=255)
                                                          ccAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCa                          <  2:4703051/93‑1 (MQ=255)
                                                           cAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCAc                         <  1:1333100/93‑1 (MQ=255)
                                                           cAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCAc                         <  2:4652743/93‑1 (MQ=255)
                                                             gCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACgg                       >  1:3978380/1‑93 (MQ=255)
                                                             gCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACgg                       >  1:2895990/1‑93 (MQ=255)
                                                               gggTTGATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCa                     <  1:239663/93‑1 (MQ=255)
                                                               gggTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCa                     <  2:1134229/93‑1 (MQ=255)
                                                               gggTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCa                     >  1:772416/1‑93 (MQ=255)
                                                                ggTTAATAAAGTAACCAAGGCTCGCTTCCAGCAGATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCag                    <  1:7621699/93‑1 (MQ=255)
                                                                 gTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCaga                   <  1:1138698/93‑1 (MQ=255)
                                                                 gTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCaga                   >  1:443914/1‑93 (MQ=255)
                                                                 gTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCaga                   <  1:5622151/93‑1 (MQ=255)
                                                                 gTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCaga                   <  2:3738266/93‑1 (MQ=255)
                                                                  ttAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCagag                  >  2:2814106/1‑93 (MQ=255)
                                                                  ttAACAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCagag                  <  1:6016779/93‑1 (MQ=255)
                                                                    aataaAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAc                <  2:6571104/93‑1 (MQ=255)
                                                                    aataaAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAc                <  2:5073831/93‑1 (MQ=255)
                                                                    aataaAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAc                >  2:7205068/1‑93 (MQ=255)
                                                                    aataaAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAc                >  1:1174570/1‑93 (MQ=255)
                                                                      taaAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCCCCGCCCAGATCAACAGTAGCCAGTTGCAACCAATCAGCACGGCAGACACTg              >  1:6890679/1‑93 (MQ=255)
                                                                      taaAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTg              >  2:3390553/1‑93 (MQ=255)
                                                                      taaAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTg              >  2:752421/1‑93 (MQ=255)
                                                                         aGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCa           <  1:3210774/93‑1 (MQ=255)
                                                                           tAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGc         >  1:7857636/1‑93 (MQ=255)
                                                                            aaCCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCa        >  2:7099529/1‑93 (MQ=255)
                                                                                aaGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATaaa    >  2:493561/1‑93 (MQ=255)
                                                                                 aGGCTCGCTTCCAGCATATGGTGATTGGTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATaaaa   >  1:108819/1‑93 (MQ=255)
                                                                                  ggCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATaaaaa  <  2:1374679/93‑1 (MQ=255)
                                                                                  ggCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATaaaaa  <  2:714526/93‑1 (MQ=255)
                                                                                       ||                                                                                      
AGCCATTGCATCCGGCGGAATCCGTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCCGTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAA  >  NC_000913/4001399‑4001573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACCGCCAGCCATTGCATCCGGCGGAATCCGTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCCGTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATT  >  NC_000913/4001393‑4001575
                                                                                             |                                                                                         
ACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGGAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAACGTAACCAAGGCTCG                                                                                           >  SRR4302543.5318801/1‑94 (MQ=60)
ACCGCCAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCG                                                                                           >  SRR4302543.5318802/1‑94 (MQ=60)
     CAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCC                                                                                      >  SRR4302543.7002061/1‑94 (MQ=60)
     CAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCC                                                                                      >  SRR4302543.673248/1‑94 (MQ=60)
     CAGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCC                                                                                      >  SRR4302543.401596/1‑94 (MQ=60)
      AGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCA                                                                                     >  SRR4302543.5643676/1‑94 (MQ=60)
      AGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCA                                                                                     <  SRR4302543.4693761/94‑1 (MQ=60)
      AGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCA                                                                                     <  SRR4302543.461054/94‑1 (MQ=60)
      AGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCA                                                                                     <  SRR4302543.3597065/94‑1 (MQ=60)
      AGCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCA                                                                                     >  SRR4302543.2378445/1‑94 (MQ=60)
       GCCATTGCATCCGGCGGAATCGGTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAG                                                                                    <  SRR4302543.4495122/94‑1 (MQ=60)
       GCCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAG                                                                                    <  SRR4302543.4677737/94‑1 (MQ=60)
        CCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGC                                                                                   <  SRR4302543.996743/94‑1 (MQ=60)
        CCATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGC                                                                                   >  SRR4302543.2676214/1‑94 (MQ=60)
         CATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCA                                                                                  >  SRR4302543.5361632/1‑94 (MQ=60)
         CATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCA                                                                                  >  SRR4302543.2548003/1‑94 (MQ=60)
          ATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCCT                                                                                 >  SRR4302543.2861402/1‑94 (MQ=60)
          ATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCAT                                                                                 >  SRR4302543.4393884/1‑94 (MQ=60)
          ATTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCAT                                                                                 >  SRR4302543.447638/1‑94 (MQ=60)
           TTGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATA                                                                                <  SRR4302543.116174/94‑1 (MQ=60)
            TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATAT                                                                               <  SRR4302543.3395393/94‑1 (MQ=60)
            TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATAT                                                                               <  SRR4302543.988747/94‑1 (MQ=60)
            TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATAT                                                                               >  SRR4302543.4599391/1‑94 (MQ=60)
            TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATAT                                                                               <  SRR4302543.7197189/94‑1 (MQ=60)
            TGCATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATAT                                                                               <  SRR4302543.630834/94‑1 (MQ=60)
              CATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGG                                                                             <  SRR4302543.5616161/94‑1 (MQ=60)
              CATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGG                                                                             >  SRR4302543.5774865/1‑94 (MQ=60)
               ATCCGGCGGAATCGCTCGCCGTGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATCTGGT                                                                            >  SRR4302543.4971602/1‑94 (MQ=60)
               ATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGT                                                                            >  SRR4302543.1993659/1‑94 (MQ=60)
               ATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGT                                                                            <  SRR4302543.7593940/94‑1 (MQ=60)
               ATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGT                                                                            <  SRR4302543.7823213/94‑1 (MQ=60)
               ATCCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGG                                                                            >  SRR4302543.5672047/1‑94 (MQ=60)
                 CCGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGA                                                                          >  SRR4302543.68289/1‑94 (MQ=60)
                  CGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAT                                                                         >  SRR4302543.6566764/1‑94 (MQ=60)
                  CGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAT                                                                         >  SRR4302543.4958979/1‑94 (MQ=60)
                  CGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAT                                                                         <  SRR4302543.2114861/94‑1 (MQ=60)
                  CGGCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGAT                                                                         <  SRR4302543.2827467/94‑1 (MQ=60)
                    GCGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTG                                                                       <  SRR4302543.5717665/94‑1 (MQ=60)
                     CGGAATCGCTCGCCGAGGAAAATCATCCCCAGTACAATGTTCACCAGCGGGTTAATAACGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGT                                                                      <  SRR4302543.4212669/94‑1 (MQ=60)
                     CGGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGT                                                                      >  SRR4302543.4384272/1‑94 (MQ=60)
                      GGAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTT                                                                     >  SRR4302543.778447/1‑94 (MQ=60)
                       GAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTC                                                                    <  SRR4302543.4805182/94‑1 (MQ=60)
                       GAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTC                                                                    >  SRR4302543.3589461/1‑94 (MQ=60)
                       GAATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTC                                                                    <  SRR4302543.6452500/94‑1 (MQ=60)
                        AATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCA                                                                   >  SRR4302543.1878076/1‑94 (MQ=60)
                        AATCGCTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCA                                                                   <  SRR4302543.7323356/94‑1 (MQ=60)
                         atcgcTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCAC                                                                  >  SRR4302543.5903512/6‑94 (MQ=60)
                          tcgcTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACC                                                                 <  SRR4302543.3156951/90‑1 (MQ=60)
                          tcgcTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACC                                                                 <  SRR4302543.6174439/90‑1 (MQ=60)
                           cgcTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACac                                                                >  SRR4302543.732425/4‑92 (MQ=60)
                           cgcTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCG                                                                >  SRR4302543.2055654/4‑94 (MQ=60)
                           cgcTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCG                                                                <  SRR4302543.4698124/91‑1 (MQ=60)
                            gcTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGC                                                               >  SRR4302543.2681663/3‑94 (MQ=60)
                             CTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCC                                                              >  SRR4302543.2773333/1‑94 (MQ=60)
                              TCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCC                                                             <  SRR4302543.223898/94‑1 (MQ=60)
                              TCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCC                                                             <  SRR4302543.5687182/94‑1 (MQ=60)
                               CGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCA                                                            >  SRR4302543.6486837/1‑94 (MQ=60)
                               CGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCA                                                            <  SRR4302543.7952593/94‑1 (MQ=60)
                               CGCCGAGGAAAATCATACCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCA                                                            >  SRR4302543.7405176/1‑94 (MQ=60)
                                GCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAG                                                           >  SRR4302543.2437053/1‑94 (MQ=60)
                                GCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAG                                                           <  SRR4302543.126033/94‑1 (MQ=60)
                                 CCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGA                                                          <  SRR4302543.2657503/94‑1 (MQ=60)
                                   GAAGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATA                                                        <  SRR4302543.2817586/94‑1 (MQ=60)
                                    AGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAA                                                       <  SRR4302543.1647942/94‑1 (MQ=60)
                                    AGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAA                                                       <  SRR4302543.5654567/94‑1 (MQ=60)
                                    AGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAA                                                       <  SRR4302543.5654566/94‑1 (MQ=60)
                                     GGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAA                                                      >  SRR4302543.843036/1‑94 (MQ=60)
                                       AAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACA                                                    >  SRR4302543.4038020/1‑94 (MQ=60)
                                       AAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACA                                                    <  SRR4302543.7183564/94‑1 (MQ=60)
                                       AAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACA                                                    <  SRR4302543.7183565/94‑1 (MQ=60)
                                       AAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACA                                                    <  SRR4302543.424219/94‑1 (MQ=60)
                                       AAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACA                                                    >  SRR4302543.2987657/1‑94 (MQ=60)
                                        AAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAG                                                   <  SRR4302543.5225692/94‑1 (MQ=60)
                                        AAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAG                                                   <  SRR4302543.4118128/94‑1 (MQ=60)
                                        AAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAG                                                   <  SRR4302543.2437233/94‑1 (MQ=60)
                                          ATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTA                                                 <  SRR4302543.1784591/94‑1 (MQ=60)
                                           TCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAG                                                <  SRR4302543.593688/94‑1 (MQ=60)
                                             acaCCCAGCACAATGTTCCCCAGCAGGTTAATAAAGTAACCAAGGCTCGCGTCCAGCATATGGTGAGTGTTCACCGCCCAGATAAACAGTAGCC                                              <  SRR4302543.5629994/91‑1 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              >  SRR4302543.5143357/1‑94 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              >  SRR4302543.167380/1‑94 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              <  SRR4302543.1154036/94‑1 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              <  SRR4302543.3139429/94‑1 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              >  SRR4302543.2920789/1‑94 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              >  SRR4302543.7333822/1‑94 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              >  SRR4302543.743883/1‑94 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              <  SRR4302543.5630197/94‑1 (MQ=60)
                                             ATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              <  SRR4302543.5630196/94‑1 (MQ=60)
                                             ATCCCCAGCACAATGTTCACAAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCC                                              >  SRR4302543.7737647/1‑94 (MQ=60)
                                              TCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCA                                             >  SRR4302543.5733141/1‑94 (MQ=60)
                                               CCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAG                                            <  SRR4302543.6972628/94‑1 (MQ=60)
                                               CCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAG                                            <  SRR4302543.4553425/94‑1 (MQ=60)
                                               CCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAG                                            <  SRR4302543.237638/94‑1 (MQ=60)
                                                CCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGT                                           >  SRR4302543.4919071/1‑94 (MQ=60)
                                                 CCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTT                                          >  SRR4302543.7312492/1‑94 (MQ=60)
                                                 CCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTT                                          <  SRR4302543.2799120/94‑1 (MQ=60)
                                                   AGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGC                                        >  SRR4302543.1125064/1‑94 (MQ=60)
                                                     CACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCA                                      >  SRR4302543.468236/1‑94 (MQ=60)
                                                     CACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGCTGCCA                                      >  SRR4302543.7753621/1‑94 (MQ=60)
                                                      ACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCAC                                     >  SRR4302543.2762818/1‑94 (MQ=60)
                                                       CAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACC                                    >  SRR4302543.5093932/1‑94 (MQ=60)
                                                       CAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACC                                    >  SRR4302543.4864400/1‑94 (MQ=60)
                                                       CAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACC                                    >  SRR4302543.3153970/1‑94 (MQ=60)
                                                        AATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCA                                   >  SRR4302543.5514640/1‑94 (MQ=60)
                                                        AATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCA                                   <  SRR4302543.3070668/94‑1 (MQ=60)
                                                         ATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAA                                  >  SRR4302543.3826949/1‑94 (MQ=60)
                                                          TGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAAT                                 <  SRR4302543.1496434/94‑1 (MQ=60)
                                                          TGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAAT                                 <  SRR4302543.532064/94‑1 (MQ=60)
                                                          AGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAAT                                 <  SRR4302543.1692389/94‑1 (MQ=60)
                                                          AGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAAT                                 <  SRR4302543.1692388/94‑1 (MQ=60)
                                                           GTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATC                                <  SRR4302543.6399143/94‑1 (MQ=60)
                                                           GTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATC                                >  SRR4302543.2085113/1‑94 (MQ=60)
                                                           GTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATC                                <  SRR4302543.1481185/94‑1 (MQ=60)
                                                           GTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGATGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATC                                <  SRR4302543.4855583/94‑1 (MQ=60)
                                                             TCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAG                              <  SRR4302543.869355/94‑1 (MQ=60)
                                                             TCACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAG                              <  SRR4302543.2226897/94‑1 (MQ=60)
                                                              CACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGC                             <  SRR4302543.6552612/94‑1 (MQ=60)
                                                              CACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGC                             >  SRR4302543.7999151/1‑94 (MQ=60)
                                                               ACCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCA                            <  SRR4302543.2568573/94‑1 (MQ=60)
                                                                CCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCAG                           >  SRR4302543.2692618/1‑94 (MQ=60)
                                                                CCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCAC                           <  SRR4302543.3739923/94‑1 (MQ=60)
                                                                CCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCAC                           <  SRR4302543.3739924/94‑1 (MQ=60)
                                                                CCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCAC                           <  SRR4302543.5394328/94‑1 (MQ=60)
                                                                CCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCAC                           <  SRR4302543.2520550/94‑1 (MQ=60)
                                                                CCAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCAC                           >  SRR4302543.5526729/1‑94 (MQ=60)
                                                                 CAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACG                          <  SRR4302543.3824145/94‑1 (MQ=60)
                                                                 CAGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACG                          <  SRR4302543.1344983/94‑1 (MQ=60)
                                                                 CAGCGAGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACG                          <  SRR4302543.5614629/94‑1 (MQ=60)
                                                                  AGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGG                         >  SRR4302543.4013662/1‑94 (MQ=60)
                                                                  AGCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGG                         >  SRR4302543.2922317/1‑94 (MQ=60)
                                                                   GCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGC                        >  SRR4302543.1223221/1‑94 (MQ=60)
                                                                   GCGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGC                        >  SRR4302543.7978539/1‑94 (MQ=60)
                                                                    CGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCA                       >  SRR4302543.146970/1‑94 (MQ=60)
                                                                    CGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCA                       >  SRR4302543.2414271/1‑94 (MQ=60)
                                                                    CGGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCA                       >  SRR4302543.779191/1‑94 (MQ=60)
                                                                     GGGTTGATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAG                      <  SRR4302543.241737/94‑1 (MQ=60)
                                                                     GGGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAG                      <  SRR4302543.2111170/94‑1 (MQ=60)
                                                                      GGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGA                     <  SRR4302543.7047194/94‑1 (MQ=60)
                                                                      GGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGA                     >  SRR4302543.448069/1‑94 (MQ=60)
                                                                      GGTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGA                     >  SRR4302543.4535983/1‑94 (MQ=60)
                                                                      GGTTAATAAAGTAACCAAGGCTCGCTTCCAGCAGATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGA                     <  SRR4302543.7694031/94‑1 (MQ=60)
                                                                       GTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAG                    >  SRR4302543.2443224/1‑94 (MQ=60)
                                                                       GTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAG                    <  SRR4302543.1149067/94‑1 (MQ=60)
                                                                       GTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAG                    <  SRR4302543.5673385/94‑1 (MQ=60)
                                                                       GTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAG                    <  SRR4302543.4264343/94‑1 (MQ=60)
                                                                       GTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAG                    <  SRR4302543.7729163/94‑1 (MQ=60)
                                                                       GTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAG                    <  SRR4302543.1149066/94‑1 (MQ=60)
                                                                       GTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAG                    <  SRR4302543.1217132/94‑1 (MQ=60)
                                                                       GTTAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAG                    <  SRR4302543.2860591/94‑1 (MQ=60)
                                                                        TTAACAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGA                   <  SRR4302543.6072444/94‑1 (MQ=60)
                                                                         TAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAC                  >  SRR4302543.1185213/1‑94 (MQ=60)
                                                                         TAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAC                  <  SRR4302543.3369532/94‑1 (MQ=60)
                                                                         TAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAC                  <  SRR4302543.6018197/94‑1 (MQ=60)
                                                                         TAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTCCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAC                  <  SRR4302543.7854433/94‑1 (MQ=60)
                                                                         CAATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGAC                  <  SRR4302543.5964772/94‑1 (MQ=60)
                                                                          AATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGTTTGGTCACCGCCCAGATAAACAGAAGCCAGTTGCCACCAATCAGCACGGCAGAGACC                 >  SRR4302543.5492489/1‑94 (MQ=60)
                                                                          AATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACT                 <  SRR4302543.503308/94‑1 (MQ=60)
                                                                          AATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACT                 <  SRR4302543.4119365/94‑1 (MQ=60)
                                                                          AATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACT                 <  SRR4302543.7641331/94‑1 (MQ=60)
                                                                          AATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACT                 <  SRR4302543.2398034/94‑1 (MQ=60)
                                                                          AATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACT                 <  SRR4302543.5436785/94‑1 (MQ=60)
                                                                          AATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACT                 >  SRR4302543.6865868/1‑94 (MQ=60)
                                                                           ATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCCCCGCCCAGATCAACAGTAGCCAGTTGCAACCAATCAGCACGGCAGACACTG                >  SRR4302543.6955470/1‑94 (MQ=60)
                                                                           ATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTG                <  SRR4302543.6724068/94‑1 (MQ=60)
                                                                           ATAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTG                <  SRR4302543.2961136/94‑1 (MQ=60)
                                                                            TAAAGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGC               >  SRR4302543.4097866/1‑94 (MQ=60)
                                                                               AGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAG            >  SRR4302543.3432355/1‑94 (MQ=60)
                                                                               AGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAG            <  SRR4302543.3248723/94‑1 (MQ=60)
                                                                               AGTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAG            <  SRR4302543.3239763/94‑1 (MQ=60)
                                                                                GTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGC           >  SRR4302543.4869310/1‑94 (MQ=60)
                                                                                GTAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGC           >  SRR4302543.7931659/1‑94 (MQ=60)
                                                                                 TAACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCA          <  SRR4302543.5400723/94‑1 (MQ=60)
                                                                                   ACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGGGACTGCCAGCATA        >  SRR4302543.4470693/1‑94 (MQ=60)
                                                                                   ACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGCGACTGCCAGCATA        >  SRR4302543.2428551/1‑94 (MQ=60)
                                                                                   ACCAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATA        >  SRR4302543.2714779/1‑94 (MQ=60)
                                                                                     CAAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAA      <  SRR4302543.6172303/94‑1 (MQ=60)
                                                                                      AAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAA     >  SRR4302543.2076537/1‑94 (MQ=60)
                                                                                      AAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAA     <  SRR4302543.4392690/94‑1 (MQ=60)
                                                                                      AAGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAA     <  SRR4302543.5910968/94‑1 (MQ=60)
                                                                                      AAGGCTCGCTTCCAGCATATGGTGATTGGTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAA     >  SRR4302543.109811/1‑94 (MQ=60)
                                                                                       AGGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAA    >  SRR4302543.6929375/1‑94 (MQ=60)
                                                                                        GGCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAAT   <  SRR4302543.1649874/94‑1 (MQ=60)
                                                                                         GCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATT  <  SRR4302543.6795355/94‑1 (MQ=60)
                                                                                         GCTCGCTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATT  >  SRR4302543.5129783/1‑94 (MQ=60)
                                                                                             |                                                                                         
ACCGCCAGCCATTGCATCCGGCGGAATCCGTCGCCGAGGAAAATCATCCCCAGCACAATGTTCACCAGCGGGTTAATAAAGTAACCAAGGCTCCGTTCCAGCATATGGTGATTGTTCACCGCCCAGATAAACAGTAGCCAGTTGCCACCAATCAGCACGGCAGAGACTGCCAGCATAAAAATT  >  NC_000913/4001393‑4001575

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑