Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,203,421 |
A→G |
V30A (GTT→GCT) |
purD ← |
phosphoribosylglycinamide synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,203,421 | 0 | A | G | 99.6%
| 828.3
/ ‑5.0
| 261 | V30A (GTT→GCT) | purD | phosphoribosylglycinamide synthetase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (143/117); total (144/117) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.15e-01 |
Only 100 of 281 total aligned reads displayed.
CGAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAACAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATC > NC_000913/4203332‑4203510
|
cGAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGcagcaa < 2:7358960/93‑1 (MQ=255)
aaaTCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCaaaa > 1:1980007/1‑93 (MQ=255)
aaTCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCaaaaa > 1:81788/1‑93 (MQ=255)
aaTCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCaaaaa < 1:454687/93‑1 (MQ=255)
aaTCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCaaaaa < 1:2056157/93‑1 (MQ=255)
tCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACa > 1:3404681/1‑93 (MQ=255)
tCCAACAGCGCCGGGATATCGGTCACGCCAATACCAACGTTTTACAGCGCGGGGTCCAAGGCAGGGCCTGCATTACCCGGCGCCGCAAAAACa > 2:5985908/1‑93 (MQ=255)
ccAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAg > 1:508887/1‑93 (MQ=255)
cAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGt > 2:6549500/1‑93 (MQ=255)
cAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGt < 2:6040928/93‑1 (MQ=255)
aaCAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGtc > 2:3145918/1‑93 (MQ=255)
aCAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGtct > 2:106199/1‑93 (MQ=255)
aCAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGtct > 2:5137821/1‑93 (MQ=255)
aGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCa < 1:3722742/93‑1 (MQ=255)
aGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCa < 1:7363943/93‑1 (MQ=255)
aGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCa > 1:2197258/1‑93 (MQ=255)
aGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCa < 1:1717418/93‑1 (MQ=255)
gcgcCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCaa > 1:6948352/1‑93 (MQ=255)
ccGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCa < 1:6775841/93‑1 (MQ=255)
ccGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCa > 1:722854/1‑93 (MQ=255)
gggATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAgc > 2:4194499/1‑93 (MQ=255)
ggATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAgcg < 1:3300480/93‑1 (MQ=255)
gATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAgcgg < 2:721008/93‑1 (MQ=255)
atatCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAgcggc > 1:364151/1‑93 (MQ=255)
tatCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAgcggcg > 1:2351205/1‑93 (MQ=255)
tatCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAACAAAAACAGTCTCAACCAgcggcg > 1:6851039/1‑93 (MQ=255)
atCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGa < 2:263430/93‑1 (MQ=255)
atCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGa < 1:1417909/93‑1 (MQ=255)
atCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGa < 2:7576080/93‑1 (MQ=255)
tCGGTCACGCCAATAGCAACGTTTTTCAGCGCGTGTTGCAGTGCACTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGAc > 2:6368617/1‑93 (MQ=255)
tCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGAc < 1:5264327/93‑1 (MQ=255)
tCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGAc < 1:5709944/93‑1 (MQ=255)
aCGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGcc > 2:334863/1‑93 (MQ=255)
aCGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGcc < 1:417372/93‑1 (MQ=255)
cAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCtt > 2:1852134/1‑93 (MQ=255)
aTAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTc > 2:6478835/1‑93 (MQ=255)
tAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTcc > 1:2639958/1‑93 (MQ=255)
tAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTcc < 1:749289/93‑1 (MQ=255)
aGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCa < 2:3628188/93‑1 (MQ=255)
aGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCa < 1:1789847/93‑1 (MQ=255)
gCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAg > 2:1487878/1‑93 (MQ=255)
gCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAg > 1:7661765/1‑93 (MQ=255)
aaCGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGc > 1:4098560/1‑93 (MQ=255)
aaCGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGc > 2:4016464/1‑93 (MQ=255)
aaCGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGc < 2:2313630/93‑1 (MQ=255)
aaCGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGc > 2:4767911/1‑93 (MQ=255)
aCGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGcc > 1:5670802/1‑93 (MQ=255)
aCGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGcc < 1:5947504/93‑1 (MQ=255)
cGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCa < 1:3965960/93‑1 (MQ=255)
cGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCa < 2:810854/93‑1 (MQ=255)
cGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCa < 1:6718166/93‑1 (MQ=255)
gTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAg > 2:5074650/1‑93 (MQ=255)
ttttGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCCGGCCAgc > 2:6323792/1‑93 (MQ=255)
ttttGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAgc < 1:707815/93‑1 (MQ=255)
ttttGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAgc < 1:6215432/93‑1 (MQ=255)
ttGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAgcgc > 2:6181062/1‑93 (MQ=255)
tGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGcgcg < 2:2840426/93‑1 (MQ=255)
cAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTg < 1:4124865/93‑1 (MQ=255)
gcgGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTcg > 2:1289554/1‑93 (MQ=255)
gcgGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTcc > 1:5393269/1‑92 (MQ=255)
gcgGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTAGGCCGCTTTCCAGGCCAGCGCGTGCTcg > 2:6127218/1‑93 (MQ=255)
gTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGcgcc > 1:5832875/1‑93 (MQ=255)
ttCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGcgccc > 2:5260207/1‑93 (MQ=255)
cagtgcagtgCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGcgcccgcc > 1:939345/1‑93 (MQ=255)
cagtgcagtgCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGcgcccgcc > 2:5647813/1‑93 (MQ=255)
gtgcagtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGt < 2:203746/93‑1 (MQ=255)
tgcagtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCACCCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGtt < 2:7775083/93‑1 (MQ=255)
tgcagtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGtt < 2:306519/93‑1 (MQ=255)
tgcagtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGtt > 2:93490/1‑93 (MQ=255)
tgcagtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGtt < 1:2595314/93‑1 (MQ=255)
gcagtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTa > 2:1227249/1‑93 (MQ=255)
cagtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTAc > 1:7891913/1‑93 (MQ=255)
agtgcCTGCATTCCCCGGAGCAGCAAAAGCAGTCTCAACCAGCGGCGACTGGGCCGTTTTCCAGCCCAGCGCGTGCTCGCGCCCGCCGTTAcc < 2:2145752/93‑1 (MQ=255)
agtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTAcc > 1:1564662/1‑93 (MQ=255)
agtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTAcc > 1:106148/1‑93 (MQ=255)
agtgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTAcc > 2:1707365/1‑93 (MQ=255)
tgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCaa > 1:7334293/1‑93 (MQ=255)
tgcCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCaa < 2:4844922/93‑1 (MQ=255)
gcCTGCATTCCCCGGAGCAGAAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAAt < 2:4492500/93‑1 (MQ=255)
ccTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATc < 1:120163/93‑1 (MQ=255)
ccTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATc < 1:3053682/93‑1 (MQ=255)
ccTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATc < 1:3812538/93‑1 (MQ=255)
ccTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATc > 2:4054317/1‑93 (MQ=255)
cTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCa > 2:297335/1‑93 (MQ=255)
tGCATTACCCGGAGCGGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCAc > 2:3539979/1‑93 (MQ=255)
tGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCAc < 1:1531034/93‑1 (MQ=255)
tGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGCCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCAc < 2:69491/93‑1 (MQ=255)
aTTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTaa > 1:4888455/1‑93 (MQ=255)
aTTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACGGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTaa < 1:1314489/93‑1 (MQ=255)
ttACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAAt < 2:2743266/93‑1 (MQ=255)
ttACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAAt < 1:7119643/93‑1 (MQ=255)
ttACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAAt > 1:7589625/1‑93 (MQ=255)
ccGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACtt < 2:6673145/93‑1 (MQ=255)
cgaagcagcAAAACCAGCCTGACCCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACttt < 2:3126681/90‑1 (MQ=255)
cGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACttt > 1:4838331/1‑93 (MQ=255)
ggAGCAGCAAAAACAGTCTCAACTAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTc < 1:4741756/93‑1 (MQ=255)
ggAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGCCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTc < 1:630202/93‑1 (MQ=255)
gAGCAGCAAAAGCAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCa < 2:2442910/93‑1 (MQ=255)
gAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGCCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCa < 1:7763889/93‑1 (MQ=255)
gcagcaAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATc < 2:4565953/93‑1 (MQ=255)
|
CGAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAACAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATC > NC_000913/4203332‑4203510
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTGCGAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAACAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATCTAT > NC_000913/4203329‑4203513
|
GTGCGAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGC < SRR4302543.4247529/94‑1 (MQ=60)
TGCGAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCA < SRR4302543.1914325/94‑1 (MQ=60)
CGAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAA > SRR4302543.794847/1‑94 (MQ=60)
GAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAA > SRR4302543.1997753/1‑94 (MQ=60)
AAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAA > SRR4302543.82547/1‑94 (MQ=60)
AAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAA > SRR4302543.5849360/1‑94 (MQ=60)
AATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAAC < SRR4302543.328475/94‑1 (MQ=60)
AATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAAC < SRR4302543.458920/94‑1 (MQ=60)
AATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAAC < SRR4302543.2388374/94‑1 (MQ=60)
AATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAAC < SRR4302543.2074560/94‑1 (MQ=60)
ATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACA > SRR4302543.904482/1‑94 (MQ=60)
ATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACA > SRR4302543.3435172/1‑94 (MQ=60)
ATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACA > SRR4302543.4787412/1‑94 (MQ=60)
ATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACA > SRR4302543.2639382/1‑94 (MQ=60)
ATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACA > SRR4302543.7634838/1‑94 (MQ=60)
TCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAG > SRR4302543.513618/1‑94 (MQ=60)
TCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAG < SRR4302543.1264423/94‑1 (MQ=60)
CAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTC < SRR4302543.7543303/94‑1 (MQ=60)
CAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTC > SRR4302543.7169907/1‑94 (MQ=60)
CAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTC < SRR4302543.7796660/94‑1 (MQ=60)
CAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTC < SRR4302543.4060405/94‑1 (MQ=60)
AACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCT < SRR4302543.1954342/94‑1 (MQ=60)
CAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCA > SRR4302543.2648270/1‑94 (MQ=60)
CAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCA > SRR4302543.2217012/1‑94 (MQ=60)
AGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAA < SRR4302543.1732758/94‑1 (MQ=60)
AGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAA < SRR4302543.7434757/94‑1 (MQ=60)
AGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAA < SRR4302543.3755481/94‑1 (MQ=60)
AGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAA > SRR4302543.7013722/1‑94 (MQ=60)
CGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACC < SRR4302543.4000405/94‑1 (MQ=60)
CGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACC < SRR4302543.6938558/94‑1 (MQ=60)
GCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCA > SRR4302543.3679314/1‑94 (MQ=60)
GCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCA > SRR4302543.729369/1‑94 (MQ=60)
GCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCA < SRR4302543.2062520/94‑1 (MQ=60)
CCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAG < SRR4302543.6839845/94‑1 (MQ=60)
CGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGC < SRR4302543.1549489/94‑1 (MQ=60)
GGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCG > SRR4302543.2556535/1‑94 (MQ=60)
GGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCG > SRR4302543.6173802/1‑94 (MQ=60)
GGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCG > SRR4302543.4900849/1‑94 (MQ=60)
GGGATATCGGTCACGCCAATAGCAACGGTTTGCAGCGCGGGTTCCAGTGCAGTGTCTGAATTAACAGGTGCAACAAAAACAGTCgcaagcaggg > SRR4302543.4037561/1‑84 (MQ=60)
GGGAAATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCG < SRR4302543.6790770/94‑1 (MQ=60)
GGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGG > SRR4302543.2082208/1‑94 (MQ=60)
GGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGG > SRR4302543.3821172/1‑94 (MQ=60)
GGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGG < SRR4302543.3330267/94‑1 (MQ=60)
GGATATCGGGCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGG < SRR4302543.6371644/94‑1 (MQ=60)
GATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGC > SRR4302543.367525/1‑94 (MQ=60)
ATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCG > SRR4302543.2372526/1‑94 (MQ=60)
ATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCG < SRR4302543.3362547/94‑1 (MQ=60)
ATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCG > SRR4302543.7981462/1‑94 (MQ=60)
ATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAACAAAAACAGTCTCAACCAGCGGCG > SRR4302543.6915660/1‑94 (MQ=60)
TATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGA < SRR4302543.5235131/94‑1 (MQ=60)
TATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGA < SRR4302543.4174543/94‑1 (MQ=60)
TATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGA > SRR4302543.7475525/1‑94 (MQ=60)
AATCGCTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTCCCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGA < SRR4302543.4174541/94‑1 (MQ=60)
ATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGTAGCAGCAAAAACAGTCTCAACCAGCGGCGAC > SRR4302543.4974914/1‑94 (MQ=60)
ATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGAC < SRR4302543.1430746/94‑1 (MQ=60)
TCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACT < SRR4302543.5311822/94‑1 (MQ=60)
TCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACT < SRR4302543.5762034/94‑1 (MQ=60)
TCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACT < SRR4302543.5759430/94‑1 (MQ=60)
CACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCC > SRR4302543.5542295/1‑94 (MQ=60)
ACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCG < SRR4302543.421267/94‑1 (MQ=60)
ACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCG < SRR4302543.7880640/94‑1 (MQ=60)
GCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCT > SRR4302543.7710131/1‑94 (MQ=60)
CCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTT > SRR4302543.7236199/1‑94 (MQ=60)
CAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTT > SRR4302543.7636341/1‑94 (MQ=60)
CAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTT > SRR4302543.7002590/1‑94 (MQ=60)
CAATAGCAACGTTTGGCAGCGAGGGTTCCAGTGCAGTGCCGGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTT < SRR4302543.2048911/94‑1 (MQ=60)
AATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTC > SRR4302543.1161000/1‑94 (MQ=60)
ATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCC > SRR4302543.2663869/1‑94 (MQ=60)
TAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCA < SRR4302543.755942/94‑1 (MQ=60)
AGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAG < SRR4302543.7394336/94‑1 (MQ=60)
AGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAG < SRR4302543.1805870/94‑1 (MQ=60)
AGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAG > SRR4302543.7734384/1‑94 (MQ=60)
CAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGC > SRR4302543.4135383/1‑94 (MQ=60)
CAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGC > SRR4302543.1924837/1‑94 (MQ=60)
AACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCC > SRR4302543.5722562/1‑94 (MQ=60)
AACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCC > SRR4302543.1537752/1‑94 (MQ=60)
ACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCA < SRR4302543.6001938/94‑1 (MQ=60)
ACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCA < SRR4302543.7310678/94‑1 (MQ=60)
CGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAG < SRR4302543.6781662/94‑1 (MQ=60)
CGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAG > SRR4302543.4797067/1‑94 (MQ=60)
CGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAG < SRR4302543.4001093/94‑1 (MQ=60)
GTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGC < SRR4302543.7030618/94‑1 (MQ=60)
GTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGC < SRR4302543.3462788/94‑1 (MQ=60)
GTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGC < SRR4302543.7030619/94‑1 (MQ=60)
GTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGC > SRR4302543.7170536/1‑94 (MQ=60)
GTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGC < SRR4302543.217154/94‑1 (MQ=60)
GTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGC > SRR4302543.4555369/1‑94 (MQ=60)
GTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCAGCGACTGGGCCGCTTTCCAGGCCAGC > SRR4302543.6882526/1‑94 (MQ=60)
TTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCG < SRR4302543.714252/94‑1 (MQ=60)
TTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCG < SRR4302543.53431/94‑1 (MQ=60)
TTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCG < SRR4302543.6274107/94‑1 (MQ=60)
TTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGaagcagtc < SRR4302543.7240426/94‑9 (MQ=60)
TTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGC < SRR4302543.813273/94‑1 (MQ=60)
GCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGTAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTG > SRR4302543.1398644/1‑94 (MQ=60)
CAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGC < SRR4302543.4162051/94‑1 (MQ=60)
CAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGC > SRR4302543.7797265/1‑94 (MQ=60)
AGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCT > SRR4302543.5862130/1‑94 (MQ=60)
CGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCG < SRR4302543.1749904/94‑1 (MQ=60)
CGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCC > SRR4302543.5442306/1‑94 (MQ=60)
GGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGC > SRR4302543.4692101/1‑94 (MQ=60)
GGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCC > SRR4302543.5885926/1‑94 (MQ=60)
GGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCC > SRR4302543.373444/1‑94 (MQ=60)
TCCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGC > SRR4302543.6282104/1‑94 (MQ=60)
CCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCC > SRR4302543.947551/1‑94 (MQ=60)
CCAGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCC < SRR4302543.5007192/94‑1 (MQ=60)
AGTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGT > SRR4302543.4161306/1‑94 (MQ=60)
GTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTT < SRR4302543.3052214/94‑1 (MQ=60)
GTGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTT > SRR4302543.6831549/1‑94 (MQ=60)
TGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTC > SRR4302543.6888834/1‑94 (MQ=60)
TGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTA < SRR4302543.2618896/94‑1 (MQ=60)
TGCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTA > SRR4302543.319210/1‑94 (MQ=60)
GCAGTGCCTGCATTACCCGGAGCAGCAAAACCAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTAC < SRR4302543.5927150/94‑1 (MQ=60)
GCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTAC > SRR4302543.3845459/1‑94 (MQ=60)
GCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTAC > SRR4302543.7966133/1‑94 (MQ=60)
GCAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTAC > SRR4302543.1334013/1‑94 (MQ=60)
CAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACC > SRR4302543.107124/1‑94 (MQ=60)
CAGTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACC > SRR4302543.1578639/1‑94 (MQ=60)
CAGTGCCTGCATTACCCGAAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACC < SRR4302543.4334265/94‑1 (MQ=60)
GTGCCTGCATTACCCGGAGCAGCTAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAA > SRR4302543.1311522/1‑94 (MQ=60)
GTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAA > SRR4302543.7422889/1‑94 (MQ=60)
GTGCCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAA > SRR4302543.7404863/1‑94 (MQ=60)
CCTGCTTTCCCCGGAGCAGCAAAAACAGTCTAACCCGGCGGCGACTGGGCCGCTGTCCAGCCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCA < SRR4302543.121455/94‑1 (MQ=60)
CCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCA < SRR4302543.121246/94‑1 (MQ=60)
CCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCA < SRR4302543.3081184/94‑1 (MQ=60)
CCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCA < SRR4302543.3846146/94‑1 (MQ=60)
CCTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGGGCTCCCACCCTCCGTTACCAATCA > SRR4302543.1433285/1‑94 (MQ=60)
CTGCATTACCCGGAGCAGCAAAAACGGTCTCACCCAGCGGCGACGGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCAC < SRR4302543.5977202/94‑1 (MQ=60)
CTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCAC < SRR4302543.2808234/94‑1 (MQ=60)
CTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCAC > SRR4302543.1576785/1‑94 (MQ=60)
CTGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCAC > SRR4302543.4608279/1‑94 (MQ=60)
TGCATTCCCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACT < SRR4302543.1544758/94‑1 (MQ=60)
TGCATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACT < SRR4302543.1544759/94‑1 (MQ=60)
CATTCCCCGGAGCAGCAAAAACAGTCTCACCCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAA < SRR4302543.1801416/94‑1 (MQ=60)
CATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAA > SRR4302543.4933009/1‑94 (MQ=60)
CATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAA > SRR4302543.5719814/1‑94 (MQ=60)
CATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAA < SRR4302543.6121186/94‑1 (MQ=60)
ATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAAT > SRR4302543.7661740/1‑94 (MQ=60)
ATTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACGGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAAT < SRR4302543.1326168/94‑1 (MQ=60)
TTACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATA < SRR4302543.7188813/94‑1 (MQ=60)
ACCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACT > SRR4302543.1611535/1‑94 (MQ=60)
ACCAGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGTCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACT < SRR4302543.390255/94‑1 (MQ=60)
CCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTT > SRR4302543.2293566/1‑94 (MQ=60)
CCCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTT > SRR4302543.890370/1‑94 (MQ=60)
CCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTT < SRR4302543.6304542/94‑1 (MQ=60)
CCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTT > SRR4302543.3481816/1‑94 (MQ=60)
CCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTT > SRR4302543.5927169/1‑94 (MQ=60)
CCGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTT > SRR4302543.4882456/1‑94 (MQ=60)
CGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTC < SRR4302543.5337545/94‑1 (MQ=60)
CGGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTC > SRR4302543.7430623/1‑94 (MQ=60)
GGAGCAGCAAAAACAGTCTCAACTAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCA < SRR4302543.4785081/94‑1 (MQ=60)
GGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCA > SRR4302543.5160779/1‑94 (MQ=60)
GGAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGCCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCA < SRR4302543.635965/94‑1 (MQ=60)
GAGCAGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGCCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCAT < SRR4302543.7837156/94‑1 (MQ=60)
AGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATCTAT < SRR4302543.6214028/94‑1 (MQ=60)
AGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATCTAT > SRR4302543.6426643/1‑94 (MQ=60)
AGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATCTAT < SRR4302543.2596709/94‑1 (MQ=60)
AGCAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATCTAT > SRR4302543.3009278/1‑94 (MQ=60)
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GTGCGAAATCCAACAGCGCCGGGATATCGGTCACGCCAATAGCAACGTTTTGCAGCGCGGGTTCCAGTGCAGTGCCTGCATTACCCGGAGCAACAAAAACAGTCTCAACCAGCGGCGACTGGGCCGCTTTCCAGGCCAGCGCGTGCTCGCGCCCGCCGTTACCAATCACTAATACTTTCATCTAT > NC_000913/4203329‑4203513
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
