Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A0 F0 I1 R1	245	579.6	28867798	97.7%	28203838	96.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,077,514	Δ1 bp	intergenic (‑165/+149)	cmtB ← / ← tktA	PTS system mannitol‑specific enzyme IIA component/transketolase 1 isozyme

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,077,513	0	C	.	99.8%	1922.1 / ‑3.9	400	intergenic (‑164/+150)	cmtB/tktA	PTS system mannitol‑specific enzyme IIA component/transketolase 1 isozyme
Reads supporting (aligned to +/- strand): ref base C (0/1); new base . (234/165); total (234/166)
Fisher's exact test for biased strand distribution p-value = 4.15e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 416 total aligned reads displayed.

AAAGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATACCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAA  >  NC_000913/3077418‑3077604

aaaGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAc                                                                                             <  2:10523738/96‑1 (MQ=255)

  aGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAcgc                                                                                           >  2:11680138/1‑94 (MQ=255)

  aGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAcgc                                                                                           <  1:12689702/96‑3 (MQ=255)

    cAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATAcgcat                                                                                         >  2:9737587/1‑92 (MQ=255)

      atggAGCAGGGAAACCGGTGTTTTTAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCatat                                                                                      <  1:12216138/93‑1 (MQ=255)

       ttGAGCAGAGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATc                                                                                     <  2:6561341/96‑1 (MQ=255)

        tGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTTAATA‑CGCATATca                                                                                    <  1:11375687/96‑2 (MQ=255)

         gAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGt                                                                                   <  1:4995863/96‑1 (MQ=255)

         gAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGt                                                                                   <  1:549140/96‑1 (MQ=255)

         gAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGt                                                                                   <  1:1866683/96‑1 (MQ=255)

          aGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTg                                                                                  <  2:1760128/96‑1 (MQ=255)

           gCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAATAAATGTCAATA‑CGCATATCGTGa                                                                                 >  1:12556439/1‑96 (MQ=255)

           gCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGa                                                                                 >  1:13342658/1‑96 (MQ=255)

             aGGGAAGCCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATATCATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATg                                                                               <  2:12789226/96‑1 (MQ=255)

             aGGGAAACCTGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATg                                                                               <  2:3966976/96‑1 (MQ=255)

             aGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATg                                                                               >  2:12445218/1‑96 (MQ=255)

               ggAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCa                                                                             >  1:10855614/1‑96 (MQ=255)

                gAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCat                                                                            <  1:13830494/96‑1 (MQ=255)

                 aaaCCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCata                                                                           >  1:5837324/1‑96 (MQ=255)

                    ccGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTa                                                                        <  2:11567078/96‑1 (MQ=255)

                    ccGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTa                                                                        >  1:4360014/1‑96 (MQ=255)

                      ggTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACa                                                                      >  2:13286571/1‑96 (MQ=255)

                      ggTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACa                                                                      >  2:412812/1‑96 (MQ=255)

                       gtgtTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACAt                                                                     <  1:3926724/96‑1 (MQ=255)

                       gtgtTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACAt                                                                     >  2:8421690/1‑96 (MQ=255)

                         gtTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATaa                                                                   <  1:2224030/96‑1 (MQ=255)

                         gtTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATaa                                                                   >  2:2386776/1‑96 (MQ=255)

                          ttttGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACATCAAATGTCAATA‑CGCATATCGTGATGCATATTACATAAt                                                                  >  1:14256249/1‑96 (MQ=255)

                          ttttGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAAt                                                                  >  2:9073839/1‑96 (MQ=255)

                           tttGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAAtt                                                                 >  2:6793954/1‑96 (MQ=255)

                               aaaaCAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGata                                                             >  1:3444257/1‑96 (MQ=255)

                                aaaCAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTGAATA‑CGCATATCGTGATGCATATTACATAATTGatat                                                            >  2:12226758/1‑96 (MQ=255)

                                aaaCAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGatat                                                            >  1:5172503/1‑96 (MQ=255)

                                  aCAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtattt                                                          >  1:13222681/1‑96 (MQ=255)

                                   cAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtattta                                                         >  2:11994179/1‑96 (MQ=255)

                                    aGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGAtatttat                                                        >  2:3568641/1‑96 (MQ=255)

                                      tGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTg                                                      >  2:8858989/1‑96 (MQ=255)

                                      tGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTg                                                      <  2:9237929/96‑1 (MQ=255)

                                        agttattaATTTCTTTTATAACATTGAGTTATAGATATAACAATAAATGTCAATA‑CGCATATCGTGATGCATACTACATAATTAATATTTATTGCa                                                    >  1:7643090/3‑96 (MQ=255)

                                         attattAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCat                                                   >  1:8863747/1‑96 (MQ=255)

                                         attattAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCat                                                   <  1:9572075/96‑1 (MQ=255)

                                         attattAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCat                                                   >  2:9461034/1‑96 (MQ=255)

                                         attattAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCat                                                   >  2:11059576/1‑96 (MQ=255)

                                         attattAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCat                                                   >  1:12386589/1‑96 (MQ=255)

                                          taattaATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCata                                                  >  1:10546850/3‑96 (MQ=255)

                                           tattaATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCatat                                                 >  2:4408005/1‑96 (MQ=255)

                                           tattaATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCatat                                                 >  1:7136595/1‑96 (MQ=255)

                                             ttaATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATaa                                               >  1:7229767/1‑96 (MQ=255)

                                              taATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCatat                                                 >  2:10121292/1‑93 (MQ=255)

                                               aaTTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACTTAATTGATATTTATTGCATATAAat                                             >  2:13728155/1‑96 (MQ=255)

                                               aaTTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAat                                             <  2:10783354/96‑1 (MQ=255)

                                               aaTTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAat                                             <  1:8484988/96‑1 (MQ=255)

                                                   tCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATAttt                                         >  1:9774134/1‑96 (MQ=255)

                                                    cTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTtg                                        >  2:1393905/1‑96 (MQ=255)

                                                    cTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTtg                                        >  2:4628106/1‑96 (MQ=255)

                                                     ttATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAATTATTtgt                                       >  1:3185841/1‑96 (MQ=255)

                                                        tataACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTTAt                                    <  1:6839633/96‑1 (MQ=255)

                                                        tataACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGAt                                    >  2:6649338/1‑96 (MQ=255)

                                                         ataACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATc                                   >  2:7248731/1‑96 (MQ=255)

                                                         ataACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATc                                   >  2:7753489/1‑96 (MQ=255)

                                                          taACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCt                                  >  1:3693217/1‑96 (MQ=255)

                                                          taACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCt                                  >  1:419825/1‑96 (MQ=255)

                                                            aCATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTac                                <  2:13619507/96‑1 (MQ=255)

                                                             cATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGAt                                    <  1:8585015/91‑1 (MQ=255)

                                                             cATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGAt                                    >  2:8585015/1‑91 (MQ=255)

                                                             cATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTaca                               <  2:5377201/96‑1 (MQ=255)

                                                             cATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTaca                               >  1:8749336/1‑96 (MQ=255)

                                                               ttGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaac                             <  1:6640216/96‑1 (MQ=255)

                                                               ttGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaac                             <  2:3006264/96‑1 (MQ=255)

                                                               ttGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaac                             <  2:2031189/96‑1 (MQ=255)

                                                               ttGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaac                             >  1:8212308/1‑96 (MQ=255)

                                                                tGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTacaaca                            >  1:10036860/1‑96 (MQ=255)

                                                                 gAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAacac                           >  2:7582269/1‑96 (MQ=255)

                                                                   gTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGc                         >  2:2196880/1‑96 (MQ=255)

                                                                   gTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGc                         >  1:1110095/1‑96 (MQ=255)

                                                                   gTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGc                         <  2:6149119/96‑1 (MQ=255)

                                                                   gTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGc                         >  1:2403247/1‑96 (MQ=255)

                                                                    ttATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGcc                        >  1:11990728/1‑96 (MQ=255)

                                                                     tataGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCt                       <  1:7063922/96‑1 (MQ=255)

                                                                     tataGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCt                       <  2:5045026/96‑1 (MQ=255)

                                                                     tataGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCt                       >  1:5700203/1‑96 (MQ=255)

                                                                      ataGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCtt                      >  2:184220/1‑96 (MQ=255)

                                                                      ataGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCtt                      <  1:2812938/96‑1 (MQ=255)

                                                                        aGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTAt                    >  2:14237638/1‑96 (MQ=255)

                                                                        aGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTAt                    >  1:9149315/1‑96 (MQ=255)

                                                                         gATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATc                   >  2:328842/1‑96 (MQ=255)

                                                                           tataACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTa                 >  1:156557/1‑96 (MQ=255)

                                                                             taACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTAtt               >  2:1558857/1‑96 (MQ=255)

                                                                              aacaacAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTg              >  2:87736/1‑96 (MQ=255)

                                                                               acaacaAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGc             >  1:627927/1‑96 (MQ=255)

                                                                                  acaaATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTg          >  2:3429033/1‑96 (MQ=255)

                                                                                  acaaATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTg          >  2:2648375/1‑96 (MQ=255)

                                                                                   caaATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGt         <  2:3849798/96‑1 (MQ=255)

                                                                                   caaATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGt         >  1:11603663/1‑96 (MQ=255)

                                                                                     aaTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTcc       <  2:631395/96‑1 (MQ=255)

                                                                                     aaTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTcc       <  2:7306782/96‑1 (MQ=255)

                                                                                     aaTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTcc       >  2:11376249/1‑96 (MQ=255)

                                                                                      aTGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCg      <  1:9047752/96‑1 (MQ=255)

                                                                                         tCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCaa   >  2:7043211/1‑96 (MQ=255)

                                                                                          cAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCaaa  >  1:8675496/1‑96 (MQ=255)

AAAGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATACCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAA  >  NC_000913/3077418‑3077604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output Only 200 of 212 total aligned reads displayed.

AATGAAAGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATACCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATC  >  NC_000913/3077414‑3077614

AATGAAAGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAGTTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATACG                                                                                                      >  SRR4302518.3382049/1‑101 (MQ=60)

AATGAAAGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATNNN                                                                                                      >  SRR4302518.8875107/1‑101 (MQ=60)

AATGAAAGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATACG                                                                                                      >  SRR4302518.6461887/1‑101 (MQ=60)

    AAAGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATA                                                                                                 >  SRR4302518.5357746/1‑101 (MQ=60)

     NNNCAATGGAGCAGGGAAACCGGTGTTTTTAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATAT                                                                                                <  SRR4302518.12795030/101‑1 (MQ=60)

      AGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATCGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATC                                                                                               <  SRR4302518.7235388/101‑1 (MQ=60)

       NNNATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTTAATA‑CGCATATCA                                                                                              <  SRR4302518.11908670/101‑1 (MQ=60)

       NNNATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCG                                                                                              <  SRR4302518.14855868/101‑1 (MQ=60)

        NNNTTGAGCAGCGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGCTATAGATATAACAACAAATGTCAATA‑CGCATATCGT                                                                                             <  SRR4302518.9773910/101‑1 (MQ=60)

        CAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGT                                                                                             <  SRR4302518.5255320/101‑1 (MQ=60)

        CAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGT                                                                                             <  SRR4302518.570537/101‑1 (MQ=60)

        CAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGT                                                                                             <  SRR4302518.1950761/101‑1 (MQ=60)

         NNNTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTG                                                                                            <  SRR4302518.9126418/101‑1 (MQ=60)

         AATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTG                                                                                            <  SRR4302518.6839140/101‑1 (MQ=60)

          ATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGA                                                                                           <  SRR4302518.7012684/101‑1 (MQ=60)

           TTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTNNN                                                                                          >  SRR4302518.9023121/1‑101 (MQ=60)

              NNNAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCA                                                                                       <  SRR4302518.7493614/101‑1 (MQ=60)

              CGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATNNN                                                                                       >  SRR4302518.12236215/1‑101 (MQ=60)

               NNNGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCAT                                                                                      <  SRR4302518.14463512/101‑1 (MQ=60)

               GCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAATAAATGTCAATA‑CGCATATCGTGATGNNN                                                                                      >  SRR4302518.13145542/1‑101 (MQ=60)

               GCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGNNN                                                                                      >  SRR4302518.13956702/1‑101 (MQ=60)

                CAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATA                                                                                     <  SRR4302518.6182982/101‑1 (MQ=60)

                 AGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTTATTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATAT                                                                                    >  SRR4302518.3998028/1‑101 (MQ=60)

                 AGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCANNN                                                                                    >  SRR4302518.10942532/1‑101 (MQ=60)

                  GGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATNNN                                                                                   >  SRR4302518.12861509/1‑101 (MQ=60)

                   GGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATANNN                                                                                  >  SRR4302518.11365056/1‑101 (MQ=60)

                    GAAACCGGTGTTTCGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATNNN                                                                                 >  SRR4302518.9385235/1‑101 (MQ=60)

                     AAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACA                                                                                >  SRR4302518.6133024/1‑101 (MQ=60)

                     AAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACA                                                                                >  SRR4302518.160654/1‑101 (MQ=60)

                      NNNCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACTT                                                                               <  SRR4302518.12024589/101‑1 (MQ=60)

                      NNNCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACAT                                                                               <  SRR4302518.8130628/101‑1 (MQ=60)

                      NNNCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACAT                                                                               <  SRR4302518.11757092/101‑1 (MQ=60)

                      AACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTANNN                                                                               >  SRR4302518.13933793/1‑101 (MQ=60)

                      AACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACAT                                                                               <  SRR4302518.4114018/101‑1 (MQ=60)

                        NNNGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAG                                                                             <  SRR4302518.11814101/101‑1 (MQ=60)

                        CCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAA                                                                             >  SRR4302518.3831419/1‑101 (MQ=60)

                        CCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAA                                                                             <  SRR4302518.2331251/101‑1 (MQ=60)

                        CCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAA                                                                             >  SRR4302518.4578634/1‑101 (MQ=60)

                          NNNGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATT                                                                           <  SRR4302518.9697090/101‑1 (MQ=60)

                          NNNGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAAAT                                                                           <  SRR4302518.11222128/101‑1 (MQ=60)

                          GGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATANNN                                                                           >  SRR4302518.11534759/1‑101 (MQ=60)

                          GGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATT                                                                           >  SRR4302518.4564148/1‑101 (MQ=60)

                              TTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACATCAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGNNN                                                                       >  SRR4302518.14913663/1‑101 (MQ=60)

                              TTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGNNN                                                                       >  SRR4302518.12115350/1‑101 (MQ=60)

                              TTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATA                                                                       >  SRR4302518.937743/1‑101 (MQ=60)

                              TTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATA                                                                       >  SRR4302518.906390/1‑101 (MQ=60)

                              TTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATA                                                                       <  SRR4302518.3505417/101‑1 (MQ=60)

                              NNNTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATA                                                                       <  SRR4302518.8291027/101‑1 (MQ=60)

                               TTTGAAAAAAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGANNN                                                                      >  SRR4302518.13544642/1‑101 (MQ=60)

                                 TGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTT                                                                    <  SRR4302518.1879228/101‑1 (MQ=60)

                                 TGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTT                                                                    <  SRR4302518.3257090/101‑1 (MQ=60)

                                  GAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTA                                                                   >  SRR4302518.3505266/1‑101 (MQ=60)

                                   GAAACAGTGAATTATTAATTTCTTATATAACATTGAGNTATAGATATAACAACAAATGTCAATA‑CGCATATNNTNANNNNTATTACAnnnnnnnnnnnnnn                                                                  >  SRR4302518.11840355/1‑87 (MQ=60)

                                   AAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTAT                                                                  >  SRR4302518.3604614/1‑101 (MQ=60)

                                    NNNCAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATT                                                                 <  SRR4302518.15028559/101‑1 (MQ=60)

                                    AAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATT                                                                 >  SRR4302518.1887907/1‑101 (MQ=60)

                                    AAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATT                                                                 >  SRR4302518.5439177/1‑101 (MQ=60)

                                     NNNAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTCCATAATTGATATTGATTG                                                                <  SRR4302518.13225126/101‑1 (MQ=60)

                                     NNNAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTG                                                                <  SRR4302518.12488181/101‑1 (MQ=60)

                                     NNNAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTG                                                                <  SRR4302518.9363132/101‑1 (MQ=60)

                                     AACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTG                                                                >  SRR4302518.3976095/1‑101 (MQ=60)

                                      NNNGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGC                                                               <  SRR4302518.7454724/101‑1 (MQ=60)

                                      ACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATNNN                                                               >  SRR4302518.13832505/1‑101 (MQ=60)

                                        NNNGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTCCATAATTGATATTTATTGCAT                                                             <  SRR4302518.13475086/101‑1 (MQ=60)

                                        NNNGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCAT                                                             <  SRR4302518.10035022/101‑1 (MQ=60)

                                        AGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCAT                                                             <  SRR4302518.5262240/101‑1 (MQ=60)

                                        AGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCAT                                                             <  SRR4302518.4337157/101‑1 (MQ=60)

                                        AGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCAT                                                             <  SRR4302518.539696/101‑1 (MQ=60)

                                         GTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATA                                                            <  SRR4302518.7305765/101‑1 (MQ=60)

                                          nnngatcTTAATTTCTTATATAACATTGCGTTATAGATATAACATCAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATAT                                                           <  SRR4302518.10599880/94‑1 (MQ=60)

                                          TGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATAT                                                           >  SRR4302518.5478595/1‑101 (MQ=60)

                                          TGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATAT                                                           >  SRR4302518.584750/1‑101 (MQ=60)

                                           GAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATNNN                                                          >  SRR4302518.9023667/1‑101 (MQ=60)

                                            AGTTATTAATTTCTTTTATAACATTGAGTTATAGATATAACAATAAATGTCAATA‑CGCATATCGTGATGCATACTACATAATTAATATTTATTGCATANNN                                                         >  SRR4302518.8032421/1‑101 (MQ=60)

                                            AATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAA                                                         >  SRR4302518.743754/1‑101 (MQ=60)

                                            AATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATANNN                                                         >  SRR4302518.8879965/1‑101 (MQ=60)

                                            AATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATANNN                                                         >  SRR4302518.7597608/1‑101 (MQ=60)

                                             ATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATNNN                                                        >  SRR4302518.12970660/1‑101 (MQ=60)

                                             ATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATNNN                                                        >  SRR4302518.9293525/1‑101 (MQ=60)

                                             ATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATNNN                                                        >  SRR4302518.10173912/1‑101 (MQ=60)

                                             ATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAA                                                        <  SRR4302518.6376073/101‑1 (MQ=60)

                                             ATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAA                                                        <  SRR4302518.5421840/101‑1 (MQ=60)

                                              TAATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATANNN                                                       >  SRR4302518.11040691/1‑101 (MQ=60)

                                              NNNTTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAAT                                                       <  SRR4302518.8899638/101‑1 (MQ=60)

                                               TATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTGCATAATTGATATTTATTGCATATAANNN                                                      >  SRR4302518.10550534/1‑101 (MQ=60)

                                               TATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAANNN                                                      >  SRR4302518.7512171/1‑101 (MQ=60)

                                               TATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATA                                                      >  SRR4302518.6097880/1‑101 (MQ=60)

                                                 TTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATNNN                                                    >  SRR4302518.7608070/1‑101 (MQ=60)

                                                  TAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTT                                                   <  SRR4302518.7247504/101‑1 (MQ=60)

                                                  NNNTTTCTTATATAACATTGAGTTATAGCTATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTT                                                   <  SRR4302518.13136198/101‑1 (MQ=60)

                                                  NNNTTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTT                                                   <  SRR4302518.7860241/101‑1 (MQ=60)

                                                   AATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATAGTACATAATTGATATTTATTGCATATAAATATNNN                                                  >  SRR4302518.9212474/1‑101 (MQ=60)

                                                    ATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGT                                                 >  SRR4302518.1413442/1‑101 (MQ=60)

                                                     TTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGAG                                                >  SRR4302518.4566960/1‑101 (MQ=60)

                                                      TTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGA                                               >  SRR4302518.2809587/1‑101 (MQ=60)

                                                       nnnccgatctCATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGAT                                              <  SRR4302518.9003463/91‑1 (MQ=60)

                                                       TCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTTAT                                              <  SRR4302518.7201508/101‑1 (MQ=60)

                                                       TCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTNNN                                              >  SRR4302518.10242942/1‑101 (MQ=60)

                                                       TCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTNNN                                              >  SRR4302518.13852841/1‑101 (MQ=60)

                                                       TCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGAT                                              <  SRR4302518.4098970/101‑1 (MQ=60)

                                                       TCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGAT                                              <  SRR4302518.2917365/101‑1 (MQ=60)

                                                         TTATATAACATTTAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTTATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCT                                            <  SRR4302518.6075111/101‑1 (MQ=60)

                                                         TTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAATTATTTGTGATCT                                            >  SRR4302518.3334262/1‑101 (MQ=60)

                                                         TTATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCT                                            >  SRR4302518.5883966/1‑101 (MQ=60)

                                                          TATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTA                                           >  SRR4302518.5914163/1‑101 (MQ=60)

                                                          TATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTA                                           <  SRR4302518.2819223/101‑1 (MQ=60)

                                                          NNNATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTGCATAATTGATATTTATTGCAAATAAATATTTGTGATCTA                                           <  SRR4302518.13226029/101‑1 (MQ=60)

                                                           NNNTAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTAC                                          <  SRR4302518.12811883/101‑1 (MQ=60)

                                                           ATATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTAC                                          <  SRR4302518.4425316/101‑1 (MQ=60)

                                                            TCTAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTNNN                                         >  SRR4302518.11106884/1‑101 (MQ=60)

                                                            TATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTGTTGCATATAAATATTTatgtcctata                                         >  SRR4302518.6648314/1‑91 (MQ=60)

                                                            TATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTNNN                                         >  SRR4302518.14667406/1‑101 (MQ=60)

                                                            TATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACA                                         <  SRR4302518.5018307/101‑1 (MQ=60)

                                                            TATAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACA                                         >  SRR4302518.5127382/1‑101 (MQ=60)

                                                              TAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACNNN                                       >  SRR4302518.8322214/1‑101 (MQ=60)

                                                              TAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAAC                                       >  SRR4302518.436236/1‑101 (MQ=60)

                                                              TAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAAC                                       >  SRR4302518.3866576/1‑101 (MQ=60)

                                                              TAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAAC                                       >  SRR4302518.6715691/1‑101 (MQ=60)

                                                              TAACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAAC                                       <  SRR4302518.6982765/101‑1 (MQ=60)

                                                              NNNCATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAAC                                       <  SRR4302518.8834272/101‑1 (MQ=60)

                                                              NNNCATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAAC                                       <  SRR4302518.10049491/101‑1 (MQ=60)

                                                               AACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACANNN                                      >  SRR4302518.7444674/1‑101 (MQ=60)

                                                               AACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACANNN                                      >  SRR4302518.7907280/1‑101 (MQ=60)

                                                               AACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACA                                      >  SRR4302518.2133845/1‑101 (MQ=60)

                                                                NNNTTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACTC                                     <  SRR4302518.11614723/101‑1 (MQ=60)

                                                                ACATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAANNN                                     >  SRR4302518.13935085/1‑101 (MQ=60)

                                                                 CTTTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACNNN                                    >  SRR4302518.7756488/1‑101 (MQ=60)

                                                                 CATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACNNN                                    >  SRR4302518.9174472/1‑101 (MQ=60)

                                                                 CATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACG                                    <  SRR4302518.4392986/101‑1 (MQ=60)

                                                                  NNNGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGC                                   <  SRR4302518.7520378/101‑1 (MQ=60)

                                                                  ATTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACANNN                                   >  SRR4302518.8676498/1‑101 (MQ=60)

                                                                   TTGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACNNN                                  >  SRR4302518.8618010/1‑101 (MQ=60)

                                                                    TGAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGNNN                                 >  SRR4302518.10513306/1‑101 (MQ=60)

                                                                    NNNGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCT                                 <  SRR4302518.7437388/101‑1 (MQ=60)

                                                                     GAGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTT                                <  SRR4302518.2946153/101‑1 (MQ=60)

                                                                      ATTTATAGATATAACAACAAATGTCAATA‑AGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCNNN                               >  SRR4302518.12652093/1‑101 (MQ=60)

                                                                      AGTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTA                               >  SRR4302518.3245819/1‑101 (MQ=60)

                                                                       GTTATAGATATAACAACAAATGTCAATA‑GGTATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTTTGATCTACAATACGCCTNNN                              >  SRR4302518.12024700/1‑101 (MQ=60)

                                                                       GTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTAT                              >  SRR4302518.2519651/1‑101 (MQ=60)

                                                                       GTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTAT                              <  SRR4302518.6150655/101‑1 (MQ=60)

                                                                       GTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTAT                              >  SRR4302518.1166486/1‑101 (MQ=60)

                                                                       GTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTAT                              >  SRR4302518.1154054/1‑101 (MQ=60)

                                                                       GTTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTNNN                              >  SRR4302518.9427960/1‑101 (MQ=60)

                                                                        TTATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTNNN                             >  SRR4302518.12562358/1‑101 (MQ=60)

                                                                         TTTAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTANNN                            >  SRR4302518.11129079/1‑101 (MQ=60)

                                                                         TATAGATATAACAACAAATGTGAA‑AAGGCATATCGGGATGCATATTACATAATTGATCTTTATTGCATATAAAAATTTGTTATCTACAACACGCCTgctct                            >  SRR4302518.4756153/1‑96 (MQ=60)

                                                                         TATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCT                            >  SRR4302518.5989273/1‑101 (MQ=60)

                                                                         TATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATAGCATATAAATATTTGTGATCTACAACACGCCTTANNN                            >  SRR4302518.12890504/1‑101 (MQ=60)

                                                                         TATAGATATAACAACAAATGTCAAT‑CCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCT                            <  SRR4302518.4478377/101‑1 (MQ=60)

                                                                          NNNGATATAACAACAAAGGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTA                           <  SRR4302518.10335310/101‑1 (MQ=60)

                                                                          ATAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTA                           >  SRR4302518.2168741/1‑101 (MQ=60)

                                                                           TAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTAT                          >  SRR4302518.2007712/1‑101 (MQ=60)

                                                                           TAGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCNNN                          >  SRR4302518.12768309/1‑101 (MQ=60)

                                                                            NNNTATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATT                         <  SRR4302518.9556892/101‑1 (MQ=60)

                                                                            NNNTATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATT                         <  SRR4302518.13184420/101‑1 (MQ=60)

                                                                            AGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTNNN                         >  SRR4302518.9590648/1‑101 (MQ=60)

                                                                            AGATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTNNN                         >  SRR4302518.14412922/1‑101 (MQ=60)

                                                                             NNNATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTC                        <  SRR4302518.9223051/101‑1 (MQ=60)

                                                                             GATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTG                        <  SRR4302518.3454623/101‑1 (MQ=60)

                                                                             GATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTANNN                        >  SRR4302518.8985933/1‑101 (MQ=60)

                                                                             AATATAACAAAAAAGGTCAATA‑CGCATATCGTAATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTG                        <  SRR4302518.1586017/101‑1 (MQ=60)

                                                                              ATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGC                       >  SRR4302518.3167390/1‑101 (MQ=60)

                                                                              ATATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGC                       <  SRR4302518.2440892/101‑1 (MQ=60)

                                                                               TATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCT                      >  SRR4302518.162990/1‑101 (MQ=60)

                                                                                ATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGNNN                     >  SRR4302518.12265711/1‑101 (MQ=60)

                                                                                ATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTT                     <  SRR4302518.6721079/101‑1 (MQ=60)

                                                                                ATAACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTT                     <  SRR4302518.1805813/101‑1 (MQ=60)

                                                                                ATAACAACAAATGACAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGNNN                     >  SRR4302518.14038405/1‑101 (MQ=60)

                                                                                 NNNCAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTG                    <  SRR4302518.12592374/101‑1 (MQ=60)

                                                                                   ACAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTC                  >  SRR4302518.652294/1‑101 (MQ=60)

                                                                                    CAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCC                 >  SRR4302518.4326453/1‑101 (MQ=60)

                                                                                    CAACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCC                 <  SRR4302518.5693704/101‑1 (MQ=60)

                                                                                     NNNAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCG                <  SRR4302518.10205346/101‑1 (MQ=60)

                                                                                     NNNAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCG                <  SRR4302518.9484995/101‑1 (MQ=60)

                                                                                     AACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCG                >  SRR4302518.2434280/1‑101 (MQ=60)

                                                                                      NNNAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGC               <  SRR4302518.8935358/101‑1 (MQ=60)

                                                                                      ACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCNNN               >  SRR4302518.9051057/1‑101 (MQ=60)

                                                                                      ACAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCNNN               >  SRR4302518.9201748/1‑101 (MQ=60)

                                                                                      ACAAATGTCAATA‑CGCATATCGTGATGCATACTACATAATTCATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGC               <  SRR4302518.7011692/101‑1 (MQ=60)

                                                                                       CAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTAGAACACGCCTTATCTATTGCTTGTCCNNN              >  SRR4302518.12973125/1‑101 (MQ=60)

                                                                                       CAAATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCNNN              >  SRR4302518.12150183/1‑101 (MQ=60)

                                                                                         AATGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAA            <  SRR4302518.1032093/101‑1 (MQ=60)

                                                                                           TGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAANNN          >  SRR4302518.9542149/1‑101 (MQ=60)

                                                                                           TGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACG          <  SRR4302518.3735679/101‑1 (MQ=60)

                                                                                           TGTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACG          <  SRR4302518.6869490/101‑1 (MQ=60)

                                                                                            GTCAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGG         <  SRR4302518.2659019/101‑1 (MQ=60)

                                                                                            GTCAATA‑CGCATAGCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAANNN         >  SRR4302518.14026950/1‑101 (MQ=60)

                                                                                             nnnaataCGCATATCGTGATGCATATTCCATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGG         <  SRR4302518.14823978/94‑1 (MQ=60)

                                                                                              CAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGGCTTATCTATTGCTTGTCCGCAAACGNNN       >  SRR4302518.13010990/1‑101 (MQ=60)

                                                                                              CAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGNNN       >  SRR4302518.9097482/1‑101 (MQ=60)

                                                                                              CAATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGAC       >  SRR4302518.3613619/1‑101 (MQ=60)

                                                                                               AATA‑CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACA      <  SRR4302518.1450844/101‑1 (MQ=60)

                                                                                                attaCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGNNN      >  SRR4302518.10750985/5‑101 (MQ=60)

                                                                                                  taCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACNNN    >  SRR4302518.12193809/3‑101 (MQ=60)

                                                                                                  taCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATA    >  SRR4302518.4447564/3‑101 (MQ=60)

                                                                                                  NNNGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATA    <  SRR4302518.13795934/101‑1 (MQ=60)

                                                                                                  NNNGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATA    <  SRR4302518.13797728/101‑1 (MQ=60)

                                                                                                    NNNATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATC  <  SRR4302518.13948738/101‑1 (MQ=60)

                                                                                                    CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATNNN  >  SRR4302518.12774162/1‑101 (MQ=60)

                                                                                                    CGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATC  <  SRR4302518.5256428/101‑1 (MQ=60)

AATGAAAGCAATTGAGCAGGGAAACCGGTGTTTTGAAAACAGTGAATTATTAATTTCTTATATAACATTGAGTTATAGATATAACAACAAATGTCAATACCGCATATCGTGATGCATATTACATAATTGATATTTATTGCATATAAATATTTGTGATCTACAACACGCCTTATCTATTGCTTGTCCGCAAACGGACATATC  >  NC_000913/3077414‑3077614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`