Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
88,227 |
T→C |
V67A (GTG→GCG) |
fruR → |
FruR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 88,227 | 0 | T | C | 100.0%
| 593.3
/ NA
| 187 | V67A (GTG→GCG) | fruR | FruR |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (87/100); total (87/100) |
Only 100 of 195 total aligned reads displayed.
AAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTG > NC_000913/88137‑88316
|
aaGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGa < 2:1053618/93‑1 (MQ=255)
aaGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGa > 2:2182270/1‑93 (MQ=255)
aaGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGa < 1:1085075/93‑1 (MQ=255)
aGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGAt < 2:3504292/93‑1 (MQ=255)
aGTCATGGCTGTGGTGCGCGAGCACAGTTACCCCCCGAACGCCGTGGCAGCAGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGAt < 1:2366906/93‑1 (MQ=255)
gTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATc < 2:199327/93‑1 (MQ=255)
aTGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATcccc < 1:2872863/93‑1 (MQ=255)
tGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCg > 1:2208884/1‑93 (MQ=255)
tGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCg < 2:1680399/93‑1 (MQ=255)
ggCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGa < 2:3665379/93‑1 (MQ=255)
ggCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGa > 2:3739239/1‑93 (MQ=255)
gCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGAt > 2:49946/1‑93 (MQ=255)
cTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATc > 2:3394970/1‑93 (MQ=255)
tgtgGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCt > 2:889567/1‑93 (MQ=255)
tgtgGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCt > 1:3057343/1‑93 (MQ=255)
tggttCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTgg < 2:930240/93‑1 (MQ=255)
ggtgCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGga < 1:3312077/93‑1 (MQ=255)
tgCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGgaga > 2:4369502/1‑93 (MQ=255)
gCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCACGATCTGGAGaa < 2:2084401/93‑1 (MQ=255)
cGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAac < 1:2281434/93‑1 (MQ=255)
cGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAac < 1:1451228/93‑1 (MQ=255)
cGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAac < 1:3201585/93‑1 (MQ=255)
tGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAacac > 1:4314105/1‑93 (MQ=255)
gAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACAcc > 1:4648246/1‑93 (MQ=255)
cacaATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGc < 2:3901777/93‑1 (MQ=255)
cacaATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGc < 2:4078703/93‑1 (MQ=255)
caATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCta > 1:686879/1‑93 (MQ=255)
aTTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCtata < 2:2669624/93‑1 (MQ=255)
aTTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCtata > 1:3424126/1‑93 (MQ=255)
aTTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCtata > 1:573944/1‑93 (MQ=255)
aTTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCtata > 2:4242522/1‑93 (MQ=255)
tACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATAcc < 1:1824395/93‑1 (MQ=255)
tACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCACCGATCTGGAGCACACCAGCTATAcc > 1:3168136/1‑93 (MQ=255)
caccCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGc > 2:2857444/1‑93 (MQ=255)
accCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCa > 2:3553049/1‑93 (MQ=255)
cccGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCAt < 1:1881585/93‑1 (MQ=255)
cccGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCAt > 1:1285580/1‑93 (MQ=255)
ccGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATc < 2:24498/93‑1 (MQ=255)
gAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGc > 2:771819/1‑93 (MQ=255)
gAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGc < 2:108339/93‑1 (MQ=255)
aaCGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCt > 2:4039451/1‑93 (MQ=255)
aaCGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCt > 2:2949110/1‑93 (MQ=255)
cgcgGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTaa < 1:2501669/93‑1 (MQ=255)
gCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAAc > 2:1654/1‑93 (MQ=255)
ccGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACt > 1:4005503/1‑93 (MQ=255)
cGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTa < 2:2980935/93‑1 (MQ=255)
tGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATc < 2:595659/93‑1 (MQ=255)
tGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATc > 2:1237993/1‑93 (MQ=255)
tGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATc < 1:2569197/93‑1 (MQ=255)
ggCAGCGGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCt < 2:242744/93‑1 (MQ=255)
gCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCtt < 2:1426448/93‑1 (MQ=255)
gCTGGTCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACCCCAGCTATACCCGCATCGCTAACTATCTTGaa < 2:2406153/93‑1 (MQ=255)
gCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGaa > 1:566633/1‑93 (MQ=255)
gCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGaa < 2:1179673/93‑1 (MQ=255)
cTGGGCTTCGTGCTGGACGCGCACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAAc < 1:1715917/93‑1 (MQ=255)
cTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAAc > 2:1557311/1‑93 (MQ=255)
cTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAAc > 1:3375821/1‑93 (MQ=255)
cTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAAc < 1:3496317/93‑1 (MQ=255)
tGGGCTTCGTGCGGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACg < 2:1823872/93‑1 (MQ=255)
gggCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGc > 1:2064240/1‑93 (MQ=255)
gggCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCAATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGc < 2:3876671/93‑1 (MQ=255)
ggCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGcc > 2:4207028/1‑93 (MQ=255)
ggCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGcc > 1:4269749/1‑93 (MQ=255)
gCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCa < 2:3143812/93‑1 (MQ=255)
gCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCa < 1:4455171/93‑1 (MQ=255)
gCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCa < 2:3536737/93‑1 (MQ=255)
cTTCGTGCTGGGCGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAg < 2:1261890/93‑1 (MQ=255)
cTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAg < 2:4547133/93‑1 (MQ=255)
tCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGgc < 1:484322/93‑1 (MQ=255)
gTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGgcgc < 1:802145/93‑1 (MQ=255)
tGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGcgcg > 1:3527097/1‑93 (MQ=255)
tGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCa < 2:4153260/93‑1 (MQ=255)
ggACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCaa > 1:978840/1‑93 (MQ=255)
gACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAAc < 1:2394960/93‑1 (MQ=255)
gACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAAc > 1:3693076/1‑93 (MQ=255)
aCGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACg > 2:2561200/1‑93 (MQ=255)
aCGCACACGTTCTATTGGTCTTGCGACCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACg < 2:3082996/93‑1 (MQ=255)
cGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACgg < 1:2730013/93‑1 (MQ=255)
gCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACggg < 2:3352474/93‑1 (MQ=255)
gCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACggg < 2:4656046/93‑1 (MQ=255)
gCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACggg < 2:2169010/93‑1 (MQ=255)
acacGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGt < 2:2760341/93‑1 (MQ=255)
acacGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGt < 1:2611796/93‑1 (MQ=255)
cacGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGtt > 1:2044082/1‑93 (MQ=255)
acGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTa > 1:3408130/1‑93 (MQ=255)
acGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTa > 2:3289059/1‑93 (MQ=255)
cGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTAt < 2:1528871/93‑1 (MQ=255)
gTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATc > 2:232393/1‑93 (MQ=255)
tCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCaa > 2:657441/1‑93 (MQ=255)
tATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAAct > 1:2821636/1‑93 (MQ=255)
tATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAAct > 1:876559/1‑93 (MQ=255)
aTTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAActg > 1:1139847/1‑93 (MQ=255)
ttGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAActgc > 2:2485680/1‑93 (MQ=255)
ttGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAActgc < 1:1150165/93‑1 (MQ=255)
ttGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAActgc < 1:4356172/93‑1 (MQ=255)
tGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAActgct > 2:1608204/1‑93 (MQ=255)
cTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGAtt < 1:2862802/93‑1 (MQ=255)
cTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGAtt < 1:3590398/93‑1 (MQ=255)
cTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGAtt < 1:1785993/93‑1 (MQ=255)
ttGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTg > 2:2318316/1‑93 (MQ=255)
|
AAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTG > NC_000913/88137‑88316
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCCTG > NC_000913/88135‑88320
|
AAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCG > SRR4302535.4404321/1‑94 (MQ=60)
AAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCG > SRR4302535.205513/1‑94 (MQ=60)
AAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCG > SRR4302535.560272/1‑94 (MQ=60)
AAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGAT < SRR4302535.1092789/94‑1 (MQ=60)
AGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATC > SRR4302535.2117423/1‑94 (MQ=60)
AGTCATGGCTGTGGTGCGCGAGCACAGTTACCCCCCGAACGCCGTGGCAGCAGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATC < SRR4302535.2383898/94‑1 (MQ=60)
GTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCC > SRR4302535.3522602/1‑94 (MQ=60)
GTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCC > SRR4302535.1825793/1‑94 (MQ=60)
ATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCG > SRR4302535.2224618/1‑94 (MQ=60)
ATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCG < SRR4302535.2893220/94‑1 (MQ=60)
GTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCT < SRR4302535.3426372/94‑1 (MQ=60)
CTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCT < SRR4302535.1213140/94‑1 (MQ=60)
CTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCT > SRR4302535.3078735/1‑94 (MQ=60)
TGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCATGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTG < SRR4302535.3323595/94‑1 (MQ=60)
GGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGTCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAG < SRR4302535.3364002/94‑1 (MQ=60)
GGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAG < SRR4302535.3335123/94‑1 (MQ=60)
CGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACA < SRR4302535.2297730/94‑1 (MQ=60)
CGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACA < SRR4302535.1461608/94‑1 (MQ=60)
CGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACA < SRR4302535.3223752/94‑1 (MQ=60)
GTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACAC > SRR4302535.4343615/1‑94 (MQ=60)
TGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACC > SRR4302535.4679730/1‑94 (MQ=60)
GAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCA > SRR4302535.2846584/1‑94 (MQ=60)
AGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAG < SRR4302535.4680200/94‑1 (MQ=60)
GCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGC > SRR4302535.1795802/1‑94 (MQ=60)
CACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCT > SRR4302535.3056042/1‑94 (MQ=60)
ACAATTCCCACCCGAACTGCGTGGCAGCTGGGCTTCCTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTA < SRR4302535.3123559/94‑1 (MQ=60)
ACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTA > SRR4302535.691692/1‑94 (MQ=60)
CAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTAT < SRR4302535.4002675/94‑1 (MQ=60)
CAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTAT > SRR4302535.2068089/1‑94 (MQ=60)
AATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATA > SRR4302535.577972/1‑94 (MQ=60)
AATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATA > SRR4302535.3447940/1‑94 (MQ=60)
TTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCACCGATCTGGAGCACACCAGCTATACC > SRR4302535.3190082/1‑94 (MQ=60)
TACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCC < SRR4302535.3436151/94‑1 (MQ=60)
TACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCC < SRR4302535.1837567/94‑1 (MQ=60)
TACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCC < SRR4302535.2711151/94‑1 (MQ=60)
ACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCAT > SRR4302535.1294743/1‑94 (MQ=60)
CCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATC < SRR4302535.2509709/94‑1 (MQ=60)
CCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATC > SRR4302535.2289158/1‑94 (MQ=60)
CCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATC < SRR4302535.1895147/94‑1 (MQ=60)
CCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCG > SRR4302535.2550824/1‑94 (MQ=60)
AACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTA > SRR4302535.2008996/1‑94 (MQ=60)
CGCGGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAAC < SRR4302535.2519712/94‑1 (MQ=60)
GCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACT > SRR4302535.4032903/1‑94 (MQ=60)
GCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACT < SRR4302535.717894/94‑1 (MQ=60)
GTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATC > SRR4302535.1313280/1‑94 (MQ=60)
TGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCT < SRR4302535.2587676/94‑1 (MQ=60)
GCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTG < SRR4302535.658949/94‑1 (MQ=60)
AGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAA > SRR4302535.570598/1‑94 (MQ=60)
GCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAAC > SRR4302535.3399299/1‑94 (MQ=60)
CTGGGCTTCGTGCTGGACGCGCACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACG < SRR4302535.1728330/94‑1 (MQ=60)
CTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACG < SRR4302535.4334556/94‑1 (MQ=60)
CTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACG < SRR4302535.3520615/94‑1 (MQ=60)
TGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGC > SRR4302535.2079120/1‑94 (MQ=60)
GGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCC > SRR4302535.4298983/1‑94 (MQ=60)
GGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCA > SRR4302535.4366916/1‑94 (MQ=60)
GGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCA > SRR4302535.3520211/1‑94 (MQ=60)
GCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAG < SRR4302535.3206856/94‑1 (MQ=60)
GCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAG < SRR4302535.4485724/94‑1 (MQ=60)
TCGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCG < SRR4302535.487715/94‑1 (MQ=60)
CGTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGC > SRR4302535.3663054/1‑94 (MQ=60)
GTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCG > SRR4302535.3551590/1‑94 (MQ=60)
GTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCG < SRR4302535.807781/94‑1 (MQ=60)
GTGCTGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCG > SRR4302535.4637710/1‑94 (MQ=60)
TGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAA > SRR4302535.985799/1‑94 (MQ=60)
TGGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAA < SRR4302535.2365703/94‑1 (MQ=60)
GGACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAAC > SRR4302535.3718638/1‑94 (MQ=60)
GACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACG < SRR4302535.2412172/94‑1 (MQ=60)
GACGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACG < SRR4302535.2816936/94‑1 (MQ=60)
CGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGG < SRR4302535.810809/94‑1 (MQ=60)
CGCACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGG < SRR4302535.2749503/94‑1 (MQ=60)
ACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTT > SRR4302535.2058807/1‑94 (MQ=60)
ACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTT < SRR4302535.448461/94‑1 (MQ=60)
ACACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTT < SRR4302535.2630532/94‑1 (MQ=60)
CACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTA > SRR4302535.3431853/1‑94 (MQ=60)
ACGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTAT < SRR4302535.2398128/94‑1 (MQ=60)
CGTTCTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATC < SRR4302535.1539278/94‑1 (MQ=60)
CTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACT > SRR4302535.2841672/1‑94 (MQ=60)
CTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACT < SRR4302535.2612622/94‑1 (MQ=60)
CTATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACT > SRR4302535.882767/1‑94 (MQ=60)
TATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTG > SRR4302535.3566807/1‑94 (MQ=60)
TATTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTG > SRR4302535.1147969/1‑94 (MQ=60)
TTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCT < SRR4302535.1877203/94‑1 (MQ=60)
TTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCT < SRR4302535.4385989/94‑1 (MQ=60)
TTGGTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCT < SRR4302535.1158357/94‑1 (MQ=60)
GTCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGAT > SRR4302535.895209/1‑94 (MQ=60)
TCTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATT < SRR4302535.4296480/94‑1 (MQ=60)
CTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTG > SRR4302535.561953/1‑94 (MQ=60)
CTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTG < SRR4302535.1798918/94‑1 (MQ=60)
CTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTG < SRR4302535.2883085/94‑1 (MQ=60)
CTTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTG < SRR4302535.3615303/94‑1 (MQ=60)
TTGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGC < SRR4302535.1150083/94‑1 (MQ=60)
TGCGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCT > SRR4302535.1179881/1‑94 (MQ=60)
CGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCCTG < SRR4302535.2111273/94‑1 (MQ=60)
CGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCCTG < SRR4302535.158263/94‑1 (MQ=60)
CGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGCTATCAACTCCTGATTGCCTG > SRR4302535.2211112/1‑94 (MQ=60)
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AAAAGTCATGGCTGTGGTGCGTGAGCACAATTACCACCCGAACGCCGTGGCAGCTGGGCTTCGTGCTGGACGCACACGTTCTATTGGTCTTGTGATCCCCGATCTGGAGAACACCAGCTATACCCGCATCGCTAACTATCTTGAACGCCAGGCGCGGCAACGGGGTTATCAACTGCTGATTGCCTG > NC_000913/88135‑88320
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
