Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,203,930 |
T→C |
G72G (GGT→GGC) |
yehM → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,203,930 | 0 | T | C | 100.0%
| 384.1
/ NA
| 125 | G72G (GGT→GGC) | yehM | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (59/66); total (59/66) |
Only 100 of 146 total aligned reads displayed.
CCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGTGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTT > NC_000913/2203840‑2204019
|
ccGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGgcgc < 1:424703/93‑1 (MQ=255)
cGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGcc < 1:660051/93‑1 (MQ=255)
ggTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTg > 1:2694193/1‑93 (MQ=255)
ggTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTg < 2:3087796/93‑1 (MQ=255)
gTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTgg < 1:1018126/93‑1 (MQ=255)
tAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGa < 1:2015767/93‑1 (MQ=255)
gACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACg > 2:2169619/1‑93 (MQ=255)
cGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGcc > 1:4632088/1‑93 (MQ=255)
cGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGcc > 1:2676216/1‑93 (MQ=255)
cGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGcc > 2:3673528/1‑93 (MQ=255)
gAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCa > 1:3715159/1‑93 (MQ=255)
aaCTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCAt > 2:129534/1‑93 (MQ=255)
aaCTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTAATGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCAt > 2:384238/1‑93 (MQ=255)
cTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCAttt > 2:662252/1‑93 (MQ=255)
tGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTg > 1:1451150/1‑93 (MQ=255)
gTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGc < 2:1506070/93‑1 (MQ=255)
tttttAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCt > 2:459463/1‑93 (MQ=255)
tttttAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCt > 2:1230562/1‑93 (MQ=255)
tttttAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCt < 2:1869073/93‑1 (MQ=255)
tAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAAt < 2:3909047/93‑1 (MQ=255)
gCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAAttt > 2:4144337/1‑93 (MQ=255)
gCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAAttt < 1:2331631/93‑1 (MQ=255)
gCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAAttt > 2:4258109/1‑93 (MQ=255)
ccaccaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTc < 1:3374480/93‑1 (MQ=255)
ccaccaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTc < 2:1774263/93‑1 (MQ=255)
ccaccaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTc > 1:2945248/1‑93 (MQ=255)
ccaccaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTCGGCGCCCCTTTCTTAATTTTc > 2:48638/1‑93 (MQ=255)
caccaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCg < 1:2379316/93‑1 (MQ=255)
accaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGc > 2:4263858/1‑93 (MQ=255)
accaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGc < 1:628306/93‑1 (MQ=255)
ccaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGCAGGTGCAGCCCCCGGGCGTGGCGGCCGGGCGGCATCTGGTGAATTTTctcg > 2:43748/1‑90 (MQ=255)
ccaGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGcc > 2:1377959/1‑93 (MQ=255)
caGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTAGCCg > 2:2238066/1‑93 (MQ=255)
aGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCgg < 2:4388930/93‑1 (MQ=255)
gCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGa < 1:2490908/93‑1 (MQ=255)
cTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAg < 1:202825/93‑1 (MQ=255)
cTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAg < 2:1175597/93‑1 (MQ=255)
cTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAg < 1:922107/93‑1 (MQ=255)
ttCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGt > 2:3449064/1‑93 (MQ=255)
ttCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCCGAGt > 2:1860735/1‑93 (MQ=255)
tCCGGTAGCTATTTACAGGTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTTGCCGGAGTg < 1:1948200/93‑1 (MQ=255)
cGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGc < 2:2935737/93‑1 (MQ=255)
ggTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCa < 2:888238/93‑1 (MQ=255)
gTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAg < 1:3589674/93‑1 (MQ=255)
gTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCCGGGCGCCCTTTGCTGGATTTTTGTCGGGGTGGCAg > 2:2429881/1‑93 (MQ=255)
tAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCAATTGCTGAATTTTCGGCGGAGTGGCAgg > 1:102931/1‑93 (MQ=255)
cTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGgcgc > 2:1462825/1‑93 (MQ=255)
cTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGgcgc > 1:764359/1‑93 (MQ=255)
aTTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTa > 1:1389100/1‑93 (MQ=255)
tttACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCCGAATTTTCCCCGGACTGGCAGGGGCtgc > 1:1806682/1‑91 (MQ=255)
tACAGTTATTTCCAGTATCAGGACGGTGCAGCCCCCGGGCCTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACaa < 1:2582613/93‑1 (MQ=255)
tACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACaa < 1:183071/93‑1 (MQ=255)
cAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGc < 1:4439675/93‑1 (MQ=255)
aGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGcc < 2:3143783/93‑1 (MQ=255)
aGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGcc < 1:3637793/93‑1 (MQ=255)
aGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGcc < 1:2376995/93‑1 (MQ=255)
ttATTGCCAGTATCAGGACGGTGCAGCCCCCGTGCGGGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGc < 1:3135508/93‑1 (MQ=255)
ttATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGc < 2:2918246/93‑1 (MQ=255)
ttATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGGGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGACGc > 1:2330832/1‑93 (MQ=255)
aTTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCAc < 2:1547870/93‑1 (MQ=255)
gCCAGTATCAGGAGGGTGCAGCCCGCGGGCGTGGCTCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTc < 1:1129860/93‑1 (MQ=255)
gCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTc > 2:701350/1‑93 (MQ=255)
cAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAACCGCCCGTCGc > 1:2048973/1‑93 (MQ=255)
cAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCCACAAGCCCCACgggcg > 2:3628642/1‑89 (MQ=255)
aGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCCCTAAAAAGCGAACGTCGcc > 2:3472194/1‑92 (MQ=255)
gTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCAt < 2:3728524/93‑1 (MQ=255)
tCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCa < 1:1169172/93‑1 (MQ=255)
tCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCa > 2:2145110/1‑93 (MQ=255)
cAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAg < 1:3885621/93‑1 (MQ=255)
aGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGGCTACAAACCGCACGCCGCATTTAgg > 2:3535643/1‑93 (MQ=255)
ggACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCCTTCAGGc > 1:2278714/1‑93 (MQ=255)
ggACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAggg > 2:2192899/1‑92 (MQ=255)
ggACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGc < 1:3479637/93‑1 (MQ=255)
ggACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGc < 1:3317562/93‑1 (MQ=255)
gACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGGCTACAAACCGCACGTCGCATTCAGGca > 1:1319806/1‑93 (MQ=255)
ggTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACaa > 1:3066734/1‑93 (MQ=255)
gTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACaaa < 1:2463301/93‑1 (MQ=255)
tGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGGGTAGAAAGCCCACGTCGCATTTAGGCACCAac > 1:2725314/1‑93 (MQ=255)
cccccGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAacttact < 1:3495539/93‑1 (MQ=255)
ccccGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGGCTACAAGCCGCACGTCGCATTCAGGCACAAaattactt > 2:471414/1‑93 (MQ=255)
ccccGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAacttactt < 1:384317/93‑1 (MQ=255)
cccGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTc < 1:3194338/93‑1 (MQ=255)
ccGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCa < 2:3102022/93‑1 (MQ=255)
ccGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCa < 1:2276709/93‑1 (MQ=255)
ccGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCa < 1:4439181/93‑1 (MQ=255)
gggCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATc < 2:2521445/93‑1 (MQ=255)
gggCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATc < 2:2427944/93‑1 (MQ=255)
ggCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCg < 2:3543828/93‑1 (MQ=255)
ggCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCg > 1:4555449/1‑93 (MQ=255)
gCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGa < 2:3724168/93‑1 (MQ=255)
gCGTGGCCCCTGGACCGCCTTTGCTGAATTTTCGCCGGAGTGGCAGGCCCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGa < 1:859649/93‑1 (MQ=255)
cGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAt < 2:926174/93‑1 (MQ=255)
cGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAt < 2:4472448/93‑1 (MQ=255)
cGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAt < 1:1920832/93‑1 (MQ=255)
cGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAt < 1:4088803/93‑1 (MQ=255)
gtggcgCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAtt < 1:2554453/93‑1 (MQ=255)
gtggcgCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAtt < 1:2764364/93‑1 (MQ=255)
tggcgCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAttt < 1:2562628/93‑1 (MQ=255)
tggcgCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAttt < 2:2531092/93‑1 (MQ=255)
tggcgCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGAttt < 2:2248641/93‑1 (MQ=255)
|
CCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGTGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTT > NC_000913/2203840‑2204019
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGACCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGTGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTTGC > NC_000913/2203837‑2204021
|
TGACCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGC < SRR4302535.1187390/94‑1 (MQ=60)
TGACCGGGTAGACGAACTGTTTTGAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGC < SRR4302535.993514/94‑1 (MQ=60)
CCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCC < SRR4302535.427669/94‑1 (MQ=60)
CGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCT < SRR4302535.490947/94‑1 (MQ=60)
CGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCT < SRR4302535.664656/94‑1 (MQ=60)
GGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTG > SRR4302535.2713446/1‑94 (MQ=60)
GGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTG < SRR4302535.2354944/94‑1 (MQ=60)
GTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGA < SRR4302535.1025362/94‑1 (MQ=60)
TAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGAC < SRR4302535.2030290/94‑1 (MQ=60)
AGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACG > SRR4302535.2007775/1‑94 (MQ=60)
ACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCC > SRR4302535.4663517/1‑94 (MQ=60)
ACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCC > SRR4302535.2695364/1‑94 (MQ=60)
CGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCA > SRR4302535.3740896/1‑94 (MQ=60)
GAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCAT > SRR4302535.2510009/1‑94 (MQ=60)
CTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTG > SRR4302535.1461530/1‑94 (MQ=60)
GCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTT < SRR4302535.2348309/94‑1 (MQ=60)
CCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTC > SRR4302535.4505200/1‑94 (MQ=60)
CCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTC > SRR4302535.2965948/1‑94 (MQ=60)
CCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCG < SRR4302535.2069614/94‑1 (MQ=60)
CCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCG < SRR4302535.3397950/94‑1 (MQ=60)
CACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGC < SRR4302535.2903657/94‑1 (MQ=60)
CACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGC < SRR4302535.2396403/94‑1 (MQ=60)
ACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCC < SRR4302535.632684/94‑1 (MQ=60)
CCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCG < SRR4302535.3950599/94‑1 (MQ=60)
CAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGG < SRR4302535.2343246/94‑1 (MQ=60)
AGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGGCTGGACGCCATTTGCTGAATTTTCGCCCGA > SRR4302535.932735/1‑94 (MQ=60)
GCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAG < SRR4302535.2508877/94‑1 (MQ=60)
GCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAG > SRR4302535.1163311/1‑94 (MQ=60)
CTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGT < SRR4302535.204209/94‑1 (MQ=60)
CTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGT < SRR4302535.928643/94‑1 (MQ=60)
TTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTG < SRR4302535.2581588/94‑1 (MQ=60)
TCCGGTAGCTATTTACAGGTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTTGCCGGAGTGG < SRR4302535.1962225/94‑1 (MQ=60)
GGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAG > SRR4302535.716618/1‑94 (MQ=60)
GTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGG < SRR4302535.3614575/94‑1 (MQ=60)
GTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCAATTGCTGAATTTTCGGCGGAGTGGCAGG > SRR4302535.103659/1‑94 (MQ=60)
AGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGG > SRR4302535.2719772/1‑94 (MQ=60)
GCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGC > SRR4302535.769742/1‑94 (MQ=60)
CTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCT > SRR4302535.3537065/1‑94 (MQ=60)
TATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTA > SRR4302535.1399014/1‑94 (MQ=60)
ATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTAC > SRR4302535.1477761/1‑94 (MQ=60)
ATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCCGAATTTTCCCCGGACTGGCAGGGGCTGC > SRR4302535.1819735/1‑94 (MQ=60)
TTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAA > SRR4302535.324664/1‑94 (MQ=60)
TACAGTTATTTCCAGTATCAGGACGGTGCAGCCCCCGGGCCTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAG < SRR4302535.2601168/94‑1 (MQ=60)
TACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAG < SRR4302535.184334/94‑1 (MQ=60)
CAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCC < SRR4302535.4470109/94‑1 (MQ=60)
AGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCTCCGGAGTGGCAGGgggtaccaactc > SRR4302535.4084713/1‑82 (MQ=60)
AGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCG < SRR4302535.2394071/94‑1 (MQ=60)
AGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCG < SRR4302535.3662998/94‑1 (MQ=60)
GTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGGGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGACGC > SRR4302535.2347504/1‑94 (MQ=60)
TTATTGCCAGTATCAGGACGGTGCAGCCCCCGTGCGGGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCA < SRR4302535.3157334/94‑1 (MQ=60)
GCCAGTATCAGGAGGGTGCAGCCCGCGGGCGTGGCTCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCG < SRR4302535.1137926/94‑1 (MQ=60)
CCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAACCGCCCGTCGC > SRR4302535.2063723/1‑94 (MQ=60)
TCAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAG < SRR4302535.1177520/94‑1 (MQ=60)
CAGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGG < SRR4302535.3912273/94‑1 (MQ=60)
AGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGGCTACAAGCCGCACGTCGCATTCAGGC > SRR4302535.312235/1‑94 (MQ=60)
AGGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCCTTCAGGC > SRR4302535.2294988/1‑94 (MQ=60)
GGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGGCTTCAAAGCGCACGGCGCATTCAGGCA > SRR4302535.1329237/1‑94 (MQ=60)
GGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGGCTACAAACCGCACGTCGCATTCAGGCA > SRR4302535.1329236/1‑94 (MQ=60)
GGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCA < SRR4302535.3503810/94‑1 (MQ=60)
GGACGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCA < SRR4302535.3340646/94‑1 (MQ=60)
CGGTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAA > SRR4302535.3088163/1‑94 (MQ=60)
GTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGgggtagaaagcccacgtcgcatttaggcaccaac > SRR4302535.2744781/1‑60 (MQ=60)
GTGCAGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAAC < SRR4302535.2481061/94‑1 (MQ=60)
AGCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGGGCTACCAGCCGCACGTCGCATTCCGGCCCAAACTTAC > SRR4302535.3830233/1‑94 (MQ=60)
GCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACT < SRR4302535.4379770/94‑1 (MQ=60)
GCCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCCGAGTGGCAGGCGCTCCAAGCCCCACGTgccactcaggcccaaaactact > SRR4302535.1908290/1‑72 (MQ=60)
CCCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTT < SRR4302535.3519826/94‑1 (MQ=60)
CCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCATGTCGCATTCAGGCACAAACTTACTTC < SRR4302535.3489066/94‑1 (MQ=60)
CCCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTC < SRR4302535.386982/94‑1 (MQ=60)
CCCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCA < SRR4302535.3216437/94‑1 (MQ=60)
CCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCAT < SRR4302535.2292966/94‑1 (MQ=60)
CCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCAT < SRR4302535.4469609/94‑1 (MQ=60)
CCGGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCAT < SRR4302535.2401474/94‑1 (MQ=60)
GGGCGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCG > SRR4302535.4586563/1‑94 (MQ=60)
CGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATT < SRR4302535.1934677/94‑1 (MQ=60)
CGTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATT < SRR4302535.4116781/94‑1 (MQ=60)
GTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTT < SRR4302535.2784056/94‑1 (MQ=60)
GTGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTT < SRR4302535.2572847/94‑1 (MQ=60)
TGGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTTG < SRR4302535.2581074/94‑1 (MQ=60)
GGCGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTTGC < SRR4302535.3778025/94‑1 (MQ=60)
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TGACCGGGTAGACGAACTGTTTTTAGCCCACCAGCTTCCGGTAGCTATTTACAGTTATTGCCAGTATCAGGACGGTGCAGCCCCCGGGCGTGGTGCCTGGACGCCATTTGCTGAATTTTCGCCGGAGTGGCAGGCGCTACAAGCCGCACGTCGCATTCAGGCACAAACTTACTTCATCGATTTGC > NC_000913/2203837‑2204021
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
