Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,210,781 |
T→C |
M68V (ATG→GTG) |
b2125 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,210,781 | 0 | T | C | 99.3%
| 432.5
/ ‑4.8
| 139 | M68V (ATG→GTG) | b2125 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (80/58); total (81/58) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.05e-01 |
Only 100 of 144 total aligned reads displayed.
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC > NC_000913/2210692‑2210868
|
aTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAcccc < 1:4570129/93‑1 (MQ=255)
aTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAcccc < 1:853212/93‑1 (MQ=255)
aTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAcccc > 1:2138742/1‑93 (MQ=255)
tCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACcccc > 1:4404055/1‑93 (MQ=255)
cAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCcca > 2:58580/1‑93 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc > 1:1295409/1‑93 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc > 2:1629091/1‑93 (MQ=255)
aGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacca < 1:579756/93‑1 (MQ=255)
aGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacca > 1:167756/1‑93 (MQ=255)
ggCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAt > 1:749502/1‑93 (MQ=255)
ggCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAt > 2:3276938/1‑93 (MQ=255)
cATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAttt > 1:1386996/1‑93 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc > 1:4019680/1‑93 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc > 2:19332/1‑93 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc > 2:2198890/1‑93 (MQ=255)
gTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCa > 2:629315/1‑93 (MQ=255)
gTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCa < 2:2581352/93‑1 (MQ=255)
ttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAcc > 1:191186/1‑93 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt > 2:528422/1‑93 (MQ=255)
aaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTg > 2:1434720/1‑93 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa > 1:2241917/1‑93 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa > 1:2116203/1‑93 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa < 1:3737379/93‑1 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa < 1:2907215/93‑1 (MQ=255)
aGGCTGTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCCCCCCCACCATTTCCAGACCACTGa < 2:2267545/93‑1 (MQ=255)
ggCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGAt > 1:1394727/1‑93 (MQ=255)
ggCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAt < 1:2409305/93‑1 (MQ=255)
ggCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAt > 2:4676621/1‑93 (MQ=255)
agCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAt < 2:3773983/92‑1 (MQ=255)
gCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATg < 2:3555209/93‑1 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc < 1:2271034/93‑1 (MQ=255)
tttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcg < 2:1001688/93‑1 (MQ=255)
ttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcgc < 1:2784991/93‑1 (MQ=255)
ttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcgc > 2:1743701/1‑93 (MQ=255)
tAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGcgcg > 2:1328966/1‑93 (MQ=255)
aaTTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCgg > 1:1426321/1‑93 (MQ=255)
aTTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGc > 1:4449829/1‑93 (MQ=255)
ttGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCa < 1:1506228/93‑1 (MQ=255)
ttGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCa > 1:678527/1‑93 (MQ=255)
gCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATc < 1:68993/93‑1 (MQ=255)
gCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATc < 2:3846574/93‑1 (MQ=255)
gTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTg > 1:125539/1‑93 (MQ=255)
gTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTg > 1:3580002/1‑93 (MQ=255)
gTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTg < 1:1592695/93‑1 (MQ=255)
aTTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGa > 1:3321113/1‑93 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat > 2:1266919/1‑93 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat > 1:3002173/1‑93 (MQ=255)
tCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGata < 2:929045/93‑1 (MQ=255)
cAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCga < 1:3440658/93‑1 (MQ=255)
cAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCga < 1:926290/93‑1 (MQ=255)
aCGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGGTGCGCGGCATCGGGATATCGAGaa > 2:2035587/1‑93 (MQ=255)
cGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGaaa < 2:4386475/93‑1 (MQ=255)
cGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGaaa < 1:1695914/93‑1 (MQ=255)
cGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGaaa > 1:983196/1‑93 (MQ=255)
agCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCCCTGATGCGCGGCATCTGGATATCGAGaaa < 1:4166050/92‑1 (MQ=255)
gCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAAc > 2:1532180/1‑93 (MQ=255)
aGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAg > 2:2442008/1‑93 (MQ=255)
aGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAg < 1:1897636/93‑1 (MQ=255)
gTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGc > 2:1074285/1‑93 (MQ=255)
tGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGca > 1:582832/1‑93 (MQ=255)
tGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGca < 1:611697/93‑1 (MQ=255)
agaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcaca < 1:3782276/93‑1 (MQ=255)
agaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcaca < 1:4156774/93‑1 (MQ=255)
gaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAt > 2:254447/1‑93 (MQ=255)
gaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAt > 2:3591986/1‑93 (MQ=255)
gaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAt > 1:2987408/1‑93 (MQ=255)
aaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATcc > 1:4064752/1‑93 (MQ=255)
aaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCgg > 2:3134942/1‑93 (MQ=255)
aaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCgg < 2:4323483/93‑1 (MQ=255)
aCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCggg > 2:1223576/1‑93 (MQ=255)
aCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCggg > 2:159339/1‑93 (MQ=255)
cAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgc > 1:4597177/1‑93 (MQ=255)
tataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCTGGCGCa > 1:1196137/1‑93 (MQ=255)
tataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCa > 2:882364/1‑93 (MQ=255)
tataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCa < 1:3504469/93‑1 (MQ=255)
ataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAg > 2:1131889/1‑93 (MQ=255)
cGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGttt > 2:4525469/1‑93 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa < 2:3293326/93‑1 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa < 1:1280859/93‑1 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACAGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa < 2:3293452/93‑1 (MQ=255)
ggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAt < 2:1175389/93‑1 (MQ=255)
cGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGc > 1:3689634/1‑93 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa < 1:3828849/93‑1 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa < 1:306419/93‑1 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa > 2:2851263/1‑93 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa > 2:115200/1‑93 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa > 2:1293203/1‑93 (MQ=255)
aTGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAc > 1:3576730/1‑93 (MQ=255)
aTGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAc > 2:4177359/1‑93 (MQ=255)
tGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAcc < 1:1591638/93‑1 (MQ=255)
ttCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACcgc > 1:1348449/1‑93 (MQ=255)
ttCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACcgc < 1:2777299/93‑1 (MQ=255)
gggTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATACGGGCGCAGTTTATGCACCGCGCCg > 1:1514579/1‑93 (MQ=255)
ggTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGa < 2:4064731/93‑1 (MQ=255)
gTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAt > 1:3274967/1‑93 (MQ=255)
gTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAt < 1:1991292/93‑1 (MQ=255)
cAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATcc < 1:1557111/93‑1 (MQ=255)
cAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATcc < 1:4088617/93‑1 (MQ=255)
aaGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATccc < 1:1458373/93‑1 (MQ=255)
aaGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATccc < 1:2452194/93‑1 (MQ=255)
|
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC > NC_000913/2210692‑2210868
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > NC_000913/2210688‑2210874
|
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCTGGGTCAAGCAC > SRR4302535.305272/1‑94 (MQ=60)
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAC > SRR4302535.2172011/1‑94 (MQ=60)
ATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACC > SRR4302535.2314292/1‑94 (MQ=60)
ATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATACGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACC > SRR4302535.612830/1‑94 (MQ=60)
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCC > SRR4302535.1380475/1‑94 (MQ=60)
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCC > SRR4302535.2154144/1‑94 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCC < SRR4302535.859220/94‑1 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCC > SRR4302535.4434192/1‑94 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCC < SRR4302535.4601293/94‑1 (MQ=60)
AAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACC > SRR4302535.1304649/1‑94 (MQ=60)
AAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCA > SRR4302535.168920/1‑94 (MQ=60)
AGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAT > SRR4302535.754781/1‑94 (MQ=60)
AGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAT < SRR4302535.583832/94‑1 (MQ=60)
GCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTT > SRR4302535.1396895/1‑94 (MQ=60)
ATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCC > SRR4302535.910372/1‑94 (MQ=60)
ATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCC > SRR4302535.4047184/1‑94 (MQ=60)
ATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCC < SRR4302535.1651461/94‑1 (MQ=60)
TTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGA > SRR4302535.3025603/1‑94 (MQ=60)
TTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGA > SRR4302535.1299924/1‑94 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC > SRR4302535.192508/1‑94 (MQ=60)
AAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGA > SRR4302535.2257866/1‑94 (MQ=60)
AAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGA > SRR4302535.2131473/1‑94 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGAT > SRR4302535.1404687/1‑94 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT < SRR4302535.2927763/94‑1 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT > SRR4302535.743567/1‑94 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT < SRR4302535.3763244/94‑1 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT > SRR4302535.440750/1‑94 (MQ=60)
GGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATG < SRR4302535.2426651/94‑1 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC > SRR4302535.2582912/1‑94 (MQ=60)
CTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCG < SRR4302535.2287226/94‑1 (MQ=60)
TTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCG < SRR4302535.2804809/94‑1 (MQ=60)
TAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGG > SRR4302535.1436500/1‑94 (MQ=60)
AATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGC > SRR4302535.4166780/1‑94 (MQ=60)
AATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGC > SRR4302535.4480350/1‑94 (MQ=60)
ATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCA > SRR4302535.683273/1‑94 (MQ=60)
TTGCGTATTCGTCAAACGCAGTGAGAAAATCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAT < SRR4302535.1517059/94‑1 (MQ=60)
TTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAT < SRR4302535.2189742/94‑1 (MQ=60)
TTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAT < SRR4302535.1517058/94‑1 (MQ=60)
GCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCT < SRR4302535.69500/94‑1 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG > SRR4302535.3604814/1‑94 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG > SRR4302535.126421/1‑94 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG > SRR4302535.1422628/1‑94 (MQ=60)
GTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGG > SRR4302535.30002/1‑94 (MQ=60)
GTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGG < SRR4302535.1604190/94‑1 (MQ=60)
TATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGA > SRR4302535.3344222/1‑94 (MQ=60)
ATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCACGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGAT < SRR4302535.3327440/94‑1 (MQ=60)
ATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGAT > SRR4302535.3023217/1‑94 (MQ=60)
CGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATC > SRR4302535.3768031/1‑94 (MQ=60)
CGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATC > SRR4302535.3532213/1‑94 (MQ=60)
CAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAG < SRR4302535.932851/94‑1 (MQ=60)
CAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAG < SRR4302535.3464586/94‑1 (MQ=60)
ACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAA > SRR4302535.990180/1‑94 (MQ=60)
CGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAAC < SRR4302535.1708171/94‑1 (MQ=60)
AGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCCCTGATGCGCGGCATCTGGATATCGAGAAAC < SRR4302535.4194576/94‑1 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG < SRR4302535.489776/94‑1 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG < SRR4302535.1758738/94‑1 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC < SRR4302535.1911287/94‑1 (MQ=60)
GTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCA > SRR4302535.586920/1‑94 (MQ=60)
TGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCAC < SRR4302535.615955/94‑1 (MQ=60)
AGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAT < SRR4302535.4185228/94‑1 (MQ=60)
AGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAT > SRR4302535.3008357/1‑94 (MQ=60)
AGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAT < SRR4302535.3808372/94‑1 (MQ=60)
AAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCC > SRR4302535.3901804/1‑94 (MQ=60)
AAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCC > SRR4302535.4092567/1‑94 (MQ=60)
ACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGC > SRR4302535.4628452/1‑94 (MQ=60)
CAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCG < SRR4302535.4509944/94‑1 (MQ=60)
AATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGC > SRR4302535.2084951/1‑94 (MQ=60)
ATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCTGGCGCA > SRR4302535.1204707/1‑94 (MQ=60)
TATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAG > SRR4302535.647969/1‑94 (MQ=60)
TATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAG < SRR4302535.3528822/94‑1 (MQ=60)
GGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAT < SRR4302535.1290001/94‑1 (MQ=60)
GCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGC > SRR4302535.3715173/1‑94 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC < SRR4302535.308539/94‑1 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC < SRR4302535.3855258/94‑1 (MQ=60)
GATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAC > SRR4302535.3601527/1‑94 (MQ=60)
TGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCG < SRR4302535.1603122/94‑1 (MQ=60)
GTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGC > SRR4302535.1358080/1‑94 (MQ=60)
TTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCG < SRR4302535.2797071/94‑1 (MQ=60)
CGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATACGGGCGCAGTTTATGCACCGCGCCG > SRR4302535.1525488/1‑94 (MQ=60)
GGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAT < SRR4302535.3712608/94‑1 (MQ=60)
GGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAT > SRR4302535.3297712/1‑94 (MQ=60)
GTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATC < SRR4302535.2005630/94‑1 (MQ=60)
TCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCC < SRR4302535.1589889/94‑1 (MQ=60)
TCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCC < SRR4302535.2313065/94‑1 (MQ=60)
CAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC < SRR4302535.1568337/94‑1 (MQ=60)
CAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC < SRR4302535.4116593/94‑1 (MQ=60)
AAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCT < SRR4302535.1468811/94‑1 (MQ=60)
AAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCT < SRR4302535.2469868/94‑1 (MQ=60)
CCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC < SRR4302535.3624210/94‑1 (MQ=60)
CCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC < SRR4302535.3956042/94‑1 (MQ=60)
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GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > NC_000913/2210688‑2210874
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
