Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,210,781 |
T→C |
M68V (ATG→GTG) |
b2125 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,210,781 | 0 | T | C | 99.6%
| 700.8
/ ‑5.3
| 222 | M68V (ATG→GTG) | b2125 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (124/96); total (125/97) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 |
Only 100 of 235 total aligned reads displayed.
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTT > NC_000913/2210691‑2210870
|
aaTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAccc < 2:1425393/93‑1 (MQ=255)
aaTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAccc > 2:7131076/1‑93 (MQ=255)
aTCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAcccc < 1:1251210/93‑1 (MQ=255)
tCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACcccc > 2:2814212/1‑93 (MQ=255)
tCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGGAAAGCACcccc > 1:1655937/1‑93 (MQ=255)
cAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCcca > 1:1094102/1‑93 (MQ=255)
cAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCcca > 1:1483616/1‑93 (MQ=255)
cAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCcca < 2:4105373/93‑1 (MQ=255)
aaaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccac < 2:3918993/93‑1 (MQ=255)
aaaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccac > 1:3313558/1‑93 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc > 2:756136/1‑93 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc > 1:3660850/1‑93 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc < 1:3475552/93‑1 (MQ=255)
aaGGCATGTTCTTCAAAGGCTTAAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCccacc > 2:4981722/1‑93 (MQ=255)
ggCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAt > 2:2424355/1‑93 (MQ=255)
ggCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAt > 2:2175893/1‑93 (MQ=255)
cATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAttt < 1:6617050/93‑1 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc < 1:5500555/93‑1 (MQ=255)
tGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTcc > 1:4179698/1‑93 (MQ=255)
ttcttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAg < 2:4791268/93‑1 (MQ=255)
ttcttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAg > 2:1074532/1‑93 (MQ=255)
tcttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGa < 1:5735253/93‑1 (MQ=255)
ttcAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAcc > 1:1330003/1‑93 (MQ=255)
cAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCAc < 2:3741654/93‑1 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt > 2:6025571/1‑93 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt > 1:257951/1‑93 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt > 1:4732910/1‑93 (MQ=255)
aaaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACt < 1:5956756/93‑1 (MQ=255)
aaGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTg < 2:4646861/93‑1 (MQ=255)
aGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGa > 1:2809129/1‑93 (MQ=255)
ggCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAt < 1:6801696/93‑1 (MQ=255)
gCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATg < 2:7898567/93‑1 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc > 1:952275/1‑93 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc > 1:6531574/1‑93 (MQ=255)
cTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgc > 2:618963/1‑93 (MQ=255)
tttAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATgcg > 2:4439557/1‑93 (MQ=255)
aaTTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCgg > 1:3957946/1‑93 (MQ=255)
ttacGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCa < 2:1854501/90‑1 (MQ=255)
ttGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCGCCACCATTTCCAGACCACTGATGCGCGGct > 1:4504260/1‑92 (MQ=255)
tGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAt > 2:2128854/1‑93 (MQ=255)
gCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATc > 1:6407104/1‑93 (MQ=255)
gCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATc < 1:3071818/93‑1 (MQ=255)
cGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCTCCCCCACCATTTCCAGACCACTGATGCGCGGCATCt < 2:557649/93‑1 (MQ=255)
gTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTg > 2:2608959/1‑93 (MQ=255)
gTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTg < 2:7473584/93‑1 (MQ=255)
tATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCGAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTgg > 1:3839399/1‑93 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCCCCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat < 1:5128758/93‑1 (MQ=255)
ttCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGat > 2:676453/1‑93 (MQ=255)
tCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGata < 2:3442024/93‑1 (MQ=255)
cGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGatat < 2:5836909/93‑1 (MQ=255)
gTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGatata > 2:2555061/1‑92 (MQ=255)
gTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATc > 2:5364313/1‑93 (MQ=255)
gTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATc < 2:309175/93‑1 (MQ=255)
tCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCg > 1:950438/1‑93 (MQ=255)
tCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCg < 1:1315402/93‑1 (MQ=255)
cAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCga < 1:5988505/93‑1 (MQ=255)
cGCAGTGATAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGaaa < 2:4501068/93‑1 (MQ=255)
cGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGaaa > 1:3568805/1‑93 (MQ=255)
cAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACa < 2:7188742/93‑1 (MQ=255)
aGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAg < 1:6800373/93‑1 (MQ=255)
gTGAGAAAAACAATATACGGGCGATGTTCCGGGGCAAGCACGCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGc > 1:7679353/1‑93 (MQ=255)
tGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGCTGCGCGGCATCTGGATATCGAGAAACAGca > 2:4060581/1‑93 (MQ=255)
tGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGca < 1:1116135/93‑1 (MQ=255)
tGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGca > 2:2860186/1‑93 (MQ=255)
gagaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcac < 1:5921887/93‑1 (MQ=255)
gagaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcac > 2:3468728/1‑93 (MQ=255)
agaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcaca < 2:7279483/93‑1 (MQ=255)
agaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcaca < 2:5022122/93‑1 (MQ=255)
gaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcacac > 1:6092700/1‑92 (MQ=255)
gaAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAt > 1:1350110/1‑93 (MQ=255)
gaAAAACAATATACGGGCGATGTTCCGGGTAAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGcacac > 1:3711601/1‑92 (MQ=255)
aaaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATc < 2:1675722/93‑1 (MQ=255)
aaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATcc > 2:4201174/1‑93 (MQ=255)
aaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATcc > 1:7848630/1‑93 (MQ=255)
aaaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATcc < 1:5714853/93‑1 (MQ=255)
aaaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCg < 1:4363705/93‑1 (MQ=255)
aaCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCgg > 1:2376438/1‑93 (MQ=255)
aCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCggg < 1:2276694/93‑1 (MQ=255)
aCAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCggg > 1:4570294/1‑93 (MQ=255)
cAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgc > 2:1555937/1‑93 (MQ=255)
cAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgc > 2:7780389/1‑93 (MQ=255)
aaTATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGgcg > 2:6663186/1‑93 (MQ=255)
ataCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAg > 1:5346835/1‑93 (MQ=255)
taCGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGt < 2:6427319/93‑1 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa < 2:7683987/93‑1 (MQ=255)
gggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTa < 1:235606/93‑1 (MQ=255)
ggCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAt < 2:5926430/93‑1 (MQ=255)
cGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGc > 1:7207377/1‑93 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa > 2:4332691/1‑93 (MQ=255)
gATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCa > 1:4914962/1‑93 (MQ=255)
aTGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCAc < 1:527735/93‑1 (MQ=255)
ccGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCgcgc > 1:6881046/1‑93 (MQ=255)
ccGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCgcgc < 2:5293231/93‑1 (MQ=255)
gggTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCg > 1:4818160/1‑93 (MQ=255)
gTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGAt > 2:6124856/1‑93 (MQ=255)
cAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATcc < 1:5664188/93‑1 (MQ=255)
cAAGCAACCCCACCATTTCCAGTCCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATcc < 2:5148134/93‑1 (MQ=255)
aaGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATccc > 1:1529960/1‑93 (MQ=255)
aGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCt > 2:1826087/1‑93 (MQ=255)
gCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCtt > 1:7557198/1‑93 (MQ=255)
|
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTT > NC_000913/2210691‑2210870
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > NC_000913/2210688‑2210874
|
GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAC > SRR4302543.3309840/1‑94 (MQ=60)
AATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCC > SRR4302543.7840473/1‑94 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCC < SRR4302543.6467800/94‑1 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCC < SRR4302543.1262430/94‑1 (MQ=60)
ATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGGAAAGCACCCCC > SRR4302543.1670763/1‑94 (MQ=60)
TCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCA > SRR4302543.1496976/1‑94 (MQ=60)
TCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCA > SRR4302543.1103941/1‑94 (MQ=60)
CAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCAC > SRR4302543.3957727/1‑94 (MQ=60)
CAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCAC > SRR4302543.3343469/1‑94 (MQ=60)
AAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACC > SRR4302543.3693000/1‑94 (MQ=60)
AAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACC > SRR4302543.3605352/1‑94 (MQ=60)
AAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCA < SRR4302543.3506681/94‑1 (MQ=60)
AGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCAT < SRR4302543.4591629/94‑1 (MQ=60)
AGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCAACCCCACCAT < SRR4302543.1543269/94‑1 (MQ=60)
CATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTC < SRR4302543.6679443/94‑1 (MQ=60)
CATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTC > SRR4302543.7780152/1‑94 (MQ=60)
ATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCC > SRR4302543.4217570/1‑94 (MQ=60)
TGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCA > SRR4302543.6694794/1‑94 (MQ=60)
TGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCA < SRR4302543.5550469/94‑1 (MQ=60)
TGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCA < SRR4302543.5550470/94‑1 (MQ=60)
GTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAG < SRR4302543.5775495/94‑1 (MQ=60)
TCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAACAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGAC > SRR4302543.3760558/1‑94 (MQ=60)
TCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAC > SRR4302543.2301146/1‑94 (MQ=60)
TCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGAC < SRR4302543.5787569/94‑1 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC > SRR4302543.1341859/1‑94 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC > SRR4302543.1341860/1‑94 (MQ=60)
CTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACC > SRR4302543.4908626/1‑94 (MQ=60)
TTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCA > SRR4302543.6059146/1‑94 (MQ=60)
TTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCA < SRR4302543.423056/94‑1 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT > SRR4302543.260206/1‑94 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT > SRR4302543.4776161/1‑94 (MQ=60)
CAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACT > SRR4302543.3189154/1‑94 (MQ=60)
AAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTG > SRR4302543.1494022/1‑94 (MQ=60)
AAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTG < SRR4302543.6011279/94‑1 (MQ=60)
AAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGA > SRR4302543.2834842/1‑94 (MQ=60)
AGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGAT < SRR4302543.4541473/94‑1 (MQ=60)
GGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATG < SRR4302543.6865920/94‑1 (MQ=60)
GGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATG < SRR4302543.6865921/94‑1 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC > SRR4302543.960596/1‑94 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC > SRR4302543.6593064/1‑94 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC > SRR4302543.960595/1‑94 (MQ=60)
GCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGC > SRR4302543.5046726/1‑94 (MQ=60)
TTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGC < SRR4302543.5448812/94‑1 (MQ=60)
TTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCG > SRR4302543.7246662/1‑94 (MQ=60)
TAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGG > SRR4302543.3992982/1‑94 (MQ=60)
AATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGC > SRR4302543.1722990/1‑94 (MQ=60)
ATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCGCCACCATTTCCAGACCACTGATGCGCGGCT > SRR4302543.4545211/1‑94 (MQ=60)
TTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCAT > SRR4302543.5765405/1‑94 (MQ=60)
TGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCCCCCCCACCATTTCCAGACCACTGATGCGCGGCATC < SRR4302543.1343419/94‑1 (MQ=60)
TGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATC < SRR4302543.2460199/94‑1 (MQ=60)
TGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATC > SRR4302543.6467446/1‑94 (MQ=60)
GCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCT < SRR4302543.3099447/94‑1 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG > SRR4302543.4700416/1‑94 (MQ=60)
CGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTG > SRR4302543.524719/1‑94 (MQ=60)
GTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCGAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGG > SRR4302543.3873285/1‑94 (MQ=60)
GTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGG > SRR4302543.1114521/1‑94 (MQ=60)
ATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGTAT > SRR4302543.7373146/1‑94 (MQ=60)
ATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGAT > SRR4302543.6900184/1‑94 (MQ=60)
TTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCCCCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATA < SRR4302543.5175113/94‑1 (MQ=60)
TCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATAT < SRR4302543.5769506/94‑1 (MQ=60)
GTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCG > SRR4302543.27531/1‑94 (MQ=60)
GTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCG > SRR4302543.958744/1‑94 (MQ=60)
GTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCG > SRR4302543.3081916/1‑94 (MQ=60)
GTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCG > SRR4302543.877652/1‑94 (MQ=60)
TCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGA < SRR4302543.1327094/94‑1 (MQ=60)
CAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAG > SRR4302543.1174684/1‑94 (MQ=60)
CAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAG < SRR4302543.6043383/94‑1 (MQ=60)
CAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAG < SRR4302543.6043384/94‑1 (MQ=60)
CAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAG < SRR4302543.1318215/94‑1 (MQ=60)
CAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGGCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCACCTGGATATCGAG > SRR4302543.37068/1‑94 (MQ=60)
ACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAA > SRR4302543.3600363/1‑94 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG < SRR4302543.3243117/94‑1 (MQ=60)
CAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAG > SRR4302543.5448055/1‑94 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC < SRR4302543.666932/94‑1 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC > SRR4302543.2387032/1‑94 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC < SRR4302543.6864587/94‑1 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC > SRR4302543.5942894/1‑94 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC < SRR4302543.1300152/94‑1 (MQ=60)
AGTGAGAAAAACAATATACGGGCGATGTTCCGGGGCAAGCACGCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGC > SRR4302543.7752097/1‑94 (MQ=60)
TGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCAC > SRR4302543.335621/1‑94 (MQ=60)
TGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCAC < SRR4302543.1126237/94‑1 (MQ=60)
TGAGAAAAACAATAGACGGGCGATGTTCCGGGTCAACCGCCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCAC < SRR4302543.2526008/94‑1 (MQ=60)
GAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACA < SRR4302543.5975996/94‑1 (MQ=60)
AGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAT > SRR4302543.1362192/1‑94 (MQ=60)
AGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAC > SRR4302543.6150442/1‑94 (MQ=60)
AGAAAAACAATATACGGGCGATGTTCCGGGTAAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACAC > SRR4302543.3744237/1‑94 (MQ=60)
GAAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATC > SRR4302543.3616832/1‑94 (MQ=60)
AAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCC > SRR4302543.6177555/1‑94 (MQ=60)
AAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCC > SRR4302543.7922593/1‑94 (MQ=60)
AAAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCC > SRR4302543.3580889/1‑94 (MQ=60)
AAAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCG < SRR4302543.5766994/94‑1 (MQ=60)
AAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGG < SRR4302543.4403234/94‑1 (MQ=60)
AAACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGG > SRR4302543.2397965/1‑94 (MQ=60)
AACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGG > SRR4302543.4611857/1‑94 (MQ=60)
ACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGC < SRR4302543.2297520/94‑1 (MQ=60)
ACAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGC < SRR4302543.4261150/94‑1 (MQ=60)
CAATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCG > SRR4302543.1636378/1‑94 (MQ=60)
AATATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGC > SRR4302543.5087245/1‑94 (MQ=60)
TATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAG > SRR4302543.5395219/1‑94 (MQ=60)
TATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAG > SRR4302543.5395218/1‑94 (MQ=60)
TATACGGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAG < SRR4302543.635688/94‑1 (MQ=60)
GGGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTAT < SRR4302543.237641/94‑1 (MQ=60)
GGCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATG < SRR4302543.7730883/94‑1 (MQ=60)
GCGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGC > SRR4302543.7277251/1‑94 (MQ=60)
CGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCA > SRR4302543.6009293/1‑94 (MQ=60)
CGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCA > SRR4302543.7106327/1‑94 (MQ=60)
CGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCA > SRR4302543.4959747/1‑94 (MQ=60)
CGATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCA > SRR4302543.1430589/1‑94 (MQ=60)
ATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACC > SRR4302543.40643/1‑94 (MQ=60)
ATGTTCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACC < SRR4302543.532617/94‑1 (MQ=60)
TCCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGC > SRR4302543.6945793/1‑94 (MQ=60)
CCGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCC > SRR4302543.4661987/1‑94 (MQ=60)
CGGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCG > SRR4302543.4862156/1‑94 (MQ=60)
GGGTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGA > SRR4302543.3745991/1‑94 (MQ=60)
GTCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATC < SRR4302543.6680545/94‑1 (MQ=60)
TCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCC < SRR4302543.2023674/94‑1 (MQ=60)
TCAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCC < SRR4302543.6026842/94‑1 (MQ=60)
CAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC > SRR4302543.1543678/1‑94 (MQ=60)
CAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC < SRR4302543.4787101/94‑1 (MQ=60)
CAAGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCC < SRR4302543.5715855/94‑1 (MQ=60)
AGCACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTT > SRR4302543.7629151/1‑94 (MQ=60)
CACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCC > SRR4302543.6114631/1‑94 (MQ=60)
ACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCA > SRR4302543.3138996/1‑94 (MQ=60)
ACCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCA > SRR4302543.4758433/1‑94 (MQ=60)
CCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC < SRR4302543.269733/94‑1 (MQ=60)
CCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC < SRR4302543.6141070/94‑1 (MQ=60)
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GATAATCAAAGGCATGTTCTTCAAAGGCTTTAATTGCGTATTCGTCAAACGCAGTGAGAAAAACAATATACGGGCGATGTTCCGGGTCAAGCATCCCCACCATTTCCAGACCACTGATGCGCGGCATCTGGATATCGAGAAACAGCACATCCGGGCGCAGTTTATGCACCGCGCCGATCCCTTCCAC > NC_000913/2210688‑2210874
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
