Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,947,355 |
T→C |
M31T (ATG→ACG) |
argA → |
N‑acetylglutamate synthase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,947,355 | 0 | T | C | 100.0%
| 567.3
/ NA
| 177 | M31T (ATG→ACG) | argA | N‑acetylglutamate synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (84/93); total (84/93) |
Only 100 of 181 total aligned reads displayed.
TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG > NC_000913/2947265‑2947444
|
tGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGc > 2:3790777/1‑93 (MQ=255)
tGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGc < 2:4345491/93‑1 (MQ=255)
gggTAAAGAAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGc < 2:1721937/92‑1 (MQ=255)
gTAAAGGAACGTAAAACCGAGTTGGTCGTGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTc < 1:616893/93‑1 (MQ=255)
tAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAACACGTTTGTCATCACGCTcg > 2:2127464/1‑93 (MQ=255)
tAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcg > 2:416885/1‑93 (MQ=255)
tAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcg > 2:3500757/1‑93 (MQ=255)
tAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcg > 1:1524776/1‑93 (MQ=255)
ggAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcggcgg > 1:2608793/1‑93 (MQ=255)
aCGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGa > 2:395496/1‑93 (MQ=255)
cGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGaa < 2:663480/93‑1 (MQ=255)
cGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGaa > 2:2696828/1‑93 (MQ=255)
cGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGaa < 1:2855895/93‑1 (MQ=255)
gTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAg > 1:432158/1‑93 (MQ=255)
tAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGc > 2:2622478/1‑93 (MQ=255)
aaaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCa < 2:3037736/93‑1 (MQ=255)
aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAt < 1:3534483/93‑1 (MQ=255)
aaCCGAGTTGGGCGAGGAATTCCGCCATTCGTTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAt < 1:3534482/93‑1 (MQ=255)
aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAtt < 1:449189/93‑1 (MQ=255)
aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCAACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAtt < 2:1340650/93‑1 (MQ=255)
ccGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTg < 2:145091/93‑1 (MQ=255)
cGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGa > 2:1929933/1‑93 (MQ=255)
aGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGc > 2:2592766/1‑93 (MQ=255)
aGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGc < 1:1363132/93‑1 (MQ=255)
ttGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAt < 1:1524896/93‑1 (MQ=255)
tGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATg < 2:3943249/93‑1 (MQ=255)
tCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATgaga > 1:1865711/1‑93 (MQ=255)
tCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATgaga > 2:164336/1‑93 (MQ=255)
cGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGaa > 2:2405817/1‑93 (MQ=255)
gAGGGATTCCGCCATTTGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAt > 2:3522112/1‑93 (MQ=255)
gggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAttt > 2:3314977/1‑93 (MQ=255)
gggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAttt < 1:1110650/93‑1 (MQ=255)
ggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtc < 1:708064/93‑1 (MQ=255)
aTTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtctc < 2:46172/93‑1 (MQ=255)
ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGTATGAGAATTTCTcc > 1:2146490/1‑93 (MQ=255)
ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTcc < 1:3182396/93‑1 (MQ=255)
tgccGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTcc < 1:2298439/91‑1 (MQ=255)
tCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCa > 2:544177/1‑93 (MQ=255)
tCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCa > 1:1480055/1‑93 (MQ=255)
cGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGt > 2:3435664/1‑93 (MQ=255)
gCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa > 1:375934/1‑93 (MQ=255)
gCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa < 2:1418469/93‑1 (MQ=255)
cccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa < 1:3438529/92‑1 (MQ=255)
ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt > 2:4185830/1‑93 (MQ=255)
ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt > 2:1631068/1‑93 (MQ=255)
ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt > 1:1029211/1‑93 (MQ=255)
caaTTCGGTTCCCTATATCAATAACCACCGGGGAAAAAAGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt > 1:2652705/3‑93 (MQ=255)
cATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATc > 2:1046234/1‑93 (MQ=255)
cATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATc < 2:3735152/93‑1 (MQ=255)
ttCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGt > 2:3196027/1‑93 (MQ=255)
cGGTTCCCTATATCAATACCCACCGGGGAAAATCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTa < 1:3084632/93‑1 (MQ=255)
ggTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa < 2:2184575/93‑1 (MQ=255)
ggTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa < 1:3945129/93‑1 (MQ=255)
ggTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa < 2:500990/93‑1 (MQ=255)
ggTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa < 1:303276/93‑1 (MQ=255)
gTTCCCTATATCAATACCCACCGGGTAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAt < 2:1320801/93‑1 (MQ=255)
gTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAt < 1:2801222/93‑1 (MQ=255)
ttCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATg > 1:4096859/1‑93 (MQ=255)
tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa < 1:600664/93‑1 (MQ=255)
cccTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGat < 1:371817/93‑1 (MQ=255)
ccTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGata > 2:2885238/1‑93 (MQ=255)
ccTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGata < 1:1230769/93‑1 (MQ=255)
cTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat < 2:737517/93‑1 (MQ=255)
cTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat > 2:823313/1‑93 (MQ=255)
cTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat < 1:1638199/93‑1 (MQ=255)
cTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat > 1:4677268/1‑93 (MQ=255)
tataTCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATc > 1:4564084/1‑93 (MQ=255)
tataTCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATc > 1:2462984/1‑93 (MQ=255)
tataTCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATc < 2:1260367/93‑1 (MQ=255)
tataTCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATc < 2:1598683/93‑1 (MQ=255)
tatCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCgg > 2:695837/1‑93 (MQ=255)
tatCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCgg > 1:870115/1‑93 (MQ=255)
tatCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCgg > 1:2957524/1‑93 (MQ=255)
atCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg > 2:1183307/1‑93 (MQ=255)
atCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg < 2:4072514/93‑1 (MQ=255)
cAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgtt < 1:2212645/93‑1 (MQ=255)
aaTACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttg > 2:2607112/1‑93 (MQ=255)
tACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttgtt > 2:2359297/1‑93 (MQ=255)
cccACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGc < 2:201472/93‑1 (MQ=255)
cccACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGc < 2:1283706/93‑1 (MQ=255)
cACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGccc > 1:3701149/1‑91 (MQ=255)
cACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGcac > 2:3653395/1‑93 (MQ=255)
cACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGcac < 1:2950351/93‑1 (MQ=255)
cGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGc > 2:4205898/1‑93 (MQ=255)
ggggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGcc < 2:2812608/93‑1 (MQ=255)
gggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt < 1:535396/93‑1 (MQ=255)
gggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt < 1:2562219/93‑1 (MQ=255)
gggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt < 2:3076789/93‑1 (MQ=255)
aaaaCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGc > 1:4410497/1‑93 (MQ=255)
aaaaCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGCTGCACAGCCTCGGc > 1:2419145/1‑93 (MQ=255)
aCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATc > 1:672418/1‑93 (MQ=255)
aCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATc > 2:4660645/1‑93 (MQ=255)
cGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTTCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATcc < 1:4206119/93‑1 (MQ=255)
cGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATcc < 1:667215/93‑1 (MQ=255)
cGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATcc < 2:2434120/93‑1 (MQ=255)
tttGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGt > 1:4019638/1‑93 (MQ=255)
tttGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGt < 2:4486880/93‑1 (MQ=255)
tcatcaCGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtgg < 2:111275/93‑1 (MQ=255)
tcatcaCGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtgg > 2:3711044/1‑93 (MQ=255)
atcacGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtggcg > 1:2039474/1‑91 (MQ=255)
|
TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG > NC_000913/2947265‑2947444
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTG > NC_000913/2947263‑2947446
|
CGTGGTAAAGGAACGTAAAGCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACG < SRR4302535.4496029/94‑1 (MQ=60)
GTAAAGGAACGTAAAACCGAGTTGGTCGTGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG < SRR4302535.621185/94‑1 (MQ=60)
GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG > SRR4302535.1535763/1‑94 (MQ=60)
TAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGG < SRR4302535.1275772/94‑1 (MQ=60)
AAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGC > SRR4302535.4071551/1‑94 (MQ=60)
AAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGC > SRR4302535.4437260/1‑94 (MQ=60)
AGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGG > SRR4302535.2627514/1‑94 (MQ=60)
AGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGG > SRR4302535.3069111/1‑94 (MQ=60)
GAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTG < SRR4302535.947860/94‑1 (MQ=60)
AACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGCAAAACGTTTGTCATCACGCTCGGCGGTGA > SRR4302535.149251/1‑94 (MQ=60)
CGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAG < SRR4302535.2876131/94‑1 (MQ=60)
CGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAG > SRR4302535.435167/1‑94 (MQ=60)
AAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCA < SRR4302535.4208973/94‑1 (MQ=60)
AACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT < SRR4302535.1579356/94‑1 (MQ=60)
AACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT < SRR4302535.3559021/94‑1 (MQ=60)
AACCGAGTTGGGCGAGGAATTCCGCCATTCGTTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT < SRR4302535.3559020/94‑1 (MQ=60)
ACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTG < SRR4302535.452336/94‑1 (MQ=60)
ACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTG > SRR4302535.801804/1‑94 (MQ=60)
CCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGA < SRR4302535.2977089/94‑1 (MQ=60)
AGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCA < SRR4302535.1372882/94‑1 (MQ=60)
TTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATG < SRR4302535.1535884/94‑1 (MQ=60)
GGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAG < SRR4302535.2809198/94‑1 (MQ=60)
GTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGA > SRR4302535.1879158/1‑94 (MQ=60)
TCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAA < SRR4302535.2314103/94‑1 (MQ=60)
CGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAT < SRR4302535.2454333/94‑1 (MQ=60)
CGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAT < SRR4302535.1748417/94‑1 (MQ=60)
GAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATT > SRR4302535.2943/1‑94 (MQ=60)
GGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTC < SRR4302535.1118578/94‑1 (MQ=60)
GGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCT < SRR4302535.713032/94‑1 (MQ=60)
GGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCT > SRR4302535.1462855/1‑94 (MQ=60)
ATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGTATGAGAATTTCTCC > SRR4302535.2161931/1‑94 (MQ=60)
ATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCC > SRR4302535.4642204/1‑94 (MQ=60)
TTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCA > SRR4302535.1490644/1‑94 (MQ=60)
TTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCA < SRR4302535.3204387/94‑1 (MQ=60)
TGCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCA < SRR4302535.2314884/94‑1 (MQ=60)
TCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAG < SRR4302535.2644938/94‑1 (MQ=60)
CGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTA > SRR4302535.378540/1‑94 (MQ=60)
GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT > SRR4302535.1036518/1‑94 (MQ=60)
GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT < SRR4302535.3255428/94‑1 (MQ=60)
GCAATTCGGTTCCCTATATCAATAACCACCGGGGAAAAAAGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT > SRR4302535.2671708/1‑94 (MQ=60)
CCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT < SRR4302535.3462446/94‑1 (MQ=60)
CCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATC > SRR4302535.3746405/1‑94 (MQ=60)
CGGTTCCCTATATCAATACCCACCGGGGAAAATCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAA < SRR4302535.3106123/94‑1 (MQ=60)
GGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAT < SRR4302535.3972068/94‑1 (MQ=60)
GGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAT < SRR4302535.3561704/94‑1 (MQ=60)
GGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAT < SRR4302535.305383/94‑1 (MQ=60)
GTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATG < SRR4302535.2821145/94‑1 (MQ=60)
GTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATG > SRR4302535.4124899/1‑94 (MQ=60)
GTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATG < SRR4302535.3114223/94‑1 (MQ=60)
TTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGA > SRR4302535.1896188/1‑94 (MQ=60)
TCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGAT < SRR4302535.604865/94‑1 (MQ=60)
CCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATA < SRR4302535.374390/94‑1 (MQ=60)
CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT < SRR4302535.4540184/94‑1 (MQ=60)
CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT > SRR4302535.4708834/1‑94 (MQ=60)
CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT < SRR4302535.1239570/94‑1 (MQ=60)
CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC < SRR4302535.1650044/94‑1 (MQ=60)
CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC > SRR4302535.4595228/1‑94 (MQ=60)
CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC > SRR4302535.2576458/1‑94 (MQ=60)
CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC > SRR4302535.2480742/1‑94 (MQ=60)
ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGG > SRR4302535.876279/1‑94 (MQ=60)
ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGG > SRR4302535.2978294/1‑94 (MQ=60)
TATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGG < SRR4302535.614294/94‑1 (MQ=60)
CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG < SRR4302535.2228401/94‑1 (MQ=60)
ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT > SRR4302535.673403/1‑94 (MQ=60)
CCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCA > SRR4302535.3923434/1‑94 (MQ=60)
CCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCCC > SRR4302535.3726783/1‑94 (MQ=60)
CACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACA < SRR4302535.2971078/94‑1 (MQ=60)
CCCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAG < SRR4302535.1163576/94‑1 (MQ=60)
ACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAG > SRR4302535.3731411/1‑94 (MQ=60)
GGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCT > SRR4302535.6839/1‑94 (MQ=60)
GGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTC < SRR4302535.539136/94‑1 (MQ=60)
GGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTC < SRR4302535.2580662/94‑1 (MQ=60)
GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG < SRR4302535.285048/94‑1 (MQ=60)
GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG < SRR4302535.2405818/94‑1 (MQ=60)
AAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGC > SRR4302535.4440682/1‑94 (MQ=60)
AAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGCTGCACAGCCTCGGC > SRR4302535.2436562/1‑94 (MQ=60)
AAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCAT > SRR4302535.587847/1‑94 (MQ=60)
AAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCAT < SRR4302535.4329506/94‑1 (MQ=60)
AACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATC > SRR4302535.677111/1‑94 (MQ=60)
AACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATC < SRR4302535.3538327/94‑1 (MQ=60)
CGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTTCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCG < SRR4302535.4234902/94‑1 (MQ=60)
CGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCG < SRR4302535.671866/94‑1 (MQ=60)
GTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGT > SRR4302535.493739/1‑94 (MQ=60)
GTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGT > SRR4302535.4047142/1‑94 (MQ=60)
CATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGCG > SRR4302535.2054161/1‑94 (MQ=60)
TCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGT < SRR4302535.2142804/94‑1 (MQ=60)
CACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTG > SRR4302535.4590781/1‑94 (MQ=60)
CACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTG > SRR4302535.3867146/1‑94 (MQ=60)
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CGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTG > NC_000913/2947263‑2947446
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
