Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,947,355 T→C M31T (ATG→ACG)  argA → N‑acetylglutamate synthase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,947,3550TC100.0% 997.7 / NA 312M31T (ATG→ACG) argAN‑acetylglutamate synthase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (147/165);  total (147/165)

Only 100 of 327 total aligned reads displayed.

TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG  >  NC_000913/2947265‑2947444
                                                                                          |                                                                                         
tGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACATTTGTCATCACGc                                                                                         >  1:7571066/1‑93 (MQ=255)
   tAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcg                                                                                      <  2:585660/93‑1 (MQ=255)
   tAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcg                                                                                      >  2:6973198/1‑93 (MQ=255)
    aaaGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTcgg                                                                                     >  1:3150867/1‑93 (MQ=255)
         aaCGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTg                                                                                >  2:1143444/1‑93 (MQ=255)
          aCGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCGCCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGa                                                                               <  2:2841861/93‑1 (MQ=255)
          aCGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGa                                                                               <  1:7756932/93‑1 (MQ=255)
           cGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGaa                                                                              >  1:4764503/1‑93 (MQ=255)
           cGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGaa                                                                              >  1:5199312/1‑93 (MQ=255)
            gTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAg                                                                             >  2:7273126/1‑93 (MQ=255)
            gTAAAACCGAGTTGGTCGAGGGATTACGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAg                                                                             >  2:3562070/1‑93 (MQ=255)
               aaaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCTGTGAAGCCa                                                                          >  1:4048004/1‑93 (MQ=255)
                aaCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAt                                                                         <  2:5895447/93‑1 (MQ=255)
                 aCCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAtt                                                                        >  1:4596132/1‑93 (MQ=255)
                  ccGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTg                                                                       <  1:1808009/93‑1 (MQ=255)
                   cGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGa                                                                      <  2:2900116/93‑1 (MQ=255)
                   cGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGa                                                                      <  2:4627678/93‑1 (MQ=255)
                   cGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGa                                                                      >  2:1703135/1‑93 (MQ=255)
                   cGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGa                                                                      <  1:6887165/93‑1 (MQ=255)
                    gAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAg                                                                     <  2:5267437/93‑1 (MQ=255)
                    gAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAg                                                                     >  1:1570760/1‑93 (MQ=255)
                      gTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCa                                                                   <  1:2579199/93‑1 (MQ=255)
                      gTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCa                                                                   <  2:7245673/93‑1 (MQ=255)
                       ttGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAt                                                                  <  1:202442/93‑1 (MQ=255)
                         ggTCGAGGGGTCCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATga                                                                <  2:1607654/93‑1 (MQ=255)
                         ggTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATga                                                                <  2:7431593/93‑1 (MQ=255)
                         ggTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATga                                                                <  1:6516847/93‑1 (MQ=255)
                         ggTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATga                                                                <  1:1123760/93‑1 (MQ=255)
                           tCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATgaga                                                              <  1:4966311/93‑1 (MQ=255)
                            cGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGaa                                                             <  2:6141473/93‑1 (MQ=255)
                            cGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGaa                                                             >  1:2139856/1‑93 (MQ=255)
                            cGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGaa                                                             <  1:1886426/93‑1 (MQ=255)
                             gAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAt                                                            <  2:5475852/93‑1 (MQ=255)
                              aGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAtt                                                           >  1:3621893/1‑93 (MQ=255)
                               gggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAttt                                                          >  1:5859442/1‑93 (MQ=255)
                                ggATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtc                                                         <  1:2375942/93‑1 (MQ=255)
                                 gATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtct                                                        >  2:688909/1‑93 (MQ=255)
                                  aTTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTtctc                                                       <  1:4985859/93‑1 (MQ=255)
                                   ttCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTcc                                                      >  1:4583743/1‑93 (MQ=255)
                                     ccGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAg                                                    <  1:999206/93‑1 (MQ=255)
                                     ccGCCATTCGGTGCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAg                                                    <  2:3886445/93‑1 (MQ=255)
                                       gCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                  >  1:1302880/1‑93 (MQ=255)
                                       gCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                  <  2:4989131/93‑1 (MQ=255)
                                       gCCATTCGGGTCCCTATATCAATACCCACCGGGGAAAAACGTTTGGCAGCACGCTCGGCGGTGAAGCCATAGAGCATGAGAATCTCGCCAGTa                                                  >  1:5999867/1‑93 (MQ=255)
                                       cccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTa                                                  <  1:533080/92‑1 (MQ=255)
                                        ctaTTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAACTTCTCCAGTAt                                                 <  2:2571471/91‑1 (MQ=255)
                                        ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt                                                 <  1:7226800/93‑1 (MQ=255)
                                        ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt                                                 >  2:3609950/1‑93 (MQ=255)
                                        ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt                                                 >  1:7069478/1‑93 (MQ=255)
                                        ccATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAt                                                 <  1:4234289/93‑1 (MQ=255)
                                         cATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGACATTGAGCATGAGAATTTCTCCAGTATc                                                >  1:5595451/1‑93 (MQ=255)
                                         cATTCGGTTCCCTATAACAATACCCACCGGGGAAAACCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATc                                                <  2:7014730/93‑1 (MQ=255)
                                          aTTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCg                                               <  2:7392544/93‑1 (MQ=255)
                                             cGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTa                                            <  2:3143275/93‑1 (MQ=255)
                                              ggTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa                                           <  2:3013830/93‑1 (MQ=255)
                                              ggTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTaa                                           <  1:479436/93‑1 (MQ=255)
                                               gTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAt                                          >  2:7533014/1‑93 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        <  2:1981436/93‑1 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        <  2:412179/93‑1 (MQ=255)
                                                 tCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGa                                        >  2:5569809/1‑93 (MQ=255)
                                                   ccTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGata                                      >  1:2965908/1‑93 (MQ=255)
                                                    cTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat                                     <  2:2225168/93‑1 (MQ=255)
                                                    cTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGatat                                     <  2:5985194/93‑1 (MQ=255)
                                                     tataTCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATc                                    <  2:6205432/93‑1 (MQ=255)
                                                     tataTCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATc                                    >  2:4263122/1‑93 (MQ=255)
                                                      atatCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCg                                   <  1:6715054/93‑1 (MQ=255)
                                                       tatCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCgg                                  <  2:7741746/93‑1 (MQ=255)
                                                       tatCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCgg                                  >  1:5934432/1‑93 (MQ=255)
                                                        atCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                 <  1:4884953/93‑1 (MQ=255)
                                                        atCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCggg                                 <  1:2530440/93‑1 (MQ=255)
                                                         tCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgt                                <  2:5120008/93‑1 (MQ=255)
                                                          cAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgtt                               >  1:4500354/1‑93 (MQ=255)
                                                          cAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgtt                               <  1:3219228/93‑1 (MQ=255)
                                                          cAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgtt                               <  1:813177/93‑1 (MQ=255)
                                                           aaTACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttg                              >  1:2752888/1‑93 (MQ=255)
                                                             tACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttgtt                            >  2:4743151/1‑93 (MQ=255)
                                                             tACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGgttgtt                            >  1:5745635/1‑93 (MQ=255)
                                                                ccACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGca                         >  2:2365712/1‑93 (MQ=255)
                                                                 cACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGcac                        >  2:1513393/1‑93 (MQ=255)
                                                                 cACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGGTGTTGcac                        >  1:2605424/1‑93 (MQ=255)
                                                                  cccGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGcaca                       <  2:1893106/92‑1 (MQ=255)
                                                                   ccGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAg                      >  1:4125308/1‑93 (MQ=255)
                                                                    cGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGc                     <  2:4013958/93‑1 (MQ=255)
                                                                     ggggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGGACAGcc                    >  2:3702654/1‑93 (MQ=255)
                                                                     ggggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGcc                    <  2:3330636/93‑1 (MQ=255)
                                                                      gggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCt                   >  1:1474077/1‑93 (MQ=255)
                                                                       ggAAAAGCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                  <  1:6404944/93‑1 (MQ=255)
                                                                       ggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                  >  2:7839183/1‑93 (MQ=255)
                                                                       ggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                  <  2:4427435/93‑1 (MQ=255)
                                                                       ggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                  <  1:868801/93‑1 (MQ=255)
                                                                       ggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                  <  1:4638333/93‑1 (MQ=255)
                                                                       ggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                  <  1:4099992/93‑1 (MQ=255)
                                                                       ggAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAGGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTc                  <  1:333987/93‑1 (MQ=255)
                                                                           aagcGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCa              <  2:6635425/90‑1 (MQ=255)
                                                                           aaaCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCa              <  1:2833932/93‑1 (MQ=255)
                                                                           aaaCGTTTGTCATCACGCTCGGCGGTGAAGCCAGTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCATAGCCTCGGcc              >  1:432156/1‑92 (MQ=255)
                                                                                 ttGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTc        <  2:2681911/93‑1 (MQ=255)
                                                                                 ttGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTc        >  1:3446300/1‑93 (MQ=255)
                                                                                  tGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCt       <  2:5304943/93‑1 (MQ=255)
                                                                                    tcatcaCGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCtgg     >  2:2120703/1‑93 (MQ=255)
                                                                                          |                                                                                         
TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG  >  NC_000913/2947265‑2947444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGT  >  NC_000913/2947262‑2947448
                                                                                             |                                                                                             
GCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGCTGCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCAC                                                                                               <  SRR4302543.3297838/94‑1 (MQ=60)
CCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCAC                                                                                               <  SRR4302543.4229638/94‑1 (MQ=60)
CCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCAC                                                                                               <  SRR4302543.6376766/94‑1 (MQ=60)
 CGTGGTAAAGGAACGTAAAACCGAGTTGGTCGATGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACG                                                                                              <  SRR4302543.7682008/94‑1 (MQ=60)
 CGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACG                                                                                              <  SRR4302543.7888775/94‑1 (MQ=60)
 CGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACG                                                                                              <  SRR4302543.7176672/94‑1 (MQ=60)
 CGTGGTAAAGAAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACG                                                                                              <  SRR4302543.6072306/94‑1 (MQ=60)
  GTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGC                                                                                             <  SRR4302543.4954287/94‑1 (MQ=60)
  GTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGC                                                                                             >  SRR4302543.3031229/1‑94 (MQ=60)
  GTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGC                                                                                             <  SRR4302543.7201549/94‑1 (MQ=60)
  GTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACATTTGTCATCACGC                                                                                             >  SRR4302543.7643091/1‑94 (MQ=60)
  CTGGTAACGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGC                                                                                             <  SRR4302543.7201548/94‑1 (MQ=60)
   TGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCT                                                                                            <  SRR4302543.4579928/94‑1 (MQ=60)
     GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG                                                                                          >  SRR4302543.1001252/1‑94 (MQ=60)
     GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG                                                                                          >  SRR4302543.7169471/1‑94 (MQ=60)
     GTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCG                                                                                          >  SRR4302543.6680641/1‑94 (MQ=60)
      TAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGG                                                                                         >  SRR4302543.3179216/1‑94 (MQ=60)
      TAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGG                                                                                         <  SRR4302543.2044335/94‑1 (MQ=60)
       AAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGC                                                                                        >  SRR4302543.481273/1‑94 (MQ=60)
         AGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGG                                                                                      <  SRR4302543.1644559/94‑1 (MQ=60)
          GGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGT                                                                                     <  SRR4302543.4276650/94‑1 (MQ=60)
          GGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGT                                                                                     >  SRR4302543.51009/1‑94 (MQ=60)
           GAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTG                                                                                    >  SRR4302543.4716982/1‑94 (MQ=60)
           GAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTG                                                                                    >  SRR4302543.4716983/1‑94 (MQ=60)
           GAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTG                                                                                    <  SRR4302543.3583988/94‑1 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  >  SRR4302543.4808044/1‑94 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  <  SRR4302543.3263309/94‑1 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  <  SRR4302543.7830147/94‑1 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  >  SRR4302543.5246189/1‑94 (MQ=60)
             ACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAA                                                                                  <  SRR4302543.4341898/94‑1 (MQ=60)
              CGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAG                                                                                 <  SRR4302543.4646779/94‑1 (MQ=60)
               GTAAAATCGAGCTGGTCGAGGGATTCCGCCTTTTGGTTCCCTATATCAATACCCACCGGGGAATAACGTTAGTCATCATGCTCGGCGGTGAAGC                                                                                >  SRR4302543.7073396/1‑94 (MQ=60)
               GTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGC                                                                                >  SRR4302543.2502535/1‑94 (MQ=60)
                TAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCC                                                                               <  SRR4302543.113617/94‑1 (MQ=60)
                 AAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCTGTGAAGCCA                                                                              >  SRR4302543.4084226/1‑94 (MQ=60)
                 AAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCA                                                                              <  SRR4302543.4270115/94‑1 (MQ=60)
                 AAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCA                                                                              >  SRR4302543.7050798/1‑94 (MQ=60)
                  AAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAT                                                                             >  SRR4302543.740574/1‑94 (MQ=60)
                  AAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAT                                                                             <  SRR4302543.3203000/94‑1 (MQ=60)
                   AACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATT                                                                            >  SRR4302543.4637870/1‑94 (MQ=60)
                    NNNGAGTNGNGCGAGGGNTTNNNNCATTCGGTTCCCTATATCAATACNCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTG                                                                           <  SRR4302543.6683820/94‑1 (MQ=60)
                    ACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTG                                                                           >  SRR4302543.3297516/1‑94 (MQ=60)
                    ACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTG                                                                           <  SRR4302543.6763051/94‑1 (MQ=60)
                     CCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGA                                                                          <  SRR4302543.1824193/94‑1 (MQ=60)
                      CGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAG                                                                         >  SRR4302543.1584782/1‑94 (MQ=60)
                      CGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAG                                                                         <  SRR4302543.6951939/94‑1 (MQ=60)
                      CGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAG                                                                         >  SRR4302543.4099802/1‑94 (MQ=60)
                        AGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCA                                                                       <  SRR4302543.3136542/94‑1 (MQ=60)
                         GTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAT                                                                      <  SRR4302543.2602688/94‑1 (MQ=60)
                          TTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATG                                                                     <  SRR4302543.3989473/94‑1 (MQ=60)
                          TTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATG                                                                     <  SRR4302543.204149/94‑1 (MQ=60)
                           TGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGA                                                                    <  SRR4302543.4234145/94‑1 (MQ=60)
                            GGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAG                                                                   <  SRR4302543.1133956/94‑1 (MQ=60)
                            GGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAG                                                                   <  SRR4302543.1412852/94‑1 (MQ=60)
                            GGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAG                                                                   >  SRR4302543.2050100/1‑94 (MQ=60)
                            GGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAG                                                                   <  SRR4302543.6578220/94‑1 (MQ=60)
                            GGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAG                                                                   >  SRR4302543.4632229/1‑94 (MQ=60)
                             GTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGA                                                                  >  SRR4302543.3384042/1‑94 (MQ=60)
                              TCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAA                                                                 <  SRR4302543.5011517/94‑1 (MQ=60)
                              TCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAA                                                                 >  SRR4302543.2159009/1‑94 (MQ=60)
                               CGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAT                                                                <  SRR4302543.4109776/94‑1 (MQ=60)
                               CGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAT                                                                >  SRR4302543.5782256/1‑94 (MQ=60)
                               CGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAT                                                                <  SRR4302543.4677792/94‑1 (MQ=60)
                               CGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAT                                                                <  SRR4302543.1903380/94‑1 (MQ=60)
                               CGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAAT                                                                <  SRR4302543.5133501/94‑1 (MQ=60)
                                GAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATT                                                               >  SRR4302543.3653806/1‑94 (MQ=60)
                                GAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATT                                                               >  SRR4302543.2629741/1‑94 (MQ=60)
                                 acgtctcCCGCCATTCGGGTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTT                                                              <  SRR4302543.5006399/87‑1 (MQ=60)
                                 AGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTT                                                              >  SRR4302543.5912776/1‑94 (MQ=60)
                                  GGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTC                                                             >  SRR4302543.7015091/1‑94 (MQ=60)
                                  GGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTC                                                             <  SRR4302543.6452411/94‑1 (MQ=60)
                                   GGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCT                                                            <  SRR4302543.2397466/94‑1 (MQ=60)
                                     ATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCC                                                          >  SRR4302543.4625394/1‑94 (MQ=60)
                                     ATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCC                                                          >  SRR4302543.5672869/1‑94 (MQ=60)
                                     ATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCC                                                          <  SRR4302543.2775610/94‑1 (MQ=60)
                                     ATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCC                                                          <  SRR4302543.5031241/94‑1 (MQ=60)
                                     ATTCCCCCATTCGGTTCCCTATATCAATGCCCCCCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCC                                                          <  SRR4302543.5031240/94‑1 (MQ=60)
                                        CCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGT                                                       <  SRR4302543.1008032/94‑1 (MQ=60)
                                         CGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTA                                                      >  SRR4302543.5279386/1‑94 (MQ=60)
                                         CGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTA                                                      >  SRR4302543.1314448/1‑94 (MQ=60)
                                         CGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTA                                                      >  SRR4302543.1314449/1‑94 (MQ=60)
                                         CGCCATTCGGGTCCCTATATCAATACCCACCGGGGAAAAACGTTTGGCAGCACGCTCGGCGGTGAAGCCATAGAGCATGAGAATCTCGCCAGTA                                                      >  SRR4302543.6054972/1‑94 (MQ=60)
                                          GCCATTCGGTTCCCTATATCAATCCCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     <  SRR4302543.6034424/94‑1 (MQ=60)
                                          GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     <  SRR4302543.7375239/94‑1 (MQ=60)
                                          GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     >  SRR4302543.7138122/1‑94 (MQ=60)
                                          GCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     <  SRR4302543.6490483/94‑1 (MQ=60)
                                          CCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTAT                                                     <  SRR4302543.538019/94‑1 (MQ=60)
                                           CCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATC                                                    <  SRR4302543.4818307/94‑1 (MQ=60)
                                           CCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATC                                                    <  SRR4302543.7296813/94‑1 (MQ=60)
                                           CCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATC                                                    <  SRR4302543.4272696/94‑1 (MQ=60)
                                           CCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGACATTGAGCATGAGAATTTCTCCAGTATC                                                    >  SRR4302543.5646421/1‑94 (MQ=60)
                                            CATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCG                                                   <  SRR4302543.1652243/94‑1 (MQ=60)
                                            CATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCG                                                   <  SRR4302543.4612905/94‑1 (MQ=60)
                                            CATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCG                                                   >  SRR4302543.5470615/1‑94 (MQ=60)
                                             ATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGT                                                  >  SRR4302543.976136/1‑94 (MQ=60)
                                              TTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTT                                                 <  SRR4302543.5905943/94‑1 (MQ=60)
                                               TCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTA                                                <  SRR4302543.4932571/94‑1 (MQ=60)
                                                 GGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAT                                              <  SRR4302543.36539/94‑1 (MQ=60)
                                                 GGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAAT                                              <  SRR4302543.483867/94‑1 (MQ=60)
                                                   TTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGA                                            <  SRR4302543.7176576/94‑1 (MQ=60)
                                                   TTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGA                                            >  SRR4302543.5927755/1‑94 (MQ=60)
                                                     CCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATA                                          >  SRR4302543.2992845/1‑94 (MQ=60)
                                                      CCTATATCAATACCCACCGGGGACAAACGTTTGTCCTCACGCTCGGCGGTGAAGCAATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT                                         >  SRR4302543.4809280/1‑94 (MQ=60)
                                                      CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGACTTTCTCCAGTATCGTTAATGATAT                                         >  SRR4302543.1565511/1‑94 (MQ=60)
                                                      CCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGCGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATAT                                         >  SRR4302543.3157128/1‑94 (MQ=60)
                                                       CTATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATC                                        <  SRR4302543.2606327/94‑1 (MQ=60)
                                                        TATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCG                                       <  SRR4302543.3195778/94‑1 (MQ=60)
                                                        TATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCG                                       <  SRR4302543.7723659/94‑1 (MQ=60)
                                                         ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATCTCGG                                      >  SRR4302543.1993749/1‑94 (MQ=60)
                                                         ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGG                                      >  SRR4302543.5988710/1‑94 (MQ=60)
                                                         ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGG                                      >  SRR4302543.6881674/1‑94 (MQ=60)
                                                         ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGG                                      >  SRR4302543.7917267/1‑94 (MQ=60)
                                                         ATATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGG                                      <  SRR4302543.6778516/94‑1 (MQ=60)
                                                          TATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGG                                     <  SRR4302543.2898010/94‑1 (MQ=60)
                                                          TATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGG                                     <  SRR4302543.5195328/94‑1 (MQ=60)
                                                           ATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGT                                    <  SRR4302543.4929485/94‑1 (MQ=60)
                                                           ATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGT                                    <  SRR4302543.4929484/94‑1 (MQ=60)
                                                           ATCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGT                                    <  SRR4302543.2553467/94‑1 (MQ=60)
                                                            TCAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTT                                   >  SRR4302543.4541269/1‑94 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG                                  <  SRR4302543.820337/94‑1 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG                                  <  SRR4302543.820338/94‑1 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG                                  >  SRR4302543.2593903/1‑94 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG                                  >  SRR4302543.2777928/1‑94 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTG                                  <  SRR4302543.3248316/94‑1 (MQ=60)
                                                             CAATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGACATTGAGCATGAGAATTTCTCCAGTATCGATAATGATATCGGGTTG                                  >  SRR4302543.2777929/1‑94 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                >  SRR4302543.4633389/1‑94 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                >  SRR4302543.5798008/1‑94 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                <  SRR4302543.4156219/94‑1 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTT                                >  SRR4302543.3583143/1‑94 (MQ=60)
                                                               ATACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGAGAAGCCATTGAGCATGAGAATTTCTACAGTATCGTTAATGATATCGGGGTGTT                                >  SRR4302543.4221892/1‑94 (MQ=60)
                                                                 ACCCCCCGTGGAAAAACGTTTGTCATCACGCTCGGCGTTGAAGGCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGC                              <  SRR4302543.4138573/94‑1 (MQ=60)
                                                                 ACCCACCGGGGAAAAACGTTTGTCATCCCGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGC                              >  SRR4302543.6134223/1‑94 (MQ=60)
                                                                 ACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGC                              >  SRR4302543.6134222/1‑94 (MQ=60)
                                                                 ACCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGC                              >  SRR4302543.1829601/1‑94 (MQ=60)
                                                                  CCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCA                             >  SRR4302543.5826801/1‑94 (MQ=60)
                                                                  CCCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCA                             >  SRR4302543.4923799/1‑94 (MQ=60)
                                                                   CCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCAC                            <  SRR4302543.2905500/94‑1 (MQ=60)
                                                                   CCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCAC                            <  SRR4302543.6948142/94‑1 (MQ=60)
                                                                   CCACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGGTGTTGCAC                            >  SRR4302543.2629091/1‑94 (MQ=60)
                                                                    CACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACC                           >  SRR4302543.4396671/1‑94 (MQ=60)
                                                                    CACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACA                           <  SRR4302543.4590920/94‑1 (MQ=60)
                                                                     ACCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAG                          >  SRR4302543.4162504/1‑94 (MQ=60)
                                                                      CCGGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGC                         >  SRR4302543.1168158/1‑94 (MQ=60)
                                                                        GGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCT                       >  SRR4302543.1487357/1‑94 (MQ=60)
                                                                        GGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCT                       >  SRR4302543.1487356/1‑94 (MQ=60)
                                                                        GGGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCT                       >  SRR4302543.1943654/1‑94 (MQ=60)
                                                                         GGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTC                      <  SRR4302543.843287/94‑1 (MQ=60)
                                                                         GGGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTC                      <  SRR4302543.5559663/94‑1 (MQ=60)
                                                                          GGAAAAGCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.6465264/94‑1 (MQ=60)
                                                                          GGAAAAGCGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.6465265/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.3769270/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.876556/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.4136835/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.7960119/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.337272/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.4680517/94‑1 (MQ=60)
                                                                          GGAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCAGGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCG                     <  SRR4302543.337053/94‑1 (MQ=60)
                                                                           GAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGG                    <  SRR4302543.2236004/94‑1 (MQ=60)
                                                                           GAAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGG                    >  SRR4302543.6048282/1‑94 (MQ=60)
                                                                           GAAAAACGTTTGGCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGG                    <  SRR4302543.2236005/94‑1 (MQ=60)
                                                                            AAAAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGC                   >  SRR4302543.7725972/1‑94 (MQ=60)
                                                                             AAAACGTTTGTCATCACGCTCGGCGGTGAAGCCAGTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCATAGCCTCGGCC                  >  SRR4302543.436204/1‑94 (MQ=60)
                                                                              AAACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCAT                 <  SRR4302543.2859851/94‑1 (MQ=60)
                                                                                ACGTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCC               >  SRR4302543.5813878/1‑94 (MQ=60)
                                                                                  GTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGT             >  SRR4302543.2442665/1‑94 (MQ=60)
                                                                                  GTTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGT             >  SRR4302543.5958358/1‑94 (MQ=60)
                                                                                   TTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTC            >  SRR4302543.3477160/1‑94 (MQ=60)
                                                                                   TTTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTC            >  SRR4302543.1704631/1‑94 (MQ=60)
                                                                                    TTTTCATCACGCTCGTCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCT           <  SRR4302543.7882010/94‑1 (MQ=60)
                                                                                    TTGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCT           <  SRR4302543.4422247/94‑1 (MQ=60)
                                                                                     TGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTG          >  SRR4302543.1902681/1‑94 (MQ=60)
                                                                                     TGTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTG          >  SRR4302543.5310486/1‑94 (MQ=60)
                                                                                     TGTCACCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTG          <  SRR4302543.2565316/94‑1 (MQ=60)
                                                                                      GTCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGG         >  SRR4302543.2611859/1‑94 (MQ=60)
                                                                                       TCATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGT        <  SRR4302543.2174621/94‑1 (MQ=60)
                                                                                        CATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTG       >  SRR4302543.4854244/1‑94 (MQ=60)
                                                                                        CATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTG       >  SRR4302543.279959/1‑94 (MQ=60)
                                                                                         ATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG      <  SRR4302543.502943/94‑1 (MQ=60)
                                                                                         ATCACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGG      <  SRR4302543.2656890/94‑1 (MQ=60)
                                                                                           CACGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTG    >  SRR4302543.4475471/1‑94 (MQ=60)
                                                                                             CGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGT  <  SRR4302543.7325331/94‑1 (MQ=60)
                                                                                             |                                                                                             
CCGTGGTAAAGGAACGTAAAACCGAGTTGGTCGAGGGATTCCGCCATTCGGTTCCCTATATCAATACCCACCGGGGAAAAACGTTTGTCATCATGCTCGGCGGTGAAGCCATTGAGCATGAGAATTTCTCCAGTATCGTTAATGATATCGGGTTGTTGCACAGCCTCGGCATCCGTCTGGTGGTGGT  >  NC_000913/2947262‑2947448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑