Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,078,245 |
C→G |
G470G (GGG→GGC) |
tktA ← |
transketolase 1 isozyme |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,078,245 | 0 | C | G | 100.0%
| 607.4
/ NA
| 197 | G470G (GGG→GGC) | tktA | transketolase 1 isozyme |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (89/108); total (89/108) |
Only 100 of 207 total aligned reads displayed.
CGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACCTGCTCAACCGGCTGGTGAGTCGGCCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGC > NC_000913/3078155‑3078334
|
gcgGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCg > 2:1435597/1‑93 (MQ=255)
gATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCTGGCCGTCt > 2:3095932/1‑93 (MQ=255)
gATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCt > 1:3926155/1‑93 (MQ=255)
gATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCt > 1:980402/1‑93 (MQ=255)
aTTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCtt < 1:4578294/93‑1 (MQ=255)
ttCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTc > 1:1058619/1‑93 (MQ=255)
ttCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTc < 2:1137113/93‑1 (MQ=255)
ttCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTc > 2:1843052/1‑93 (MQ=255)
ttCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTc > 2:3244025/1‑93 (MQ=255)
ttCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTc > 1:95041/1‑93 (MQ=255)
aaCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGcc > 2:3160715/1‑93 (MQ=255)
aaCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGcc > 1:1918935/1‑93 (MQ=255)
aaCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGcc < 2:4359092/93‑1 (MQ=255)
aaCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGcc < 2:572093/93‑1 (MQ=255)
aCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGccc < 2:652458/93‑1 (MQ=255)
aCCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGATGGTGAGTCGGGCCGTCTTCGccc > 2:726954/1‑93 (MQ=255)
ccTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCa < 1:798517/93‑1 (MQ=255)
ccTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCa > 2:2397640/1‑93 (MQ=255)
ggTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGAc < 2:1481004/93‑1 (MQ=255)
tCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCg < 2:272220/93‑1 (MQ=255)
acacGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGAt < 1:424511/93‑1 (MQ=255)
cacGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATg < 1:159712/93‑1 (MQ=255)
cacGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCCCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATg < 2:1949917/93‑1 (MQ=255)
acGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGCTgg > 1:3742475/1‑93 (MQ=255)
acGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATgg > 1:557738/1‑93 (MQ=255)
cGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGa < 2:4582021/93‑1 (MQ=255)
gACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGt < 2:1325444/93‑1 (MQ=255)
gACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGt < 2:176388/93‑1 (MQ=255)
aCGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAggc > 1:2970338/1‑91 (MQ=255)
aCGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTc > 1:3091237/1‑93 (MQ=255)
cGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCg > 1:2609517/1‑93 (MQ=255)
gCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGt < 2:2951178/93‑1 (MQ=255)
ccATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTg > 1:882581/1‑93 (MQ=255)
ccATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTg < 1:3773048/93‑1 (MQ=255)
ccATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTg > 2:3904734/1‑93 (MQ=255)
aTGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTggg > 2:866996/1‑93 (MQ=255)
aTGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTggg > 1:1770327/1‑93 (MQ=255)
tGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGgt > 2:4061717/1‑93 (MQ=255)
tAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGgtgt > 1:4305004/1‑93 (MQ=255)
tAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGgtgt > 2:2513978/1‑93 (MQ=255)
aCATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTaaa < 1:663713/93‑1 (MQ=255)
aCATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTaaa < 1:2058200/93‑1 (MQ=255)
cATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAc > 2:4124217/1‑93 (MQ=255)
cATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAc < 2:4335465/93‑1 (MQ=255)
aTGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAcc > 2:3330554/1‑93 (MQ=255)
gTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCAt > 2:497378/1‑93 (MQ=255)
gTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCAt > 1:2286732/1‑93 (MQ=255)
ggggTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCAcc > 2:806927/1‑93 (MQ=255)
gggTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCt > 1:213886/1‑93 (MQ=255)
gggTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCt > 2:3613604/1‑93 (MQ=255)
gggTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCt < 1:1356844/93‑1 (MQ=255)
gTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGa < 2:2365290/93‑1 (MQ=255)
gTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGa < 1:2716565/93‑1 (MQ=255)
aCGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGc < 2:2309782/93‑1 (MQ=255)
aCGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGc < 2:1369014/93‑1 (MQ=255)
cgcgCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCt < 1:4047556/93‑1 (MQ=255)
gcAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGtt > 2:258580/1‑93 (MQ=255)
gcAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGtt < 1:2816731/93‑1 (MQ=255)
cAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGttt < 1:4479015/93‑1 (MQ=255)
cAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGttt < 1:3871911/93‑1 (MQ=255)
agagAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtc > 2:1590096/1‑93 (MQ=255)
agagAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtc > 1:1531609/1‑93 (MQ=255)
gagaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtca > 1:1735022/1‑93 (MQ=255)
gagaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtca < 2:3019575/93‑1 (MQ=255)
gagaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtca > 2:2345394/1‑93 (MQ=255)
agaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtcat < 1:1861391/93‑1 (MQ=255)
agaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtcat < 1:3495189/93‑1 (MQ=255)
agaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtcat > 2:4522427/1‑93 (MQ=255)
gaAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCACACAGATGGAGTCGTGCGGGTAAACCATCACCCGCCGCTGTTtcctc > 2:1645801/1‑93 (MQ=255)
aaGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtcatca > 2:1979237/1‑93 (MQ=255)
aaGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTtcatca < 2:4648326/93‑1 (MQ=255)
aGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAg < 1:1558653/93‑1 (MQ=255)
aGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAg < 2:2841371/93‑1 (MQ=255)
gCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAgc < 1:1840187/93‑1 (MQ=255)
gCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAgc < 2:3763540/93‑1 (MQ=255)
gACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAgcgc > 2:4207295/1‑93 (MQ=255)
gACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTAGGTGTAAACCATCACCTGACGCTGTTTCATCAgcgc < 2:3802622/93‑1 (MQ=255)
ttGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGc > 2:2818108/2‑93 (MQ=255)
tGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGcc > 1:513337/1‑93 (MQ=255)
tCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAta > 1:2549252/1‑93 (MQ=255)
cAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtac > 1:2629929/1‑93 (MQ=255)
cAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtac < 2:2049208/93‑1 (MQ=255)
cAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtac < 1:3216753/93‑1 (MQ=255)
aaCCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtacg > 1:3826328/1‑93 (MQ=255)
aaCCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtacg < 1:3591610/93‑1 (MQ=255)
aCCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtacgt > 1:2687222/1‑93 (MQ=255)
ccGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtacgta < 1:1104884/93‑1 (MQ=255)
cGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtacgtac > 2:4169185/1‑93 (MQ=255)
cGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCAtacgtac < 1:1894971/93‑1 (MQ=255)
gCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACgg > 1:3351581/1‑93 (MQ=255)
gCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACgg < 1:1272300/93‑1 (MQ=255)
cTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGc < 1:113663/93‑1 (MQ=255)
ggTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGt < 1:4186851/93‑1 (MQ=255)
ggTGACTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGt < 2:1127866/93‑1 (MQ=255)
tGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTa < 1:139278/93‑1 (MQ=255)
gTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGt < 2:2173782/93‑1 (MQ=255)
gTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGt < 1:4135836/93‑1 (MQ=255)
gTCGGGCCGTCTTCGCCCAGACCAATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGt > 1:4650750/1‑93 (MQ=255)
cGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGc < 2:4420011/93‑1 (MQ=255)
cGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGc < 1:445930/93‑1 (MQ=255)
|
CGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACCTGCTCAACCGGCTGGTGAGTCGGCCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGC > NC_000913/3078155‑3078334
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACCTGCTCAACCGGCTGGTGAGTCGGCCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGTAT > NC_000913/3078153‑3078338
|
ACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGC < SRR4302535.1316014/94‑1 (MQ=60)
CCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCC < SRR4302535.3313157/94‑1 (MQ=60)
CGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCG < SRR4302535.685861/94‑1 (MQ=60)
GCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGT > SRR4302535.2624243/1‑94 (MQ=60)
CGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTC > SRR4302535.2640800/1‑94 (MQ=60)
GGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCT > SRR4302535.987370/1‑94 (MQ=60)
GGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCT > SRR4302535.3952979/1‑94 (MQ=60)
ATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTC > SRR4302535.1066155/1‑94 (MQ=60)
ATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTC > SRR4302535.95718/1‑94 (MQ=60)
ATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTC < SRR4302535.4609482/94‑1 (MQ=60)
ATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTC < SRR4302535.2208149/94‑1 (MQ=60)
TTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCG > SRR4302535.1096198/1‑94 (MQ=60)
TAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCC < SRR4302535.3490409/94‑1 (MQ=60)
CAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCC > SRR4302535.1932765/1‑94 (MQ=60)
AACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCC > SRR4302535.3548464/1‑94 (MQ=60)
CCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAG < SRR4302535.1597747/94‑1 (MQ=60)
CCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAG < SRR4302535.804123/94‑1 (MQ=60)
CTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGA > SRR4302535.3862504/1‑94 (MQ=60)
TGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGAC < SRR4302535.4688204/94‑1 (MQ=60)
GGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACC < SRR4302535.4143360/94‑1 (MQ=60)
GGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACC > SRR4302535.1122205/1‑94 (MQ=60)
CACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGAT < SRR4302535.2671063/94‑1 (MQ=60)
CACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGAT < SRR4302535.4495423/94‑1 (MQ=60)
CACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGAT < SRR4302535.3779910/94‑1 (MQ=60)
ACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATG < SRR4302535.427472/94‑1 (MQ=60)
ACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATG > SRR4302535.1819355/1‑94 (MQ=60)
CACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGCTGG > SRR4302535.3768369/1‑94 (MQ=60)
CACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGG > SRR4302535.561643/1‑94 (MQ=60)
CACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGG < SRR4302535.160832/94‑1 (MQ=60)
CGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAG < SRR4302535.191398/94‑1 (MQ=60)
GACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTC < SRR4302535.1543714/94‑1 (MQ=60)
GACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTC > SRR4302535.3112764/1‑94 (MQ=60)
GACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGGC > SRR4302535.2991188/1‑94 (MQ=60)
ACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCG > SRR4302535.2628243/1‑94 (MQ=60)
CGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGT > SRR4302535.122957/1‑94 (MQ=60)
CGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGT > SRR4302535.3031449/1‑94 (MQ=60)
GCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTG > SRR4302535.888830/1‑94 (MQ=60)
CCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGG < SRR4302535.3799070/94‑1 (MQ=60)
CATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGG < SRR4302535.2408442/94‑1 (MQ=60)
CATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGG > SRR4302535.1783157/1‑94 (MQ=60)
TGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTG < SRR4302535.3659257/94‑1 (MQ=60)
GTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGT > SRR4302535.4334457/1‑94 (MQ=60)
AGACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAA < SRR4302535.4283432/94‑1 (MQ=60)
ACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAC < SRR4302535.2073030/94‑1 (MQ=60)
ACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAC < SRR4302535.1742298/94‑1 (MQ=60)
ACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAC < SRR4302535.668352/94‑1 (MQ=60)
ACATGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGACGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAAC > SRR4302535.4186641/1‑94 (MQ=60)
TGTTCGGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCAT > SRR4302535.2303068/1‑94 (MQ=60)
GGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCT > SRR4302535.215352/1‑94 (MQ=60)
GGGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCT > SRR4302535.4648941/1‑94 (MQ=60)
GGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTG < SRR4302535.4011467/94‑1 (MQ=60)
GGGTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTG < SRR4302535.1366551/94‑1 (MQ=60)
GTTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGAC < SRR4302535.2735972/94‑1 (MQ=60)
TTACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACG < SRR4302535.205306/94‑1 (MQ=60)
TACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGC > SRR4302535.1481629/1‑94 (MQ=60)
ACGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGATTCGTGGGTGTAAACCATCACCTGACGCT < SRR4302535.2708267/94‑1 (MQ=60)
CGCGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTG < SRR4302535.4075262/94‑1 (MQ=60)
CGCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGAT > SRR4302535.589930/1‑94 (MQ=60)
GCAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTT < SRR4302535.2836738/94‑1 (MQ=60)
CAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTC < SRR4302535.3898519/94‑1 (MQ=60)
CAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTC > SRR4302535.1542645/1‑94 (MQ=60)
CAGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTC < SRR4302535.4509766/94‑1 (MQ=60)
AGAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCA > SRR4302535.1747566/1‑94 (MQ=60)
GAGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCAT < SRR4302535.3835706/94‑1 (MQ=60)
AGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATC < SRR4302535.3519469/94‑1 (MQ=60)
AGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATC < SRR4302535.1874814/94‑1 (MQ=60)
AGAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATC > SRR4302535.977637/1‑94 (MQ=60)
GAAGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCA < SRR4302535.3276074/94‑1 (MQ=60)
AGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCAGCTGACGCTGTTTCATCAGC > SRR4302535.4336323/1‑94 (MQ=60)
AGCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGC < SRR4302535.1569893/94‑1 (MQ=60)
GCGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCG < SRR4302535.1853461/94‑1 (MQ=60)
CGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGC > SRR4302535.912624/1‑94 (MQ=60)
CGACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGC > SRR4302535.4656388/1‑94 (MQ=60)
ACTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAG > SRR4302535.2793561/1‑94 (MQ=60)
CTTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGG > SRR4302535.4533195/1‑94 (MQ=60)
TTGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCC > SRR4302535.516924/1‑94 (MQ=60)
TGCTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCGTCAGCGCAGCCA < SRR4302535.3235310/94‑1 (MQ=60)
CTCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATA > SRR4302535.2567598/1‑94 (MQ=60)
TCAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATAC > SRR4302535.2648771/1‑94 (MQ=60)
CAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACG < SRR4302535.3533473/94‑1 (MQ=60)
CAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACG > SRR4302535.3852726/1‑94 (MQ=60)
CAACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACG < SRR4302535.3239035/94‑1 (MQ=60)
AACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGT > SRR4302535.2706432/1‑94 (MQ=60)
AACCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGT < SRR4302535.3616522/94‑1 (MQ=60)
CCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTAC < SRR4302535.1112780/94‑1 (MQ=60)
CCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTAC < SRR4302535.1874606/94‑1 (MQ=60)
CCGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTAC < SRR4302535.1896542/94‑1 (MQ=60)
CGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACG < SRR4302535.3915765/94‑1 (MQ=60)
CGGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACG < SRR4302535.1908609/94‑1 (MQ=60)
GGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTAGGG > SRR4302535.2957371/1‑94 (MQ=60)
GGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGG < SRR4302535.138902/94‑1 (MQ=60)
GGCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGG > SRR4302535.3374926/1‑94 (MQ=60)
GCTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGC < SRR4302535.1281392/94‑1 (MQ=60)
CTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCG > SRR4302535.4264168/1‑94 (MQ=60)
CTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCG < SRR4302535.114457/94‑1 (MQ=60)
CTGGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCG > SRR4302535.529321/1‑94 (MQ=60)
GGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTT < SRR4302535.1995475/94‑1 (MQ=60)
GGTGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTT < SRR4302535.4215505/94‑1 (MQ=60)
TGAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTAC < SRR4302535.140254/94‑1 (MQ=60)
GAGTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACG < SRR4302535.2144089/94‑1 (MQ=60)
AGTCGGGCCGTCTTCGCCCAGACCAATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGT > SRR4302535.4682243/1‑94 (MQ=60)
GTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTG < SRR4302535.4164153/94‑1 (MQ=60)
GTCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTG < SRR4302535.1780251/94‑1 (MQ=60)
TCGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGC < SRR4302535.132776/94‑1 (MQ=60)
CGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCG < SRR4302535.809185/94‑1 (MQ=60)
CGGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCG < SRR4302535.449049/94‑1 (MQ=60)
GGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGT > SRR4302535.2067042/1‑94 (MQ=60)
GGGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGT < SRR4302535.2920082/94‑1 (MQ=60)
GGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGTA > SRR4302535.4688907/1‑94 (MQ=60)
GGCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGTA > SRR4302535.3261003/1‑94 (MQ=60)
GCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGTAT < SRR4302535.272297/94‑1 (MQ=60)
GCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGTAT < SRR4302535.4023450/94‑1 (MQ=60)
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ACCGCGGATTCAACCTGGTCACACGGACGCCATGTAGACATGTTCGGGGTTACGCGCAGAGAAGCGACCTGCTCAACCGGCTGGTGAGTCGGCCCGTCTTCGCCCAGACCGATGGAGTCGTGGGTGTAAACCATCACCTGACGCTGTTTCATCAGCGCAGCCATACGTACGGCGTTACGTGCGTAT > NC_000913/3078153‑3078338
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
