Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,085,064 |
G→A |
E114K (GAA→AAA) |
metK → |
methionine adenosyltransferase 1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,085,064 | 0 | G | A | 100.0%
| 770.2
/ NA
| 210 | E114K (GAA→AAA) | metK | methionine adenosyltransferase 1 |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (109/101); total (109/101) |
Only 100 of 216 total aligned reads displayed.
GGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACAC > NC_000913/3084974‑3085153
|
gCTTTGACGCTATCTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAAc < 2:4217048/93‑1 (MQ=255)
gCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAAc < 2:1103987/93‑1 (MQ=255)
cTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACa > 1:3227016/1‑93 (MQ=255)
tttGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAg < 1:3643187/93‑1 (MQ=255)
ttGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAgg > 1:1375187/1‑93 (MQ=255)
ttGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAgg < 2:47834/93‑1 (MQ=255)
gACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGgc < 2:854286/93‑1 (MQ=255)
gACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGgc < 2:3446777/93‑1 (MQ=255)
cTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCgg > 2:4062971/1‑93 (MQ=255)
aaCTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGt > 1:3649967/1‑93 (MQ=255)
aaCTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGt < 1:4450400/93‑1 (MQ=255)
tCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGAc > 1:1093099/1‑93 (MQ=255)
tCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGAc > 1:402539/1‑93 (MQ=255)
tCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGAc < 1:1150624/93‑1 (MQ=255)
cTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCa > 2:2522854/1‑93 (MQ=255)
cTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCa < 1:246083/93‑1 (MQ=255)
tgtgCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAg < 1:3270160/93‑1 (MQ=255)
gtgCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGCGCCGATCCGCTGAAACAGGGCGCGGGTGACCAgg < 2:608311/93‑1 (MQ=255)
tgCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAggg > 2:2656803/1‑93 (MQ=255)
cGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTc < 1:4329099/93‑1 (MQ=255)
cGGTTCTGAGCCCTATCGGCATACAGTCTCCTGACATCAACCAGGGCCTTGACCGTGCCGATCCGCTGAAACAGGGGGCGGGTGACCAGGGTc < 2:2387410/93‑1 (MQ=255)
gTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTg < 1:408105/93‑1 (MQ=255)
ttCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGa < 2:4389348/93‑1 (MQ=255)
cTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATg < 2:1317279/93‑1 (MQ=255)
tGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGt < 2:3814122/93‑1 (MQ=255)
tGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGt < 1:4531438/93‑1 (MQ=255)
tGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGGGACCAGGGTCTGATGt > 1:2193690/1‑93 (MQ=255)
tGAGCGCGATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGt < 1:3517870/93‑1 (MQ=255)
taGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGtt < 2:1115171/92‑1 (MQ=255)
gcgcTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTg > 2:30036/1‑93 (MQ=255)
gcTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGc > 1:167122/1‑93 (MQ=255)
cTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCt > 1:929253/1‑93 (MQ=255)
tATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTa > 2:927954/1‑93 (MQ=255)
aTCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTAc < 2:1713587/93‑1 (MQ=255)
cGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGc > 1:3848540/1‑93 (MQ=255)
ggCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCa > 1:4389503/1‑93 (MQ=255)
cAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAAc < 2:140546/93‑1 (MQ=255)
cAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAAc > 2:1847853/1‑93 (MQ=255)
aaCAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTa < 2:2562175/93‑1 (MQ=255)
aaCAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTa < 2:2508850/93‑1 (MQ=255)
aCAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTaa < 1:662178/93‑1 (MQ=255)
cAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAAt > 1:2135730/1‑93 (MQ=255)
aGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATg > 2:1915510/1‑93 (MQ=255)
gTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGa < 2:3664160/93‑1 (MQ=255)
ctcCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGaaa < 2:210604/93‑1 (MQ=255)
tcCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAc > 2:4495067/1‑93 (MQ=255)
tcCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGGCTGATGTTTGGCTACGCAACTAATGAAAc > 1:1031275/1‑93 (MQ=255)
ccTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAcc < 1:2386198/93‑1 (MQ=255)
ccTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAcc > 2:3768712/1‑93 (MQ=255)
cTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCg > 1:2949071/1‑93 (MQ=255)
cTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCg > 1:3989720/1‑93 (MQ=255)
gACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGAc < 1:2762355/93‑1 (MQ=255)
aCATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACg > 1:1973079/1‑93 (MQ=255)
cATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGt < 1:3722826/93‑1 (MQ=255)
cATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGt > 1:3153174/1‑93 (MQ=255)
aTCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTg > 2:643919/1‑93 (MQ=255)
tCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGc > 1:480356/1‑93 (MQ=255)
cAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCt < 2:3716416/93‑1 (MQ=255)
aaCCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTg > 1:2025280/1‑93 (MQ=255)
aCCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGa > 2:2802145/1‑93 (MQ=255)
aCCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGa < 1:2944337/93‑1 (MQ=255)
ccAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAt > 1:3022096/1‑93 (MQ=255)
ccAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAt < 1:2290614/93‑1 (MQ=255)
cAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATg > 1:2514694/1‑93 (MQ=255)
gggCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGca > 1:1490511/1‑92 (MQ=255)
gggCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGCGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGcc > 2:1049533/1‑93 (MQ=255)
ggCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCa < 2:1679816/93‑1 (MQ=255)
cGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGc < 1:1209911/93‑1 (MQ=255)
gTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGca > 2:1815763/1‑93 (MQ=255)
gTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGca > 2:1374403/1‑93 (MQ=255)
ttGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcac < 1:91113/93‑1 (MQ=255)
ttGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcac > 2:1520626/1‑93 (MQ=255)
tGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacc < 1:4255973/93‑1 (MQ=255)
aCCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcaccta > 2:2460240/1‑93 (MQ=255)
aCCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcaccta < 1:4212386/93‑1 (MQ=255)
ccGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctat > 1:3065390/1‑93 (MQ=255)
ccGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctat > 1:3445528/1‑93 (MQ=255)
cGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatc < 2:3088185/93‑1 (MQ=255)
cGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatc < 2:4542723/93‑1 (MQ=255)
cGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGGCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatc > 2:1858126/1‑93 (MQ=255)
gTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGGCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatca > 2:593875/1‑93 (MQ=255)
tGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcac > 1:1620890/1‑93 (MQ=255)
tGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcac > 1:4107535/1‑93 (MQ=255)
tGCCGATCCGCTGAAACAGGGCGCGGGTGAACAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcac > 2:1187027/1‑93 (MQ=255)
gCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacc > 1:1550745/1‑93 (MQ=255)
ccGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacct > 1:3879357/1‑93 (MQ=255)
cGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcaccta < 2:2270417/93‑1 (MQ=255)
cGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcaccta > 1:2885650/1‑93 (MQ=255)
gATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacctat > 1:2127151/1‑93 (MQ=255)
gATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacctat > 2:3984351/1‑93 (MQ=255)
gATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacctat > 1:3754440/1‑93 (MQ=255)
gATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacctat < 1:2537699/93‑1 (MQ=255)
gATCCGCTCAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGcacctatcacctat < 2:729375/93‑1 (MQ=255)
tCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGc < 2:2892174/93‑1 (MQ=255)
tCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGc > 2:4625595/1‑93 (MQ=255)
tCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGc > 2:1539298/1‑93 (MQ=255)
tCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGc < 1:2719047/93‑1 (MQ=255)
cGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGcac > 1:2087091/1‑93 (MQ=255)
cTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCacac > 2:3401613/1‑93 (MQ=255)
cTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCacac < 2:1599522/93‑1 (MQ=255)
|
GGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACAC > NC_000913/3084974‑3085153
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACACCG > NC_000913/3084971‑3085155
|
ATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGA > SRR4302535.4595989/1‑94 (MQ=60)
GGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAAC < SRR4302535.143796/94‑1 (MQ=60)
GCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACA > SRR4302535.3249383/1‑94 (MQ=60)
GCTTTGACACTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACA < SRR4302535.158249/94‑1 (MQ=60)
TTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGG < SRR4302535.4110748/94‑1 (MQ=60)
TTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGG < SRR4302535.3668417/94‑1 (MQ=60)
TTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGG < SRR4302535.3668418/94‑1 (MQ=60)
TTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGG > SRR4302535.1385012/1‑94 (MQ=60)
TTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGG < SRR4302535.4313333/94‑1 (MQ=60)
TTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGG < SRR4302535.2070121/94‑1 (MQ=60)
ACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGC > SRR4302535.3077065/1‑94 (MQ=60)
CGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCG > SRR4302535.2199943/1‑94 (MQ=60)
GCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGG > SRR4302535.736139/1‑94 (MQ=60)
CTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGG > SRR4302535.3240764/1‑94 (MQ=60)
CTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGG < SRR4302535.4040663/94‑1 (MQ=60)
CTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGG > SRR4302535.1139148/1‑94 (MQ=60)
CTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGG > SRR4302535.2445060/1‑94 (MQ=60)
CTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGG > SRR4302535.3276175/1‑94 (MQ=60)
CTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGG > SRR4302535.3955525/1‑94 (MQ=60)
TAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGT < SRR4302535.2775090/94‑1 (MQ=60)
TAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGT > SRR4302535.3675239/1‑94 (MQ=60)
AACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTG < SRR4302535.4480923/94‑1 (MQ=60)
CTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGAC > SRR4302535.1100884/1‑94 (MQ=60)
CTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGAC > SRR4302535.405361/1‑94 (MQ=60)
TCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACC < SRR4302535.1158843/94‑1 (MQ=60)
CTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAG > SRR4302535.3540255/1‑94 (MQ=60)
CTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAG < SRR4302535.247771/94‑1 (MQ=60)
TGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGG < SRR4302535.3292876/94‑1 (MQ=60)
GTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGG < SRR4302535.4406716/94‑1 (MQ=60)
GTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGCGACCAGGG > SRR4302535.4096758/1‑94 (MQ=60)
CGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCT < SRR4302535.4358698/94‑1 (MQ=60)
GTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGA < SRR4302535.410963/94‑1 (MQ=60)
GTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACAGTGCCGATCCGCTGAAACAGGGCGCGGGAGACCAGcgcctca > SRR4302535.138589/1‑87 (MQ=60)
CTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGT > SRR4302535.2729874/1‑94 (MQ=60)
CTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGT < SRR4302535.919722/94‑1 (MQ=60)
CTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGGGACCAGGGTCTGATGT > SRR4302535.2209321/1‑94 (MQ=60)
TGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTT < SRR4302535.4562454/94‑1 (MQ=60)
TGAGCGCGATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTT < SRR4302535.3542308/94‑1 (MQ=60)
CGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGC > SRR4302535.168283/1‑94 (MQ=60)
GCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCT > SRR4302535.935830/1‑94 (MQ=60)
CTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTA > SRR4302535.2981598/1‑94 (MQ=60)
CTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTA > SRR4302535.2547432/1‑94 (MQ=60)
TATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTAC > SRR4302535.3688329/1‑94 (MQ=60)
TCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGC > SRR4302535.3875029/1‑94 (MQ=60)
CGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCA > SRR4302535.4419537/1‑94 (MQ=60)
GGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAC > SRR4302535.2789852/1‑94 (MQ=60)
GCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAAC > SRR4302535.2221183/1‑94 (MQ=60)
CAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACT < SRR4302535.4002588/94‑1 (MQ=60)
CAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACT < SRR4302535.2497612/94‑1 (MQ=60)
ACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAAT < SRR4302535.1343299/94‑1 (MQ=60)
ACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAAT < SRR4302535.3542639/94‑1 (MQ=60)
ACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAAT < SRR4302535.666799/94‑1 (MQ=60)
ACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAAT > SRR4302535.2151118/1‑94 (MQ=60)
CAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATG < SRR4302535.1501403/94‑1 (MQ=60)
AGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGA > SRR4302535.166644/1‑94 (MQ=60)
GTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAA > SRR4302535.669367/1‑94 (MQ=60)
CTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAAC < SRR4302535.4318067/94‑1 (MQ=60)
CTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGGCTGATGTTTGGCTACGCAACTAATGAAAC > SRR4302535.1038599/1‑94 (MQ=60)
TCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACC < SRR4302535.1042421/94‑1 (MQ=60)
TCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACC < SRR4302535.533749/94‑1 (MQ=60)
CCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCG > SRR4302535.4017009/1‑94 (MQ=60)
CCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCG < SRR4302535.2403345/94‑1 (MQ=60)
CCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCG > SRR4302535.2969789/1‑94 (MQ=60)
TGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGTCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGAC < SRR4302535.1564031/94‑1 (MQ=60)
TGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGAC < SRR4302535.3614343/94‑1 (MQ=60)
GACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACG > SRR4302535.1987289/1‑94 (MQ=60)
GACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACG < SRR4302535.1746779/94‑1 (MQ=60)
GACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACG > SRR4302535.4154933/1‑94 (MQ=60)
GACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACG < SRR4302535.2782038/94‑1 (MQ=60)
ACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGT < SRR4302535.470298/94‑1 (MQ=60)
ACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGT > SRR4302535.3175083/1‑94 (MQ=60)
ACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGT > SRR4302535.2141001/1‑94 (MQ=60)
CATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTG > SRR4302535.1179034/1‑94 (MQ=60)
CATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTG < SRR4302535.3748614/94‑1 (MQ=60)
ATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGC > SRR4302535.483724/1‑94 (MQ=60)
ATCAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGC > SRR4302535.4429630/1‑94 (MQ=60)
CAACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTG > SRR4302535.2039875/1‑94 (MQ=60)
ACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAT < SRR4302535.455726/94‑1 (MQ=60)
ACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAT > SRR4302535.3043256/1‑94 (MQ=60)
ACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAT > SRR4302535.2025207/1‑94 (MQ=60)
ACCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGAT < SRR4302535.2965034/94‑1 (MQ=60)
CCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATG > SRR4302535.2532822/1‑94 (MQ=60)
CCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATG < SRR4302535.2307003/94‑1 (MQ=60)
CCAGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATG > SRR4302535.2149251/1‑94 (MQ=60)
AGGGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCA > SRR4302535.1501212/1‑94 (MQ=60)
GGCGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAG > SRR4302535.3748863/1‑94 (MQ=60)
CGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCA < SRR4302535.1218604/94‑1 (MQ=60)
CGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCA > SRR4302535.3381909/1‑94 (MQ=60)
CGTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCA > SRR4302535.3002090/1‑94 (MQ=60)
GTTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCAC < SRR4302535.943211/94‑1 (MQ=60)
TTGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACC < SRR4302535.91758/94‑1 (MQ=60)
TGACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCT < SRR4302535.4285130/94‑1 (MQ=60)
GACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTA < SRR4302535.2968836/94‑1 (MQ=60)
ACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTAT > SRR4302535.3086817/1‑94 (MQ=60)
ACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTAT > SRR4302535.3469484/1‑94 (MQ=60)
ACCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTAT < SRR4302535.4241216/94‑1 (MQ=60)
CCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATC < SRR4302535.381143/94‑1 (MQ=60)
CCGTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATC < SRR4302535.290873/94‑1 (MQ=60)
GTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCAC > SRR4302535.1632585/1‑94 (MQ=60)
GTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCAC > SRR4302535.4135661/1‑94 (MQ=60)
GTGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATATTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCAC > SRR4302535.2533766/1‑94 (MQ=60)
TGCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACC > SRR4302535.1561914/1‑94 (MQ=60)
GCCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCT > SRR4302535.3905988/1‑94 (MQ=60)
CCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTA < SRR4302535.3142503/94‑1 (MQ=60)
CCGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTA > SRR4302535.2906066/1‑94 (MQ=60)
CGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTAT > SRR4302535.2142487/1‑94 (MQ=60)
CGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTAT > SRR4302535.3780414/1‑94 (MQ=60)
CGATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTAT > SRR4302535.2146928/1‑94 (MQ=60)
GATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATG > SRR4302535.238019/1‑94 (MQ=60)
GATCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATG < SRR4302535.2555979/94‑1 (MQ=60)
TCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCA < SRR4302535.3901580/94‑1 (MQ=60)
TCCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCA < SRR4302535.2738468/94‑1 (MQ=60)
CCGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCAC > SRR4302535.2102122/1‑94 (MQ=60)
CGCTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACA > SRR4302535.4273308/1‑94 (MQ=60)
CTGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACACC > SRR4302535.260921/1‑94 (MQ=60)
TGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACACCG > SRR4302535.279850/1‑94 (MQ=60)
TGAAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACACCG > SRR4302535.1140884/1‑94 (MQ=60)
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ATGGGCTTTGACGCTAACTCCTGTGCGGTTCTGAGCGCTATCGGCAAACAGTCTCCTGACATCAACCAGGGCGTTGACCGTGCCGATCCGCTGGAACAGGGCGCGGGTGACCAGGGTCTGATGTTTGGCTACGCAACTAATGAAACCGACGTGCTGATGCCAGCACCTATCACCTATGCACACCG > NC_000913/3084971‑3085155
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
