Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,107,469 |
+C |
intergenic (‑296/‑101) |
b2965 ← / → yqgA |
ornithine decarboxylase isozyme/putative transport protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,107,469 | 1 | . | C | 100.0%
| 612.3
/ NA
| 196 | intergenic (‑296/‑101) | b2965/yqgA | ornithine decarboxylase isozyme/putative transport protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (79/117); total (79/117) |
Only 100 of 214 total aligned reads displayed.
GAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTT‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC > NC_000913/3107377‑3107555
|
gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCttt > 1:2498104/1‑93 (MQ=255)
gAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCttt > 1:2106237/1‑93 (MQ=255)
aCGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCtttcgc > 2:646799/1‑90 (MQ=255)
cGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAATCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaaa < 1:3194077/93‑1 (MQ=255)
cGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaaa < 2:47123/93‑1 (MQ=255)
cGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTaaa < 2:4608655/93‑1 (MQ=255)
aTAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGc < 1:3528543/93‑1 (MQ=255)
tAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCg < 2:911576/93‑1 (MQ=255)
tAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCg < 1:2023495/93‑1 (MQ=255)
aaGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGt < 2:257661/93‑1 (MQ=255)
gagagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCaa > 1:2265158/1‑93 (MQ=255)
gagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGc < 2:2892274/93‑1 (MQ=255)
gagaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGc > 1:149066/1‑93 (MQ=255)
gaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCa < 2:2148700/93‑1 (MQ=255)
gaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCa < 1:3676429/93‑1 (MQ=255)
gaATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCa < 1:572068/93‑1 (MQ=255)
aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAGTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAg < 1:3304789/93‑1 (MQ=255)
aaTGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAg < 2:160754/93‑1 (MQ=255)
tGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGa > 1:2793924/1‑93 (MQ=255)
tAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACt < 1:1060138/93‑1 (MQ=255)
tAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACt > 2:2167961/1‑93 (MQ=255)
aGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACttt > 2:2699446/1‑93 (MQ=255)
ggAGATGGAGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTAGTGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTg > 2:1461479/1‑93 (MQ=255)
gagaTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGc < 1:833770/93‑1 (MQ=255)
gaTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGa > 2:1174203/1‑93 (MQ=255)
gaTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGa > 1:336682/1‑93 (MQ=255)
aTGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaa > 1:1407385/1‑93 (MQ=255)
gCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaa < 1:3650265/93‑1 (MQ=255)
ggTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa < 1:2086551/92‑1 (MQ=255)
cGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa < 2:3706036/93‑1 (MQ=255)
cGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaa > 1:777622/1‑93 (MQ=255)
gTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGaacaaac > 1:2967226/1‑93 (MQ=255)
aTCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGc > 1:1712575/1‑93 (MQ=255)
tCGGGCAAGCTCCGTCCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGcc < 2:2642149/93‑1 (MQ=255)
tCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGcc < 1:1917300/93‑1 (MQ=255)
cGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAATAAGCCa < 1:265977/93‑1 (MQ=255)
ggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATc > 1:701693/1‑93 (MQ=255)
ggCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATc < 1:4307507/93‑1 (MQ=255)
cAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGa < 2:2602667/93‑1 (MQ=255)
cTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGc > 1:3157441/1‑93 (MQ=255)
ccGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAc > 1:129279/1‑93 (MQ=255)
ccGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAc < 1:3800180/93‑1 (MQ=255)
ccGTAAAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGTCGGCAc < 2:3183287/93‑1 (MQ=255)
tACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaa < 2:40394/93‑1 (MQ=255)
aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa > 1:3953133/1‑93 (MQ=255)
aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa < 2:3434327/93‑1 (MQ=255)
aCAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCaaa < 1:2349014/93‑1 (MQ=255)
cAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAc < 1:4490755/93‑1 (MQ=255)
agagagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACg < 2:3007673/93‑1 (MQ=255)
gagagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACgg < 2:584260/93‑1 (MQ=255)
gagagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACgg > 1:3079386/1‑93 (MQ=255)
agagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGt > 1:4513158/1‑93 (MQ=255)
agagGAGAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGt < 1:4607827/93‑1 (MQ=255)
agagGAGAAAATCCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGt < 1:2776853/93‑1 (MQ=255)
gaggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc > 2:85810/1‑93 (MQ=255)
gaggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc < 2:3317705/93‑1 (MQ=255)
gaggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTc < 1:132106/93‑1 (MQ=255)
aggagAAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCa > 2:4631885/1‑93 (MQ=255)
aggagAAAAGTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCa < 2:4264256/93‑1 (MQ=255)
gagaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCata < 1:863631/93‑1 (MQ=255)
agaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataa < 1:4465106/93‑1 (MQ=255)
gaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat < 2:1183246/93‑1 (MQ=255)
gaAAATTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataat < 1:541588/93‑1 (MQ=255)
aaaaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCataata < 2:1676256/93‑1 (MQ=255)
aaaTTCGCTCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAtaataa < 2:1309183/93‑1 (MQ=255)
aaaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAtaataa > 2:3644505/1‑93 (MQ=255)
aaaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAtaataa > 1:2901951/1‑93 (MQ=255)
aaaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAtaataa < 1:1835531/93‑1 (MQ=255)
aaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAg < 2:3588956/93‑1 (MQ=255)
aaTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAg < 2:2827978/93‑1 (MQ=255)
aTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGa < 2:2764312/93‑1 (MQ=255)
aTTCGCGCAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGATCTTTGCAAACAAACAAGCCATCGACGGCACCAATCGGTCATAATAAGa < 2:4358233/93‑1 (MQ=255)
gcgcAATCATGTCACCTTTCTCTAAAGCGTGCAAGCCAGGACTTTGCTAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAAt < 2:2071124/93‑1 (MQ=255)
cgcAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATc < 2:4296125/93‑1 (MQ=255)
gcAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCa > 1:1367349/1‑93 (MQ=255)
gcAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCa < 2:1006592/93‑1 (MQ=255)
cAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaa < 1:4158000/93‑1 (MQ=255)
cAATCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCAAACAAACAAGCCATCGACGGCACCAAACGGCCATAATAAGAAAATCaa < 2:2953399/93‑1 (MQ=255)
aaTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaaa < 2:3068658/93‑1 (MQ=255)
aaTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaaa > 1:4252422/1‑93 (MQ=255)
aaTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaaa > 2:3220345/1‑93 (MQ=255)
aaTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCaaa < 1:4298257/93‑1 (MQ=255)
aTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc < 2:3760549/93‑1 (MQ=255)
aTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc < 1:114081/93‑1 (MQ=255)
aTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc < 1:3488164/93‑1 (MQ=255)
aTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc < 1:1615972/93‑1 (MQ=255)
aTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc > 2:1622502/1‑93 (MQ=255)
aTCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAc < 2:1285094/93‑1 (MQ=255)
tCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACa < 2:39374/93‑1 (MQ=255)
tCATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACa > 1:1988073/1‑93 (MQ=255)
cATGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACaa > 2:1407175/1‑93 (MQ=255)
aTGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAAt > 1:2522549/1‑93 (MQ=255)
tGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATa > 2:2812302/1‑93 (MQ=255)
tGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATa > 1:1199947/1‑93 (MQ=255)
tGGCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATa > 1:4110223/1‑93 (MQ=255)
ggCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAc > 2:18557/1‑93 (MQ=255)
ggCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAc < 1:1098407/93‑1 (MQ=255)
gCACCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACa < 1:1556580/93‑1 (MQ=255)
aCCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGc < 2:184455/93‑1 (MQ=255)
aCCTTTCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGc < 2:4508249/93‑1 (MQ=255)
|
GAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTTT‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC > NC_000913/3107377‑3107555
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑T‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG > NC_000913/3107376‑3107562
|
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑T > SRR4302535.2121430/1‑94 (MQ=60)
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑T > SRR4302535.2516126/1‑94 (MQ=60)
AAACTGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑Tcg < SRR4302535.753926/94‑3 (MQ=60)
AAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑Tcg > SRR4302535.1504638/1‑92 (MQ=60)
AACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑Tcgc > SRR4302535.2297402/1‑91 (MQ=60)
ACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCT < SRR4302535.4520659/94‑1 (MQ=60)
ACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTAGCGCAATCATGGAACCTT‑‑TCGCT > SRR4302535.4338790/1‑94 (MQ=60)
CGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAATCTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAG < SRR4302535.3216176/94‑1 (MQ=60)
CGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAG < SRR4302535.4229185/94‑1 (MQ=60)
CGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAG > SRR4302535.398358/1‑94 (MQ=60)
CGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAG > SRR4302535.760889/1‑94 (MQ=60)
GATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGC < SRR4302535.2800453/94‑1 (MQ=60)
ATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCG > SRR4302535.3508500/1‑94 (MQ=60)
ATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCG < SRR4302535.3553046/94‑1 (MQ=60)
ATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCG > SRR4302535.1464660/1‑94 (MQ=60)
TAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGT < SRR4302535.2038079/94‑1 (MQ=60)
AGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGC > SRR4302535.2397854/1‑94 (MQ=60)
AGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGA > SRR4302535.3210796/1‑94 (MQ=60)
CGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAA > SRR4302535.2281299/1‑94 (MQ=60)
GAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAG > SRR4302535.3721682/1‑94 (MQ=60)
AGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGC > SRR4302535.150104/1‑94 (MQ=60)
GAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCC > SRR4302535.4330159/1‑94 (MQ=60)
AGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCA < SRR4302535.1072343/94‑1 (MQ=60)
GAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAG < SRR4302535.27972/94‑1 (MQ=60)
GAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAG < SRR4302535.3701881/94‑1 (MQ=60)
GAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAG < SRR4302535.576085/94‑1 (MQ=60)
AATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAGTTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGG < SRR4302535.3327781/94‑1 (MQ=60)
ATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGA > SRR4302535.2813803/1‑94 (MQ=60)
GTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACT > SRR4302535.3701169/1‑94 (MQ=60)
GTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACT < SRR4302535.1192495/94‑1 (MQ=60)
TAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTT < SRR4302535.669377/94‑1 (MQ=60)
TAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTT < SRR4302535.1067686/94‑1 (MQ=60)
AAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTT < SRR4302535.3078158/94‑1 (MQ=60)
GAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCG < SRR4302535.839615/94‑1 (MQ=60)
GAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCG > SRR4302535.1375176/1‑94 (MQ=60)
AGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGA > SRR4302535.339009/1‑94 (MQ=60)
GATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAA > SRR4302535.1417441/1‑94 (MQ=60)
ATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAAC > SRR4302535.1455153/1‑94 (MQ=60)
GCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAA > SRR4302535.783088/1‑94 (MQ=60)
GCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAA < SRR4302535.3675540/94‑1 (MQ=60)
GGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAAC < SRR4302535.2101581/94‑1 (MQ=60)
CGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAAC > SRR4302535.2988046/1‑94 (MQ=60)
GTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACA < SRR4302535.2969126/94‑1 (MQ=60)
TGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAA < SRR4302535.2136239/94‑1 (MQ=60)
CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC > SRR4302535.1724955/1‑94 (MQ=60)
CATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGC > SRR4302535.2023286/1‑94 (MQ=60)
ATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCC < SRR4302535.2517578/94‑1 (MQ=60)
TCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCA < SRR4302535.1931116/94‑1 (MQ=60)
TCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCA < SRR4302535.867303/94‑1 (MQ=60)
TCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCA < SRR4302535.2102344/94‑1 (MQ=60)
CGGGCAAGCTCCGCACAGGGAGGATAAAGTGCGCGCAATCATGGCGCCTTCCT‑‑CAAAAGCGTGCAAGCCGGGACTTTGCGAACAAACAAGCCAT < SRR4302535.770648/94‑1 (MQ=23)
CGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAATAAGCCAT < SRR4302535.267825/94‑1 (MQ=60)
GGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATC > SRR4302535.706614/1‑94 (MQ=60)
GGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCG < SRR4302535.4336974/94‑1 (MQ=60)
ACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGC > SRR4302535.2865134/1‑94 (MQ=60)
ACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGC > SRR4302535.3179361/1‑94 (MQ=60)
CTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCA < SRR4302535.2649189/94‑1 (MQ=60)
TCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCAC > SRR4302535.130188/1‑94 (MQ=60)
CCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACC < SRR4302535.3826376/94‑1 (MQ=60)
TACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAA > SRR4302535.3980121/1‑94 (MQ=60)
ACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAAC < SRR4302535.2365858/94‑1 (MQ=60)
CAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACG > SRR4302535.1677938/1‑94 (MQ=60)
CAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACG < SRR4302535.4521583/94‑1 (MQ=60)
AGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGG > SRR4302535.3100859/1‑94 (MQ=60)
GAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGT > SRR4302535.4544105/1‑94 (MQ=60)
AGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTC < SRR4302535.4639139/94‑1 (MQ=60)
AGAGGAGAAAATCCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTC < SRR4302535.2796622/94‑1 (MQ=60)
GAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCA < SRR4302535.1280576/94‑1 (MQ=60)
GAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCA < SRR4302535.133030/94‑1 (MQ=60)
AGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAT > SRR4302535.3201872/1‑94 (MQ=60)
AGGAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCAT < SRR4302535.1132192/94‑1 (MQ=60)
GAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAA > SRR4302535.4526247/1‑94 (MQ=60)
GAGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAA < SRR4302535.869733/94‑1 (MQ=60)
AGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAAT < SRR4302535.133001/94‑1 (MQ=60)
AGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAAT < SRR4302535.3160096/94‑1 (MQ=60)
AGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAAT < SRR4302535.1917487/94‑1 (MQ=60)
AGAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAAT < SRR4302535.4495731/94‑1 (MQ=60)
GAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA < SRR4302535.545368/94‑1 (MQ=60)
GAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA > SRR4302535.4453975/1‑94 (MQ=60)
GAAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATA < SRR4302535.1950457/94‑1 (MQ=60)
AAAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAA > SRR4302535.2922465/1‑94 (MQ=60)
AAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAG < SRR4302535.4629106/94‑1 (MQ=60)
AAATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAG < SRR4302535.1848772/94‑1 (MQ=60)
ATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAA < SRR4302535.1006934/94‑1 (MQ=60)
ATTCGCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAA > SRR4302535.3753907/1‑94 (MQ=60)
GCGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATC < SRR4302535.824218/94‑1 (MQ=60)
CGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGATGGCACCAAAGGGTCATAATAAGAAAATGA > SRR4302535.2081894/1‑94 (MQ=60)
CGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCA > SRR4302535.566108/1‑94 (MQ=60)
CGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCA > SRR4302535.4653514/1‑94 (MQ=60)
CGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCA > SRR4302535.2580940/1‑94 (MQ=60)
CGCAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCA > SRR4302535.1377122/1‑94 (MQ=60)
CAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAA < SRR4302535.4186462/94‑1 (MQ=60)
CAATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAA > SRR4302535.4281559/1‑94 (MQ=60)
AATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAC < SRR4302535.1619467/94‑1 (MQ=60)
AATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAC < SRR4302535.4327670/94‑1 (MQ=60)
AATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAC < SRR4302535.3334912/94‑1 (MQ=60)
AATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAAC < SRR4302535.3534279/94‑1 (MQ=60)
ATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACA > SRR4302535.2002392/1‑94 (MQ=60)
ATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACA < SRR4302535.114882/94‑1 (MQ=60)
ATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACA < SRR4302535.1627617/94‑1 (MQ=60)
ATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACA < SRR4302535.3512380/94‑1 (MQ=60)
ATCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACA < SRR4302535.367417/94‑1 (MQ=60)
TCATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAA > SRR4302535.332263/1‑94 (MQ=60)
CATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAAT > SRR4302535.2540726/1‑94 (MQ=60)
ATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATA > SRR4302535.1208545/1‑94 (MQ=60)
ATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATA > SRR4302535.4138361/1‑94 (MQ=60)
ATGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATA < SRR4302535.4159115/94‑1 (MQ=60)
TGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAC < SRR4302535.2020260/94‑1 (MQ=60)
TGGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATAC > SRR4302535.4318013/1‑94 (MQ=60)
GGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACA > SRR4302535.3933096/1‑94 (MQ=60)
GGCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACA < SRR4302535.1106229/94‑1 (MQ=60)
GCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG < SRR4302535.1567800/94‑1 (MQ=60)
GCACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAG < SRR4302535.1810963/94‑1 (MQ=60)
CACCTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGC > SRR4302535.1383594/1‑94 (MQ=60)
CTT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAA > SRR4302535.105346/1‑94 (MQ=60)
TT‑‑TCGCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAAC > SRR4302535.638052/1‑94 (MQ=60)
T‑‑C‑GCTAAGGCGGGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAG < SRR4302535.4413802/94‑1 (MQ=60)
T‑‑C‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAG > SRR4302535.1873461/1‑94 (MQ=60)
T‑‑C‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAG < SRR4302535.4481288/94‑1 (MQ=60)
C‑GCTAAAGCGTGCAAGCCAGGACTTTGCTAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG < SRR4302535.333111/94‑1 (MQ=60)
C‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG > SRR4302535.2771949/1‑94 (MQ=60)
C‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG > SRR4302535.212698/1‑94 (MQ=60)
C‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG < SRR4302535.2260546/94‑1 (MQ=60)
C‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG < SRR4302535.313575/94‑1 (MQ=60)
|
CGAAACGGCGATAAGCGAGAGAATGTAAGGAGATGGCGTGCATCGGGCAAACTCCGTACAGAGAGGAGAAAATTCGCGCAATCATGGCACCTT‑‑T‑GCTAAAGCGTGCAAGCCAGGACTTTGCGAACAAACAAGCCATCGACGGCACCAAACGGTCATAATAAGAAAATCAAACAATACAGCTAACAGG > NC_000913/3107376‑3107562
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
