Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,112,176 |
T→C |
H65R (CAC→CGC) |
b2972 ← |
putative peptidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,112,176 | 0 | T | C | 99.4%
| 510.8
/ NA
| 163 | H65R (CAC→CGC) | b2972 | putative peptidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (95/67); minor base G (0/1); total (95/68) |
| Fisher's exact test for biased strand distribution p-value = 4.17e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 175 total aligned reads displayed.
TGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGTGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGG > NC_000913/3112086‑3112264
|
tGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAgcgc > 1:1322526/1‑93 (MQ=255)
gACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGcgcg > 1:654583/1‑93 (MQ=255)
aCAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGa > 2:594912/1‑93 (MQ=255)
cAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGaa < 1:1928385/93‑1 (MQ=255)
gTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAAcg > 2:2614184/1‑93 (MQ=255)
gTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAAcg > 1:3082804/1‑93 (MQ=255)
tCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAAcgc > 1:2747528/1‑93 (MQ=255)
tCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAAcgc > 1:4313899/1‑93 (MQ=255)
gcgGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCgg < 1:3540215/93‑1 (MQ=255)
ccgGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCgg < 1:3042780/92‑1 (MQ=255)
gCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAg < 1:4146965/93‑1 (MQ=255)
gCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAg < 1:2182090/93‑1 (MQ=255)
gCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAg < 2:1311369/93‑1 (MQ=255)
gCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAg > 1:2965061/1‑93 (MQ=255)
cAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAgc < 2:4299846/93‑1 (MQ=255)
aGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAgcg > 2:2865921/1‑93 (MQ=255)
gcgcCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAATGCGGTAgcgc > 2:747891/1‑93 (MQ=255)
gcCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCaa > 1:1198467/1‑93 (MQ=255)
gcCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCaa < 1:3815851/93‑1 (MQ=255)
ccttttGTGCATCAGCTAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGGGCGAACGCGGTAGCGCAAg < 2:522234/90‑1 (MQ=255)
cccTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAg < 2:4011613/93‑1 (MQ=255)
cccTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAg < 1:399159/93‑1 (MQ=255)
cccTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAg > 2:3285414/1‑93 (MQ=255)
cccTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAg > 1:16691/1‑93 (MQ=255)
ccTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAgg > 1:2130135/1‑93 (MQ=255)
cTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGc > 2:3782264/1‑93 (MQ=255)
tttGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCt > 2:4136172/1‑93 (MQ=255)
tttGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCt > 1:1386283/1‑93 (MQ=255)
ttGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTGGCGCAAGGCtt < 1:3299123/93‑1 (MQ=255)
gAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTAt < 1:829803/93‑1 (MQ=255)
gAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTAt < 2:654863/93‑1 (MQ=255)
aGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTAtt < 2:1890777/93‑1 (MQ=255)
aGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTAtt < 2:661092/93‑1 (MQ=255)
gCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTAttt < 2:1172569/93‑1 (MQ=255)
cATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTAtttt < 2:3579084/93‑1 (MQ=255)
aTCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTAttttt > 2:806144/1‑93 (MQ=255)
tCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTg > 2:2075879/1‑93 (MQ=255)
tCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTg > 2:3993997/1‑93 (MQ=255)
gCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACt > 1:36184/1‑93 (MQ=255)
gCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACt > 2:1819953/1‑93 (MQ=255)
cAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTgc > 2:1329969/1‑93 (MQ=255)
cAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTgc < 1:2607571/93‑1 (MQ=255)
agaACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTATCGCAAGGCTTATTTTTGACTGCGCAc > 2:3792832/1‑93 (MQ=255)
agaACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCAc < 2:3576832/93‑1 (MQ=255)
agaACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCAc < 2:3539761/93‑1 (MQ=255)
agaACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCAc > 1:2193179/1‑93 (MQ=255)
gaACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACt < 2:1436787/93‑1 (MQ=255)
aaCAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTc < 2:2444213/93‑1 (MQ=255)
aCAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCg > 2:1665428/1‑93 (MQ=255)
aGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGAGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGAc > 2:4422199/1‑93 (MQ=255)
gCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGGAGCGCAAGGCTTATTTTTGACTGCGCACTCcaca > 2:3343333/1‑93 (MQ=255)
gCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGAGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACa < 2:488976/93‑1 (MQ=255)
ggAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACAtt < 1:984704/93‑1 (MQ=255)
ggAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACAtt < 1:220102/93‑1 (MQ=255)
gAATATTGTCACGGATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACAttt > 1:1802939/1‑93 (MQ=255)
aaTATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTc > 2:3608684/1‑93 (MQ=255)
aaTATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTc < 1:2558856/93‑1 (MQ=255)
aaTATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTc > 2:2584887/1‑93 (MQ=255)
atatTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCa < 1:3019252/93‑1 (MQ=255)
tatTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCAc > 2:1477336/1‑93 (MQ=255)
tatTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCAc < 1:387374/93‑1 (MQ=255)
tatTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCAc > 2:3455417/1‑93 (MQ=255)
tatTGTCACGTATCCGGATGGTCTGCTGACAATGTGGCCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCAc < 2:3352860/93‑1 (MQ=255)
ttGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCg < 2:4335961/93‑1 (MQ=255)
gTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTg > 1:4176528/1‑93 (MQ=255)
tCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGa > 2:919421/1‑93 (MQ=255)
tCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGa > 1:1487400/1‑93 (MQ=255)
cACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGaa > 2:4052007/1‑93 (MQ=255)
cACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGaa > 1:2821974/1‑93 (MQ=255)
aTCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTcc > 2:783822/1‑93 (MQ=255)
tCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCg < 2:3320614/93‑1 (MQ=255)
ccGGATGGTCTGCTGACAATGTGGGCAGCGTGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGc < 2:2306593/93‑1 (MQ=255)
cGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGcc > 2:1882788/1‑93 (MQ=255)
cGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGcc > 2:3152373/1‑93 (MQ=255)
ggATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAACATCCGCCa > 2:2469938/1‑93 (MQ=255)
ggATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCa > 1:4636247/1‑93 (MQ=255)
gATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAt < 2:4537977/93‑1 (MQ=255)
gATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAt > 1:256982/1‑93 (MQ=255)
gATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAt > 1:4241063/1‑93 (MQ=255)
aTGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAtt < 2:128089/93‑1 (MQ=255)
aTGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAtt < 2:4249744/93‑1 (MQ=255)
aTGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAtt < 1:3200908/93‑1 (MQ=255)
tGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAttt > 1:2288486/1‑93 (MQ=255)
tCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATttgtt < 1:431737/93‑1 (MQ=255)
ctgctgACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATttgttg < 2:1651828/93‑1 (MQ=255)
ctgACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGgcg > 2:3025821/1‑93 (MQ=255)
gACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCgca > 1:1549486/1‑93 (MQ=255)
aaTGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCgcagca < 1:3592213/93‑1 (MQ=255)
aaTGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCgcagca > 1:4195765/1‑93 (MQ=255)
aaTGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCgcagca > 1:144834/1‑93 (MQ=255)
aaTGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCgcagca < 1:2687586/93‑1 (MQ=255)
tgtgGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATg > 2:3136229/1‑93 (MQ=255)
tgtgGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATg > 1:3961541/1‑93 (MQ=255)
tgtgGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATg > 2:1708734/1‑93 (MQ=255)
gtgGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGa < 2:3747738/93‑1 (MQ=255)
gtgGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGa > 2:3195561/1‑93 (MQ=255)
tgGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGAt > 1:1232272/1‑93 (MQ=255)
gggCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGAtt > 1:3826635/1‑93 (MQ=255)
ggCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCCCTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTg < 2:2967510/93‑1 (MQ=255)
gCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTgg < 1:1627800/93‑1 (MQ=255)
|
TGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGTGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGG > NC_000913/3112086‑3112264
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGTGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGGGTAAC > NC_000913/3112084‑3112269
|
CCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCG > SRR4302535.1340835/1‑94 (MQ=60)
CCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCG > SRR4302535.2359494/1‑94 (MQ=60)
CCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCG > SRR4302535.3892514/1‑94 (MQ=60)
CTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGC > SRR4302535.1331967/1‑94 (MQ=60)
TGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCG > SRR4302535.659153/1‑94 (MQ=60)
CAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAAC < SRR4302535.1942282/94‑1 (MQ=60)
AGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACG > SRR4302535.3104287/1‑94 (MQ=60)
GTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGC > SRR4302535.2767113/1‑94 (MQ=60)
GTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGC > SRR4302535.4343408/1‑94 (MQ=60)
GCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGT < SRR4302535.3564814/94‑1 (MQ=60)
CCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGT < SRR4302535.3064100/94‑1 (MQ=60)
GGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAG > SRR4302535.2985867/1‑94 (MQ=60)
GCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGC < SRR4302535.2197652/94‑1 (MQ=60)
GCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGC < SRR4302535.4175361/94‑1 (MQ=60)
CAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCG < SRR4302535.3638233/94‑1 (MQ=60)
CGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAA > SRR4302535.1207052/1‑94 (MQ=60)
CGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAA > SRR4302535.4227909/1‑94 (MQ=60)
GCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAG > SRR4302535.303893/1‑94 (MQ=60)
GCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAG < SRR4302535.3842177/94‑1 (MQ=60)
GCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAG > SRR4302535.16817/1‑94 (MQ=60)
CCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGG > SRR4302535.2145491/1‑94 (MQ=60)
CCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGG < SRR4302535.401955/94‑1 (MQ=60)
CTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCT > SRR4302535.1396177/1‑94 (MQ=60)
TTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTGGCGCAAGGCTTA < SRR4302535.3322068/94‑1 (MQ=60)
TTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTA < SRR4302535.3991830/94‑1 (MQ=60)
TGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTAT < SRR4302535.3222596/94‑1 (MQ=60)
GAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATT < SRR4302535.835616/94‑1 (MQ=60)
CATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTT < SRR4302535.2220963/94‑1 (MQ=60)
AGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACT > SRR4302535.36463/1‑94 (MQ=60)
AGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACT > SRR4302535.1658415/1‑94 (MQ=60)
GCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTG > SRR4302535.3059825/1‑94 (MQ=60)
CCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGC > SRR4302535.1405884/1‑94 (MQ=60)
CAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCG < SRR4302535.2626280/94‑1 (MQ=60)
AGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGC > SRR4302535.2213763/1‑94 (MQ=60)
GAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCAC > SRR4302535.2208808/1‑94 (MQ=60)
AGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACT > SRR4302535.3471099/1‑94 (MQ=60)
ACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGA > SRR4302535.4672369/1‑94 (MQ=60)
ACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGA > SRR4302535.786109/1‑94 (MQ=60)
CAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGAC > SRR4302535.3958409/1‑94 (MQ=60)
AGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACA > SRR4302535.1930724/1‑94 (MQ=60)
CGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATT > SRR4302535.1534268/1‑94 (MQ=60)
CGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATT > SRR4302535.26424/1‑94 (MQ=60)
GGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTT < SRR4302535.991699/94‑1 (MQ=60)
GGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTT > SRR4302535.159934/1‑94 (MQ=60)
GGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTT < SRR4302535.221618/94‑1 (MQ=60)
GGAATATTGTCACGGATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTT > SRR4302535.1815971/1‑94 (MQ=60)
AATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCA < SRR4302535.2190760/94‑1 (MQ=60)
AATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCA < SRR4302535.2577276/94‑1 (MQ=60)
ATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCAC < SRR4302535.3040399/94‑1 (MQ=60)
TATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACC > SRR4302535.1956308/1‑94 (MQ=60)
TATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACC < SRR4302535.390065/94‑1 (MQ=60)
ATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCG > SRR4302535.2852989/1‑94 (MQ=60)
TGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTG > SRR4302535.4205122/1‑94 (MQ=60)
GTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGA > SRR4302535.1498053/1‑94 (MQ=60)
GTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGA > SRR4302535.3313613/1‑94 (MQ=60)
TCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAA > SRR4302535.2842011/1‑94 (MQ=60)
CGTATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACT > SRR4302535.127790/1‑94 (MQ=60)
ATCCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCG > SRR4302535.4207224/1‑94 (MQ=60)
CCGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCC < SRR4302535.1391715/94‑1 (MQ=60)
CGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCA < SRR4302535.4482089/94‑1 (MQ=60)
CGGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCA > SRR4302535.4667695/1‑94 (MQ=60)
GGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAT > SRR4302535.4270092/1‑94 (MQ=60)
GGATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCAT > SRR4302535.258753/1‑94 (MQ=60)
ATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTT < SRR4302535.3223070/94‑1 (MQ=60)
ATGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTT > SRR4302535.2304833/1‑94 (MQ=60)
TGGTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTG > SRR4302535.2381084/1‑94 (MQ=60)
GTCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTT < SRR4302535.4113358/94‑1 (MQ=60)
TCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTG < SRR4302535.3851730/94‑1 (MQ=60)
TCTGCTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTG < SRR4302535.434744/94‑1 (MQ=60)
CTGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGC > SRR4302535.2614944/1‑94 (MQ=60)
TGACAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCA > SRR4302535.1560649/1‑94 (MQ=60)
CAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCA > SRR4302535.2758714/1‑94 (MQ=60)
CAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCA > SRR4302535.145845/1‑94 (MQ=60)
CAATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCA > SRR4302535.4224480/1‑94 (MQ=60)
AATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCAT < SRR4302535.3617128/94‑1 (MQ=60)
AATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCAT < SRR4302535.2706796/94‑1 (MQ=60)
ATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATG > SRR4302535.4307176/1‑94 (MQ=60)
ATGTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATG > SRR4302535.3988595/1‑94 (MQ=60)
GTGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGAT > SRR4302535.1241084/1‑94 (MQ=60)
TGGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATT > SRR4302535.3853034/1‑94 (MQ=60)
GGGCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGGGCAGCATGATTG > SRR4302535.3831355/1‑94 (MQ=60)
GCAGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGGG < SRR4302535.1639551/94‑1 (MQ=60)
AGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGGGTA > SRR4302535.4449554/1‑94 (MQ=60)
AGCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGGGTA > SRR4302535.3165176/1‑94 (MQ=60)
GCGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGGGTAA < SRR4302535.142494/94‑1 (MQ=60)
CGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGGGTAAC < SRR4302535.2792827/94‑1 (MQ=60)
CGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGGGTAAC > SRR4302535.2570527/1‑94 (MQ=60)
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CCTGACAGTCGCGGCAGCGCCCTTTGAGCATCAGCCAGGAGAACAGCGGAATATTGTCACGTATCCGGATGGTCTGCTGACAATGTGGGCAGTGCGAACGCGGTAGCGCAAGGCTTATTTTTGACTGCGCACTCGACATTTCACCGTGAAACTCCGCCATTTGTTGGCGCAGCATGATTGGGTAAC > NC_000913/3112084‑3112269
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
