Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,141,722 |
A→G |
L153P (CTG→CCG) |
hybB ← |
putative cytochrome Ni/Fe component of hydrogenase‑2 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,141,722 | 0 | A | G | 100.0%
| 576.6
/ NA
| 183 | L153P (CTG→CCG) | hybB | putative cytochrome Ni/Fe component of hydrogenase‑2 |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (81/102); total (81/102) |
Only 100 of 186 total aligned reads displayed.
ATGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACAGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGTGA > NC_000913/3141632‑3141811
|
tGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTg > 2:2739549/1‑93 (MQ=255)
ggTCGGCAGCAGCGCACCGAGCGGGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGc < 2:1312149/93‑1 (MQ=255)
ggTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGc < 2:193691/93‑1 (MQ=255)
gTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGcc < 2:3942706/93‑1 (MQ=255)
gTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGcc < 1:3968968/93‑1 (MQ=255)
gTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGcc < 2:4497849/93‑1 (MQ=255)
cGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCCTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCgg > 1:3690015/1‑93 (MQ=255)
gcagcaGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAg > 2:788988/1‑93 (MQ=255)
gcagcGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCaa > 2:1836943/1‑93 (MQ=255)
agcGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAAc < 1:2683911/93‑1 (MQ=255)
agcGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAAc < 2:2428954/93‑1 (MQ=255)
gcACCGAGCGCGATGATGAATAACATCACCTTGTTTAGTCGCTGTAGCGCCACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTcc < 1:162865/93‑1 (MQ=255)
gcACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTcc < 2:896552/93‑1 (MQ=255)
cACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCa < 1:4043188/93‑1 (MQ=255)
aCCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAg > 2:1119649/1‑93 (MQ=255)
aCCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAg < 2:3431648/93‑1 (MQ=255)
ccGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGt > 1:2456325/1‑93 (MQ=255)
cGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTg < 1:1162436/93‑1 (MQ=255)
cgcgATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCAt > 2:2000447/1‑93 (MQ=255)
cgATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCa < 2:507515/93‑1 (MQ=255)
caatgatgAAGAACATCCCCTTGTTAAGTCGCTATAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCa < 1:3582271/91‑1 (MQ=255)
gatgatGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCAc > 1:2395295/1‑93 (MQ=255)
gatgatGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCAc > 1:3859542/1‑93 (MQ=255)
gatgaAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGcc > 1:1546899/1‑93 (MQ=255)
tgaAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACATTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGa < 1:2923415/93‑1 (MQ=255)
aagaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGata < 2:2498120/93‑1 (MQ=255)
aagaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGata > 1:2656549/1‑93 (MQ=255)
agaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGatat > 1:3129709/1‑93 (MQ=255)
agaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGatat < 1:1138861/93‑1 (MQ=255)
agaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGatat < 2:4662503/93‑1 (MQ=255)
agaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGatat < 2:2829038/93‑1 (MQ=255)
gaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGAtata < 2:1850723/93‑1 (MQ=255)
gaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGAtata < 2:4403593/93‑1 (MQ=255)
gaaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGACGAtata > 1:41833/1‑93 (MQ=255)
aaCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAg < 1:1768681/93‑1 (MQ=255)
aCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGa < 1:3803959/93‑1 (MQ=255)
aCATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGa > 2:3754694/1‑93 (MQ=255)
cATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGAt > 1:2646657/1‑93 (MQ=255)
aTCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATg < 2:3703612/93‑1 (MQ=255)
tCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATgg > 2:2688648/1‑93 (MQ=255)
tCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATgg < 2:1423986/93‑1 (MQ=255)
tCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATgg < 2:218005/93‑1 (MQ=255)
aCCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTc > 2:2236579/1‑93 (MQ=255)
ccTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCa > 2:3005836/1‑93 (MQ=255)
ccTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCAATCACGCCGATATAGATGGTCa > 1:2074978/1‑93 (MQ=255)
ttGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATa > 1:2122042/1‑93 (MQ=255)
ttGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATa > 2:489443/1‑93 (MQ=255)
ttGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATa > 2:3160914/1‑93 (MQ=255)
tttAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAg > 2:1483684/1‑93 (MQ=255)
tAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAACCTCCAGTGCCATCACGCCGATATAGATGGTCATACAGAc < 2:2590845/93‑1 (MQ=255)
tAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGAc < 2:1879998/93‑1 (MQ=255)
tAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGAc < 2:122901/93‑1 (MQ=255)
tAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGAc < 1:2019896/93‑1 (MQ=255)
tAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGAc < 1:3853755/93‑1 (MQ=255)
aGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGAcc < 1:3089146/93‑1 (MQ=255)
gTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGAccg > 2:524498/1‑93 (MQ=255)
tCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGAccgc < 2:3924491/93‑1 (MQ=255)
gTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGtct > 1:3706980/1‑93 (MQ=255)
tAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGtctc > 2:407869/1‑93 (MQ=255)
gCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGa > 1:4270603/1‑93 (MQ=255)
gCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGa < 2:695398/93‑1 (MQ=255)
gCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGa > 2:3436906/1‑93 (MQ=255)
cGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGaa > 2:3861287/1‑93 (MQ=255)
gACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAAc > 1:2355211/1‑93 (MQ=255)
cacCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAg < 1:2564439/93‑1 (MQ=255)
cacCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAg < 2:4619754/93‑1 (MQ=255)
cccTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGt < 2:2684864/92‑1 (MQ=255)
acCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGt > 2:3087369/1‑93 (MQ=255)
ccTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTa < 1:448991/93‑1 (MQ=255)
ccTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTa < 1:894596/93‑1 (MQ=255)
cTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTAc < 1:3921943/93‑1 (MQ=255)
cTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTAc < 2:2926445/93‑1 (MQ=255)
ttCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTAcc > 2:133614/1‑93 (MQ=255)
ttCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACAGCCGTCTCGAACAGTAcc > 2:1957343/1‑93 (MQ=255)
tCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCg > 2:3338869/1‑93 (MQ=255)
ccACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGa < 2:3404589/93‑1 (MQ=255)
cACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAg < 1:4126798/93‑1 (MQ=255)
cccccAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGt < 1:2794322/92‑1 (MQ=255)
cccccAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGt < 1:1400818/92‑1 (MQ=255)
aCCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGt > 1:24711/1‑93 (MQ=255)
aCCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGt > 1:4420903/1‑93 (MQ=255)
ccccAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGtt > 2:1546592/1‑93 (MQ=255)
cccAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTc > 2:353219/1‑93 (MQ=255)
ccAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCa < 1:3293891/93‑1 (MQ=255)
ccAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCa > 1:1344413/1‑93 (MQ=255)
ccAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCa < 1:3559812/93‑1 (MQ=255)
aGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACg > 2:867844/1‑93 (MQ=255)
gACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGt > 2:2579826/1‑93 (MQ=255)
gACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGt > 2:4023884/1‑93 (MQ=255)
gACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGt < 1:325278/93‑1 (MQ=255)
gTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGa < 1:1760065/93‑1 (MQ=255)
gTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGa < 1:1850755/93‑1 (MQ=255)
tCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAg > 2:918508/1‑93 (MQ=255)
tCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAg < 1:2335417/93‑1 (MQ=255)
tCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAg < 1:555125/93‑1 (MQ=255)
tCAAACGGTGCCGGAGCAAACCCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAg < 1:73170/93‑1 (MQ=255)
cAAACGGTGCCGGAGCAATCTCCAGTGCCATCACGCCGATATAGATGGTCATACAGGCCGCCGTCGCGAACAGTACCGAGTTCACGTTGAAGt < 1:1119649/93‑1 (MQ=255)
cAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGt > 1:458080/1‑93 (MQ=255)
aaCGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGTGa < 1:2261177/93‑1 (MQ=255)
aaCGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTAACGTTGAAGGGa > 1:3438300/1‑93 (MQ=255)
|
ATGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACAGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGTGA > NC_000913/3141632‑3141811
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCATGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACAGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGTGAC > NC_000913/3141629‑3141812
|
TGCATGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACG > SRR4302535.855072/1‑94 (MQ=60)
GCATGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGG < SRR4302535.945500/94‑1 (MQ=60)
CATGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGT < SRR4302535.3041715/94‑1 (MQ=60)
TGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGC < SRR4302535.3261989/94‑1 (MQ=60)
GTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCG < SRR4302535.3996076/94‑1 (MQ=60)
GTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCG < SRR4302535.4687921/94‑1 (MQ=60)
TCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGG > SRR4302535.736911/1‑94 (MQ=60)
TCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCCTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGG > SRR4302535.3715554/1‑94 (MQ=60)
GGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAG > SRR4302535.189225/1‑94 (MQ=60)
GGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAG < SRR4302535.1156138/94‑1 (MQ=60)
GGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCAGGAG > SRR4302535.2792130/1‑94 (MQ=60)
CAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTAGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCA > SRR4302535.2411118/1‑94 (MQ=60)
AGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAA < SRR4302535.1664373/94‑1 (MQ=60)
AGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAA < SRR4302535.138326/94‑1 (MQ=60)
AGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACT < SRR4302535.2703104/94‑1 (MQ=60)
AGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACT < SRR4302535.261348/94‑1 (MQ=60)
CGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCC < SRR4302535.4153440/94‑1 (MQ=60)
GCACCGAGCGCGATGATGAATAACATCACCTTGTTTAGTCGCTGTAGCGCCACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCA < SRR4302535.164003/94‑1 (MQ=60)
CACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAG < SRR4302535.4070865/94‑1 (MQ=60)
ACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGT > SRR4302535.2474038/1‑94 (MQ=60)
ACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGT < SRR4302535.3312648/94‑1 (MQ=60)
CGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGC < SRR4302535.1170743/94‑1 (MQ=60)
AGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCA < SRR4302535.3838699/94‑1 (MQ=60)
CGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATC > SRR4302535.3993714/1‑94 (MQ=60)
GCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCA > SRR4302535.4035491/1‑94 (MQ=60)
CGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCAC > SRR4302535.3886106/1‑94 (MQ=60)
CGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCAC > SRR4302535.2412509/1‑94 (MQ=60)
CAATGATGAAGAACATCCCCTTGTTAAGTCGCTATAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCAC < SRR4302535.3607118/94‑1 (MQ=60)
GATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACG < SRR4302535.2339701/94‑1 (MQ=60)
ATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGC > SRR4302535.2510467/1‑94 (MQ=60)
TGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCC > SRR4302535.1558040/1‑94 (MQ=60)
ATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGA > SRR4302535.1433026/1‑94 (MQ=60)
TGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACATTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGAT < SRR4302535.2944030/94‑1 (MQ=60)
GAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATA > SRR4302535.2675583/1‑94 (MQ=60)
AAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATAT > SRR4302535.3576719/1‑94 (MQ=60)
AAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATAT > SRR4302535.3151506/1‑94 (MQ=60)
AAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATAT > SRR4302535.266734/1‑94 (MQ=60)
AGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATA < SRR4302535.1146979/94‑1 (MQ=60)
AGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGACGATATA > SRR4302535.42151/1‑94 (MQ=60)
AACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGA < SRR4302535.1781504/94‑1 (MQ=60)
AACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGA > SRR4302535.3059744/1‑94 (MQ=60)
ACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGAT > SRR4302535.2665614/1‑94 (MQ=60)
ACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGAT < SRR4302535.3830182/94‑1 (MQ=60)
CATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATG > SRR4302535.3890213/1‑94 (MQ=60)
ctcacctttgTTAGTCGCTGTAGCCACCACTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGG < SRR4302535.4499323/84‑1 (MQ=60)
TCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGT > SRR4302535.2475206/1‑94 (MQ=60)
CACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTC > SRR4302535.3775376/1‑94 (MQ=60)
ACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCA > SRR4302535.206832/1‑94 (MQ=60)
ACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCAATCACGCCGATATAGATGGTCA > SRR4302535.2089925/1‑94 (MQ=60)
CTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATA > SRR4302535.2137342/1‑94 (MQ=60)
TAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACC < SRR4302535.2034458/94‑1 (MQ=60)
TAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACC < SRR4302535.3880295/94‑1 (MQ=60)
AGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCG < SRR4302535.2852729/94‑1 (MQ=60)
AGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCG < SRR4302535.3110661/94‑1 (MQ=60)
AGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCG < SRR4302535.3590363/94‑1 (MQ=60)
GCTGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGT > SRR4302535.2119236/1‑94 (MQ=60)
TGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCT > SRR4302535.3732647/1‑94 (MQ=60)
TGTAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCT < SRR4302535.3616367/94‑1 (MQ=60)
TAGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCG < SRR4302535.2433212/94‑1 (MQ=60)
AGCGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGA > SRR4302535.4299839/1‑94 (MQ=60)
CGACACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAAC > SRR4302535.2372100/1‑94 (MQ=60)
ACCCCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAG < SRR4302535.3726308/94‑1 (MQ=60)
CACCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGT < SRR4302535.2582896/94‑1 (MQ=60)
CCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTAC < SRR4302535.452136/94‑1 (MQ=60)
CCTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTAC < SRR4302535.900941/94‑1 (MQ=60)
CTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACC < SRR4302535.3948754/94‑1 (MQ=60)
CTTCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACC < SRR4302535.1802258/94‑1 (MQ=60)
TCCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGA > SRR4302535.2142470/1‑94 (MQ=60)
CCACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAG < SRR4302535.4220302/94‑1 (MQ=60)
CACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGT > SRR4302535.24902/1‑94 (MQ=60)
CACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGT > SRR4302535.4451175/1‑94 (MQ=60)
CACCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGT < SRR4302535.4155037/94‑1 (MQ=60)
CCCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTT < SRR4302535.1410814/94‑1 (MQ=60)
CCCCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTT < SRR4302535.2814202/94‑1 (MQ=60)
CCCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCA > SRR4302535.1354011/1‑94 (MQ=60)
CCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCAC < SRR4302535.3584497/94‑1 (MQ=60)
CCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCAC < SRR4302535.313711/94‑1 (MQ=60)
CCAGACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCAC < SRR4302535.3316789/94‑1 (MQ=60)
GACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTT < SRR4302535.4187446/94‑1 (MQ=60)
GACGTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTT < SRR4302535.327529/94‑1 (MQ=60)
GTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAA < SRR4302535.1772807/94‑1 (MQ=60)
GTTCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAA < SRR4302535.1864093/94‑1 (MQ=60)
TCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACTGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGT < SRR4302535.4600213/94‑1 (MQ=60)
TCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGT > SRR4302535.122637/1‑94 (MQ=60)
TCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGT < SRR4302535.2352131/94‑1 (MQ=60)
TCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGT > SRR4302535.461286/1‑94 (MQ=60)
TCAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGT < SRR4302535.559015/94‑1 (MQ=60)
TCAAACGGTGCCGGAGCAAACCCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGT < SRR4302535.73701/94‑1 (MQ=60)
CAAACGGTGCCGGAGCAATCTCCAGTGCCATCACGCCGATATAGATGGTCATACAGGCCGCCGTCGCGAACAGTACCGAGTTCACGTTGAAGTG < SRR4302535.1127634/94‑1 (MQ=60)
CAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGTG < SRR4302535.598610/94‑1 (MQ=60)
CAAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGTG < SRR4302535.162534/94‑1 (MQ=60)
AAACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTAACGTTGAAGGGA > SRR4302535.3462215/1‑94 (MQ=60)
AACGGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGTGAC < SRR4302535.2277285/94‑1 (MQ=60)
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TGCATGGTCGGCAGCAGCGCACCGAGCGCGATGATGAAGAACATCACCTTGTTTAGTCGCTGTAGCGACACCTTCCACCCCAGACGTTCAAACAGTGCCGGAGCAAACTCCAGTGCCATCACGCCGATATAGATGGTCATACAGACCGCCGTCTCGAACAGTACCGAGTTCACGTTGAAGTGAC > NC_000913/3141629‑3141812
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
