Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,145,571 A→G intergenic (‑819/‑341) b2998 ← / → b3001 hypothetical protein/putative reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,145,5710AG100.0% 1086.6 / NA 336intergenic (‑819/‑341)b2998/b3001hypothetical protein/putative reductase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (158/178);  total (158/178)

Only 100 of 343 total aligned reads displayed.

TTGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAACTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGG  >  NC_000913/3145481‑3145660
                                                                                          |                                                                                         
ttGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGct                                                                                         <  2:6478170/93‑1 (MQ=255)
 tGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGctc                                                                                        <  2:1354834/93‑1 (MQ=255)
 tGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGctc                                                                                        <  2:6226474/93‑1 (MQ=255)
    gggCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTAc                                                                                     <  2:4060921/93‑1 (MQ=255)
     ggCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTAcc                                                                                    <  1:6635558/93‑1 (MQ=255)
     ggCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTAcc                                                                                    >  1:5335390/1‑93 (MQ=255)
     ggCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTAcc                                                                                    >  2:1807323/1‑93 (MQ=255)
      gCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCt                                                                                   >  2:6267509/1‑93 (MQ=255)
       cTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTg                                                                                  <  1:7108750/93‑1 (MQ=255)
        ttCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGa                                                                                 >  2:5755009/1‑93 (MQ=255)
         tCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAg                                                                                >  2:5144498/1‑93 (MQ=255)
          cACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGt                                                                               <  2:2044817/93‑1 (MQ=255)
             cAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGc                                                                            >  1:2136787/1‑93 (MQ=255)
             cAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGc                                                                            <  2:5449125/93‑1 (MQ=255)
              aGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGcc                                                                           >  1:1257210/1‑93 (MQ=255)
               gATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCa                                                                          >  2:4830905/1‑93 (MQ=255)
               gATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCa                                                                          >  2:2266548/1‑93 (MQ=255)
               gATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCa                                                                          <  1:454902/93‑1 (MQ=255)
                aTAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAg                                                                         >  2:4553038/1‑93 (MQ=255)
                   aCCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAgcgc                                                                      >  2:413036/1‑93 (MQ=255)
                      ccGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATa                                                                   <  2:5869471/93‑1 (MQ=255)
                      ccGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATa                                                                   >  2:3581505/1‑93 (MQ=255)
                       cGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATaa                                                                  <  1:3396421/93‑1 (MQ=255)
                        gCACCTCGCCGTGACCATTTGGCGAAGGATCCGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAt                                                                 <  2:4889939/93‑1 (MQ=255)
                        cccccTCGCCTTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAt                                                                 <  2:1643637/90‑1 (MQ=255)
                         cACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAtt                                                                >  1:7935735/1‑93 (MQ=255)
                          cccTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAttt                                                               <  2:6751342/92‑1 (MQ=255)
                           ccTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTg                                                              >  2:537742/1‑93 (MQ=255)
                           ccTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTg                                                              <  2:4398249/93‑1 (MQ=255)
                           ccTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTg                                                              <  1:2672456/93‑1 (MQ=255)
                            cTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTgg                                                             >  1:1968694/1‑93 (MQ=255)
                            cTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGAGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTgg                                                             >  1:1685248/1‑93 (MQ=255)
                             tCGCCGTGACCATTTGGCGAATGATACGTGATGTAATCAGCAACAATTTCCGGATCGGGATGCTCTACCTGAATCGCCACCGCATAACTTGGc                                                            >  2:7079271/1‑93 (MQ=255)
                             tCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGc                                                            >  2:6062837/1‑93 (MQ=255)
                              cGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCt                                                           >  1:4306869/1‑93 (MQ=255)
                               gCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCtt                                                          <  2:1433609/93‑1 (MQ=255)
                                ccGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTg                                                         >  2:2136211/1‑93 (MQ=255)
                                ccGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTg                                                         >  1:3642332/1‑93 (MQ=255)
                                ccGTGACCATTTCGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTg                                                         >  2:5035744/1‑93 (MQ=255)
                                 cGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGa                                                        <  1:6149816/93‑1 (MQ=255)
                                 cGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGa                                                        <  2:3610895/93‑1 (MQ=255)
                                  gTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAg                                                       <  1:7709174/93‑1 (MQ=255)
                                  gTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGAATAATTTGGCTTGAg                                                       >  2:4535986/1‑93 (MQ=255)
                                   tGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGc                                                      <  2:431164/93‑1 (MQ=255)
                                    gACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCa                                                     <  1:6808563/93‑1 (MQ=255)
                                    gACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCa                                                     >  2:5201462/1‑93 (MQ=255)
                                     aCCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCaa                                                    <  1:3219480/93‑1 (MQ=255)
                                      ccATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCaaa                                                   <  1:1062422/93‑1 (MQ=255)
                                      ccATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCaaa                                                   >  2:5610001/1‑93 (MQ=255)
                                      ccATGTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCGCTACCTGAGCCGCCAGCCCATAATTTGGCTTGAGCaaa                                                   <  1:2169749/93‑1 (MQ=255)
                                         tttGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCa                                                >  1:5931448/1‑93 (MQ=255)
                                           tGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCaaa                                              <  1:5597285/93‑1 (MQ=255)
                                           tGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCaaa                                              <  1:1853563/93‑1 (MQ=255)
                                            ggCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAaac                                             <  2:3318804/93‑1 (MQ=255)
                                            ggCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAaac                                             <  2:5704554/93‑1 (MQ=255)
                                             gCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAaaca                                            <  2:3811201/93‑1 (MQ=255)
                                              cGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAaacaa                                           <  2:7901269/93‑1 (MQ=255)
                                               gAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAaacaac                                          <  1:5821188/93‑1 (MQ=255)
                                               gAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAaacaac                                          <  2:6587610/93‑1 (MQ=255)
                                                aaGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACg                                         >  2:6967393/1‑93 (MQ=255)
                                                aaGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACg                                         >  1:2999031/1‑93 (MQ=255)
                                                   gATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTa                                      >  2:6867031/1‑93 (MQ=255)
                                                   gATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTa                                      >  1:5973759/1‑93 (MQ=255)
                                                    aTACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTaa                                     <  2:7318506/93‑1 (MQ=255)
                                                    aTACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTaa                                     <  1:6074576/93‑1 (MQ=255)
                                                    aTACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTaa                                     <  1:3725393/93‑1 (MQ=255)
                                                     tACGTGATGTACTCAGCAACGATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAt                                    >  2:7616773/1‑93 (MQ=255)
                                                     tACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAt                                    >  1:1639354/1‑93 (MQ=255)
                                                     tACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAt                                    >  1:4399400/1‑93 (MQ=255)
                                                      aCGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATg                                   <  1:4892715/93‑1 (MQ=255)
                                                      aCGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATg                                   <  1:6417802/93‑1 (MQ=255)
                                                        gTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGcc                                 >  1:2396642/1‑93 (MQ=255)
                                                        gTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGcc                                 <  1:4146864/93‑1 (MQ=255)
                                                        gTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGcc                                 <  1:5201463/93‑1 (MQ=255)
                                                          gATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGt                               <  2:544656/93‑1 (MQ=255)
                                                          gATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGt                               >  1:506693/1‑93 (MQ=255)
                                                            tGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCa                             <  1:3908820/93‑1 (MQ=255)
                                                            tGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCa                             <  1:4955690/93‑1 (MQ=255)
                                                               aCTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATcc                          <  1:1016616/93‑1 (MQ=255)
                                                                cTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATccc                         <  1:6964674/93‑1 (MQ=255)
                                                                   aGCAACACTTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGcc                      <  2:1055811/93‑1 (MQ=255)
                                                                   aGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGcc                      <  1:6355707/93‑1 (MQ=255)
                                                                     caacaaTTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTa                    <  2:7168593/93‑1 (MQ=255)
                                                                      aacaaTTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTAc                   >  2:1124808/1‑93 (MQ=255)
                                                                      aacaaTTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTAc                   <  1:2777152/93‑1 (MQ=255)
                                                                       acaaTTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTAcc                  <  1:3760732/93‑1 (MQ=255)
                                                                       acaaTTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTAcc                  <  2:3086915/93‑1 (MQ=255)
                                                                       acaaTTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTAcc                  <  1:736458/93‑1 (MQ=255)
                                                                        caaTTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCg                 >  1:1879454/1‑93 (MQ=255)
                                                                            ttCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACt             <  1:937064/93‑1 (MQ=255)
                                                                              ccGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTc           >  1:7504164/1‑93 (MQ=255)
                                                                              ccGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTc           >  2:7373429/1‑93 (MQ=255)
                                                                                gggTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTcgc         >  2:2615681/1‑93 (MQ=255)
                                                                                 ggTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTcgcc        >  1:3882339/1‑93 (MQ=255)
                                                                                  gTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTcgccg       >  1:7787363/1‑93 (MQ=255)
                                                                                   tCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTcgccgc      <  2:2762946/93‑1 (MQ=255)
                                                                                    cGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCa     >  2:5343027/1‑93 (MQ=255)
                                                                                     ggTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCaa    >  1:57192/1‑93 (MQ=255)
                                                                                      gTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAg   >  2:4225075/1‑93 (MQ=255)
                                                                                      gTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAg   <  1:5458732/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAACTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGG  >  NC_000913/3145481‑3145660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCTTTGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAACTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGTTGA  >  NC_000913/3145478‑3145664
                                                                                             |                                                                                             
TCTTTGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAG                                                                                               <  SRR4302543.1149038/94‑1 (MQ=60)
 CTTTGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGC                                                                                              >  SRR4302543.319755/1‑94 (MQ=60)
   TTGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTC                                                                                            >  SRR4302543.1426915/1‑94 (MQ=60)
      CGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTAC                                                                                         >  SRR4302543.1662892/1‑94 (MQ=60)
      CGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTAC                                                                                         >  SRR4302543.6008743/1‑94 (MQ=60)
       GGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACC                                                                                        >  SRR4302543.5383643/1‑94 (MQ=60)
        GGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCT                                                                                       <  SRR4302543.2562542/94‑1 (MQ=60)
        GGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCT                                                                                       <  SRR4302543.6698171/94‑1 (MQ=60)
        GGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCT                                                                                       >  SRR4302543.1810869/1‑94 (MQ=60)
          CTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGA                                                                                     <  SRR4302543.1980262/94‑1 (MQ=60)
          CTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGA                                                                                     <  SRR4302543.7177812/94‑1 (MQ=60)
           TTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAG                                                                                    <  SRR4302543.5085357/94‑1 (MQ=60)
             CACCAGATAACCCCGCGCCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTC                                                                                  <  SRR4302543.7958539/94‑1 (MQ=60)
             CACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTC                                                                                  <  SRR4302543.779574/94‑1 (MQ=60)
               CCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGC                                                                                >  SRR4302543.5660753/1‑94 (MQ=60)
               CCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGC                                                                                >  SRR4302543.2941456/1‑94 (MQ=60)
               CCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGC                                                                                >  SRR4302543.2155910/1‑94 (MQ=60)
                CAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCC                                                                               <  SRR4302543.5366923/94‑1 (MQ=60)
                CAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCC                                                                               >  SRR4302543.1268467/1‑94 (MQ=60)
                 AGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCG                                                                              >  SRR4302543.5991082/1‑94 (MQ=60)
                 AGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCA                                                                              >  SRR4302543.3333399/1‑94 (MQ=60)
                 AGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCA                                                                              >  SRR4302543.3151756/1‑94 (MQ=60)
                 AGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCA                                                                              >  SRR4302543.5556269/1‑94 (MQ=60)
                 AGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCA                                                                              >  SRR4302543.5175155/1‑94 (MQ=60)
                 AGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCA                                                                              >  SRR4302543.3934992/1‑94 (MQ=60)
                 AGATAACCCCCCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCA                                                                              <  SRR4302543.2010554/94‑1 (MQ=60)
                  GATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAG                                                                             <  SRR4302543.459136/94‑1 (MQ=60)
                    TAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCG                                                                           <  SRR4302543.5154044/94‑1 (MQ=60)
                       CCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCAT                                                                        >  SRR4302543.4573869/1‑94 (MQ=60)
                       CCCCGCACCTCGCCGTGAACATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCAT                                                                        <  SRR4302543.3293128/94‑1 (MQ=60)
                        CCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATA                                                                       >  SRR4302543.3069043/1‑94 (MQ=60)
                        CCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATA                                                                       <  SRR4302543.7580301/94‑1 (MQ=60)
                        CCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATA                                                                       >  SRR4302543.6317122/1‑94 (MQ=60)
                         CCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAA                                                                      >  SRR4302543.5934368/1‑94 (MQ=60)
                         CCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAA                                                                      <  SRR4302543.5787104/94‑1 (MQ=60)
                          CGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTGAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAT                                                                     <  SRR4302543.4016526/94‑1 (MQ=60)
                          CGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAT                                                                     <  SRR4302543.3426861/94‑1 (MQ=60)
                          CGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAT                                                                     <  SRR4302543.4102549/94‑1 (MQ=60)
                          CGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAT                                                                     <  SRR4302543.4971462/94‑1 (MQ=60)
                          CGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAT                                                                     >  SRR4302543.1243878/1‑94 (MQ=60)
                          CGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAAT                                                                     <  SRR4302543.2732297/94‑1 (MQ=60)
                          CGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCAAGCGCATAAT                                                                     >  SRR4302543.1002934/1‑94 (MQ=60)
                           GCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATT                                                                    <  SRR4302543.821891/94‑1 (MQ=60)
                           GCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATT                                                                    >  SRR4302543.8010223/1‑94 (MQ=60)
                             CCCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTG                                                                  <  SRR4302543.2616811/94‑1 (MQ=60)
                             CCCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTG                                                                  <  SRR4302543.477030/94‑1 (MQ=60)
                             ACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTG                                                                  <  SRR4302543.481919/94‑1 (MQ=60)
                              CCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGG                                                                 >  SRR4302543.6222982/1‑94 (MQ=60)
                              CCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGG                                                                 <  SRR4302543.2696688/94‑1 (MQ=60)
                              CCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGG                                                                 <  SRR4302543.6308600/94‑1 (MQ=60)
                              CCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGG                                                                 >  SRR4302543.1986338/1‑94 (MQ=60)
                              CCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGAGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGG                                                                 >  SRR4302543.1700386/1‑94 (MQ=60)
                               CTCGCGGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGC                                                                >  SRR4302543.3749971/1‑94 (MQ=60)
                               CTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACACTTTCCGGGTCGTTAAGCTCAATTTGAGTCGCTAGCGCATAATTTGGT                                                                >  SRR4302543.2701786/1‑94 (MQ=60)
                               CTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGC                                                                >  SRR4302543.3778245/1‑94 (MQ=60)
                               CTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGC                                                                >  SRR4302543.6181292/1‑94 (MQ=60)
                               CTCGCCGTGAACATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGACTCGCCAGCGCATAATTTGGC                                                                >  SRR4302543.2701787/1‑94 (MQ=60)
                                TCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCT                                                               >  SRR4302543.4345999/1‑94 (MQ=60)
                                 CGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTT                                                              >  SRR4302543.3032968/1‑94 (MQ=60)
                                  GCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTG                                                             >  SRR4302543.3674371/1‑94 (MQ=60)
                                    CGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAG                                                           <  SRR4302543.4968214/94‑1 (MQ=60)
                                    CGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAG                                                           <  SRR4302543.6208050/94‑1 (MQ=60)
                                    CGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAG                                                           <  SRR4302543.1681852/94‑1 (MQ=60)
                                     GTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGC                                                          >  SRR4302543.641592/1‑94 (MQ=60)
                                     GTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGC                                                          <  SRR4302543.7782102/94‑1 (MQ=60)
                                     GTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGC                                                          >  SRR4302543.6167998/1‑94 (MQ=60)
                                      TGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCA                                                         >  SRR4302543.6422026/1‑94 (MQ=60)
                                       GACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGGGCAA                                                        >  SRR4302543.81904/1‑94 (MQ=60)
                                       GACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAA                                                        <  SRR4302543.6872848/94‑1 (MQ=60)
                                       GACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAA                                                        <  SRR4302543.5771969/94‑1 (MQ=60)
                                        ACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAA                                                       <  SRR4302543.3692434/94‑1 (MQ=60)
                                        ACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAA                                                       <  SRR4302543.3248569/94‑1 (MQ=60)
                                         CCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAAT                                                      <  SRR4302543.6117349/94‑1 (MQ=60)
                                         CCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAAT                                                      <  SRR4302543.1071962/94‑1 (MQ=60)
                                         CCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAAT                                                      >  SRR4302543.5110209/1‑94 (MQ=60)
                                         CCATGTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCGCTACCTGAGCCGCCAGCCCATAATTTGGCTTGAGCAAAT                                                      <  SRR4302543.2189186/94‑1 (MQ=60)
                                          CATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATC                                                     <  SRR4302543.4444683/94‑1 (MQ=60)
                                           ATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCA                                                    >  SRR4302543.5985683/1‑94 (MQ=60)
                                             TTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAA                                                  >  SRR4302543.5339973/1‑94 (MQ=60)
                                             TTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAA                                                  <  SRR4302543.2412499/94‑1 (MQ=60)
                                              TGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAAC                                                 <  SRR4302543.1870228/94‑1 (MQ=60)
                                              TGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAAC                                                 <  SRR4302543.7487318/94‑1 (MQ=60)
                                              TGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAAC                                                 <  SRR4302543.5648280/94‑1 (MQ=60)
                                              TGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAAC                                                 <  SRR4302543.3895515/94‑1 (MQ=60)
                                              TGGCGAAGGATACGTGATGTACTCAGCAACAAGTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAAC                                                 <  SRR4302543.1870229/94‑1 (MQ=60)
                                               GGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACA                                                <  SRR4302543.7793523/94‑1 (MQ=60)
                                                GCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAA                                               >  SRR4302543.5194270/1‑94 (MQ=60)
                                                GCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAA                                               <  SRR4302543.7996673/94‑1 (MQ=60)
                                                 CGAAGTATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAAC                                              <  SRR4302543.6544393/94‑1 (MQ=60)
                                                 CGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAAC                                              <  SRR4302543.2988046/94‑1 (MQ=60)
                                                 CGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAAC                                              <  SRR4302543.3676420/94‑1 (MQ=60)
                                                 CGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAAC                                              <  SRR4302543.6756539/94‑1 (MQ=60)
                                                  GAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACG                                             >  SRR4302543.3026225/1‑94 (MQ=60)
                                                  GAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACG                                             <  SRR4302543.5874125/94‑1 (MQ=60)
                                                  GAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACG                                             <  SRR4302543.2160831/94‑1 (MQ=60)
                                                  GAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACG                                             <  SRR4302543.2160830/94‑1 (MQ=60)
                                                   AAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGC                                            >  SRR4302543.6010545/1‑94 (MQ=60)
                                                    AGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCT                                           <  SRR4302543.7260518/94‑1 (MQ=60)
                                                     agatgCGTGATGGACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTA                                          <  SRR4302543.1402677/89‑1 (MQ=60)
                                                     GGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTA                                          >  SRR4302543.6028476/1‑94 (MQ=60)
                                                     GGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTA                                          >  SRR4302543.5599941/1‑94 (MQ=60)
                                                      GATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAA                                         >  SRR4302543.4485183/1‑94 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        <  SRR4302543.6132148/94‑1 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        >  SRR4302543.5746737/1‑94 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        <  SRR4302543.6102909/94‑1 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        <  SRR4302543.967256/94‑1 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        <  SRR4302543.3758151/94‑1 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        <  SRR4302543.1913820/94‑1 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        >  SRR4302543.4126353/1‑94 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        <  SRR4302543.1903194/94‑1 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        >  SRR4302543.1653975/1‑94 (MQ=60)
                                                       ATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        >  SRR4302543.4439278/1‑94 (MQ=60)
                                                       ATACATGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAAT                                        <  SRR4302543.7292450/94‑1 (MQ=60)
                                                        TACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATG                                       <  SRR4302543.6912032/94‑1 (MQ=60)
                                                         ACGTGATGTACTCAGCGACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGC                                      >  SRR4302543.4383749/1‑94 (MQ=60)
                                                         ACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGC                                      <  SRR4302543.4937318/94‑1 (MQ=60)
                                                         ACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGC                                      <  SRR4302543.6478255/94‑1 (MQ=60)
                                                         ACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGC                                      >  SRR4302543.747811/1‑94 (MQ=60)
                                                          CGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCC                                     >  SRR4302543.2418320/1‑94 (MQ=60)
                                                          CGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCC                                     <  SRR4302543.7796731/94‑1 (MQ=60)
                                                           GTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCG                                    <  SRR4302543.4184349/94‑1 (MQ=60)
                                                           GTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCG                                    <  SRR4302543.5248358/94‑1 (MQ=60)
                                                           GTGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCG                                    <  SRR4302543.7458326/94‑1 (MQ=60)
                                                            TGATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGT                                   >  SRR4302543.511403/1‑94 (MQ=60)
                                                              ATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCA                                 >  SRR4302543.4959811/1‑94 (MQ=60)
                                                              ATGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCA                                 >  SRR4302543.7128139/1‑94 (MQ=60)
                                                               TGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCAT                                <  SRR4302543.5000815/94‑1 (MQ=60)
                                                               TGTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCAT                                <  SRR4302543.3943332/94‑1 (MQ=60)
                                                                GTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATC                               <  SRR4302543.5474713/94‑1 (MQ=60)
                                                                GTACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATC                               >  SRR4302543.1892011/1‑94 (MQ=60)
                                                                  ACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCC                             <  SRR4302543.1731427/94‑1 (MQ=60)
                                                                  ACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCC                             >  SRR4302543.7085987/1‑94 (MQ=60)
                                                                  ACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCC                             <  SRR4302543.1025608/94‑1 (MQ=60)
                                                                  ACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCC                             <  SRR4302543.7624993/94‑1 (MQ=60)
                                                                  ACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCC                             >  SRR4302543.4262918/1‑94 (MQ=60)
                                                                  ACTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCC                             >  SRR4302543.4262917/1‑94 (MQ=60)
                                                                   CTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCG                            >  SRR4302543.1289703/1‑94 (MQ=60)
                                                                   CTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCG                            >  SRR4302543.1834701/1‑94 (MQ=60)
                                                                   CTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCG                            <  SRR4302543.7030213/94‑1 (MQ=60)
                                                                   CTCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCCTCATCGCG                            >  SRR4302543.3777091/1‑94 (MQ=60)
                                                                   CGCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCCCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCG                            <  SRR4302543.664228/94‑1 (MQ=60)
                                                                    TCAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGC                           >  SRR4302543.5489571/1‑94 (MQ=60)
                                                                     CAGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCC                          >  SRR4302543.856301/1‑94 (MQ=60)
                                                                      AGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCT                         <  SRR4302543.6415470/94‑1 (MQ=60)
                                                                      AGCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCT                         >  SRR4302543.206134/1‑94 (MQ=60)
                                                                       GCAACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTA                        >  SRR4302543.3917357/1‑94 (MQ=60)
                                                                         AACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACC                      <  SRR4302543.2802440/94‑1 (MQ=60)
                                                                          ACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCG                     >  SRR4302543.1896344/1‑94 (MQ=60)
                                                                          ACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCG                     <  SRR4302543.4415677/94‑1 (MQ=60)
                                                                          ACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCG                     <  SRR4302543.743052/94‑1 (MQ=60)
                                                                          ACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCG                     <  SRR4302543.381165/94‑1 (MQ=60)
                                                                          ACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCG                     <  SRR4302543.3793828/94‑1 (MQ=60)
                                                                          ACAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCG                     <  SRR4302543.3793830/94‑1 (MQ=60)
                                                                           CAATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGC                    >  SRR4302543.2332830/1‑94 (MQ=60)
                                                                            AATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCA                   >  SRR4302543.5913243/1‑94 (MQ=60)
                                                                             ATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCAC                  >  SRR4302543.7002700/1‑94 (MQ=60)
                                                                             ATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCAC                  >  SRR4302543.6700274/1‑94 (MQ=60)
                                                                             ATTTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCAC                  >  SRR4302543.2385559/1‑94 (MQ=60)
                                                                               TTCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTT                <  SRR4302543.945250/94‑1 (MQ=60)
                                                                                TCCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTC               >  SRR4302543.7575900/1‑94 (MQ=60)
                                                                                 CCGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCG              <  SRR4302543.6942087/94‑1 (MQ=60)
                                                                                  CGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGC             >  SRR4302543.650335/1‑94 (MQ=60)
                                                                                  CGGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGC             >  SRR4302543.3521565/1‑94 (MQ=60)
                                                                                   GGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCC            <  SRR4302543.5777822/94‑1 (MQ=60)
                                                                                   GGGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCC            >  SRR4302543.3916617/1‑94 (MQ=60)
                                                                                    GGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCG           <  SRR4302543.1064171/94‑1 (MQ=60)
                                                                                    GGTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCG           >  SRR4302543.7860777/1‑94 (MQ=60)
                                                                                     GTCGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGC          >  SRR4302543.1070567/1‑94 (MQ=60)
                                                                                       CGGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAA        >  SRR4302543.57693/1‑94 (MQ=60)
                                                                                        GGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAG       <  SRR4302543.3565419/94‑1 (MQ=60)
                                                                                        GGTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAG       <  SRR4302543.1124612/94‑1 (MQ=60)
                                                                                         GTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGG      <  SRR4302543.5508212/94‑1 (MQ=60)
                                                                                         GTAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGG      >  SRR4302543.5617028/1‑94 (MQ=60)
                                                                                          TAAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGT     >  SRR4302543.2762905/1‑94 (MQ=60)
                                                                                           AAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGTT    <  SRR4302543.1663995/94‑1 (MQ=60)
                                                                                           AAGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGTT    >  SRR4302543.884833/1‑94 (MQ=60)
                                                                                           AAGCTCGACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGTT    >  SRR4302543.1146486/1‑94 (MQ=60)
                                                                                            AGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGTTG   <  SRR4302543.4921045/94‑1 (MQ=60)
                                                                                            AGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGTTG   >  SRR4302543.7641058/1‑94 (MQ=60)
                                                                                            AGCTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGTTG   <  SRR4302543.6997537/94‑1 (MQ=60)
                                                                                             GCTCTACCTGAGACGCCAGCGCATAATTTGGCTTGAGCAAATCAAACACCGCTAATTCCGTCAGCCCGCTTACCGCACTTCGGCGCAAGGTTGA  <  SRR4302543.3937235/94‑1 (MQ=60)
                                                                                             |                                                                                             
TCTTTGCGGGCTTCACCAGATAACCCCGCACCTCGCCGTGACCATTTGGCGAAGGATACGTGATGTACTCAGCAACAATTTCCGGGTCGGTAAACTCTACCTGAGTCGCCAGCGCATAATTTGGCTTGAGCAAATCAAACAACGCTAATGCCGTCATCCCGCCTACCGCACTTCGCCGCAAGGTTGA  >  NC_000913/3145478‑3145664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑