Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,270,720 |
T→C |
N160S (AAC→AGC) |
yhaF ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,270,720 | 0 | T | C | 100.0%
| 729.1
/ NA
| 228 | N160S (AAC→AGC) | yhaF | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (100/128); total (100/128) |
Only 100 of 231 total aligned reads displayed.
GCATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGTTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATA > NC_000913/3270630‑3270809
|
cATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTAt > 1:3199569/1‑93 (MQ=255)
aTTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATc < 2:2562670/93‑1 (MQ=255)
ttGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCt < 1:2210874/93‑1 (MQ=255)
tGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTa < 1:1740857/93‑1 (MQ=255)
gCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTAc < 2:3030598/93‑1 (MQ=255)
cGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGc < 2:2684496/93‑1 (MQ=255)
agaTGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGccc < 1:2434220/93‑1 (MQ=255)
aTGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCctg > 2:1561321/1‑93 (MQ=255)
gCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCctgctg < 2:3517836/93‑1 (MQ=255)
gCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCctgctg < 1:3053619/93‑1 (MQ=255)
cTAATGCCGCGGCCAGATCGCTGGGTCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGAc < 2:898129/93‑1 (MQ=255)
cTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGAc > 1:2046628/1‑93 (MQ=255)
cTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGAc > 2:174481/1‑93 (MQ=255)
cTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGAc > 2:28629/1‑93 (MQ=255)
cTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGAc > 1:2553033/1‑93 (MQ=255)
tAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACt > 2:2246661/1‑93 (MQ=255)
caaTGCCGCCGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACt < 1:3432530/92‑1 (MQ=255)
cgcgGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTAt > 1:975120/1‑93 (MQ=255)
cgcgGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTAt > 1:3792725/1‑93 (MQ=255)
gcgGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACTCTATCTACCCCCTGCTGACTTTCtttt > 1:3628418/1‑90 (MQ=255)
gcgGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATc < 1:2627384/93‑1 (MQ=255)
gcgGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATc < 2:2276116/93‑1 (MQ=255)
gcgCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCt < 1:3403129/91‑1 (MQ=255)
ggCCAGATGGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTAAGCCCTGCTGACTTTCTATCTg > 2:630000/1‑93 (MQ=255)
gCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTgg > 1:338185/1‑93 (MQ=255)
cAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGAc > 1:663331/1‑93 (MQ=255)
cAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGAc > 2:4190150/1‑93 (MQ=255)
gATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCa > 2:3263357/1‑93 (MQ=255)
gATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCa > 1:392875/1‑93 (MQ=255)
aTCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAg < 1:3089586/93‑1 (MQ=255)
aTCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAg < 1:1699096/93‑1 (MQ=255)
cGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGaa < 1:919107/93‑1 (MQ=255)
tGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAg < 2:2880323/93‑1 (MQ=255)
ggggCCGACGAAGAGGCCGTCTACTCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGt < 2:3192200/93‑1 (MQ=255)
gggCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTg > 2:3545905/1‑93 (MQ=255)
ggCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGa < 2:556318/93‑1 (MQ=255)
ggCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGa < 2:373333/93‑1 (MQ=255)
gCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGAt < 1:3261212/93‑1 (MQ=255)
gCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGAt > 2:2802193/1‑93 (MQ=255)
ccGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATg < 1:1944866/93‑1 (MQ=255)
ccGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATg < 1:604387/93‑1 (MQ=255)
cgacgaAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGt > 2:3237210/1‑93 (MQ=255)
cgacgaAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGt > 1:3166032/1‑93 (MQ=255)
aaGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGCTGTTCTTg < 2:4564211/93‑1 (MQ=255)
aaGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTg > 1:1387900/1‑93 (MQ=255)
aaGATGCCGTCGACGGCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTTCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTg < 2:734070/93‑1 (MQ=255)
gATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGtt < 2:4329083/93‑1 (MQ=255)
gATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGtt < 1:2958905/93‑1 (MQ=255)
aTGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTc < 2:3968787/93‑1 (MQ=255)
tGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCg > 2:3617818/1‑93 (MQ=255)
tGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCg < 2:4030662/93‑1 (MQ=255)
gCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGa > 2:4657563/1‑93 (MQ=255)
gCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGa < 2:200893/93‑1 (MQ=255)
cGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACt < 1:465474/93‑1 (MQ=255)
gTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTg < 2:1270056/93‑1 (MQ=255)
gTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTg > 2:2377707/1‑93 (MQ=255)
cTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAg < 1:32387/93‑1 (MQ=255)
cTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAg < 1:1475802/93‑1 (MQ=255)
tACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGc < 1:1227022/93‑1 (MQ=255)
ccTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGaaa > 2:1354844/1‑93 (MQ=255)
ttCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAaata > 1:2871259/1‑93 (MQ=255)
ttCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAaata > 1:11800/1‑93 (MQ=255)
ttCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAaata > 1:4321830/1‑93 (MQ=255)
tCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAaataa < 2:772441/93‑1 (MQ=255)
cGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAaataat > 2:2496088/1‑93 (MQ=255)
ggTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATc < 2:3340581/93‑1 (MQ=255)
ggTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATc < 2:3801350/93‑1 (MQ=255)
ggTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATc < 1:513516/93‑1 (MQ=255)
gTAGCGGCAATTGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATcc > 2:2973161/1‑93 (MQ=255)
tAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCg < 2:1632787/93‑1 (MQ=255)
aGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGc > 2:1450684/1‑93 (MQ=255)
aGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGc < 2:3834903/93‑1 (MQ=255)
gCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGcc > 1:863783/1‑93 (MQ=255)
cGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCa < 2:3913440/93‑1 (MQ=255)
cGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCa < 2:1940790/93‑1 (MQ=255)
cGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCa < 2:892618/93‑1 (MQ=255)
cGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCa < 2:1033521/93‑1 (MQ=255)
cGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCa < 2:132528/93‑1 (MQ=255)
ggCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCAc > 2:4429273/1‑93 (MQ=255)
cAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACgg < 2:286248/93‑1 (MQ=255)
cAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACgg < 1:4562067/93‑1 (MQ=255)
aaTGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGt > 2:961192/1‑93 (MQ=255)
aaTGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGt > 1:1148534/1‑93 (MQ=255)
aaTGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGt > 1:3020687/1‑93 (MQ=255)
aTGGCATCGACGCTATCTACGCCCTGCTGACTTTCAATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTg > 1:2812007/1‑93 (MQ=255)
tGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGc > 1:1316576/1‑93 (MQ=255)
ggCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGcc > 2:2450896/1‑93 (MQ=255)
cATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCaa > 2:1244963/1‑93 (MQ=255)
aTCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCaaa > 2:3050814/1‑93 (MQ=255)
aTCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCaaa < 2:2231692/93‑1 (MQ=255)
aTCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCaaa < 2:1413018/93‑1 (MQ=255)
aTCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCaaa > 2:1274120/1‑93 (MQ=255)
aTCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCaaa > 1:2096029/1‑93 (MQ=255)
tCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAAc > 1:1055466/1‑93 (MQ=255)
tCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAAc > 2:3536288/1‑93 (MQ=255)
cGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACa > 1:1718314/1‑93 (MQ=255)
cGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACa > 1:4170122/1‑93 (MQ=255)
cGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACa < 1:788821/93‑1 (MQ=255)
cGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACa < 2:1914396/93‑1 (MQ=255)
gACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACat > 1:3312081/1‑93 (MQ=255)
|
GCATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGTTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATA > NC_000913/3270630‑3270809
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGCATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGTTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATATTGG > NC_000913/3270627‑3270813
|
GATGCATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGC > SRR4302535.4343805/1‑94 (MQ=60)
TGCATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTA > SRR4302535.2801791/1‑94 (MQ=60)
GCATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTAT > SRR4302535.3221719/1‑94 (MQ=60)
ATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCT > SRR4302535.1003151/1‑94 (MQ=60)
ATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCT < SRR4302535.47313/94‑1 (MQ=60)
ATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCT > SRR4302535.1207845/1‑94 (MQ=60)
TTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTA < SRR4302535.2226623/94‑1 (MQ=60)
TGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTAC < SRR4302535.1753439/94‑1 (MQ=60)
CGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCC > SRR4302535.2615510/1‑94 (MQ=60)
AGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCT < SRR4302535.2451756/94‑1 (MQ=60)
ATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGC > SRR4302535.3155764/1‑94 (MQ=60)
TGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGACGATGCCGTCTACGCCTTCCGTAGGGGCAATGGCATCGACGCTATCTACGCCCTGGT > SRR4302535.1485467/1‑94 (MQ=60)
GGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTG > SRR4302535.4358073/1‑94 (MQ=60)
GGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTG > SRR4302535.546566/1‑94 (MQ=60)
GCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGA > SRR4302535.3172849/1‑94 (MQ=60)
GCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGA < SRR4302535.3074999/94‑1 (MQ=60)
CCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGAC > SRR4302535.2571414/1‑94 (MQ=60)
CCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGAC > SRR4302535.621724/1‑94 (MQ=60)
CCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGAC > SRR4302535.2061366/1‑94 (MQ=60)
CTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACT > SRR4302535.3083321/1‑94 (MQ=60)
TAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTT > SRR4302535.851991/1‑94 (MQ=60)
TAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTT > SRR4302535.194695/1‑94 (MQ=60)
CAATGCCGCCGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTT < SRR4302535.3456383/94‑1 (MQ=60)
AATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTT > SRR4302535.900181/1‑94 (MQ=60)
TGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCT > SRR4302535.221058/1‑94 (MQ=60)
TGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCT > SRR4302535.1067606/1‑94 (MQ=60)
GCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTA < SRR4302535.3544653/94‑1 (MQ=60)
CCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTAT > SRR4302535.982043/1‑94 (MQ=60)
CCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTAT > SRR4302535.3818874/1‑94 (MQ=60)
CCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTAT < SRR4302535.69561/94‑1 (MQ=60)
CGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACTCTATCTACCCCCTGCTGACTTTCTttt > SRR4302535.3653565/1‑91 (MQ=60)
CGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATC < SRR4302535.1170433/94‑1 (MQ=60)
GCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCT < SRR4302535.2646214/94‑1 (MQ=60)
gcGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTG < SRR4302535.3426812/92‑1 (MQ=60)
GGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGG > SRR4302535.376357/1‑94 (MQ=60)
GGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGG > SRR4302535.340525/1‑94 (MQ=60)
CCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGAC > SRR4302535.667966/1‑94 (MQ=60)
CAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACC < SRR4302535.1745553/94‑1 (MQ=60)
AGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCA > SRR4302535.395613/1‑94 (MQ=60)
GATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAG < SRR4302535.3019724/94‑1 (MQ=60)
ATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGA < SRR4302535.1711376/94‑1 (MQ=60)
ATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGA < SRR4302535.3111104/94‑1 (MQ=60)
ATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATATGGACCAGA < SRR4302535.4272259/94‑1 (MQ=60)
CGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAAT < SRR4302535.925625/94‑1 (MQ=60)
GCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATG < SRR4302535.3283871/94‑1 (MQ=60)
CCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGT > SRR4302535.3187975/1‑94 (MQ=60)
CCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGT < SRR4302535.2850450/94‑1 (MQ=60)
CCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGT < SRR4302535.1958868/94‑1 (MQ=60)
CCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGT < SRR4302535.601638/94‑1 (MQ=60)
CCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGT < SRR4302535.608616/94‑1 (MQ=60)
CGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTT < SRR4302535.2183135/94‑1 (MQ=60)
CGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTT > SRR4302535.2961927/1‑94 (MQ=60)
CGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTT < SRR4302535.1945768/94‑1 (MQ=60)
GAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTG > SRR4302535.1397804/1‑94 (MQ=60)
AAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGT > SRR4302535.3432619/1‑94 (MQ=60)
AGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTTGACCAGAATAGTGATGTTCTTGTT > SRR4302535.1444665/1‑94 (MQ=60)
AGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTT < SRR4302535.3835679/94‑1 (MQ=60)
GATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTC < SRR4302535.3426078/94‑1 (MQ=60)
GATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTC < SRR4302535.2979685/94‑1 (MQ=60)
ATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCG > SRR4302535.3317063/1‑94 (MQ=60)
ATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCG < SRR4302535.133680/94‑1 (MQ=60)
CGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTG > SRR4302535.32657/1‑94 (MQ=60)
CGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTG < SRR4302535.468729/94‑1 (MQ=60)
CTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCTACTGAGC < SRR4302535.3036367/94‑1 (MQ=60)
CTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGC < SRR4302535.1486368/94‑1 (MQ=60)
CTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGC > SRR4302535.1595836/1‑94 (MQ=60)
CTACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGC < SRR4302535.32636/94‑1 (MQ=60)
TACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCG > SRR4302535.3273716/1‑94 (MQ=60)
TACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCG > SRR4302535.3447500/1‑94 (MQ=60)
TACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCG < SRR4302535.1235796/94‑1 (MQ=60)
TACGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCG < SRR4302535.2312059/94‑1 (MQ=60)
ACGCCTTCGGTAGCGGCAATGGCATCGGCGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGA < SRR4302535.2569558/94‑1 (MQ=60)
CGCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAA > SRR4302535.3402306/1‑94 (MQ=60)
GCCTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAA > SRR4302535.2052060/1‑94 (MQ=60)
CTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATA > SRR4302535.2891604/1‑94 (MQ=60)
CTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATA > SRR4302535.4351397/1‑94 (MQ=60)
CTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATA < SRR4302535.4186615/94‑1 (MQ=60)
CTTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATA > SRR4302535.11891/1‑94 (MQ=60)
TTCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAA > SRR4302535.1619002/1‑94 (MQ=60)
TCGGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAAT < SRR4302535.812811/94‑1 (MQ=60)
GGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCC < SRR4302535.3073754/94‑1 (MQ=60)
GGTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCC < SRR4302535.517104/94‑1 (MQ=60)
GGTAGCGACACTGTCATCGCCGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCC < SRR4302535.2658703/94‑1 (MQ=60)
GTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCG < SRR4302535.1726002/94‑1 (MQ=60)
GTAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCG < SRR4302535.1319152/94‑1 (MQ=60)
TAGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGC > SRR4302535.3190396/1‑94 (MQ=60)
AGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCC < SRR4302535.2075480/94‑1 (MQ=60)
AGCGGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCC > SRR4302535.869887/1‑94 (MQ=60)
GGCAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACG < SRR4302535.1238527/94‑1 (MQ=60)
CAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGT > SRR4302535.3041841/1‑94 (MQ=60)
CAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGT > SRR4302535.1156715/1‑94 (MQ=60)
CAATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGT < SRR4302535.4593200/94‑1 (MQ=60)
AATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTG > SRR4302535.976716/1‑94 (MQ=60)
AATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTG < SRR4302535.3228923/94‑1 (MQ=60)
AATGGCATCGACGCTATCTACGCCCTGCTGACTTTCAATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTG > SRR4302535.2831992/1‑94 (MQ=60)
ATGGCATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGC > SRR4302535.1325982/1‑94 (MQ=60)
CATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAA > SRR4302535.2111145/1‑94 (MQ=60)
ATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAAC > SRR4302535.4684105/1‑94 (MQ=60)
ATCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAAC > SRR4302535.1062970/1‑94 (MQ=60)
TCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACA > SRR4302535.4198675/1‑94 (MQ=60)
TCGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACA > SRR4302535.1730744/1‑94 (MQ=60)
CGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACAT > SRR4302535.3335127/1‑94 (MQ=60)
CGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACAT < SRR4302535.4426411/94‑1 (MQ=60)
CGACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACAT < SRR4302535.794360/94‑1 (MQ=60)
GACGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATA < SRR4302535.3924284/94‑1 (MQ=60)
CGCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATATT < SRR4302535.3548940/94‑1 (MQ=60)
CGCTATCTACGCCCTGCTGACTTCCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATATT < SRR4302535.1132680/94‑1 (MQ=60)
GCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATATTG < SRR4302535.1970645/94‑1 (MQ=60)
GCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATATTG < SRR4302535.2249959/94‑1 (MQ=60)
GCTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATACGCCACTGCGGCAAACATATTG > SRR4302535.3818075/1‑94 (MQ=60)
CTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATATTGG > SRR4302535.1001691/1‑94 (MQ=60)
CTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGAGCCAAACATATTGG > SRR4302535.1367431/1‑94 (MQ=60)
|
GATGCATTGCCGAGATGGCCTAATGCCGCGGCCAGATCGCTGGGGCCGACGAAGATGCCGTCTACGCCTTCGGTAGCGGCAATGGCATCGACGTTATCTACGCCCTGCTGACTTTCTATCTGGACCAGAATAGTGATGTTCTTGTTCGACTGAGCGAAATAATCCGCCACGGTGCCAAACATATTGG > NC_000913/3270627‑3270813
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
