Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,300,625 |
G→A |
V172I (GTC→ATC) |
yhbV → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,300,625 | 0 | G | A | 100.0%
| 637.4
/ NA
| 179 | V172I (GTC→ATC) | yhbV | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (82/97); total (82/97) |
Only 100 of 191 total aligned reads displayed.
TGTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAGTCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACC > NC_000913/3300535‑3300714
|
tgtATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATc > 2:3931736/1‑93 (MQ=255)
gtATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATcc < 1:4204014/93‑1 (MQ=255)
gtATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATcc > 2:2568394/1‑93 (MQ=255)
tATGCGAGTGGAGCTTTCCCGCGACTGGCTGGTTAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCt < 1:1082337/93‑1 (MQ=255)
tATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCt < 1:2525781/93‑1 (MQ=255)
tATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCt < 1:3397844/93‑1 (MQ=255)
tATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCt < 2:1289653/93‑1 (MQ=255)
tATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATACGTAACCAGTTTGAAGTGGAAATCCt > 2:3796245/1‑93 (MQ=255)
tGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGa > 2:4344399/1‑93 (MQ=255)
tGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGa < 1:3606420/93‑1 (MQ=255)
ccAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGc < 2:3447500/93‑1 (MQ=255)
ccAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGc < 1:2563159/93‑1 (MQ=255)
aGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTa < 2:2710022/93‑1 (MQ=255)
ggAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACgg < 1:263581/93‑1 (MQ=255)
gCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCa > 1:4590213/1‑93 (MQ=255)
gCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCa > 1:1981908/1‑93 (MQ=255)
gCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCa > 2:1872204/1‑93 (MQ=255)
cTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCAt > 2:2198171/1‑93 (MQ=255)
cTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCAt > 1:251039/1‑93 (MQ=255)
tttCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATc < 2:701354/93‑1 (MQ=255)
tttCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATc < 1:4202566/93‑1 (MQ=255)
tttCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATc < 2:3024564/93‑1 (MQ=255)
ttCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCt < 1:76945/93‑1 (MQ=255)
tCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTg < 2:2262574/93‑1 (MQ=255)
cccGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGc < 1:1048218/93‑1 (MQ=255)
ccGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGcc < 1:1746110/93‑1 (MQ=255)
cgcgACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCg > 1:2330353/1‑93 (MQ=255)
gcgACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGc < 1:3707360/93‑1 (MQ=255)
gcgACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGGGGAAATCCTGAGCTACGGTCATCTGCCGc > 1:306837/1‑93 (MQ=255)
gACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTg < 2:1555975/93‑1 (MQ=255)
aCTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTgg > 1:1280667/1‑93 (MQ=255)
aCTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTgg > 2:3577670/1‑93 (MQ=255)
tggctggTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGcc < 1:1220876/93‑1 (MQ=255)
ctggTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTAc > 1:2405958/1‑93 (MQ=255)
tggTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACt > 1:4314239/1‑93 (MQ=255)
tgTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTc < 1:1908561/92‑1 (MQ=255)
ggTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTc > 1:2845806/1‑93 (MQ=255)
gTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTcc < 2:1010987/93‑1 (MQ=255)
tCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTccgcccg > 2:3434804/1‑93 (MQ=255)
cgtGCTTAATCAGTGCGATGAGCTGGGCATGCGTAACGAGTTTGAAGTGGAAACCCTGAGCTACGGTCACCTGCCGCTGCCCTACTccgcccg < 2:531212/91‑1 (MQ=255)
tGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCgct < 1:4100191/93‑1 (MQ=255)
tGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCgct > 2:2559264/1‑93 (MQ=255)
tGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCgct > 2:382366/1‑93 (MQ=255)
gCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGTCTACTCCGCCCgctg > 2:4407724/1‑93 (MQ=255)
tAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCtt < 2:1295957/93‑1 (MQ=255)
aTCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTa > 2:2246499/1‑93 (MQ=255)
cAGTGTGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTAcc < 1:959138/93‑1 (MQ=255)
cAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTAcc < 2:3689534/93‑1 (MQ=255)
cGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACcgcgcg < 1:1854008/93‑1 (MQ=255)
gATGAGCTGGGCATTCGTACCCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGt < 2:4095109/93‑1 (MQ=255)
gATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGt > 1:1710696/1‑93 (MQ=255)
gATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGt > 1:3148788/1‑93 (MQ=255)
aTGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGtt < 2:1244365/93‑1 (MQ=255)
tGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTGCCGCGCGTTc > 2:7859/1‑93 (MQ=255)
aGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCgg > 1:1047664/1‑93 (MQ=255)
gCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGa < 1:3772583/93‑1 (MQ=255)
gCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGa < 1:2625887/93‑1 (MQ=255)
gCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGa < 1:2214757/93‑1 (MQ=255)
cTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGaa < 1:842926/93‑1 (MQ=255)
tGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAg > 1:4163533/1‑93 (MQ=255)
tGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAg > 2:1962197/1‑93 (MQ=255)
gggCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGa > 1:1251758/1‑93 (MQ=255)
ggaaTTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCTCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGAc < 2:2822662/90‑1 (MQ=255)
gCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGAcc < 1:1818338/93‑1 (MQ=255)
cATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCg > 2:1508168/1‑93 (MQ=255)
cATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCg > 2:2767214/1‑93 (MQ=255)
cATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCg > 1:3382854/1‑93 (MQ=255)
cATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCg < 1:1684206/93‑1 (MQ=255)
aTTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGc > 2:2274393/1‑93 (MQ=255)
aTTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGc > 1:1739250/1‑93 (MQ=255)
ttCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGcc > 2:3384177/1‑93 (MQ=255)
ttCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGcc < 1:3333325/93‑1 (MQ=255)
tCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGccc > 2:1125220/1‑93 (MQ=255)
tCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCACGCGTTCCGAAGACCGccc > 2:1153995/1‑93 (MQ=255)
gTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGa > 2:290476/1‑93 (MQ=255)
acgaGTTGGAAGTGGAAATCCTGAGCGACGGTCAGCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAg < 1:1601826/90‑1 (MQ=255)
aCCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAg > 2:3841580/1‑93 (MQ=255)
ccAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTCCTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGa < 2:3846189/93‑1 (MQ=255)
ccAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGa < 2:893151/93‑1 (MQ=255)
ccAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGa < 2:963130/93‑1 (MQ=255)
cAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGAt > 1:3518915/1‑93 (MQ=255)
cAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGAt > 1:4389399/1‑93 (MQ=255)
aGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATg > 2:1621302/1‑93 (MQ=255)
gTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGa < 1:2909346/93‑1 (MQ=255)
tttGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAg < 2:3442389/93‑1 (MQ=255)
tttGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAg < 1:317591/93‑1 (MQ=255)
gttGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAg < 2:2978342/92‑1 (MQ=255)
tGAAGTGGAATTCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAgtg < 2:2877222/93‑1 (MQ=255)
tGAAGTGGAAATCCTGAGCTACGGTCGTCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAgtg > 1:2269156/1‑93 (MQ=255)
tGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAgtg < 2:3177495/93‑1 (MQ=255)
tGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAgtg > 2:4452579/1‑93 (MQ=255)
tGAAGTGGAAATCCTGACCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAgtg < 1:2719570/93‑1 (MQ=255)
tGAAGCGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAgtg > 1:3613166/1‑93 (MQ=255)
gAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAgtgt < 1:547223/93‑1 (MQ=255)
aGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGa > 1:3418180/1‑93 (MQ=255)
aGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGa < 1:1047603/93‑1 (MQ=255)
gTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGaa > 1:4524189/1‑93 (MQ=255)
gTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGaa < 1:161660/93‑1 (MQ=255)
tGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGaaa < 1:2254663/93‑1 (MQ=255)
gAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAAcc > 2:176777/1‑93 (MQ=255)
|
TGTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAGTCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACC > NC_000913/3300535‑3300714
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTGTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAGTCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGCT > NC_000913/3300533‑3300718
|
GGTGTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTTGGCATTCGTAACCAGTTTGAAGTGGAAAT > SRR4302535.1845314/1‑94 (MQ=60)
GTGTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATC < SRR4302535.2644845/94‑1 (MQ=60)
GTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCT > SRR4302535.440219/1‑94 (MQ=60)
GTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCT < SRR4302535.4232788/94‑1 (MQ=60)
TATGCGAGTGGAGCTTTCCCGCGACTGGCTGGTTAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTG < SRR4302535.1090034/94‑1 (MQ=60)
TATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTG < SRR4302535.2543980/94‑1 (MQ=60)
TATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTG < SRR4302535.3421487/94‑1 (MQ=60)
ATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCTGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGA > SRR4302535.1192897/1‑94 (MQ=60)
TGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAG < SRR4302535.3631440/94‑1 (MQ=60)
CCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCT > SRR4302535.3615293/1‑94 (MQ=60)
CCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCT < SRR4302535.2581606/94‑1 (MQ=60)
CCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCT > SRR4302535.3139019/1‑94 (MQ=60)
TGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGG < SRR4302535.3855028/94‑1 (MQ=60)
GGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGT < SRR4302535.265411/94‑1 (MQ=60)
AGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCA > SRR4302535.1996177/1‑94 (MQ=60)
AGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCA > SRR4302535.4621458/1‑94 (MQ=60)
GCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCAT > SRR4302535.2232299/1‑94 (MQ=60)
GCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCAT > SRR4302535.252767/1‑94 (MQ=60)
CTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATC > SRR4302535.1710448/1‑94 (MQ=60)
TTTCCCGCGACTGGCTGGTGAATTTGCTTAATCAGTGCGATGAGCTGGGGATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCT > SRR4302535.1279161/1‑94 (MQ=60)
TTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCT < SRR4302535.3088442/94‑1 (MQ=60)
TTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCT < SRR4302535.2709771/94‑1 (MQ=60)
TTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCT < SRR4302535.4231321/94‑1 (MQ=60)
TTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTG < SRR4302535.77499/94‑1 (MQ=60)
TCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGC < SRR4302535.161606/94‑1 (MQ=60)
CCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCC < SRR4302535.1055652/94‑1 (MQ=60)
CCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCG < SRR4302535.1758743/94‑1 (MQ=60)
CCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCG > SRR4302535.1672492/1‑94 (MQ=60)
CCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCG > SRR4302535.2347020/1‑94 (MQ=60)
CCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCG < SRR4302535.3183420/94‑1 (MQ=60)
CGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGGGGAAATCCTGAGCTACGGTCATCTGCCGC > SRR4302535.308958/1‑94 (MQ=60)
GCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCT < SRR4302535.3733028/94‑1 (MQ=60)
CGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTG > SRR4302535.882933/1‑94 (MQ=60)
GACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGG > SRR4302535.1289808/1‑94 (MQ=60)
GACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGG < SRR4302535.250012/94‑1 (MQ=60)
ACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGC < SRR4302535.3310853/94‑1 (MQ=60)
TGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCT < SRR4302535.1935567/94‑1 (MQ=60)
TGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCT < SRR4302535.1229626/94‑1 (MQ=60)
GCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTAC > SRR4302535.2423274/1‑94 (MQ=60)
CTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACT > SRR4302535.4343749/1‑94 (MQ=60)
TGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTC > SRR4302535.2865982/1‑94 (MQ=60)
TGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCC < SRR4302535.1922320/94‑1 (MQ=60)
GTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCG < SRR4302535.809175/94‑1 (MQ=60)
CTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCT > SRR4302535.3633808/1‑94 (MQ=60)
CTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCT > SRR4302535.1231540/1‑94 (MQ=60)
CTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCT < SRR4302535.2614111/94‑1 (MQ=60)
TGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTG < SRR4302535.4128264/94‑1 (MQ=60)
CTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCT < SRR4302535.2566386/94‑1 (MQ=60)
CTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTAAAATGGAAAACCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCT < SRR4302535.4710313/94‑1 (MQ=60)
TTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTT > SRR4302535.3417343/1‑94 (MQ=60)
CAGTGTGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCG < SRR4302535.965950/94‑1 (MQ=60)
GTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCG < SRR4302535.2282333/94‑1 (MQ=60)
GCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCG > SRR4302535.3422241/1‑94 (MQ=60)
GCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCG < SRR4302535.4456224/94‑1 (MQ=60)
CGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGTAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGT < SRR4302535.1303300/94‑1 (MQ=60)
CGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGT < SRR4302535.1867363/94‑1 (MQ=60)
CGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGT > SRR4302535.1723061/1‑94 (MQ=60)
CGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGT > SRR4302535.1811574/1‑94 (MQ=60)
CGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGT > SRR4302535.3170679/1‑94 (MQ=60)
GAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGG > SRR4302535.1055093/1‑94 (MQ=60)
GCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAA < SRR4302535.3798604/94‑1 (MQ=60)
GCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAA < SRR4302535.2230528/94‑1 (MQ=60)
GCTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAA < SRR4302535.2644705/94‑1 (MQ=60)
CTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAG < SRR4302535.716269/94‑1 (MQ=60)
CTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAG < SRR4302535.848848/94‑1 (MQ=60)
CTGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAG > SRR4302535.4192037/1‑94 (MQ=60)
TGGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGA > SRR4302535.1260696/1‑94 (MQ=60)
GGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGAC < SRR4302535.1055499/94‑1 (MQ=60)
GGGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGAC > SRR4302535.3470644/1‑94 (MQ=60)
GGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACC < SRR4302535.4582208/94‑1 (MQ=60)
GGCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACC < SRR4302535.3765087/94‑1 (MQ=60)
GCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCG > SRR4302535.3406371/1‑94 (MQ=60)
GCATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCG < SRR4302535.1831479/94‑1 (MQ=60)
GATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGC < SRR4302535.3640371/94‑1 (MQ=60)
CATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGC < SRR4302535.1696404/94‑1 (MQ=60)
CATTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGC > SRR4302535.1751819/1‑94 (MQ=60)
TTCGTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCC < SRR4302535.3356525/94‑1 (MQ=60)
GTAACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAA > SRR4302535.2652978/1‑94 (MQ=60)
AACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAG < SRR4302535.1743045/94‑1 (MQ=60)
ACGAGTTGGAAGTGGAAATCCTGAGCGACGGTCAGCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGA < SRR4302535.1613385/94‑1 (MQ=60)
ACCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGA > SRR4302535.4271113/1‑94 (MQ=60)
CCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGAT > SRR4302535.4419432/1‑94 (MQ=60)
CCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGAT < SRR4302535.1000122/94‑1 (MQ=60)
CCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGAT > SRR4302535.3543360/1‑94 (MQ=60)
CCAGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGAT < SRR4302535.4181501/94‑1 (MQ=60)
AGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGA > SRR4302535.1871073/1‑94 (MQ=60)
AGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGA < SRR4302535.2320220/94‑1 (MQ=60)
AGTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGA > SRR4302535.2405894/1‑94 (MQ=60)
GTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAG < SRR4302535.2860053/94‑1 (MQ=60)
GTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAG > SRR4302535.4215429/1‑94 (MQ=60)
GTTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAG < SRR4302535.2929904/94‑1 (MQ=60)
TTTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGT < SRR4302535.319795/94‑1 (MQ=60)
TTGAAGTGGAAATCCTGAGCTACGGTCGTCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTG > SRR4302535.2285335/1‑94 (MQ=60)
TTGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTG < SRR4302535.2058501/94‑1 (MQ=60)
TTGAAGCGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTG > SRR4302535.3638219/1‑94 (MQ=60)
TGAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGT > SRR4302535.183109/1‑94 (MQ=60)
TGAAGTGGAAATCCTGACCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGT < SRR4302535.2738999/94‑1 (MQ=60)
GAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTG < SRR4302535.551045/94‑1 (MQ=60)
GAAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTG < SRR4302535.2896070/94‑1 (MQ=60)
AAGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGA > SRR4302535.3441958/1‑94 (MQ=60)
AGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAA > SRR4302535.4555184/1‑94 (MQ=60)
AGTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAA < SRR4302535.1055031/94‑1 (MQ=60)
GTGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAA < SRR4302535.162792/94‑1 (MQ=60)
TGGAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAAC < SRR4302535.2270716/94‑1 (MQ=60)
GAAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCT > SRR4302535.1585749/1‑94 (MQ=60)
AAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTG > SRR4302535.4560928/1‑94 (MQ=60)
AAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTG < SRR4302535.4701605/94‑1 (MQ=60)
AAATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTG > SRR4302535.3115113/1‑94 (MQ=60)
AATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCGCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGC > SRR4302535.444365/1‑94 (MQ=60)
AATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGGAGACCGCCCGAAAGATGAGTGTGAAACCTGC > SRR4302535.3135480/1‑94 (MQ=60)
AATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGC > SRR4302535.4341438/1‑94 (MQ=60)
AATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGC > SRR4302535.3231420/1‑94 (MQ=60)
ATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGCT < SRR4302535.4422507/94‑1 (MQ=60)
ATCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGCT > SRR4302535.897067/1‑94 (MQ=60)
|
GGTGTATGCCAGTGGAGCTTTCCCGCGACTGGCTGGTGAATCTGCTTAATCAGTGCGATGAGCTGGGCATTCGTAACCAGTTTGAAGTGGAAGTCCTGAGCTACGGTCATCTGCCGCTGGCCTACTCCGCCCGCTGCTTTACCGCGCGTTCGGAAGACCGCCCGAAAGATGAGTGTGAAACCTGCT > NC_000913/3300533‑3300718
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
