Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1873 |
183.1 |
9376148 |
98.2% |
9207377 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,304,194 |
A→G |
R453R (CGT→CGC) |
deaD ← |
inducible ATP‑independent RNA helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,304,194 | 0 | A | G | 100.0%
| 511.1
/ NA
| 161 | R453R (CGT→CGC) | deaD | inducible ATP‑independent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (70/91); total (70/91) |
Only 100 of 165 total aligned reads displayed.
CGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAG > NC_000913/3304105‑3304283
|
cGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGt < 1:2590676/93‑1 (MQ=255)
ggTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGtt > 1:135900/1‑93 (MQ=255)
gTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTc > 1:4650182/1‑93 (MQ=255)
tCGTTACGATCGCGCGGTCCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCa < 2:3305299/93‑1 (MQ=255)
gTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCAcc < 1:2475573/93‑1 (MQ=255)
gTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCAcc > 1:605944/1‑93 (MQ=255)
gTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCAcc < 2:3162254/93‑1 (MQ=255)
ttACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCAccc < 2:4256168/93‑1 (MQ=255)
ttACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCAccc > 2:1591203/1‑93 (MQ=255)
aCGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCtg < 1:2408989/93‑1 (MQ=255)
cGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCtgt < 1:1373545/93‑1 (MQ=255)
aTCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGc > 1:3997830/1‑93 (MQ=255)
aTCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGc < 1:4128619/93‑1 (MQ=255)
tCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGcc < 1:2690632/93‑1 (MQ=255)
tCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGcc > 2:871497/1‑93 (MQ=255)
gcgcgGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCAt < 2:4543279/93‑1 (MQ=255)
cgcgGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCAtt > 2:2744604/1‑93 (MQ=255)
gcgGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCAttt < 1:3880650/93‑1 (MQ=255)
cgGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCAtttt < 2:3647997/93‑1 (MQ=255)
cgGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCAtttt < 1:2971562/93‑1 (MQ=255)
cgGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCAtttt > 2:531518/1‑93 (MQ=255)
gACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTca < 1:3155056/93‑1 (MQ=255)
aCCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTcag < 2:3771995/93‑1 (MQ=255)
aCGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTcagcag < 1:1168181/93‑1 (MQ=255)
aCGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTcagcag < 2:2047056/93‑1 (MQ=255)
aCGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTcagcag < 2:2464489/93‑1 (MQ=255)
aCGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTcagcag < 2:3953452/93‑1 (MQ=255)
aCGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTcagcag > 2:1938215/1‑93 (MQ=255)
aCGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTcagcag < 2:2955314/93‑1 (MQ=255)
aCGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTcagcag < 1:2309929/93‑1 (MQ=255)
cGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGt < 2:4509633/93‑1 (MQ=255)
ggTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGTCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTg < 1:1827392/93‑1 (MQ=255)
ggTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTg > 2:3445349/1‑93 (MQ=255)
gTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGc < 1:3642001/93‑1 (MQ=255)
gTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGc > 2:786128/1‑93 (MQ=255)
tcatcaCGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGcc < 2:4143239/93‑1 (MQ=255)
tcatcaCGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGcc < 1:3949887/93‑1 (MQ=255)
atcaCGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGc < 1:1022068/93‑1 (MQ=255)
cacggtcacggAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAg > 1:1454694/1‑93 (MQ=255)
acggtcacggAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGc > 2:2320039/1‑93 (MQ=255)
ggtcacggAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCa < 1:1908371/93‑1 (MQ=255)
ggtcacggAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCa > 2:1534466/1‑93 (MQ=255)
gtcacggAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCag > 2:430114/1‑93 (MQ=255)
acggAATTCACGTTTCGTACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGt > 2:740198/1‑93 (MQ=255)
cggAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGtt < 1:2953779/93‑1 (MQ=255)
gAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTc > 2:163051/1‑93 (MQ=255)
gAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTc > 2:311153/1‑93 (MQ=255)
aaTTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCg < 2:636688/93‑1 (MQ=255)
aTTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCga < 1:2445209/93‑1 (MQ=255)
aTTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCga > 2:3080921/1‑93 (MQ=255)
ttCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCgag < 1:107985/93‑1 (MQ=255)
cACGTTTCGGAGGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGAt < 1:1210461/93‑1 (MQ=255)
aCGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATc < 2:1475445/93‑1 (MQ=255)
aCGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATc > 1:4272025/1‑93 (MQ=255)
gTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCa < 1:4400670/93‑1 (MQ=255)
ttCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGc > 1:3198841/1‑93 (MQ=255)
gaaCGCATCGGCGCATCTGGCGGGACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGACGCAGCCAGAGATTAGAGATCCAGctct > 2:1139813/3‑93 (MQ=255)
gcGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTc < 1:174876/92‑1 (MQ=255)
cGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCa > 1:951057/1‑93 (MQ=255)
cGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCa < 1:4021538/93‑1 (MQ=255)
gCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCATCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCAc > 2:1806359/1‑93 (MQ=255)
gCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCAc > 2:1400586/1‑93 (MQ=255)
cATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCAcc > 2:3535963/1‑93 (MQ=255)
aTCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCt < 2:3884681/93‑1 (MQ=255)
tCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCtt > 1:4492718/1‑93 (MQ=255)
tCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCtt > 1:826061/1‑93 (MQ=255)
ggCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTca > 1:4633466/1‑93 (MQ=255)
ggCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTca < 1:3081340/93‑1 (MQ=255)
gcgcATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTcag > 2:2124299/1‑93 (MQ=255)
cgcATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTcagc < 2:1434633/93‑1 (MQ=255)
gcATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTcagca > 1:1758556/1‑93 (MQ=255)
gcATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTcagca > 2:2366872/1‑93 (MQ=255)
cATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTcagcag > 1:1915384/1‑93 (MQ=255)
cATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTcagcag < 2:2409364/93‑1 (MQ=255)
cATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTcagcag > 2:1650933/1‑93 (MQ=255)
tCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTc > 1:1768522/1‑93 (MQ=255)
tCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTc < 1:1549278/93‑1 (MQ=255)
tCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTc > 2:814174/1‑93 (MQ=255)
tCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTc < 1:3803240/93‑1 (MQ=255)
cTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCg > 1:2799668/1‑93 (MQ=255)
tGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCgg > 1:3434473/1‑93 (MQ=255)
tGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCgg < 2:3637109/93‑1 (MQ=255)
ggTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGa < 2:3512258/93‑1 (MQ=255)
gTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGaa < 2:1236074/93‑1 (MQ=255)
gTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGaa > 1:1499804/1‑93 (MQ=255)
gTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTAGGCTGaa < 1:1894301/93‑1 (MQ=255)
tACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAAt > 2:2222139/1‑93 (MQ=255)
tACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAAt < 1:1124325/93‑1 (MQ=255)
tACGATCAGAGTGCGTTCACCCGGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAAt < 2:904855/93‑1 (MQ=255)
aCGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAAtt < 2:1084406/93‑1 (MQ=255)
cGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAAttt < 2:1985576/93‑1 (MQ=255)
gATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAAtttt > 2:3079746/1‑93 (MQ=255)
tCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGc > 1:815838/1‑93 (MQ=255)
cAGAGTTCGTGCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCt < 2:1507440/93‑1 (MQ=255)
agagTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTc < 2:2821801/93‑1 (MQ=255)
agagTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTc > 2:232736/1‑93 (MQ=255)
gagTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTca > 2:2571623/1‑93 (MQ=255)
gagTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTca < 1:3953451/93‑1 (MQ=255)
gagTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTca > 1:2184998/1‑93 (MQ=255)
agTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTcag < 2:4349353/93‑1 (MQ=255)
|
CGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAG > NC_000913/3304105‑3304283
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCACGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAGCAGT > NC_000913/3304101‑3304287
|
GCCACGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTG < SRR4302535.197655/94‑1 (MQ=60)
GCCACGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTG < SRR4302535.1626113/94‑1 (MQ=60)
CGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTT < SRR4302535.2609277/94‑1 (MQ=60)
CGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTT < SRR4302535.2813852/94‑1 (MQ=60)
CGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTT > SRR4302535.136848/1‑94 (MQ=60)
GGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTC > SRR4302535.4681674/1‑94 (MQ=60)
CGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACC > SRR4302535.610179/1‑94 (MQ=60)
GTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCC < SRR4302535.2493428/94‑1 (MQ=60)
TTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCT < SRR4302535.895474/94‑1 (MQ=60)
ACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGT < SRR4302535.2426332/94‑1 (MQ=60)
CGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTG < SRR4302535.1383361/94‑1 (MQ=60)
GATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGC > SRR4302535.4025183/1‑94 (MQ=60)
GATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGC > SRR4302535.1458755/1‑94 (MQ=60)
ATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCC < SRR4302535.4156872/94‑1 (MQ=60)
TCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCA < SRR4302535.2709863/94‑1 (MQ=60)
CGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTT > SRR4302535.1479882/1‑94 (MQ=60)
GCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTT < SRR4302535.3907285/94‑1 (MQ=60)
CGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTC > SRR4302535.567026/1‑94 (MQ=60)
CGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTC < SRR4302535.2992421/94‑1 (MQ=60)
GACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAG < SRR4302535.3176971/94‑1 (MQ=60)
ACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGT < SRR4302535.2326463/94‑1 (MQ=60)
ACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGT < SRR4302535.1176520/94‑1 (MQ=60)
GGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGTCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGC < SRR4302535.1840587/94‑1 (MQ=60)
GTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCC < SRR4302535.3667225/94‑1 (MQ=60)
GTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCC < SRR4302535.1945249/94‑1 (MQ=60)
GTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCC > SRR4302535.1769495/1‑94 (MQ=60)
GTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCC < SRR4302535.3433761/94‑1 (MQ=60)
TCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCG < SRR4302535.3976854/94‑1 (MQ=60)
ATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCA < SRR4302535.1029329/94‑1 (MQ=60)
TCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAG > SRR4302535.1465104/1‑94 (MQ=60)
GGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAG < SRR4302535.1922129/94‑1 (MQ=60)
GGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAG > SRR4302535.3905859/1‑94 (MQ=60)
CACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGT > SRR4302535.4033682/1‑94 (MQ=60)
CGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTT < SRR4302535.2974528/94‑1 (MQ=60)
CGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTT < SRR4302535.2433488/94‑1 (MQ=60)
ATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAG < SRR4302535.2462824/94‑1 (MQ=60)
TTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGA < SRR4302535.108748/94‑1 (MQ=60)
TCACGTTTCGGACGGATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTGCAGCAGTGCCGCAGCCAGAGTTTCGAGAT < SRR4302535.772680/94‑1 (MQ=60)
CACGTTTCGGAGGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATC < SRR4302535.1219156/94‑1 (MQ=60)
CACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATC > SRR4302535.4301271/1‑94 (MQ=60)
GTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAG < SRR4302535.4430785/94‑1 (MQ=60)
TTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGC > SRR4302535.3220979/1‑94 (MQ=60)
CGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCT > SRR4302535.1619207/1‑94 (MQ=60)
CGGACGCATCGGCGCATCTGGCGATACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCT < SRR4302535.3146706/94‑1 (MQ=60)
GACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTC > SRR4302535.2874019/1‑94 (MQ=60)
GACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTC > SRR4302535.1117516/1‑94 (MQ=60)
GCGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCA < SRR4302535.176086/94‑1 (MQ=60)
ACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCA < SRR4302535.4275726/94‑1 (MQ=60)
ACGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCA > SRR4302535.957788/1‑94 (MQ=60)
CGCATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCAC < SRR4302535.4049055/94‑1 (MQ=60)
CATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCT > SRR4302535.1887691/1‑94 (MQ=60)
ATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTT > SRR4302535.4523555/1‑94 (MQ=60)
ATCGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTT > SRR4302535.831845/1‑94 (MQ=60)
CGGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCA > SRR4302535.4664899/1‑94 (MQ=60)
GGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAG < SRR4302535.3102819/94‑1 (MQ=60)
GGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAG < SRR4302535.2404120/94‑1 (MQ=60)
GGCGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAG < SRR4302535.1282748/94‑1 (MQ=60)
CGCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCA > SRR4302535.1771267/1‑94 (MQ=60)
GCATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAG > SRR4302535.1929187/1‑94 (MQ=60)
CATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGT > SRR4302535.2558380/1‑94 (MQ=60)
CATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGT > SRR4302535.4012282/1‑94 (MQ=60)
ATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCCCCTTCAGCAGTC < SRR4302535.4387236/94‑1 (MQ=60)
ATCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTC > SRR4302535.1781344/1‑94 (MQ=60)
TCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCG < SRR4302535.1560439/94‑1 (MQ=60)
TCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCG > SRR4302535.2819586/1‑94 (MQ=60)
TCTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCG < SRR4302535.3829459/94‑1 (MQ=60)
CTGGCGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGG > SRR4302535.3458343/1‑94 (MQ=60)
CGGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCATCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGA < SRR4302535.1795035/94‑1 (MQ=60)
GGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAA > SRR4302535.1925387/1‑94 (MQ=60)
GGTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAA > SRR4302535.1510592/1‑94 (MQ=60)
GTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAAT > SRR4302535.4633152/1‑94 (MQ=60)
GTACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTAGGCTGAAT < SRR4302535.1907936/94‑1 (MQ=60)
TACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATT < SRR4302535.1132349/94‑1 (MQ=60)
ACGATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTT > SRR4302535.1197770/1‑94 (MQ=60)
GATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTG < SRR4302535.3944913/94‑1 (MQ=60)
ATCAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGC > SRR4302535.821558/1‑94 (MQ=60)
CAGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTC < SRR4302535.3023166/94‑1 (MQ=60)
AGAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCA > SRR4302535.2200573/1‑94 (MQ=60)
GAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAG < SRR4302535.3980440/94‑1 (MQ=60)
GAGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAG < SRR4302535.3469580/94‑1 (MQ=60)
AGTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAGC > SRR4302535.2032576/1‑94 (MQ=60)
GTGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAGCA < SRR4302535.748535/94‑1 (MQ=60)
TGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAGCAG < SRR4302535.3819174/94‑1 (MQ=60)
TGCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAGCAG < SRR4302535.2777904/94‑1 (MQ=60)
GCGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAGCAGT < SRR4302535.1894884/94‑1 (MQ=60)
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GCCACGGTCGTTACGATCGCGCGGACCACGGTCATCACGGTCACGGAATTCACGTTTCGGACGCATCGGCGCATCTGGCGGTACGATCAGAGTACGTTCACCCTGTGCCATTTTCAGCAGTGCCGCAGCCAGAGTTTCGAGATCCAGCTCTTCACCTTCAGCAGTCGGCTGAATTTTGCTCAGCAGT > NC_000913/3304101‑3304287
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
