Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,305,090 |
C→T |
D155N (GAC→AAC) |
deaD ← |
inducible ATP‑independent RNA helicase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,305,090 | 0 | C | T | 99.7%
| 1061.0
/ NA
| 303 | D155N (GAC→AAC) | deaD | inducible ATP‑independent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (179/123); total (179/124) |
| Fisher's exact test for biased strand distribution p-value = 4.09e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 313 total aligned reads displayed.
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAG > NC_000913/3305001‑3305179
|
aTGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagc > 2:1706012/1‑93 (MQ=255)
tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca < 1:6550266/93‑1 (MQ=255)
tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca > 1:2918556/1‑93 (MQ=255)
tGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACAGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTcagca < 2:4673608/93‑1 (MQ=255)
aGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAc > 1:7379066/1‑93 (MQ=255)
cccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACgg < 1:3916421/93‑1 (MQ=255)
ccATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGc > 1:1325374/1‑93 (MQ=255)
cATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGcc < 2:2249870/93‑1 (MQ=255)
aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc < 2:4940978/93‑1 (MQ=255)
aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc > 2:3432773/1‑93 (MQ=255)
aTGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGccc > 1:5418004/1‑93 (MQ=255)
tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg > 1:6231168/1‑93 (MQ=255)
tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg > 2:376605/1‑93 (MQ=255)
tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg > 1:4816483/1‑93 (MQ=255)
tGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCg > 2:1634947/1‑93 (MQ=255)
cgcAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGa < 2:4561744/93‑1 (MQ=255)
cgcAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGa < 1:5256107/93‑1 (MQ=255)
cgcAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGa > 2:1400290/1‑93 (MQ=255)
cgcAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGa < 2:7862816/93‑1 (MQ=255)
gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAg > 1:4241618/1‑93 (MQ=255)
gcagcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAg > 1:6355410/1‑93 (MQ=255)
agcaTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTa > 2:7629238/1‑93 (MQ=255)
caTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAcc > 2:7361293/1‑93 (MQ=255)
aTTTCGTTACCTTCATCCAGAACCAGACTGCTCAGTTTAGAGAGGTCCAGAGAGACACGTTTCAGGTGGTTCAGAAGCCGGCCCAGACTACCg > 2:2933047/1‑93 (MQ=255)
aTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCg > 2:6468767/1‑93 (MQ=255)
aTTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCg < 1:1585924/93‑1 (MQ=255)
tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa > 1:1828266/1‑93 (MQ=255)
tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa < 1:5327759/93‑1 (MQ=255)
tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa < 2:4367992/93‑1 (MQ=255)
tttCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGCTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGa > 1:219667/1‑93 (MQ=255)
cGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACaa < 2:2520588/93‑1 (MQ=255)
aGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGAt < 2:3977821/93‑1 (MQ=255)
aGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGAt < 2:4221261/93‑1 (MQ=255)
aGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGCGGTTCAGCAGACGGCCCGGAGTACCGACAACGAt > 1:3080428/1‑93 (MQ=255)
gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc < 1:5830072/93‑1 (MQ=255)
gCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATc < 2:5345623/93‑1 (MQ=255)
cTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCt > 1:7635975/1‑93 (MQ=255)
ttCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCGGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTg < 2:5950952/93‑1 (MQ=255)
ttCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTg > 2:2608381/1‑93 (MQ=255)
tCATCCAGAGCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc < 2:5508679/93‑1 (MQ=255)
tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc > 1:1750152/1‑93 (MQ=255)
tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc < 2:630634/93‑1 (MQ=255)
tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc > 2:4069322/1‑93 (MQ=255)
tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc > 1:5540976/1‑93 (MQ=255)
tCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGc > 1:398450/1‑93 (MQ=255)
cATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCg < 1:5015683/93‑1 (MQ=255)
cATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGGGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCg > 1:5909975/1‑93 (MQ=255)
acccAGAGCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGCCAACGATCTGCgg < 2:315974/91‑1 (MQ=255)
tCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGc > 1:2679947/1‑93 (MQ=255)
tCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGc > 2:2353903/1‑93 (MQ=255)
ccAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGcc < 2:5165813/93‑1 (MQ=255)
cAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGccc < 2:5376530/93‑1 (MQ=255)
aGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGCGTACCGACAACGATCTGCGGaccc > 1:7335353/1‑93 (MQ=255)
gAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCt > 1:4351344/1‑93 (MQ=255)
gAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCt > 1:6484294/1‑93 (MQ=255)
gAACCAGACCGCTCAGTTTAGAGAGGGCCAGAGTGTCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGTccccg > 1:2363074/1‑92 (MQ=255)
aaCCAGACCGCTCAGATTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGGCCCTg > 1:7006543/1‑93 (MQ=255)
aCCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGa > 1:4613464/1‑93 (MQ=255)
cAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACg > 2:4533979/1‑93 (MQ=255)
aGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGc > 2:1012890/1‑93 (MQ=255)
gACCGTTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa > 2:5079322/1‑93 (MQ=255)
gACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa < 2:5606105/93‑1 (MQ=255)
gACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa < 2:2750230/93‑1 (MQ=255)
gACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCa < 1:376605/93‑1 (MQ=255)
ccGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAgg > 1:2080622/1‑93 (MQ=255)
cGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAggg > 2:7614778/1‑93 (MQ=255)
gCTCAGTTTAGAGAGGTCCGGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGgc > 2:1851101/1‑93 (MQ=255)
cAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGcgcg > 2:199289/1‑93 (MQ=255)
gTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTa > 1:3018871/1‑93 (MQ=255)
gTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTa > 1:75853/1‑93 (MQ=255)
tttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTaa > 1:5662386/1‑93 (MQ=255)
tttAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTaa < 2:7054663/93‑1 (MQ=255)
gagagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGc > 1:6616114/1‑93 (MQ=255)
gagGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCAc < 2:3635089/93‑1 (MQ=255)
ggTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGt > 1:4033594/1‑93 (MQ=255)
tCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa > 2:1445493/1‑93 (MQ=255)
tCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa > 1:4410639/1‑93 (MQ=255)
tCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa > 1:6980716/1‑93 (MQ=255)
gccAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCa < 2:5788321/92‑1 (MQ=255)
ccAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCAt < 2:6658173/93‑1 (MQ=255)
cAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATa > 2:6201176/1‑93 (MQ=255)
agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa > 2:3514825/1‑93 (MQ=255)
agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa < 1:7245481/93‑1 (MQ=255)
agagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATaa < 1:854769/93‑1 (MQ=255)
gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc < 1:1226924/93‑1 (MQ=255)
gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc > 2:5919885/1‑93 (MQ=255)
gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc < 1:5583665/93‑1 (MQ=255)
gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc < 2:3056020/93‑1 (MQ=255)
gagTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAc > 2:7033485/1‑93 (MQ=255)
gggCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc < 2:4823221/91‑1 (MQ=255)
gTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc < 2:5685622/93‑1 (MQ=255)
gTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGc < 2:5259293/93‑1 (MQ=255)
gCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTAATAACGCTg > 1:3577306/1‑93 (MQ=255)
cGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccg < 1:2775505/93‑1 (MQ=255)
gTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgc < 1:466401/93‑1 (MQ=255)
gTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgc > 1:1102791/1‑93 (MQ=255)
tttCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGgccgcc > 2:7173684/1‑93 (MQ=255)
cAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTa < 1:315466/93‑1 (MQ=255)
ggtggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACa > 2:2637132/1‑93 (MQ=255)
gtggtTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACag > 2:5440279/1‑93 (MQ=255)
|
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAG > NC_000913/3305001‑3305179
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTTCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAAC > NC_000913/3304997‑3305183
|
CTTCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTT > SRR4302543.6369067/1‑94 (MQ=60)
CTTCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTT > SRR4302543.5436120/1‑94 (MQ=60)
TTCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTC < SRR4302543.7886134/94‑1 (MQ=60)
TCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCA < SRR4302543.2336987/94‑1 (MQ=60)
CGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAG > SRR4302543.5414802/1‑94 (MQ=60)
CGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAG > SRR4302543.3468730/1‑94 (MQ=60)
CGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAG > SRR4302543.4004666/1‑94 (MQ=60)
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGC > SRR4302543.781295/1‑94 (MQ=60)
GATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGC < SRR4302543.2776528/94‑1 (MQ=60)
ATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCA < SRR4302543.3999330/94‑1 (MQ=60)
ATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCA > SRR4302543.3913734/1‑94 (MQ=60)
ATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCA > SRR4302543.2945079/1‑94 (MQ=60)
TGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAG < SRR4302543.6611919/94‑1 (MQ=60)
AAGCCCATGCGCAGCATTTTGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAC < SRR4302543.5528317/94‑1 (MQ=60)
AAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAC > SRR4302543.7449993/1‑94 (MQ=60)
AAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGAC < SRR4302543.4351297/94‑1 (MQ=60)
AGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACG > SRR4302543.63198/1‑94 (MQ=60)
AGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACG < SRR4302543.4179948/94‑1 (MQ=60)
AGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACG > SRR4302543.3103535/1‑94 (MQ=60)
GCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGG > SRR4302543.2133456/1‑94 (MQ=60)
CCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGC < SRR4302543.3950987/94‑1 (MQ=60)
CCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGC < SRR4302543.7684944/94‑1 (MQ=60)
CCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGC > SRR4302543.1337139/1‑94 (MQ=60)
CATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCC > SRR4302543.5467281/1‑94 (MQ=60)
CATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCC > SRR4302543.311895/1‑94 (MQ=60)
ATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCG > SRR4302543.698171/1‑94 (MQ=60)
ATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCG > SRR4302543.4860463/1‑94 (MQ=60)
ATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCG > SRR4302543.7533669/1‑94 (MQ=60)
ATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCG < SRR4302543.238687/94‑1 (MQ=60)
ATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCG > SRR4302543.6289981/1‑94 (MQ=60)
GCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGA > SRR4302543.7529520/1‑94 (MQ=60)
GCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGA > SRR4302543.2840879/1‑94 (MQ=60)
GCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGA < SRR4302543.565740/94‑1 (MQ=60)
CGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAG > SRR4302543.4280102/1‑94 (MQ=60)
CGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAG < SRR4302543.6010173/94‑1 (MQ=60)
CGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAG > SRR4302543.6415170/1‑94 (MQ=60)
CGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAG < SRR4302543.5303513/94‑1 (MQ=60)
CAGCATTTCGTCAGCTTCATCCAGAACCAGCCCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCCGACGGCCCGGAGTA > SRR4302543.2815816/1‑94 (MQ=60)
CAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTA < SRR4302543.1189508/94‑1 (MQ=60)
AGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTAC > SRR4302543.5123700/1‑94 (MQ=60)
GCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACC < SRR4302543.1706513/94‑1 (MQ=60)
ATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGA > SRR4302543.4716425/1‑94 (MQ=60)
ATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGA < SRR4302543.1600085/94‑1 (MQ=60)
ATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGA > SRR4302543.1844685/1‑94 (MQ=60)
ATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGCTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGA > SRR4302543.221563/1‑94 (MQ=60)
TTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGAC < SRR4302543.5375932/94‑1 (MQ=60)
TTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACA > SRR4302543.40800/1‑94 (MQ=60)
TCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAA > SRR4302543.1531164/1‑94 (MQ=60)
TCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAA < SRR4302543.3947249/94‑1 (MQ=60)
TCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAA > SRR4302543.1901702/1‑94 (MQ=60)
CAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCCCGTTTCAGGTGGTTCAGCGGACGGCCCGGCGTACCGACACCGAT > SRR4302543.559504/1‑94 (MQ=60)
CAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGCGGTTCAGCAGACGGCCCGGAGTACCGACAACGAT > SRR4302543.3108127/1‑94 (MQ=60)
AGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCTGACGGCCCGGAGTACCGACAACGATC < SRR4302543.1281799/94‑1 (MQ=60)
AGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATC < SRR4302543.4065640/94‑1 (MQ=60)
AGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATC > SRR4302543.4396061/1‑94 (MQ=60)
GCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCT < SRR4302543.5883097/94‑1 (MQ=60)
GCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCT > SRR4302543.7708421/1‑94 (MQ=60)
CTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTG > SRR4302543.5920439/1‑94 (MQ=60)
TTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGC > SRR4302543.1765785/1‑94 (MQ=60)
TTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGC < SRR4302543.6592596/94‑1 (MQ=60)
TTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGC > SRR4302543.5591357/1‑94 (MQ=60)
TTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGC > SRR4302543.402133/1‑94 (MQ=60)
TCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCG > SRR4302543.1842694/1‑94 (MQ=60)
TCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCG < SRR4302543.6633325/94‑1 (MQ=60)
TCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGGGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCG > SRR4302543.5963935/1‑94 (MQ=60)
CATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGG > SRR4302543.4062501/1‑94 (MQ=60)
CATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGG < SRR4302543.5061318/94‑1 (MQ=60)
CATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGG > SRR4302543.5737130/1‑94 (MQ=60)
ATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGC > SRR4302543.6593248/1‑94 (MQ=60)
ATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGC > SRR4302543.93166/1‑94 (MQ=60)
ATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGC > SRR4302543.4674145/1‑94 (MQ=60)
ATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGC > SRR4302543.2287140/1‑94 (MQ=60)
ATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGC > SRR4302543.2704235/1‑94 (MQ=60)
ATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGCGGTTCAGCAGACGGCCCGGAGCACCGACAACGATCTGCGGC > SRR4302543.2287141/1‑94 (MQ=60)
TCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCC < SRR4302543.5342583/94‑1 (MQ=60)
CAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGCGTACCGACAACGATCTGCGGACCC > SRR4302543.7405928/1‑94 (MQ=60)
AGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCT > SRR4302543.897486/1‑94 (MQ=60)
AGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCT > SRR4302543.6545388/1‑94 (MQ=60)
AGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCT > SRR4302543.6694920/1‑94 (MQ=60)
AGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCT < SRR4302543.7953703/94‑1 (MQ=60)
AGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCT > SRR4302543.4390786/1‑94 (MQ=60)
AGAACCAGACCGCTCAGTTTAGAGAGGGCCAGAGTGTCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGTCCCCG > SRR4302543.2384503/1‑94 (MQ=60)
GAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTG > SRR4302543.7073191/1‑94 (MQ=60)
GAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTG < SRR4302543.4535515/94‑1 (MQ=60)
GAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTG < SRR4302543.56122/94‑1 (MQ=60)
GAACCAGACCGCTCAGATTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGGCCCTG > SRR4302543.7073192/1‑94 (MQ=60)
AACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGA > SRR4302543.4655371/1‑94 (MQ=60)
ACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGAC > SRR4302543.5625419/1‑94 (MQ=60)
ACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGAC < SRR4302543.3688195/94‑1 (MQ=60)
GACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAG > SRR4302543.666445/1‑94 (MQ=60)
GACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAG < SRR4302543.380077/94‑1 (MQ=60)
GACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAG < SRR4302543.7435804/94‑1 (MQ=60)
ACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGG < SRR4302543.7323826/94‑1 (MQ=60)
ACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGG > SRR4302543.2099205/1‑94 (MQ=60)
CCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGG > SRR4302543.5307769/1‑94 (MQ=60)
CCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGG > SRR4302543.6346129/1‑94 (MQ=60)
CCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGG > SRR4302543.3296775/1‑94 (MQ=60)
CCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGG < SRR4302543.473319/94‑1 (MQ=60)
CCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGG > SRR4302543.6662241/1‑94 (MQ=60)
CGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGC < SRR4302543.206367/94‑1 (MQ=60)
CGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGC < SRR4302543.3165319/94‑1 (MQ=60)
CGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGC < SRR4302543.5466518/94‑1 (MQ=60)
CGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGC > SRR4302543.2343446/1‑94 (MQ=60)
CGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGC < SRR4302543.6525337/94‑1 (MQ=60)
GCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCG > SRR4302543.7774725/1‑94 (MQ=60)
CTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGC > SRR4302543.4316877/1‑94 (MQ=60)
AGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTA > SRR4302543.3046171/1‑94 (MQ=60)
AGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTA > SRR4302543.76547/1‑94 (MQ=60)
GTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAA > SRR4302543.5714033/1‑94 (MQ=60)
GTTTAGAGAGGTCAAGAGTGACACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAA < SRR4302543.1139821/94‑1 (MQ=60)
TTTAGAGAGGTCCAGAGTGCCACTTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAAT > SRR4302543.1378509/1‑94 (MQ=60)
TTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATT < SRR4302543.5687876/94‑1 (MQ=60)
TTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATT < SRR4302543.2444334/94‑1 (MQ=60)
TTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATT > SRR4302543.3055648/1‑94 (MQ=60)
AGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGC > SRR4302543.6678497/1‑94 (MQ=60)
AGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGC > SRR4302543.1726678/1‑94 (MQ=60)
AGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGC > SRR4302543.4556450/1‑94 (MQ=60)
AGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGC > SRR4302543.591990/1‑94 (MQ=60)
AGAGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCAC < SRR4302543.3020974/94‑1 (MQ=60)
AGGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGT > SRR4302543.4069668/1‑94 (MQ=60)
GGTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTC > SRR4302543.7267252/1‑94 (MQ=60)
GGTCCAGAGTGCCACGTTTCAGGTGGGTCAGCAGACGGCCCGGAGTACCGACAACGATCTGAGGCCCCTGACGCAGGGCGCGTAATTGCACGTC > SRR4302543.7267253/1‑94 (MQ=60)
GTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCA > SRR4302543.7046413/1‑94 (MQ=60)
GTCCAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCA > SRR4302543.4450616/1‑94 (MQ=60)
CAGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAA > SRR4302543.2216126/1‑94 (MQ=60)
AGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAC < SRR4302543.7315580/94‑1 (MQ=60)
AGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAC < SRR4302543.7695792/94‑1 (MQ=60)
AGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAC < SRR4302543.862372/94‑1 (MQ=60)
AGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAC < SRR4302543.5991265/94‑1 (MQ=60)
AGAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAAC < SRR4302543.646159/94‑1 (MQ=60)
GAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACG < SRR4302543.1237950/94‑1 (MQ=60)
GAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACG > SRR4302543.3027488/1‑94 (MQ=60)
GAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACG < SRR4302543.5634517/94‑1 (MQ=60)
GAGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACG < SRR4302543.1771669/94‑1 (MQ=60)
AGTGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGC > SRR4302543.4424118/1‑94 (MQ=60)
GTGCCACGTGTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCT < SRR4302543.5157515/94‑1 (MQ=60)
TGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTG < SRR4302543.2772284/94‑1 (MQ=60)
TGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTG < SRR4302543.5507386/94‑1 (MQ=60)
TGCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTAATAACGCTG > SRR4302543.3608914/1‑94 (MQ=60)
GCCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGG < SRR4302543.376617/94‑1 (MQ=60)
CCACGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGC > SRR4302543.1281023/1‑94 (MQ=60)
CGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGC > SRR4302543.1112732/1‑94 (MQ=60)
CGTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGC < SRR4302543.2800777/94‑1 (MQ=60)
CGTTTCAGGTGGGCCAGCAGACGGCCCGGAGTACAGACAAtgatgtgcagaacgtgactgagggacggcaatggcaactaataaagagcgaggc > SRR4302543.677843/1‑40 (MQ=54)
GTTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCC < SRR4302543.470740/94‑1 (MQ=60)
TTTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCG > SRR4302543.7445846/1‑94 (MQ=60)
TTCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGT > SRR4302543.3651497/1‑94 (MQ=60)
TCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTA < SRR4302543.7389513/94‑1 (MQ=60)
TCAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTA > SRR4302543.4658618/1‑94 (MQ=60)
CAGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTAC < SRR4302543.318316/94‑1 (MQ=60)
AGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACA < SRR4302543.495136/94‑1 (MQ=60)
AGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACA < SRR4302543.7058027/94‑1 (MQ=60)
AGGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACA > SRR4302543.4683969/1‑94 (MQ=60)
GGTGGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAG > SRR4302543.503829/1‑94 (MQ=60)
GGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGC > SRR4302543.6733232/1‑94 (MQ=60)
GGTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGC < SRR4302543.5784330/94‑1 (MQ=60)
GTTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCA > SRR4302543.5263453/1‑94 (MQ=60)
TTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAA > SRR4302543.4039849/1‑94 (MQ=60)
TTCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAA < SRR4302543.6657371/94‑1 (MQ=60)
TCAGCAGACGGCCCGGAGTGCCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAAC < SRR4302543.1127012/94‑1 (MQ=60)
TCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAAC < SRR4302543.220971/94‑1 (MQ=60)
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CTTCGATGAAGCCCATGCGCAGCATTTCGTCAGCTTCATCCAGAACCAGACCGCTCAGTTTAGAGAGGTCCAGAGTGCCACGTTTCAGGTGGTCCAGCAGACGGCCCGGAGTACCGACAACGATCTGCGGCCCCTGACGCAGGGCGCGTAATTGCACGTCATAACGCTGGCCGCCGTACAGAGCAAC > NC_000913/3304997‑3305183
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
